Homology
BLAST of Cp4.1LG04g03350 vs. ExPASy Swiss-Prot
Match:
Q9LR69 (Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E4 PE=2 SV=1)
HSP 1 Score: 447.2 bits (1149), Expect = 2.1e-124
Identity = 222/372 (59.68%), Postives = 276/372 (74.19%), Query Frame = 0
Query: 3 LFIKRHCRSFTSQNL--KNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 62
+ +KRH S L S+ PTK+S+IL+ C L +A+ LNS S +
Sbjct: 4 IILKRHFSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPK- 63
Query: 63 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 122
LYASLLQTC KV SF HG Q HAHV+KSGLE DR VGNSLLSLYFKLG R TRRVFDG
Sbjct: 64 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 123
Query: 123 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 182
FVKD +SWTSM++ YV + A+E+F +M+ G++ N FTLS+ +KACSE+G + LG
Sbjct: 124 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 183
Query: 183 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 242
RCFHG+V+ HGF NH I S+L +YG N DAR++FDEMPEPD ICWT+V+SA ++N
Sbjct: 184 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 243
Query: 243 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 302
DLYE+ALG FY M R L PDG TFG+VLTAC NL RL+QG+E+H K+I +G+G NVVV
Sbjct: 244 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 303
Query: 303 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 362
ESSL+DMYGKCG+V ++++VF+ MSK+NSVSWSALLG YCQNG+ EK I IFR ME+ DL
Sbjct: 304 ESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL 363
Query: 363 YSFGTVIRACAG 373
Y FGTV++ACAG
Sbjct: 364 YCFGTVLKACAG 374
BLAST of Cp4.1LG04g03350 vs. ExPASy Swiss-Prot
Match:
Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)
HSP 1 Score: 205.7 bits (522), Expect = 1.1e-51
Identity = 135/409 (33.01%), Postives = 214/409 (52.32%), Query Frame = 0
Query: 27 ESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSILYASLLQTCTKVASFTHGRQIHAHVL 86
E + L+F +DLL + N L+ ++ Y +LL+ CT GR +HAH+L
Sbjct: 31 EDESLKFPSNDLL--LRTSSNDLEGSYIPADRR-FYNTLLKKCTVFKLLIQGRIVHAHIL 90
Query: 87 KSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAI 146
+S D +GN+LL++Y K GS R+VF+ + +D V+WT++I+ Y + +P +A+
Sbjct: 91 QSIFRHDIVMGNTLLNMYAKCGS-LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDAL 150
Query: 147 ELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMY 206
F ML G PN FTLS+VIKA + G HG V+ GF+SN + S+L+D+Y
Sbjct: 151 LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 210
Query: 207 GRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTF 266
R DA+ +FD + + + W ++I+ R E AL F MLR P F++
Sbjct: 211 TRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD-GFRPSHFSY 270
Query: 267 GSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSK 326
S+ AC++ G L QG+ VHA +I G ++L+DMY K G++ ++++FDR++K
Sbjct: 271 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK 330
Query: 327 RNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL----YSFGTVIRACA-----GYCFHA 386
R+ VSW++LL Y Q+G ++ + F M ++ + SF +V+ AC+ +H
Sbjct: 331 RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 390
Query: 387 RPKMKNSHEKPATKHIENVPTWSKRLLDAINRDYRKFVNFPWRLSVAIF 427
MK P H V R D +NR R P + AI+
Sbjct: 391 YELMKKDGIVPEAWHYVTVVDLLGRAGD-LNRALRFIEEMPIEPTAAIW 433
BLAST of Cp4.1LG04g03350 vs. ExPASy Swiss-Prot
Match:
O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)
HSP 1 Score: 202.6 bits (514), Expect = 8.9e-51
Identity = 116/349 (33.24%), Postives = 194/349 (55.59%), Query Frame = 0
Query: 28 SQILQFCGSDLLHDALHTLNSLDSFDSTTNKSILYASLLQTCTKVASFTHGRQIHAHVLK 87
+ I +C S +AL N L + DS T SLL CT+ F G IH++ +K
Sbjct: 221 AMISGYCQSGNAKEALTLSNGLRAMDSVT-----VVSLLSACTEAGDFNRGVTIHSYSIK 280
