Cp4.1LG04g02360 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAAGCGCGAAGAACTAACATGATAACGCATTCCATTTCTGTGGTTTCTCTGCCCAGTTGCTCTTGTCCTCGTTCGATTCCATTCCACCAACCTCGTCTCTCCACAAACCATAAATCTTTTTCTCCCATTTCCCTTGTAACCAATTGTTCTCGGTTCAATGATTTGTGCGTTCCCTCTTTTACACCAACTCCAGCAACCGGTTGCACCAAAAACCGCAGCCCCCACGACGCCGAGCCCGACCCGATTCGAAACCAGAGGCTTTTGCAGCAATTCTACTTGTCAGTCAACTCTGAGAACGCCGCGGACGAAGACCCAGCTACTAATAATCAGAAACAAGATCCGGGTCAAGAGGATCAGAAAAAGGGTGCCAAAAACGCCAAGGGACTTTTGACAAACATGTGGTGGGCGAACCTGAAATCTGCAGTTGGTCAGAGATTAAACATCGAAGGCATTGTTTTTTCTGCAGCTGTTATTACTAAGGACCGGCATTTGGCGCTACCTCATGTTGTTGTGCCCGATGTGAGCTACATTGATTGGGCTGAACTGCAAAGAAGGGGTTTCAAGGGCGTTGTGTTTGATAAGGACAATACAATTACCGCGCCTTACTCTTTGACAATTTGGGCTCCTCTCAAATCCTCACTTGAACAGTGTAAATCTGTCTTTGGCCACAATGTAGCGGTGCTCAGCAACTCTGCTGGTAATATGGGTTAAATTCGTTAGCAATGTACTTGCTTCAATAGCCTTAATGGTTTGTTTTTGGCCTCAATGTGAATATTTACCCTCATGTTATCTGATGCGCTAGGGCTTTCTGAGTATGATCATGATGGTTCAAAAGCTAAAGCGATCGAGGGGTCGATTGGAATTAAAGTTATAAGGCATAGTGAGTCTAAATTTTCCATCTTTAATTCTATTTCTGTAACATTTGTTTACGCAGGCTGAATTTTGTTCCTGTTGCTGAACATTAGGCTTTATATATTGTATCTCCGTGCTATAACATTTTAGTGGGTCAACGTCTTATTGCTAACCACCGCCTCTTAGTGCATAAAAGTAGAGAATTTGGACTTTGAGATTTCTTCATTCCATTTTATGGATGAAGTGTGGTGTAAAAAACCATTGATTTCTACATGATGAACTAATGTTAGGCTCAATGCTTATTATGGAACACACCGTAAATTTAGGCTGATTAATTACTTTTAGTGCGTATGTAAGGTTATTTCTGCATTGCACATATGAGACATTGCTGAGTATTTTGACGTAGGGGTGAAGAAGCCTGCTGGTACAGCTGAAGAAATCGAGAAACACTTTGGTTTTACTTCTTCCCAACTTATTATGGTAAGAATCAGGTGAACTGCTTGAATGCTTTGGTTTTTTGGGTAAGCTATTATTTAGAAGTTGAAATCCATCTTTTCTCAGGTAGGTGATCGACCATTCACAGATGTGGTTTTTGGGAACCGTAATGGTCTTTTGACTATTTTAACTGAACCCTTGAGCATTGTTGGGGAGACGTTTGTTGTTAGGCAGGTTGGTTTTTCCTTCTATCTATCTATATATATATATATACCATTTTGTTCTCTTCTATTGCAATTTATTGAGGGAATTAATGAGTTGAAAATCTAGGGTAAAAGAAGATGCAAATATTGTTAATCTTTTTAAAACTTTTATTAAGTTTCCTTCACTACTACTATTATTTTCATTGATTTGTCACCGACTCGCCCAAATGTTGCATCGAGGTCATAAGCCCAGGTGGGAGTGAAAAAGGGTGTTCATGGAAAGGGCTGTGGAAATCTTGTCCCAACCTTTGGTACCTGCATGTCTAGTTAGAGTGTTCATGGCTTGGGTTGAGTCGGTTCATGTTGTTTTGTAGACCAACCTCAAAATTTGAGTTGGTCTGTTAACCTACACAAATAAACTGAATGCAACATCCAGACCAACCCAATTTATGAGTTGGTCTGTTAACCTACACAAGTAAACTGAATGCAACATCCAGACCAACCCAATTTATGCTAGGTTGTTGGCGTGAGAATGATGTGGGACATTTGTTAACAATTTATGTTATTATTTTAATTTTCAATTTTGTTGTTTTTGAGCCTTTTTAATTAGTAAGCCTAAAGTGTGTAGAAACCTAGCATCAGTGATTCTGGTGACAGAACGACGAACTTGTATATTTGGAATTTTGTTGAAAACACCTTTTGGAAGGAGATAGTTCAAACAGTGCTGGCTTTACTGCAATTTGATTTCCTTTTCAAGATGAGTCACCCGCGTCAGAAAGATAGATAAGAAACATTGCATTGAGAGAGATTAGACATCAGACAGATAAGAAACATTATGTTGAGAGAAATCAGATGGCAAGAAGATGGATCAAAGATGATTGAATAGAGATCTCGAGTGGAGAGAGATACCAACAAAGAGCAAGATCCAGAGCAAAGAGAGAGATAGGAACAATCGGTGAGATATGTAGTGGAGAGAGATATTGAGGTAGAAGGGAAGCTGGAAAGTGGAGGAGATAGATCTACCGATGTGAATAACGTTACTGAACACATTGTTTGGAGGTTCTTTGTGTAGATAAACAAAAATGAATTGGAAAAAGGACACATGAGCCATGATAAGTGTGAACACGTACTTGTGGTATGAATCTTATATTGGCCTTATTATTAGTAATAGAAGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGCGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAACCTTGGGAGGAAACCCGGTAGGAAAAGCCCAAAAAGGACAATATCTGTTAGCGGTGGGCTTAAGCTGTTACAAATGGTATCAGAGCCAGACACTGGGCGCTGGACCTCCAAAGAGGGTGAATTGTGAGATCTCACATCGGGTGGAGAGAAGAACGAAATATTTCTTATAAAAGTGTGGAAACCTCTCCCTAGTAGACGCATTTTAAAACCTTGAGGGGAAGTCCGAAAGGGGAAGCCTAAAGAAGACAATCTCTACTAGCAGTGGGCTTGGGTTGTTAGAAAATAAGACGTTAGAATATTATTTATTTGTATCGGGTTGGTTTGGGTTGAACTGCCACCTATTTTTTTCCCAACATGTGAACCTATCTGAAATTTTTGTTGTACAAATTGACACAAATCAGAATTAAAATTCACCCATCTCATCCCAACCCTTACAGTTTGCTTAGAGTTGTTCAAGTTTGGTGTGTTGCCGGTTTACTTGGTCTAACAACCTTTCAGCCTACTACTGATGGTTTTTGATAACGTAGAATAATAGACATCCAAATATGACCACCATCATTTGTCCTTCTACTTTATCAGTATGCATTCATATTACTACGTGACCACCAGAGATGCCGATCCATTGTTCACTCTATTCTGTGATTTTTTCTGTTCGCAGGTAAGGAAATTAGAAACATTCCTCTTGAACCGTTGGCTTAAGCAAGGAGTAAGACCTATCAATCATCGCCTATTACCATTACCAGACACTAAACAGTGCATTAAAGATTTGTAACCTCTTTAGTATGAATGAAAAATTTTGCCCTGTAGATATCCATGAACTGCTGAAAGATGCCATTCTTTTTGTCCTCTGGCCATTCATTAGCTTATGGTATTAGCGCCTGAGTTGAATATAATACATTGGTAGACTTTGTACTTTTGGACAGCAACAATATTGAAATGTAGAAGGGTTTCCTATCATCTCATCTTGATTTCTGCTCTTGAAAAGAATCATAATTATGTAAATTATATGATCTGATATTTAGAGGTTCTACATTAAGGATGA ACAAGCGCGAAGAACTAACATGATAACGCATTCCATTTCTGTGGTTTCTCTGCCCAGTTGCTCTTGTCCTCGTTCGATTCCATTCCACCAACCTCGTCTCTCCACAAACCATAAATCTTTTTCTCCCATTTCCCTTGTAACCAATTGTTCTCGGTTCAATGATTTGTGCGTTCCCTCTTTTACACCAACTCCAGCAACCGGTTGCACCAAAAACCGCAGCCCCCACGACGCCGAGCCCGACCCGATTCGAAACCAGAGGCTTTTGCAGCAATTCTACTTGTCAGTCAACTCTGAGAACGCCGCGGACGAAGACCCAGCTACTAATAATCAGAAACAAGATCCGGGTCAAGAGGATCAGAAAAAGGGTGCCAAAAACGCCAAGGGACTTTTGACAAACATGTGGTGGGCGAACCTGAAATCTGCAGTTGGTCAGAGATTAAACATCGAAGGCATTGTTTTTTCTGCAGCTGTTATTACTAAGGACCGGCATTTGGCGCTACCTCATGTTGTTGTGCCCGATGTGAGCTACATTGATTGGGCTGAACTGCAAAGAAGGGGTTTCAAGGGCGTTGTGTTTGATAAGGACAATACAATTACCGCGCCTTACTCTTTGACAATTTGGGCTCCTCTCAAATCCTCACTTGAACAGTGTAAATCTGTCTTTGGCCACAATGTAGCGGTGCTCAGCAACTCTGCTGGGCTTTCTGAGTATGATCATGATGGTTCAAAAGCTAAAGCGATCGAGGGGTCGATTGGAATTAAAGTTATAAGGCATAGGGTGAAGAAGCCTGCTGGTACAGCTGAAGAAATCGAGAAACACTTTGGTTTTACTTCTTCCCAACTTATTATGGTAGGTGATCGACCATTCACAGATGTGGTTTTTGGGAACCGTAATGGTCTTTTGACTATTTTAACTGAACCCTTGAGCATTGTTGGGGAGACGTTTGTTGTTAGGCAGGTAAGGAAATTAGAAACATTCCTCTTGAACCGTTGGCTTAAGCAAGGAGTAAGACCTATCAATCATCGCCTATTACCATTACCAGACACTAAACAGTGCATTAAAGATTTGTAACCTCTTTAGTATGAATGAAAAATTTTGCCCTGTAGATATCCATGAACTGCTGAAAGATGCCATTCTTTTTGTCCTCTGGCCATTCATTAGCTTATGGTATTAGCGCCTGAGTTGAATATAATACATTGGTAGACTTTGTACTTTTGGACAGCAACAATATTGAAATGTAGAAGGGTTTCCTATCATCTCATCTTGATTTCTGCTCTTGAAAAGAATCATAATTATGTAAATTATATGATCTGATATTTAGAGGTTCTACATTAAGGATGA