Cp4.1LG04g07450 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g07450
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	basic form of pathogenesis-related protein 1-like
Location	Cp4.1LG04: 4112169 .. 4112666 (-)
RNA-Seq Expression	Cp4.1LG04g07450
Synteny	Cp4.1LG04g07450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCCCAAACATTCTCAAAGCCATTTGCTTGTTGGGAATAGCCCTAACCCTAACTACCATAACTCCCACCATGGCCAATAGCAGCCCCAAGGACTTCGTCGACGCTCACAATGCCATCCGTGCGGAGGTTGGCATCGAGCCCGTCCAATGGAACGAAACATTGGCTACCTATGCTCAAAAGTACGCCGAATCAAAGATCGCCACTTGCGAAATGTCGCACTCTGGAGGACCCTACGGCGAAAACCTAGCGGTGGGATATGAAGGGATAACGGCGGAGACAGCCGTGAAGCTCTGGGCCGACGAGAAGAAACATTACGACCACGCTTCCAATTCGTGTGGAAACGACCCTACCCACTGCGTCCATTATAGACAGTTGGTTTGGAAGAATACCACATCTATTGGGTGCGCCCAAGTGAAGTGCCAAAACAATTGGATTTTTGTCATATGCTGTTATTACCCTTCGGCCGACAGTATTAAGCAACGTCCATACTAA

mRNA sequence

ATGGCCTCCCCAAACATTCTCAAAGCCATTTGCTTGTTGGGAATAGCCCTAACCCTAACTACCATAACTCCCACCATGGCCAATAGCAGCCCCAAGGACTTCGTCGACGCTCACAATGCCATCCGTGCGGAGGTTGGCATCGAGCCCGTCCAATGGAACGAAACATTGGCTACCTATGCTCAAAAGTACGCCGAATCAAAGATCGCCACTTGCGAAATGTCGCACTCTGGAGGACCCTACGGCGAAAACCTAGCGGTGGGATATGAAGGGATAACGGCGGAGACAGCCGTGAAGCTCTGGGCCGACGAGAAGAAACATTACGACCACGCTTCCAATTCGTGTGGAAACGACCCTACCCACTGCGTCCATTATAGACAGTTGGTTTGGAAGAATACCACATCTATTGGGTGCGCCCAAGTGAAGTGCCAAAACAATTGGATTTTTGTCATATGCTGTTATTACCCTTCGGCCGACAGTATTAAGCAACGTCCATACTAA

Coding sequence (CDS)

ATGGCCTCCCCAAACATTCTCAAAGCCATTTGCTTGTTGGGAATAGCCCTAACCCTAACTACCATAACTCCCACCATGGCCAATAGCAGCCCCAAGGACTTCGTCGACGCTCACAATGCCATCCGTGCGGAGGTTGGCATCGAGCCCGTCCAATGGAACGAAACATTGGCTACCTATGCTCAAAAGTACGCCGAATCAAAGATCGCCACTTGCGAAATGTCGCACTCTGGAGGACCCTACGGCGAAAACCTAGCGGTGGGATATGAAGGGATAACGGCGGAGACAGCCGTGAAGCTCTGGGCCGACGAGAAGAAACATTACGACCACGCTTCCAATTCGTGTGGAAACGACCCTACCCACTGCGTCCATTATAGACAGTTGGTTTGGAAGAATACCACATCTATTGGGTGCGCCCAAGTGAAGTGCCAAAACAATTGGATTTTTGTCATATGCTGTTATTACCCTTCGGCCGACAGTATTAAGCAACGTCCATACTAA

Protein sequence

MASPNILKAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYAQKYAESKIATCEMSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTHCVHYRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY

Homology

[Close]

BLAST of Cp4.1LG04g07450 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.8e-37
Identity = 68/144 (47.22%), Postives = 93/144 (64.58%), Query Frame = 0