Query: 88 SGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIE 147
GLE++ FV N L+ LY + G R ++VFD ++V+D++SW S+I +Y +P AI
Sbjct: 281 HGLESELFVSNKLIDLYAEFGR-LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 340
Query: 148 LFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHG-FNSNHVIVSSLIDMY 207
LF +M I+P+ TL ++ S++G++ R G +R G F + I ++++ MY
Sbjct: 341 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 400
Query: 208 GRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTF 267
+ AR +F+ +P D I W ++IS +N +A+ + +M ++ + T+
Sbjct: 401 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 460
Query: 268 GSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSK 327
SVL AC+ G LRQG ++H +++ +GL +V V +SL DMYGKCG +E + +F ++ +
Sbjct: 461 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 520
Query: 328 RNSVSWSALLGVYCQNGDFEKVINIFRGM----EKIDLYSFGTVIRACA 372
NSV W+ L+ + +G EK + +F+ M K D +F T++ AC+
Sbjct: 521 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS 563
BLAST of Cp4.1LG04g03350 vs. ExPASy Swiss-Prot
Match:
Q0WNP3 (Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A2 PE=1 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 7.6e-50
Identity = 106/311 (34.08%), Postives = 176/311 (56.59%), Query Frame = 0
Query: 64 SLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDGLFV 123
S+L+ C++ + GRQ+H+ V+K ++ D FVG SL+ +Y K G + R+VFDG+
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCG-EISDCRKVFDGMSN 348
Query: 124 KDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCF 183
++ V+WTS+I ++ REG AI LF M + N T+ ++++AC +G L+LG+
Sbjct: 349 RNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKEL 408
Query: 184 HGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLY 243
H ++++ N I S+L+ +Y + S DA + ++P D + WT++IS +
Sbjct: 409 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHE 468
Query: 244 EDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESS 303
+AL F M++ + P+ FT+ S L ACAN L G +H+ + NV V S+
Sbjct: 469 SEALDFLKEMIQE-GVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA 528
Query: 304 LVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGME----KID 363
L+ MY KCG V ++ RVFD M ++N VSW A++ Y +NG + + + ME ++D
Sbjct: 529 LIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVD 588
Query: 364 LYSFGTVIRAC 371
Y F T++ C
Sbjct: 589 DYIFATILSTC 597
BLAST of Cp4.1LG04g03350 vs. ExPASy Swiss-Prot
Match:
Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)
HSP 1 Score: 197.6 bits (501), Expect = 2.9e-49
Identity = 105/350 (30.00%), Postives = 190/350 (54.29%), Query Frame = 0
Query: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKL---GSDFRL---- 120
++ S+L++CT + G +H +++ G++ D + GN+L+++Y KL GS +
Sbjct: 107 VFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVF 166
Query: 121 ----------------------------TRRVFDGLFVKDVVSWTSMITSYVREGKPGNA 180
RRVF+ + KDVVS+ ++I Y + G +A
Sbjct: 167 DEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDA 226
Query: 181 IELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDM 240
+ + +M ++P+ FTLS+V+ SE +++ G+ HG V+R G +S+ I SSL+DM
Sbjct: 227 LRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDM 286
Query: 241 YGRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFT 300
Y ++ D+ ++F + D I W S+++ +N Y +AL F M+ T + P
Sbjct: 287 YAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMV-TAKVKPGAVA 346
Query: 301 FGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMS 360
F SV+ ACA+L L G+++H V+ G G N+ + S+LVDMY KCG ++ ++++FDRM+
Sbjct: 347 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 406
