Cp4.1LG04g02600 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCATGCCAATTTCGAAAGGGCTCTCATTTCTGGGCCTTGTCGCCATCTTCATTTGCTTACTATTCATCGAAGTCGCCGACGCCCATTCCGGCCACTCCGGCACCCACGCTGTCGAGAAGCCCTGCCCCGGCGGAGGGGACCACTGTCATCACAGCGGCCGCATGGCCGCACAAACCGTAGACGAGGATGACGATTTTGATGACACGTATAAAGTTCCGGTGAAAGGTAGGATGGCAATGTCCATGTCGGAATCCACCGAGGATGCTGAAGAACGGGCGGTGGAAATGGAAATGGAGACAACTTCTCCAGAGGAACCGGTGAACCAAAAAGTGGTCGTCTTGGGGCATTGA ATGGGCATGCCAATTTCGAAAGGGCTCTCATTTCTGGGCCTTGTCGCCATCTTCATTTGCTTACTATTCATCGAAGTCGCCGACGCCCATTCCGGCCACTCCGGCACCCACGCTGTCGAGAAGCCCTGCCCCGGCGGAGGGGACCACTGTCATCACAGCGGCCGCATGGCCGCACAAACCGTAGACGAGGATGACGATTTTGATGACACGTATAAAGTTCCGGTGAAAGGTAGGATGGCAATGTCCATGTCGGAATCCACCGAGGATGCTGAAGAACGGGCGGTGGAAATGGAAATGGAGACAACTTCTCCAGAGGAACCGGTGAACCAAAAAGTGGTCGTCTTGGGGCATTGA ATGGGCATGCCAATTTCGAAAGGGCTCTCATTTCTGGGCCTTGTCGCCATCTTCATTTGCTTACTATTCATCGAAGTCGCCGACGCCCATTCCGGCCACTCCGGCACCCACGCTGTCGAGAAGCCCTGCCCCGGCGGAGGGGACCACTGTCATCACAGCGGCCGCATGGCCGCACAAACCGTAGACGAGGATGACGATTTTGATGACACGTATAAAGTTCCGGTGAAAGGTAGGATGGCAATGTCCATGTCGGAATCCACCGAGGATGCTGAAGAACGGGCGGTGGAAATGGAAATGGAGACAACTTCTCCAGAGGAACCGGTGAACCAAAAAGTGGTCGTCTTGGGGCATTGA MGMPISKGLSFLGLVAIFICLLFIEVADAHSGHSGTHAVEKPCPGGGDHCHHSGRMAAQTVDEDDDFDDTYKVPVKGRMAMSMSESTEDAEERAVEMEMETTSPEEPVNQKVVVLGH Homology
BLAST of Cp4.1LG04g02600 vs. NCBI nr
Match: KAG6589281.1 (hypothetical protein SDJN03_17846, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 224 bits (570), Expect = 1.63e-73 Identity = 111/115 (96.52%), Postives = 113/115 (98.26%), Query Frame = 0
BLAST of Cp4.1LG04g02600 vs. NCBI nr
Match: KAG6572424.1 (hypothetical protein SDJN03_29152, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 105 bits (263), Expect = 9.87e-27 Identity = 64/114 (56.14%), Postives = 78/114 (68.42%), Query Frame = 0
BLAST of Cp4.1LG04g02600 vs. NCBI nr
Match: KAA0061659.1 (hypothetical protein E6C27_scaffold212G00280 [Cucumis melo var. makuwa]) HSP 1 Score: 81.3 bits (199), Expect = 5.08e-17 Identity = 56/128 (43.75%), Postives = 80/128 (62.50%), Query Frame = 0
BLAST of Cp4.1LG04g02600 vs. NCBI nr
Match: KAE8647343.1 (hypothetical protein Csa_003811 [Cucumis sativus]) HSP 1 Score: 76.6 bits (187), Expect = 3.19e-15 Identity = 54/110 (49.09%), Postives = 69/110 (62.73%), Query Frame = 0
BLAST of Cp4.1LG04g02600 vs. NCBI nr
Match: KAE8075603.1 (hypothetical protein FH972_014299 [Carpinus fangiana]) HSP 1 Score: 50.8 bits (120), Expect = 3.06e-05 Identity = 43/124 (34.68%), Postives = 60/124 (48.39%), Query Frame = 0
BLAST of Cp4.1LG04g02600 vs. ExPASy TrEMBL
Match: A0A0A0KE60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421690 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.41e-19 Identity = 60/126 (47.62%), Postives = 78/126 (61.90%), Query Frame = 0
BLAST of Cp4.1LG04g02600 vs. ExPASy TrEMBL
Match: A0A5A7V7L4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00280 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.46e-17 Identity = 56/128 (43.75%), Postives = 80/128 (62.50%), Query Frame = 0
BLAST of Cp4.1LG04g02600 vs. ExPASy TrEMBL
Match: A0A2N9FLD3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15974 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 6.95e-08 Identity = 43/125 (34.40%), Postives = 60/125 (48.00%), Query Frame = 0
BLAST of Cp4.1LG04g02600 vs. ExPASy TrEMBL
Match: A0A5N6R9F8 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014299 PE=4 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.48e-05 Identity = 43/124 (34.68%), Postives = 60/124 (48.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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