Query: 22  ITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYAQKYAESKIATCEMSHSGGPYG 81
           I  + A +SP+D+++ HNA R +VG+ P+ W+  LA YAQ YA  +I  C M HS GPYG
Sbjct: 18  IHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPYG 77

Query: 82  ENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTHCVHYRQLVWKNTTSIGCAQVK 141
           ENLA  +  + A  AVK+W DEK+ YD+ SNSC      C HY Q+VW+N+  +GCA+V+
Sbjct: 78  ENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGV--CGHYTQVVWRNSVRLGCARVR 137

Query: 142 CQNNWIFVICCYYPSADSIKQRPY 166
             N W F+ C Y P  + I QRP+
Sbjct: 138 SNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Cp4.1LG04g07450 vs. ExPASy Swiss-Prot
Match: P35793 (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.9e-35
Identity = 71/161 (44.10%), Postives = 98/161 (60.87%), Query Frame = 0


Query: 8   KAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYAQKYAESK 67
           K + LL +A++   +  + A +SP+D+V  HNA RA VG+  V W+  L  +AQ YA  +
Sbjct: 5   KLVILLALAMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQR 64

Query: 68  IATCEMSHSGGPYGENLAVGYEGI--TAETAVKLWADEKKHYDHASNSCGNDPTHCVHYR 127
           I  C++ HSGGPYGEN+  G  G    A  AV  W  EKK YD+ SN+C      C HY 
Sbjct: 65  INDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKV-CGHYT 124

Query: 128 QLVWKNTTSIGCAQVKCQNN-WIFVICCYYPSADSIKQRPY 166
           Q+VW+ +TSIGCA+V C NN  +F+ C Y P  + + Q+PY
Sbjct: 125 QVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Cp4.1LG04g07450 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-34
Identity = 67/140 (47.86%), Postives = 90/140 (64.29%), Query Frame = 0


Query: 27  ANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYAQKYAESKIATCEMSHSGGPYGENLAV 86
           A +S +D++DAHN  RA+VG+EP+ W+  +A YAQ Y     A C + HS G YGENLA 
Sbjct: 30  AQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSHGQYGENLAQ 89

Query: 87  GY-EGITAETAVKLWADEKKHYDHASNSCGNDPTHCVHYRQLVWKNTTSIGCAQVKCQNN 146
           G  + +TA  AV++W DEK++YDH SN+C      C HY Q+VW+N+  +GCA+VKC N 
Sbjct: 90  GSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQV-CGHYTQVVWRNSVRVGCARVKCNNG 149

Query: 147 WIFVICCYYPSADSIKQRPY 166
              V C Y P  + I Q PY
Sbjct: 150 GYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of Cp4.1LG04g07450 vs. ExPASy Swiss-Prot
Match: Q05968 (Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 3.8e-34
Identity = 71/161 (44.10%), Postives = 96/161 (59.63%), Query Frame = 0


Query: 8   KAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYAQKYAESK 67
           K   LL +A+    +  + A +SP+D+V  HNA R+ VG+  V W+  L  +AQ YA  +
Sbjct: 5   KLAILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQR 64

Query: 68  IATCEMSHSGGPYGENLAVGYEGI--TAETAVKLWADEKKHYDHASNSCGNDPTHCVHYR 127
           I  C++ HSGGPYGEN+  G  G    A  AV  W  EKK YD+ SN+C      C HY 
Sbjct: 65  INDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKV-CGHYT 124

Query: 128 QLVWKNTTSIGCAQVKCQNN-WIFVICCYYPSADSIKQRPY 166
           Q+VW+ +TSIGCA+V C NN  +F+ C Y P  + I Q+PY
Sbjct: 125 QVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIIGQKPY 164

[Close]

BLAST of Cp4.1LG04g07450 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 8.5e-34
Identity = 65/140 (46.43%), Postives = 91/140 (65.00%), Query Frame = 0