Query: 361 KRNSVSWSALLGVYCQNGDFEKVINIFRGME----KIDLYSFGTVIRACA 372
+ VSW+A++ + +G + +++F M+ K + +F V+ AC+
Sbjct: 407 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACS 455
BLAST of Cp4.1LG04g03350 vs. NCBI nr
Match:
XP_023529479.1 (pentatricopeptide repeat-containing protein At1g03540 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 753 bits (1943), Expect = 1.21e-269
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0
Query: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60
MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI
Sbjct: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60
Query: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG
Sbjct: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG
Sbjct: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN
Sbjct: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV
Sbjct: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL
Sbjct: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
Query: 361 YSFGTVIRACAG 372
YSFGTVIRACAG
Sbjct: 361 YSFGTVIRACAG 372
BLAST of Cp4.1LG04g03350 vs. NCBI nr
Match:
KAG6589200.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 746 bits (1925), Expect = 6.60e-267
Identity = 369/372 (99.19%), Postives = 370/372 (99.46%), Query Frame = 0
Query: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60
MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGS LLHDALHTLNSLDSFDSTTNKSI
Sbjct: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDALHTLNSLDSFDSTTNKSI 60
Query: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
LYASLLQTCTKVASF+HGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSD RLTRRVFDG
Sbjct: 61 LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG
Sbjct: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN
Sbjct: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV
Sbjct: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL
Sbjct: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
Query: 361 YSFGTVIRACAG 372
YSFGTVIRACAG
Sbjct: 361 YSFGTVIRACAG 372
BLAST of Cp4.1LG04g03350 vs. NCBI nr
Match:
KAG7022900.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 742 bits (1916), Expect = 1.54e-265
Identity = 367/372 (98.66%), Postives = 369/372 (99.19%), Query Frame = 0
Query: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60
MRL IKRHCRSFTSQNLKNSTHPPTKESQILQFCGS LLHDA+HTLNSLDSFDSTTNKSI
Sbjct: 1 MRLIIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDAVHTLNSLDSFDSTTNKSI 60
Query: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
LYASLLQTCTKVASF+HGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSD RLTRRVFDG
Sbjct: 61 LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG
Sbjct: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN
Sbjct: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV
Sbjct: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL
Sbjct: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
Query: 361 YSFGTVIRACAG 372
YSFGTVIRACAG
Sbjct: 361 YSFGTVIRACAG 372
BLAST of Cp4.1LG04g03350 vs. NCBI nr
Match:
XP_022988714.1 (pentatricopeptide repeat-containing protein At1g03540 [Cucurbita maxima])
HSP 1 Score: 740 bits (1910), Expect = 1.26e-264
Identity = 364/372 (97.85%), Postives = 368/372 (98.92%), Query Frame = 0
Query: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60
MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGS LLHDALHTLNSLDSF+STTNKSI
Sbjct: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDALHTLNSLDSFNSTTNKSI 60
Query: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
LYASLLQTCTKVASF+HGRQIHAHVLKSGLE DRFVGNSLLSLYFKLGSDFRLTRRVFDG
