Cp4.1LG04g06150 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCTTGGTTCCAAGTTCCCTTCTATTGGGAATTCAGGCTTCTCATTCCCACCGAACAAGAACATTTTCTCAGATTACTGTCATGGGCCTTGTTTATTGTGACACTTGCTCCAACAACTCCTTCTCCAAACACAGTTACTTCTTATCAGGTAAGGCTCAATTTCATTTGAAGTCATGATTTCAACAACTTGAACATGAACTAGAATTCAAATGATGAAACTAGTATCTTCTTTTCAAGAGCAATGGTTTTTGTAGTTATGTTGTACGTTTGTTTGGACTTTAATCTTCTTCAGTATTTTGATACTGATTTTGAATTTGATTTTCAACTTCTTTTTCCTTTTCAAGAGCAATGGTTTTTGTAGTTATGTTGTCCGTTTGTTTAGACTTTAATCTTCTTCAGCATTTTCATACTGATTTTGAATTTGATTTTCAACTTCGTTGATACAATTTTCTAACCTAATTTCAATAAGAGCATTTGATTCAGCAATTCATTCAAAAGCAAGACTGATAAAATCGATACTCGTCGGTGCACTGCGTGTGTGTTTATGTATGAAAAAAATCAGGTGTAGAAGTTCGAATCAGCTGCAAATTCAAAGCAGAAACGCCGCGTACGGCGGAGCAGATAGCATTCTCAGTGAACAGAACAACAAACAAATACGGAGTTTACAGATTGGAAATACCTTCGGTGGACGGAATCCGATGCGCAGAGGATTCAGAGATAGCGTCGTTCTGCCAAGCCAGTTTGATCGGAAGTCCATCGTCGTCTTGCAACGTCCCTGGATACAGAACCACATCGGAAGAAATTTCGATCAAATCGAGAGAGGCAAACATTTGCATTTACAGCTTAAATCCGCTCAATTACAGGCCATCAGCTAGAGATGATACCTTGTGTGGAAAT CTTTCTTGGTTCCAAGTTCCCTTCTATTGGGAATTCAGGCTTCTCATTCCCACCGAACAAGAACATTTTCTCAGATTACTGTCATGGGCCTTGTTTATTGTGACACTTGCTCCAACAACTCCTTCTCCAAACACAGTTACTTCTTATCAGGTGTAGAAGTTCGAATCAGCTGCAAATTCAAAGCAGAAACGCCGCGTACGGCGGAGCAGATAGCATTCTCAGTGAACAGAACAACAAACAAATACGGAGTTTACAGATTGGAAATACCTTCGGTGGACGGAATCCGATGCGCAGAGGATTCAGAGATAGCGTCGTTCTGCCAAGCCAGTTTGATCGGAAGTCCATCGTCGTCTTGCAACGTCCCTGGATACAGAACCACATCGGAAGAAATTTCGATCAAATCGAGAGAGGCAAACATTTGCATTTACAGCTTAAATCCGCTCAATTACAGGCCATCAGCTAGAGATGATACCTTGTGTGGAAAT ATGGGCCTTGTTTATTGTGACACTTGCTCCAACAACTCCTTCTCCAAACACAGTTACTTCTTATCAGGTGTAGAAGTTCGAATCAGCTGCAAATTCAAAGCAGAAACGCCGCGTACGGCGGAGCAGATAGCATTCTCAGTGAACAGAACAACAAACAAATACGGAGTTTACAGATTGGAAATACCTTCGGTGGACGGAATCCGATGCGCAGAGGATTCAGAGATAGCGTCGTTCTGCCAAGCCAGTTTGATCGGAAGTCCATCGTCGTCTTGCAACGTCCCTGGATACAGAACCACATCGGAAGAAATTTCGATCAAATCGAGAGAGGCAAACATTTGCATTTACAGCTTAAATCCGCTCAATTACAGGCCATCAGCTAGAGATGATACCTTGTGTGGAAAT MGLVYCDTCSNNSFSKHSYFLSGVEVRISCKFKAETPRTAEQIAFSVNRTTNKYGVYRLEIPSVDGIRCAEDSEIASFCQASLIGSPSSSCNVPGYRTTSEEISIKSREANICIYSLNPLNYRPSARDDTLCGN Homology
BLAST of Cp4.1LG04g06150 vs. ExPASy Swiss-Prot
Match: Q6NMJ2 (Pollen-specific protein-like At4g18596 OS=Arabidopsis thaliana OX=3702 GN=At4g18596 PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 4.0e-05 Identity = 35/126 (27.78%), Postives = 58/126 (46.03%), Query Frame = 0
BLAST of Cp4.1LG04g06150 vs. NCBI nr
Match: XP_022928243.1 (pollen-specific protein-like At4g18596 [Cucurbita moschata] >XP_023530922.1 pollen-specific protein-like At4g18596 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023530923.1 pollen-specific protein-like At4g18596 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023530924.1 pollen-specific protein-like At4g18596 [Cucurbita pepo subsp. pepo] >KAG7022648.1 Pollen-specific protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 273 bits (699), Expect = 4.57e-92 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g06150 vs. NCBI nr
Match: XP_022989732.1 (pollen-specific protein-like At4g18596 [Cucurbita maxima]) HSP 1 Score: 271 bits (693), Expect = 3.76e-91 Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0
BLAST of Cp4.1LG04g06150 vs. NCBI nr
Match: KAG6588884.1 (Glutaredoxin-C1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 273 bits (699), Expect = 3.73e-89 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g06150 vs. NCBI nr
Match: XP_022156533.1 (major pollen allergen Ole e 1 [Momordica charantia]) HSP 1 Score: 251 bits (640), Expect = 4.50e-83 Identity = 121/134 (90.30%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of Cp4.1LG04g06150 vs. NCBI nr
Match: XP_038896993.1 (major pollen allergen Ole e 1-like [Benincasa hispida]) HSP 1 Score: 248 bits (634), Expect = 3.70e-82 Identity = 118/134 (88.06%), Postives = 127/134 (94.78%), Query Frame = 0
BLAST of Cp4.1LG04g06150 vs. ExPASy TrEMBL
Match: A0A6J1ENF6 (pollen-specific protein-like At4g18596 OS=Cucurbita moschata OX=3662 GN=LOC111435137 PE=4 SV=1) HSP 1 Score: 273 bits (699), Expect = 2.21e-92 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g06150 vs. ExPASy TrEMBL
Match: A0A6J1JGM9 (pollen-specific protein-like At4g18596 OS=Cucurbita maxima OX=3661 GN=LOC111486731 PE=4 SV=1) HSP 1 Score: 271 bits (693), Expect = 1.82e-91 Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0
BLAST of Cp4.1LG04g06150 vs. ExPASy TrEMBL
Match: A0A6J1DQW0 (major pollen allergen Ole e 1 OS=Momordica charantia OX=3673 GN=LOC111023412 PE=4 SV=1) HSP 1 Score: 251 bits (640), Expect = 2.18e-83 Identity = 121/134 (90.30%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of Cp4.1LG04g06150 vs. ExPASy TrEMBL
Match: A0A0A0LDJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G563290 PE=4 SV=1) HSP 1 Score: 246 bits (628), Expect = 1.52e-81 Identity = 118/134 (88.06%), Postives = 125/134 (93.28%), Query Frame = 0
BLAST of Cp4.1LG04g06150 vs. ExPASy TrEMBL
Match: A0A1S3BPJ6 (major pollen allergen Ole e 1-like OS=Cucumis melo OX=3656 GN=LOC103491809 PE=4 SV=1) HSP 1 Score: 245 bits (625), Expect = 4.36e-81 Identity = 117/134 (87.31%), Postives = 125/134 (93.28%), Query Frame = 0
BLAST of Cp4.1LG04g06150 vs. TAIR 10
Match: AT3G26960.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 168.3 bits (425), Expect = 4.2e-42 Identity = 79/136 (58.09%), Postives = 101/136 (74.26%), Query Frame = 0
BLAST of Cp4.1LG04g06150 vs. TAIR 10
Match: AT5G41050.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 165.6 bits (418), Expect = 2.7e-41 Identity = 78/137 (56.93%), Postives = 102/137 (74.45%), Query Frame = 0
BLAST of Cp4.1LG04g06150 vs. TAIR 10
Match: AT5G13140.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 161.4 bits (407), Expect = 5.1e-40 Identity = 71/137 (51.82%), Postives = 104/137 (75.91%), Query Frame = 0
BLAST of Cp4.1LG04g06150 vs. TAIR 10
Match: AT4G18596.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 49.3 bits (116), Expect = 2.8e-06 Identity = 35/126 (27.78%), Postives = 58/126 (46.03%), Query Frame = 0
BLAST of Cp4.1LG04g06150 vs. TAIR 10
Match: AT5G45880.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 49.3 bits (116), Expect = 2.8e-06 Identity = 35/126 (27.78%), Postives = 58/126 (46.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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