Query: 27  ANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYAQKYAESKIATCEMSHSGGPYGENLAV 86
           A +S +D++DAHN  RA+VG+EP+ W++ +A YAQ YA    A C + HS G YGENLA 
Sbjct: 30  AQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQYGENLAE 89

Query: 87  GY-EGITAETAVKLWADEKKHYDHASNSCGNDPTHCVHYRQLVWKNTTSIGCAQVKCQNN 146
           G  + +TA  AV++W DEK++YDH SN+C      C HY Q+VW+N+  +GCA+V+C N 
Sbjct: 90  GSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQV-CGHYTQVVWRNSVRVGCARVQCNNG 149

Query: 147 WIFVICCYYPSADSIKQRPY 166
              V C Y P  +   + PY
Sbjct: 150 GYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of Cp4.1LG04g07450 vs. NCBI nr
Match: XP_023531881.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350 bits (899), Expect = 4.20e-122
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MASPNILKAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYA 60
           MASPNILKAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYA
Sbjct: 1   MASPNILKAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYA 60

Query: 61  QKYAESKIATCEMSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTH 120
           QKYAESKIATCEMSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTH
Sbjct: 61  QKYAESKIATCEMSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTH 120

Query: 121 CVHYRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY 165
           CVHYRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY
Sbjct: 121 CVHYRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY 165

[Close]

BLAST of Cp4.1LG04g07450 vs. NCBI nr
Match: XP_022927844.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >KAG6588724.1 hypothetical protein SDJN03_17289, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 338 bits (867), Expect = 3.19e-117
Identity = 157/165 (95.15%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 1   MASPNILKAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYA 60
           MASPNILKAICLLGIALTL+TITPTMANSSPKDFVDAHNAIRAEVGIEP++WNET+ATYA
Sbjct: 1   MASPNILKAICLLGIALTLSTITPTMANSSPKDFVDAHNAIRAEVGIEPLKWNETMATYA 60

Query: 61  QKYAESKIATCEMSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTH 120
           QKYAESKIATCEM+HSGGPYGENLAVGYEGITAETAVKLWADEKKHY+HASNSCGNDPTH
Sbjct: 61  QKYAESKIATCEMAHSGGPYGENLAVGYEGITAETAVKLWADEKKHYNHASNSCGNDPTH 120

Query: 121 CVHYRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY 165
           CVHYRQLVWKNTTSIGCAQV CQN+WIFVICCYYPSADSIKQRPY
Sbjct: 121 CVHYRQLVWKNTTSIGCAQVTCQNSWIFVICCYYPSADSIKQRPY 165

[Close]

BLAST of Cp4.1LG04g07450 vs. NCBI nr
Match: XP_022988978.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 337 bits (864), Expect = 9.16e-117
Identity = 156/165 (94.55%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 1   MASPNILKAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYA 60
           MASPNILK ICLLGIALTLTTITPTMANS+PKDFVDAHNAIRAEVG+EP++WNETLATYA
Sbjct: 1   MASPNILKPICLLGIALTLTTITPTMANSTPKDFVDAHNAIRAEVGVEPLKWNETLATYA 60

Query: 61  QKYAESKIATCEMSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTH 120
           QKYAESKI TCEM HSGGPYGENLAVGYEGITAETAVKLWADEKKHY+HASNSCGNDPTH
Sbjct: 61  QKYAESKITTCEMEHSGGPYGENLAVGYEGITAETAVKLWADEKKHYNHASNSCGNDPTH 120

Query: 121 CVHYRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY 165
           CVHYRQLVWKNTTSIGCAQV CQNNWIFVICCYYPSADSIKQRPY
Sbjct: 121 CVHYRQLVWKNTTSIGCAQVTCQNNWIFVICCYYPSADSIKQRPY 165

[Close]