Sbjct: 61 LYASLLQTCTKVASFSHGRQIHAHVLKSGLETDRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDVVSWTSMITSYVREGKPGNAIE FWDMLDLGIEPNGFTLSAVIKACSEIGNL+LG
Sbjct: 121 LFVKDVVSWTSMITSYVREGKPGNAIEFFWDMLDLGIEPNGFTLSAVIKACSEIGNLILG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN
Sbjct: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV
Sbjct: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCGA+EKSQ VFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL
Sbjct: 301 ESSLVDMYGKCGAIEKSQLVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
Query: 361 YSFGTVIRACAG 372
YSFGTVIRACAG
Sbjct: 361 YSFGTVIRACAG 372
BLAST of Cp4.1LG04g03350 vs. NCBI nr
Match:
XP_022930613.1 (pentatricopeptide repeat-containing protein At1g03540 [Cucurbita moschata])
HSP 1 Score: 738 bits (1906), Expect = 5.12e-264
Identity = 365/372 (98.12%), Postives = 368/372 (98.92%), Query Frame = 0
Query: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60
MRL IKRHCRSFTSQNLKNSTHPPTK+SQILQFCGS LL+DALHTLNSLDSFDSTTNKSI
Sbjct: 1 MRLIIKRHCRSFTSQNLKNSTHPPTKQSQILQFCGSGLLYDALHTLNSLDSFDSTTNKSI 60
Query: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
LYASLLQTCTKVASF+HGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSD RLTRRVFDG
Sbjct: 61 LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG
Sbjct: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN
Sbjct: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVI HGLGGNVVV
Sbjct: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIVHGLGGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL
Sbjct: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
Query: 361 YSFGTVIRACAG 372
YSFGTVIRACAG
Sbjct: 361 YSFGTVIRACAG 372
BLAST of Cp4.1LG04g03350 vs. ExPASy TrEMBL
Match:
A0A6J1JMC8 (pentatricopeptide repeat-containing protein At1g03540 OS=Cucurbita maxima OX=3661 GN=LOC111485968 PE=4 SV=1)
HSP 1 Score: 740 bits (1910), Expect = 6.10e-265
Identity = 364/372 (97.85%), Postives = 368/372 (98.92%), Query Frame = 0
Query: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60
MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGS LLHDALHTLNSLDSF+STTNKSI
Sbjct: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSGLLHDALHTLNSLDSFNSTTNKSI 60
Query: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
LYASLLQTCTKVASF+HGRQIHAHVLKSGLE DRFVGNSLLSLYFKLGSDFRLTRRVFDG
Sbjct: 61 LYASLLQTCTKVASFSHGRQIHAHVLKSGLETDRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDVVSWTSMITSYVREGKPGNAIE FWDMLDLGIEPNGFTLSAVIKACSEIGNL+LG
Sbjct: 121 LFVKDVVSWTSMITSYVREGKPGNAIEFFWDMLDLGIEPNGFTLSAVIKACSEIGNLILG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN
Sbjct: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV
Sbjct: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCGA+EKSQ VFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL
Sbjct: 301 ESSLVDMYGKCGAIEKSQLVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
Query: 361 YSFGTVIRACAG 372
YSFGTVIRACAG
Sbjct: 361 YSFGTVIRACAG 372
BLAST of Cp4.1LG04g03350 vs. ExPASy TrEMBL
Match:
A0A6J1EVR7 (pentatricopeptide repeat-containing protein At1g03540 OS=Cucurbita moschata OX=3662 GN=LOC111437022 PE=4 SV=1)
HSP 1 Score: 738 bits (1906), Expect = 2.48e-264
Identity = 365/372 (98.12%), Postives = 368/372 (98.92%), Query Frame = 0
Query: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60
MRL IKRHCRSFTSQNLKNSTHPPTK+SQILQFCGS LL+DALHTLNSLDSFDSTTNKSI
Sbjct: 1 MRLIIKRHCRSFTSQNLKNSTHPPTKQSQILQFCGSGLLYDALHTLNSLDSFDSTTNKSI 60
Query: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
LYASLLQTCTKVASF+HGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSD RLTRRVFDG