ATGATAACGCATTCCATTTCTGTGGTTTCTCTGCCCAGTTGCTCTTGTCCTCGTTCGATTCCATTCCACCAACCTCGTCTCTCCACAAACCATAAATCTTTTTCTCCCATTTCCCTTGTAACCAATTGTTCTCGGTTCAATGATTTGTGCGTTCCCTCTTTTACACCAACTCCAGCAACCGGTTGCACCAAAAACCGCAGCCCCCACGACGCCGAGCCCGACCCGATTCGAAACCAGAGGCTTTTGCAGCAATTCTACTTGTCAGTCAACTCTGAGAACGCCGCGGACGAAGACCCAGCTACTAATAATCAGAAACAAGATCCGGGTCAAGAGGATCAGAAAAAGGGTGCCAAAAACGCCAAGGGACTTTTGACAAACATGTGGTGGGCGAACCTGAAATCTGCAGTTGGTCAGAGATTAAACATCGAAGGCATTGTTTTTTCTGCAGCTGTTATTACTAAGGACCGGCATTTGGCGCTACCTCATGTTGTTGTGCCCGATGTGAGCTACATTGATTGGGCTGAACTGCAAAGAAGGGGTTTCAAGGGCGTTGTGTTTGATAAGGACAATACAATTACCGCGCCTTACTCTTTGACAATTTGGGCTCCTCTCAAATCCTCACTTGAACAGTGTAAATCTGTCTTTGGCCACAATGTAGCGGTGCTCAGCAACTCTGCTGGGCTTTCTGAGTATGATCATGATGGTTCAAAAGCTAAAGCGATCGAGGGGTCGATTGGAATTAAAGTTATAAGGCATAGGGTGAAGAAGCCTGCTGGTACAGCTGAAGAAATCGAGAAACACTTTGGTTTTACTTCTTCCCAACTTATTATGGTAGGTGATCGACCATTCACAGATGTGGTTTTTGGGAACCGTAATGGTCTTTTGACTATTTTAACTGAACCCTTGAGCATTGTTGGGGAGACGTTTGTTGTTAGGCAGGTAAGGAAATTAGAAACATTCCTCTTGAACCGTTGGCTTAAGCAAGGAGTAAGACCTATCAATCATCGCCTATTACCATTACCAGACACTAAACAGTGCATTAAAGATTTGTAA MITHSISVVSLPSCSCPRSIPFHQPRLSTNHKSFSPISLVTNCSRFNDLCVPSFTPTPATGCTKNRSPHDAEPDPIRNQRLLQQFYLSVNSENAADEDPATNNQKQDPGQEDQKKGAKNAKGLLTNMWWANLKSAVGQRLNIEGIVFSAAVITKDRHLALPHVVVPDVSYIDWAELQRRGFKGVVFDKDNTITAPYSLTIWAPLKSSLEQCKSVFGHNVAVLSNSAGLSEYDHDGSKAKAIEGSIGIKVIRHRVKKPAGTAEEIEKHFGFTSSQLIMVGDRPFTDVVFGNRNGLLTILTEPLSIVGETFVVRQVRKLETFLLNRWLKQGVRPINHRLLPLPDTKQCIKDL Homology
BLAST of Cp4.1LG04g02360 vs. ExPASy Swiss-Prot
Match: Q9LXR9 (Phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PGPP1 PE=1 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 5.5e-91 Identity = 181/359 (50.42%), Postives = 235/359 (65.46%), Query Frame = 0
BLAST of Cp4.1LG04g02360 vs. ExPASy Swiss-Prot
Match: A0A2K3DU55 (Phosphatidylglycerophosphate phosphatase 1, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PGPP1 PE=1 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.8e-49 Identity = 94/214 (43.93%), Postives = 132/214 (61.68%), Query Frame = 0
BLAST of Cp4.1LG04g02360 vs. ExPASy Swiss-Prot
Match: P54452 (Probable phosphatase YqeG OS=Bacillus subtilis (strain 168) OX=224308 GN=yqeG PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 9.1e-09 Identity = 47/171 (27.49%), Postives = 82/171 (47.95%), Query Frame = 0
BLAST of Cp4.1LG04g02360 vs. NCBI nr
Match: XP_023529294.1 (uncharacterized protein LOC111792185 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 705 bits (1820), Expect = 2.57e-256 Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g02360 vs. NCBI nr