BLAST of Cp4.1LG04g07450 vs. NCBI nr
Match: KAG6588723.1 (hypothetical protein SDJN03_17288, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 271 bits (693), Expect = 1.08e-90
Identity = 123/165 (74.55%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 1   MASPNILKAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYA 60
           MAS NIL A+CLLGIALTLTT+TPT A  SPKD+VDAHNAIRAEVG+EP+QWNETLATYA
Sbjct: 1   MASSNILSAVCLLGIALTLTTLTPTTAIISPKDYVDAHNAIRAEVGVEPLQWNETLATYA 60

Query: 61  QKYAESKIATCEMSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTH 120
           Q YAE+KIA+CEM HSGGPYGENLA GYE +TAE AVKLW DEKKHYD+ SN+C ND +H
Sbjct: 61  QNYAETKIASCEMVHSGGPYGENLAEGYEEMTAENAVKLWVDEKKHYDYDSNTCVNDSSH 120

Query: 121 CVHYRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY 165
           C+HY QLVWKNT S+GCA+V C NNW+F++C YYP  +   QRPY
Sbjct: 121 CLHYTQLVWKNTKSVGCAEVLCHNNWVFLVCNYYPPGNYDGQRPY 165

[Close]

BLAST of Cp4.1LG04g07450 vs. NCBI nr
Match: XP_022927709.1 (pathogenesis-related protein 1A-like [Cucurbita moschata])

HSP 1 Score: 268 bits (684), Expect = 3.58e-89
Identity = 121/165 (73.33%), Postives = 139/165 (84.24%), Query Frame = 0


Query: 1   MASPNILKAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYA 60
           MAS NIL A+C LGIALTLTT+ PT A  SPKD+VDAHNAIRAEVG+EP+QWNETLATYA
Sbjct: 11  MASSNILSAVCFLGIALTLTTLAPTTAIISPKDYVDAHNAIRAEVGVEPLQWNETLATYA 70

Query: 61  QKYAESKIATCEMSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTH 120
           Q YAE+KIA+CEM HSGGPYGENLA GYE +TAE AVKLW DEKKHYD+ SN+C ND +H
Sbjct: 71  QNYAETKIASCEMVHSGGPYGENLAEGYEEMTAENAVKLWVDEKKHYDYDSNTCVNDSSH 130

Query: 121 CVHYRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY 165
           C+HY QLVWKNT S+GCA+V C NNW+F++C YYP  +   QRPY
Sbjct: 131 CLHYTQLVWKNTESVGCAEVLCHNNWVFLVCNYYPPGNYDGQRPY 175

[Close]

BLAST of Cp4.1LG04g07450 vs. ExPASy TrEMBL
Match: A0A6J1EJ50 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111434611 PE=4 SV=1)

HSP 1 Score: 338 bits (867), Expect = 1.55e-117
Identity = 157/165 (95.15%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 1   MASPNILKAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYA 60
           MASPNILKAICLLGIALTL+TITPTMANSSPKDFVDAHNAIRAEVGIEP++WNET+ATYA
Sbjct: 1   MASPNILKAICLLGIALTLSTITPTMANSSPKDFVDAHNAIRAEVGIEPLKWNETMATYA 60

Query: 61  QKYAESKIATCEMSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTH 120
           QKYAESKIATCEM+HSGGPYGENLAVGYEGITAETAVKLWADEKKHY+HASNSCGNDPTH
Sbjct: 61  QKYAESKIATCEMAHSGGPYGENLAVGYEGITAETAVKLWADEKKHYNHASNSCGNDPTH 120

Query: 121 CVHYRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY 165
           CVHYRQLVWKNTTSIGCAQV CQN+WIFVICCYYPSADSIKQRPY
Sbjct: 121 CVHYRQLVWKNTTSIGCAQVTCQNSWIFVICCYYPSADSIKQRPY 165

[Close]

BLAST of Cp4.1LG04g07450 vs. ExPASy TrEMBL
Match: A0A6J1JNW9 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486179 PE=4 SV=1)