Sbjct: 61 LYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDVRLTRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG
Sbjct: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN
Sbjct: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVI HGLGGNVVV
Sbjct: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIVHGLGGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL
Sbjct: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
Query: 361 YSFGTVIRACAG 372
YSFGTVIRACAG
Sbjct: 361 YSFGTVIRACAG 372
BLAST of Cp4.1LG04g03350 vs. ExPASy TrEMBL
Match:
A0A6J1D3F1 (pentatricopeptide repeat-containing protein At1g03540 OS=Momordica charantia OX=3673 GN=LOC111016671 PE=4 SV=1)
HSP 1 Score: 661 bits (1705), Expect = 8.86e-234
Identity = 324/372 (87.10%), Postives = 343/372 (92.20%), Query Frame = 0
Query: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60
MRLF KRHC SFT NLKN T+ TK SQ+LQ C S LLHDALH LNS+D FD+ TNK I
Sbjct: 1 MRLFFKRHCSSFTFHNLKNFTYASTKGSQVLQHCRSGLLHDALHILNSVDLFDTATNKPI 60
Query: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
LYASLLQTC KVASF+HGRQIHAHV+KSGLE DRFVGNSLLSLYFKLGSD+ LTRRVFDG
Sbjct: 61 LYASLLQTCIKVASFSHGRQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDYLLTRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDVVSWTSMIT YVREGKPGNAIELFWDMLDLGIEPNGFT+SAVIKACSEIGNLVLG
Sbjct: 121 LFVKDVVSWTSMITGYVREGKPGNAIELFWDMLDLGIEPNGFTISAVIKACSEIGNLVLG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
RCFHGLV+RHGF+SNHVIVSSLIDMYGRN AS+DARQLFDE+ EPDAICWTSVISA TRN
Sbjct: 181 RCFHGLVLRHGFDSNHVIVSSLIDMYGRNCASNDARQLFDELLEPDAICWTSVISAFTRN 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DLYE+ALGFFY M RTY LSPDGFTFG+VLTAC NLGRLRQGEEVHAKVIAHGLGGNVVV
Sbjct: 241 DLYEEALGFFYSMQRTYRLSPDGFTFGTVLTACGNLGRLRQGEEVHAKVIAHGLGGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCGAV+KSQ VFDRMS+RNSVSWSALLGVYCQNGDFE VIN+FR ME++DL
Sbjct: 301 ESSLVDMYGKCGAVDKSQLVFDRMSRRNSVSWSALLGVYCQNGDFEMVINLFREMEEVDL 360
Query: 361 YSFGTVIRACAG 372
YSFGTVIRACAG
Sbjct: 361 YSFGTVIRACAG 372
BLAST of Cp4.1LG04g03350 vs. ExPASy TrEMBL
Match:
A0A0A0K5P0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047230 PE=4 SV=1)
HSP 1 Score: 605 bits (1560), Expect = 9.87e-212
Identity = 299/373 (80.16%), Postives = 324/373 (86.86%), Query Frame = 0
Query: 1 MRLFIKRHCRS-FTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKS 60
M LF+KRHC S FTSQN K STHP K SQILQFC S LL+DALH LNS+D +DS NK
Sbjct: 1 MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60
Query: 61 ILYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFD 120
+LYASLLQTC KV SFT GRQ HAHV+KSGLE DRFVGNSLLSLYFKLGSD LTRRVFD
Sbjct: 61 LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120
Query: 121 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVL 180
GLFVKDVVSW SMIT YVREGK G AIELFWDMLD GIEPNGFTLSAVIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180
Query: 181 GRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTR 240
G+CFHG+VVR GF+SN VI+SSLIDMYGRN SSDARQLFDE+ EPD +CWT+VISA TR
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240
Query: 241 NDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVV 300
NDLYE+ALGFFYL R + L PD +TFGSVLTAC NLGRLRQGEE+HAKVIA+G GNVV
Sbjct: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300
Query: 301 VESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKID 360
ESSLVDMYGKCGAVEKSQR+FDRMS RNSVSWSALL VYC NGD+EK +N+FR M+++D
Sbjct: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360
Query: 361 LYSFGTVIRACAG 372
LYSFGTVIRACAG
Sbjct: 361 LYSFGTVIRACAG 373