Match: XP_022930682.1 (uncharacterized protein LOC111437079 isoform X1 [Cucurbita moschata]) HSP 1 Score: 689 bits (1777), Expect = 9.22e-250 Identity = 341/350 (97.43%), Postives = 343/350 (98.00%), Query Frame = 0
BLAST of Cp4.1LG04g02360 vs. NCBI nr
Match: XP_022930683.1 (uncharacterized protein LOC111437079 isoform X2 [Cucurbita moschata]) HSP 1 Score: 645 bits (1664), Expect = 8.47e-233 Identity = 320/330 (96.97%), Postives = 323/330 (97.88%), Query Frame = 0
BLAST of Cp4.1LG04g02360 vs. NCBI nr
Match: XP_022989193.1 (uncharacterized protein LOC111486339 [Cucurbita maxima]) HSP 1 Score: 640 bits (1651), Expect = 5.90e-229 Identity = 319/330 (96.67%), Postives = 322/330 (97.58%), Query Frame = 0
BLAST of Cp4.1LG04g02360 vs. NCBI nr
Match: XP_004140141.1 (uncharacterized protein LOC101213822 [Cucumis sativus] >KGN47996.1 hypothetical protein Csa_004243 [Cucumis sativus]) HSP 1 Score: 588 bits (1517), Expect = 3.56e-210 Identity = 293/350 (83.71%), Postives = 311/350 (88.86%), Query Frame = 0
BLAST of Cp4.1LG04g02360 vs. ExPASy TrEMBL
Match: A0A6J1ER97 (uncharacterized protein LOC111437079 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437079 PE=4 SV=1) HSP 1 Score: 689 bits (1777), Expect = 4.46e-250 Identity = 341/350 (97.43%), Postives = 343/350 (98.00%), Query Frame = 0
BLAST of Cp4.1LG04g02360 vs. ExPASy TrEMBL
Match: A0A6J1EW16 (uncharacterized protein LOC111437079 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437079 PE=4 SV=1) HSP 1 Score: 645 bits (1664), Expect = 4.10e-233 Identity = 320/330 (96.97%), Postives = 323/330 (97.88%), Query Frame = 0
BLAST of Cp4.1LG04g02360 vs. ExPASy TrEMBL
Match: A0A6J1JPJ9 (uncharacterized protein LOC111486339 OS=Cucurbita maxima OX=3661 GN=LOC111486339 PE=4 SV=1) HSP 1 Score: 640 bits (1651), Expect = 2.85e-229 Identity = 319/330 (96.67%), Postives = 322/330 (97.58%), Query Frame = 0
BLAST of Cp4.1LG04g02360 vs. ExPASy TrEMBL
Match: A0A0A0KJU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G423380 PE=4 SV=1) HSP 1 Score: 588 bits (1517), Expect = 1.72e-210 Identity = 293/350 (83.71%), Postives = 311/350 (88.86%), Query Frame = 0
BLAST of Cp4.1LG04g02360 vs. ExPASy TrEMBL
Match: A0A1S3BN52 (uncharacterized protein LOC103491381 OS=Cucumis melo OX=3656 GN=LOC103491381 PE=4 SV=1) HSP 1 Score: 586 bits (1510), Expect = 2.01e-209 Identity = 290/350 (82.86%), Postives = 308/350 (88.00%), Query Frame = 0
BLAST of Cp4.1LG04g02360 vs. TAIR 10
Match: AT3G58830.1 (haloacid dehalogenase (HAD) superfamily protein ) HSP 1 Score: 336.3 bits (861), Expect = 3.0e-92 Identity = 178/343 (51.90%), Postives = 229/343 (66.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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