HSP 1 Score: 337 bits (864), Expect = 4.44e-117
Identity = 156/165 (94.55%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 1   MASPNILKAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYA 60
           MASPNILK ICLLGIALTLTTITPTMANS+PKDFVDAHNAIRAEVG+EP++WNETLATYA
Sbjct: 1   MASPNILKPICLLGIALTLTTITPTMANSTPKDFVDAHNAIRAEVGVEPLKWNETLATYA 60

Query: 61  QKYAESKIATCEMSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTH 120
           QKYAESKI TCEM HSGGPYGENLAVGYEGITAETAVKLWADEKKHY+HASNSCGNDPTH
Sbjct: 61  QKYAESKITTCEMEHSGGPYGENLAVGYEGITAETAVKLWADEKKHYNHASNSCGNDPTH 120

Query: 121 CVHYRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY 165
           CVHYRQLVWKNTTSIGCAQV CQNNWIFVICCYYPSADSIKQRPY
Sbjct: 121 CVHYRQLVWKNTTSIGCAQVTCQNNWIFVICCYYPSADSIKQRPY 165

[Close]

BLAST of Cp4.1LG04g07450 vs. ExPASy TrEMBL
Match: A0A6J1EIR8 (pathogenesis-related protein 1A-like OS=Cucurbita moschata OX=3662 GN=LOC111434528 PE=4 SV=1)

HSP 1 Score: 268 bits (684), Expect = 1.73e-89
Identity = 121/165 (73.33%), Postives = 139/165 (84.24%), Query Frame = 0


Query: 1   MASPNILKAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYA 60
           MAS NIL A+C LGIALTLTT+ PT A  SPKD+VDAHNAIRAEVG+EP+QWNETLATYA
Sbjct: 11  MASSNILSAVCFLGIALTLTTLAPTTAIISPKDYVDAHNAIRAEVGVEPLQWNETLATYA 70

Query: 61  QKYAESKIATCEMSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTH 120
           Q YAE+KIA+CEM HSGGPYGENLA GYE +TAE AVKLW DEKKHYD+ SN+C ND +H
Sbjct: 71  QNYAETKIASCEMVHSGGPYGENLAEGYEEMTAENAVKLWVDEKKHYDYDSNTCVNDSSH 130

Query: 121 CVHYRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY 165
           C+HY QLVWKNT S+GCA+V C NNW+F++C YYP  +   QRPY
Sbjct: 131 CLHYTQLVWKNTESVGCAEVLCHNNWVFLVCNYYPPGNYDGQRPY 175

[Close]

BLAST of Cp4.1LG04g07450 vs. ExPASy TrEMBL
Match: A0A5A7SPC2 (Basic form of pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001460 PE=4 SV=1)

HSP 1 Score: 250 bits (639), Expect = 8.84e-83
Identity = 110/165 (66.67%), Postives = 132/165 (80.00%), Query Frame = 0


Query: 1   MASPNILKAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYA 60
           M   NIL   CLLG+ LTL +  P +A S PK++VDAHNAIRAEVG++P+ WN TLA YA
Sbjct: 1   MGFANILSTFCLLGLTLTLASTAPILAKSYPKNYVDAHNAIRAEVGVDPLHWNSTLAAYA 60

Query: 61  QKYAESKIATCEMSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTH 120
           Q YA +KIATC+M HSGGPYGENLA GYE +TAE AV LWADEKKHYD+ SN+C ND ++
Sbjct: 61  QNYANTKIATCQMEHSGGPYGENLAEGYEEMTAEMAVSLWADEKKHYDYNSNTCTNDASN 120

Query: 121 CVHYRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY 165
           C+HY QLVW+NT S+GCA+VKCQNNW+F+IC YYP  + I QRPY
Sbjct: 121 CLHYTQLVWRNTKSVGCAEVKCQNNWVFLICSYYPPGNYIGQRPY 165