BLAST of Cp4.1LG04g03350 vs. ExPASy TrEMBL
Match:
A0A5A7SR37 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003650 PE=4 SV=1)
HSP 1 Score: 602 bits (1551), Expect = 3.23e-210
Identity = 298/373 (79.89%), Postives = 325/373 (87.13%), Query Frame = 0
Query: 1 MRLFIKRHCRS-FTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKS 60
M LF KRHC S FTSQN K STH K QILQFC S LL+DALH LNS+D +DS NK
Sbjct: 1 MMLFFKRHCTSSFTSQNFKYSTHLSNKLFQILQFCKSGLLNDALHILNSVDLYDSRINKP 60
Query: 61 ILYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFD 120
+LYASLLQTCTKV SF+ G Q HAHV+KSGLE DRFVGNSLLSLYFKLGS+ LTRRVFD
Sbjct: 61 LLYASLLQTCTKVDSFSSGCQFHAHVVKSGLETDRFVGNSLLSLYFKLGSNCLLTRRVFD 120
Query: 121 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVL 180
GLFVKDVVSW SMIT YVREGK G AIELFWDMLD GIEPN FTLS VIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGMAIELFWDMLDSGIEPNDFTLSTVIKACSEIGNLVL 180
Query: 181 GRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTR 240
G+CFHG+VVR GF+SN VI+SSLIDMYGRN+ SS+ARQLFDE+ EPD +CWT+VISA TR
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNYLSSEARQLFDELLEPDPVCWTTVISAFTR 240
Query: 241 NDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVV 300
ND YE+ALGFFYLM R Y LSPD +TFGSVLTAC NLGRL+QGEE+HAKVIA+G GGNVV
Sbjct: 241 NDFYEEALGFFYLMHRAYRLSPDNYTFGSVLTACGNLGRLKQGEEIHAKVIAYGFGGNVV 300
Query: 301 VESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKID 360
VESSLVDMYGKCGAVEKSQRVFDRMS RNSVSWSALL VYCQNGDFEKV+++FR M+K+D
Sbjct: 301 VESSLVDMYGKCGAVEKSQRVFDRMSNRNSVSWSALLAVYCQNGDFEKVVSLFREMKKVD 360
Query: 361 LYSFGTVIRACAG 372
LYSFGTV+RACAG
Sbjct: 361 LYSFGTVLRACAG 373
BLAST of Cp4.1LG04g03350 vs. TAIR 10
Match:
AT1G03540.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 447.2 bits (1149), Expect = 1.5e-125
Identity = 222/372 (59.68%), Postives = 276/372 (74.19%), Query Frame = 0
Query: 3 LFIKRHCRSFTSQNL--KNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 62
+ +KRH S L S+ PTK+S+IL+ C L +A+ LNS S +
Sbjct: 4 IILKRHFSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPK- 63
Query: 63 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 122
LYASLLQTC KV SF HG Q HAHV+KSGLE DR VGNSLLSLYFKLG R TRRVFDG
Sbjct: 64 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 123
Query: 123 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 182
FVKD +SWTSM++ YV + A+E+F +M+ G++ N FTLS+ +KACSE+G + LG
Sbjct: 124 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 183
Query: 183 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 242
RCFHG+V+ HGF NH I S+L +YG N DAR++FDEMPEPD ICWT+V+SA ++N
Sbjct: 184 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 243
Query: 243 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 302
DLYE+ALG FY M R L PDG TFG+VLTAC NL RL+QG+E+H K+I +G+G NVVV
Sbjct: 244 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 303
Query: 303 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 362
ESSL+DMYGKCG+V ++++VF+ MSK+NSVSWSALLG YCQNG+ EK I IFR ME+ DL
Sbjct: 304 ESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL 363
Query: 363 YSFGTVIRACAG 373
Y FGTV++ACAG
Sbjct: 364 YCFGTVLKACAG 374
BLAST of Cp4.1LG04g03350 vs. TAIR 10
Match:
AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 205.7 bits (522), Expect = 7.5e-53
Identity = 135/409 (33.01%), Postives = 214/409 (52.32%), Query Frame = 0
Query: 27 ESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSILYASLLQTCTKVASFTHGRQIHAHVL 86
E + L+F +DLL + N L+ ++ Y +LL+ CT GR +HAH+L
Sbjct: 31 EDESLKFPSNDLL--LRTSSNDLEGSYIPADRR-FYNTLLKKCTVFKLLIQGRIVHAHIL 90
Query: 87 KSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAI 146
+S D +GN+LL++Y K GS R+VF+ + +D V+WT++I+ Y + +P +A+
Sbjct: 91 QSIFRHDIVMGNTLLNMYAKCGS-LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDAL 150
Query: 147 ELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMY 206
F ML G PN FTLS+VIKA + G HG V+ GF+SN + S+L+D+Y
Sbjct: 151 LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 210
Query: 207 GRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTF 266
R DA+ +FD + + + W ++I+ R E AL F MLR P F++
Sbjct: 211 TRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD-GFRPSHFSY 270
Query: 267 GSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSK 326
S+ AC++ G L QG+ VHA +I G ++L+DMY K G++ ++++FDR++K
Sbjct: 271 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK 330
Query: 327 RNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL----YSFGTVIRACA-----GYCFHA 386
R+ VSW++LL Y Q+G ++ + F M ++ + SF +V+ AC+ +H
Sbjct: 331 RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 390
Query: 387 RPKMKNSHEKPATKHIENVPTWSKRLLDAINRDYRKFVNFPWRLSVAIF 427
MK P H V R D +NR R P + AI+
Sbjct: 391 YELMKKDGIVPEAWHYVTVVDLLGRAGD-LNRALRFIEEMPIEPTAAIW 433
BLAST of Cp4.1LG04g03350 vs. TAIR 10
Match:
AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 202.6 bits (514), Expect = 6.3e-52
Identity = 116/349 (33.24%), Postives = 194/349 (55.59%), Query Frame = 0
Query: 28 SQILQFCGSDLLHDALHTLNSLDSFDSTTNKSILYASLLQTCTKVASFTHGRQIHAHVLK 87
+ I +C S +AL N L + DS T SLL CT+ F G IH++ +K
Sbjct: 221 AMISGYCQSGNAKEALTLSNGLRAMDSVT-----VVSLLSACTEAGDFNRGVTIHSYSIK 280
Query: 88 SGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIE 147
GLE++ FV N L+ LY + G R ++VFD ++V+D++SW S+I +Y +P AI
Sbjct: 281 HGLESELFVSNKLIDLYAEFGR-LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 340
Query: 148 LFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHG-FNSNHVIVSSLIDMY 207
LF +M I+P+ TL ++ S++G++ R G +R G F + I ++++ MY
Sbjct: 341 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 400
Query: 208 GRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTF 267
+ AR +F+ +P D I W ++IS +N +A+ + +M ++ + T+
Sbjct: 401 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 460
Query: 268 GSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSK 327
SVL AC+ G LRQG ++H +++ +GL +V V +SL DMYGKCG +E + +F ++ +
Sbjct: 461 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 520
Query: 328 RNSVSWSALLGVYCQNGDFEKVINIFRGM----EKIDLYSFGTVIRACA 372
NSV W+ L+ + +G EK + +F+ M K D +F T++ AC+
Sbjct: 521 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS 563
BLAST of Cp4.1LG04g03350 vs. TAIR 10
Match:
AT4G18520.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 199.5 bits (506), Expect = 5.4e-51
Identity = 106/311 (34.08%), Postives = 176/311 (56.59%), Query Frame = 0
Query: 64 SLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDGLFV 123
S+L+ C++ + GRQ+H+ V+K ++ D FVG SL+ +Y K G + R+VFDG+
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCG-EISDCRKVFDGMSN 348
Query: 124 KDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCF 183
++ V+WTS+I ++ REG AI LF M + N T+ ++++AC +G L+LG+
Sbjct: 349 RNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKEL 408
Query: 184 HGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLY 243
H ++++ N I S+L+ +Y + S DA + ++P D + WT++IS +
Sbjct: 409 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHE 468
Query: 244 EDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESS 303
+AL F M++ + P+ FT+ S L ACAN L G +H+ + NV V S+
Sbjct: 469 SEALDFLKEMIQE-GVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA 528