[Close]

BLAST of Cp4.1LG04g07450 vs. ExPASy TrEMBL
Match: A0A1S3C0S3 (basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495334 PE=4 SV=1)

HSP 1 Score: 250 bits (639), Expect = 8.84e-83
Identity = 110/165 (66.67%), Postives = 132/165 (80.00%), Query Frame = 0


Query: 1   MASPNILKAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYA 60
           M   NIL   CLLG+ LTL +  P +A S PK++VDAHNAIRAEVG++P+ WN TLA YA
Sbjct: 1   MGFANILSTFCLLGLTLTLASTAPILAKSYPKNYVDAHNAIRAEVGVDPLHWNSTLAAYA 60

Query: 61  QKYAESKIATCEMSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTH 120
           Q YA +KIATC+M HSGGPYGENLA GYE +TAE AV LWADEKKHYD+ SN+C ND ++
Sbjct: 61  QNYANTKIATCQMEHSGGPYGENLAEGYEEMTAEMAVSLWADEKKHYDYNSNTCTNDASN 120

Query: 121 CVHYRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY 165
           C+HY QLVW+NT S+GCA+VKCQNNW+F+IC YYP  + I QRPY
Sbjct: 121 CLHYTQLVWRNTKSVGCAEVKCQNNWVFLICSYYPPGNYIGQRPY 165

[Close]

BLAST of Cp4.1LG04g07450 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 149.1 bits (375), Expect = 3.2e-36
Identity = 70/151 (46.36%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 20  TTITPTMANSS----PKDFVDAHNAIRAEVGIEPVQWNETLATYAQKYAESKIATCEMSH 79
           T   P  AN++    P++ +  HN  RA VG+ P+ WNETLATYAQ YA  +   C M H
Sbjct: 27  TPAQPPKANANGDVKPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKH 86

Query: 80  SGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTHCVHYRQLVWKNTTSI 139
           S GP+GENLA G+  ++   A + W  EK++YD+ SN+CG D   C HY Q+VW+++  +
Sbjct: 87  SLGPFGENLAAGWGTMSGPVATEYWMTEKENYDYDSNTCGGDGV-CGHYTQIVWRDSVRL 146

Query: 140 GCAQVKCQNN-WIFVICCYYPSADSIKQRPY 166
           GCA V+C+N+ +I+VIC Y P  + I QRPY
Sbjct: 147 GCASVRCKNDEYIWVICSYDPPGNYIGQRPY 176

[Close]

BLAST of Cp4.1LG04g07450 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-34
Identity = 61/151 (40.40%), Postives = 93/151 (61.59%), Query Frame = 0


Query: 15  IALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYAQKYAESKIATCEMS 74
           +AL    + P+ A  SP+D++  HN  R  VG+ P+QW+E +A YA+ YAE     C + 
Sbjct: 14  VALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLI 73

Query: 75  HSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTHCVHYRQLVWKNTTS 134
           HSGGPYGENLA G   ++  +AV +W  EK +Y++A+N+C      C HY Q+VW+ +  
Sbjct: 74  HSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNG---VCGHYTQVVWRKSVR 133

Query: 135 IGCAQVKCQNNWIFVICCYYPSADSIKQRPY 166
           +GCA+V+C N    + C Y P  + + ++PY
Sbjct: 134 LGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cp4.1LG04g07450 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 3.9e-34
Identity = 68/162 (41.98%), Postives = 101/162 (62.35%), Query Frame = 0


Query: 5   NILKAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYAQKYA 64
           N  K   L+ +A++   +  T A ++P+D++++HN  RA+VG+  V W+ TLA YA  Y+
Sbjct: 2   NTFKTPFLVIVAISFLVVA-TNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYS 61

Query: 65  ESKIATCEMSHSGGPYGENLAVG-YEGITAETAVKLWADEKKHYDHASNSCGNDPTHCVH 124
             + A C + HS GPYGENLA G     +A +AVKLW DEK +Y +A N+C      C+H
Sbjct: 62  NFRKADCNLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNC-TGGKQCLH 121

Query: 125 YRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY 166
           Y Q+VW+++  IGCA+V+C N W FV C Y    + + + PY
Sbjct: 122 YTQVVWRDSVKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of Cp4.1LG04g07450 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 3.9e-34
Identity = 65/153 (42.48%), Postives = 90/153 (58.82%), Query Frame = 0


Query: 13  LGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYAQKYAESKIATCE 72
           L I   L  I    A  SP+DF+  HN  RAEVG+ P++W+E +A YA+ YA  +   C 
Sbjct: 12  LAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCA 71

Query: 73  MSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPTHCVHYRQLVWKNT 132
           M HS G YGEN+A     +T   AV +W DE+  YD+ SN+C  D   C HY Q+VW+N+
Sbjct: 72  MKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWD-KQCGHYTQVVWRNS 131

Query: 133 TSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY 166
             +GCA+V+C N   F+ C Y P  + + + PY
Sbjct: 132 ERLGCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Cp4.1LG04g07450 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-33
Identity = 65/163 (39.88%), Postives = 104/163 (63.80%), Query Frame = 0


Query: 5   NILKAICLLGIALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNETLATYAQKYA 64
           ++LK   L  +A+ L     ++A    + F++AHN  R EVG++P+ W++ +A YA  YA
Sbjct: 2   SLLKTNILFLLAIAL--FYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYA 61

Query: 65  ESKIATCEMSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSCGNDPT--HCV 124
             +I  C + HS GP+GEN+A+    ++AE A ++W +EK++YD+ SN+C NDP    C+
Sbjct: 62  NQRINDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTC-NDPNGGTCL 121

Query: 125 HYRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY 166
           HY Q+VWKNT  +GCA+V C +   F+ C Y P  + I ++P+
Sbjct: 122 HYTQVVWKNTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g07450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	4.8e-37	47.22	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P35793	5.9e-35	44.10	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
P07053	1.3e-34	47.86	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q05968	3.8e-34	44.10	Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
P08299	8.5e-34	46.43	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]

BLAST of Cp4.1LG04g07450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531881.1	4.20e-122	100.00	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022927844.1	3.19e-117	95.15	basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >KAG65887...	[more]
XP_022988978.1	9.16e-117	94.55	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]
KAG6588723.1	1.08e-90	74.55	hypothetical protein SDJN03_17288, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022927709.1	3.58e-89	73.33	pathogenesis-related protein 1A-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG04g07450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJ50	1.55e-117	95.15	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JNW9	4.44e-117	94.55	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1EIR8	1.73e-89	73.33	pathogenesis-related protein 1A-like OS=Cucurbita moschata OX=3662 GN=LOC1114345...	[more]
A0A5A7SPC2	8.84e-83	66.67	Basic form of pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3C0S3	8.84e-83	66.67	basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of Cp4.1LG04g07450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19990.1	3.2e-36	46.36	pathogenesis-related protein-1-like	[more]
AT2G14610.1	1.0e-34	40.40	pathogenesis-related gene 1	[more]
AT1G50060.1	3.9e-34	41.98	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G33720.1	3.9e-34	42.48	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT3G19690.1	1.1e-33	39.88	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 50..68 score: 34.9 coord: 148..161 score: 27.52 coord: 121..137 score: 49.72 coord: 96..109 score: 40.9
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 22..165
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 29..161 e-value: 1.4E-39 score: 147.5
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 35..153 e-value: 2.8E-24 score: 86.3
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 29..165 e-value: 8.4E-40 score: 138.3
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 27..165
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 22..165
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 31..165 e-value: 5.32788E-68 score: 200.938

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g07450.1	Cp4.1LG04g07450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005615	extracellular space