Query: 304 LVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGME----KID 363
L+ MY KCG V ++ RVFD M ++N VSW A++ Y +NG + + + ME ++D
Sbjct: 529 LIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVD 588
Query: 364 LYSFGTVIRAC 371
Y F T++ C
Sbjct: 589 DYIFATILSTC 597
BLAST of Cp4.1LG04g03350 vs. TAIR 10
Match:
AT1G50270.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 197.6 bits (501), Expect = 2.0e-50
Identity = 104/297 (35.02%), Postives = 174/297 (58.59%), Query Frame = 0
Query: 80 QIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDGLFVKDVVSWTSMITSYVRE 139
Q HAH++K GL++D FV NSL+S Y G F R+FDG KDVV+WT+MI +VR
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGL-FDFASRLFDGAEDKDVVTWTAMIDGFVRN 183
Query: 140 GKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIV 199
G A+ F +M G+ N T+ +V+KA ++ ++ GR HGL + G V +
Sbjct: 184 GSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 243
Query: 200 -SSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYS 259
SSL+DMYG+ DA+++FDEMP + + WT++I+ ++ ++ + F ML++
Sbjct: 244 GSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS-D 303
Query: 260 LSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQ 319
++P+ T SVL+ACA++G L +G VH +I + + N ++L+D+Y KCG +E++
Sbjct: 304 VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAI 363
Query: 320 RVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL----YSFGTVIRACA 372
VF+R+ ++N +W+A++ + +G ++F M + +F V+ ACA
Sbjct: 364 LVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LR69 | 2.1e-124 | 59.68 | Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana OX... | [more] |
Q9LIQ7 | 1.1e-51 | 33.01 | Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... | [more] |
O81767 | 8.9e-51 | 33.24 | Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX... | [more] |
Q0WNP3 | 7.6e-50 | 34.08 | Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidop... | [more] |
Q9LW63 | 2.9e-49 | 30.00 | Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... | [more] |
Match Name | E-value | Identity | Description | |
XP_023529479.1 | 1.21e-269 | 100.00 | pentatricopeptide repeat-containing protein At1g03540 [Cucurbita pepo subsp. pep... | [more] |
KAG6589200.1 | 6.60e-267 | 99.19 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG7022900.1 | 1.54e-265 | 98.66 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022988714.1 | 1.26e-264 | 97.85 | pentatricopeptide repeat-containing protein At1g03540 [Cucurbita maxima] | [more] |
XP_022930613.1 | 5.12e-264 | 98.12 | pentatricopeptide repeat-containing protein At1g03540 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1JMC8 | 6.10e-265 | 97.85 | pentatricopeptide repeat-containing protein At1g03540 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1EVR7 | 2.48e-264 | 98.12 | pentatricopeptide repeat-containing protein At1g03540 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1D3F1 | 8.86e-234 | 87.10 | pentatricopeptide repeat-containing protein At1g03540 OS=Momordica charantia OX=... | [more] |
A0A0A0K5P0 | 9.87e-212 | 80.16 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047230 PE=4 SV=1 | [more] |
A0A5A7SR37 | 3.23e-210 | 79.89 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT1G03540.1 | 1.5e-125 | 59.68 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT3G24000.1 | 7.5e-53 | 33.01 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G33990.1 | 6.3e-52 | 33.24 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G18520.1 | 5.4e-51 | 34.08 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G50270.1 | 2.0e-50 | 35.02 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |