Cp4.1LG04g02210 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g02210
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger protein CONSTANS-LIKE 5-like
Location	Cp4.1LG04: 7888888 .. 7890452 (-)
RNA-Seq Expression	Cp4.1LG04g02210
Synteny	Cp4.1LG04g02210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCGTTCCTCAATTCTTCTACACTGACTACACAACAACAACATCAATAATTCCCAATGACTTCTGTGAGCAGCGCCCTCCTCCAACGGCGCCGGCACTGGGCGGCGGTGTATTGTGGGGCGAGGAAACCTTGGTTCCTTTGTTCGATGATTTTGGGCTTCATCATCAACCTCCTATTTCCCCATCCCAATACTCTTCTGATAAACCTGGTCTGACACCCACCTCGTTTCCTCACCAAGACATGATCGCATTGCCTGAACTTAACACGCCCTCCATCTGTGCCACTAATAATGCAGCCCCATGTCAAAGCTTTTGCGTTGGGTACCAACCTGATGATCATCCCTTGTTTCAATATCCAGACGAATGCTTCCGTTTGGTGCCTGAGACCGAACCACTTTACCACCCGCTTCCTCCCGACAACTGGGTTGAGTCATAAATTGTCCATTATGATTTAGTTTATATCCTTATTGAAAATTTACGATTTTTTTTTTTTTTTTAATTAATTGTGAATTGTTTTAGAATTTACGATTTTCTTTTTTCTTTTTTTAATTAATTGTGAATTGTTTTAGGAAATTCAAAGCAACCAAGTTCCTGTATCTGAAGACTCAAACATGAAGGTGGGCCGCTATTCTGAAGAAGTAAGAAAAGAAAGGATTCTGCGGTATTTGAAGAAGAGAAACCAAAGAAATTTCAACAAAACCATAAAGGTATATAATATATGTAATCTGGTTACACCATAAATTAATAGAATACAACGTATGATATAAGGTTAATTTGTGTGTGTATAAATTAAACAACAGTATGCATGTCGGAAAACCTTAGCCGACAGAAGGATTCGAGTCCGAGGAAGATTTGCGAGGAACAACGAAGCATGTGATCAACAACTTAATCCGACTAAGATCAACCACACTTCTATTCACAAAGTGGACACTCAATTATTATACAACCAAGATCATGTGGGTGCCCAGGTATCTAACCTATCTACAAACTGCCCAATTAATTATCCCACATGCATTAACATCTTAATTTAATATTATGAGTTTTAAAAAAAAATTAAATTAGGCTTTTGAAGTTGATTAGCGGTGTAATAGACATAATATTATTATGATATTTGCAGATGAAGAAGGATGAAGAAGAATGGGTAGAAGAGATGACAGGGTTAATGTACTTACCCTACATCAGCAGTTGAGAGATGGCAGTGATGAAAATCAAGAAGGGGCAGCAAATTAAAGGGAAGAATATAGGAAAATACTTGGTGGGTAGGGCGTACTTTAATTAATGAATTAAACCAGCAGAGGTAATTATGATAATGTTCCGAGTGTTAATTTTTTTAATCATCCTAGGATATGGAAACATAGGAGAGTAAGAGAAGGAGGGTTCAGCATTTTGTCATTCAAATAATATATAACATATGGTTTAAAAAGGTGTAGTTGATGGGATGGGATGGTGTTGATTAGTTCATCATCATCACCAAATTATAAATTATAAATTATTCTGGTTTTATATATAGTGGATGTATATCACATCCAACATGTAGTTAATATGTGGATAGTGTTGTAT

mRNA sequence

ATGGCTTCCGTTCCTCAATTCTTCTACACTGACTACACAACAACAACATCAATAATTCCCAATGACTTCTGTGAGCAGCGCCCTCCTCCAACGGCGCCGGCACTGGGCGGCGGTGTATTGTGGGGCGAGGAAACCTTGGTTCCTTTGTTCGATGATTTTGGGCTTCATCATCAACCTCCTATTTCCCCATCCCAATACTCTTCTGATAAACCTGGTCTGACACCCACCTCGTTTCCTCACCAAGACATGATCGCATTGCCTGAACTTAACACGCCCTCCATCTGTGCCACTAATAATGCAGCCCCATGTCAAAGCTTTTGCGTTGGGTACCAACCTGATGATCATCCCTTGTTTCAATATCCAGACGAATGCTTCCGTTTGGTGCCTGAGACCGAACCACTTTACCACCCGCTTCCTCCCGACAACTGGGAAATTCAAAGCAACCAAGTTCCTGTATCTGAAGACTCAAACATGAAGGTGGGCCGCTATTCTGAAGAAGTAAGAAAAGAAAGGATTCTGCGGTATTTGAAGAAGAGAAACCAAAGAAATTTCAACAAAACCATAAAGTATGCATGTCGGAAAACCTTAGCCGACAGAAGGATTCGAGTCCGAGGAAGATTTGCGAGGAACAACGAAGCATGTGATCAACAACTTAATCCGACTAAGATCAACCACACTTCTATTCACAAAGTGGACACTCAATTATTATACAACCAAGATCATGTGGGTGCCCAGATGAAGAAGGATGAAGAAGAATGGGTAGAAGAGATGACAGGGTTAATGTACTTACCCTACATCAGCAGTTGAGAGATGGCAGTGATGAAAATCAAGAAGGGGCAGCAAATTAAAGGGAAGAATATAGGAAAATACTTGGTGGGTAGGGCGTACTTTAATTAATGAATTAAACCAGCAGAGGTAATTATGATAATGTTCCGAGTGTTAATTTTTTTAATCATCCTAGGATATGGAAACATAGGAGAGTAAGAGAAGGAGGGTTCAGCATTTTGTCATTCAAATAATATATAACATATGGTTTAAAAAGGTGTAGTTGATGGGATGGGATGGTGTTGATTAGTTCATCATCATCACCAAATTATAAATTATAAATTATTCTGGTTTTATATATAGTGGATGTATATCACATCCAACATGTAGTTAATATGTGGATAGTGTTGTAT

Coding sequence (CDS)

ATGGCTTCCGTTCCTCAATTCTTCTACACTGACTACACAACAACAACATCAATAATTCCCAATGACTTCTGTGAGCAGCGCCCTCCTCCAACGGCGCCGGCACTGGGCGGCGGTGTATTGTGGGGCGAGGAAACCTTGGTTCCTTTGTTCGATGATTTTGGGCTTCATCATCAACCTCCTATTTCCCCATCCCAATACTCTTCTGATAAACCTGGTCTGACACCCACCTCGTTTCCTCACCAAGACATGATCGCATTGCCTGAACTTAACACGCCCTCCATCTGTGCCACTAATAATGCAGCCCCATGTCAAAGCTTTTGCGTTGGGTACCAACCTGATGATCATCCCTTGTTTCAATATCCAGACGAATGCTTCCGTTTGGTGCCTGAGACCGAACCACTTTACCACCCGCTTCCTCCCGACAACTGGGAAATTCAAAGCAACCAAGTTCCTGTATCTGAAGACTCAAACATGAAGGTGGGCCGCTATTCTGAAGAAGTAAGAAAAGAAAGGATTCTGCGGTATTTGAAGAAGAGAAACCAAAGAAATTTCAACAAAACCATAAAGTATGCATGTCGGAAAACCTTAGCCGACAGAAGGATTCGAGTCCGAGGAAGATTTGCGAGGAACAACGAAGCATGTGATCAACAACTTAATCCGACTAAGATCAACCACACTTCTATTCACAAAGTGGACACTCAATTATTATACAACCAAGATCATGTGGGTGCCCAGATGAAGAAGGATGAAGAAGAATGGGTAGAAGAGATGACAGGGTTAATGTACTTACCCTACATCAGCAGTTGA

Protein sequence

MASVPQFFYTDYTTTTSIIPNDFCEQRPPPTAPALGGGVLWGEETLVPLFDDFGLHHQPPISPSQYSSDKPGLTPTSFPHQDMIALPELNTPSICATNNAAPCQSFCVGYQPDDHPLFQYPDECFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQLLYNQDHVGAQMKKDEEEWVEEMTGLMYLPYISS

Homology

[Close]

BLAST of Cp4.1LG04g02210 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06
Identity = 44/162 (27.16%), Postives = 72/162 (44.44%), Query Frame = 0


Query: 75  PTSFPHQ------DMIALPELNTPSICATNNAAPCQSFCVGYQPDDHPLFQYPDECFRLV 134
           P SF H       D +   +  T  +  TNN      F + +       F YP +     
Sbjct: 188 PNSFNHHQNNAGGDSLVPVQTKTEPLPLTNND---HCFDIDFCRSKLSAFTYPSQSVSHS 247

Query: 135 PETEPLYHPLPPD-NWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKRNQRNFNKT 194
             T  + + + PD N     N+  ++  +     + S   R+ R+LRY +KR  R F KT
Sbjct: 248 VSTSSIEYGVVPDGNTNNSVNRSTITSSTTGGDHQASSMDREARVLRYREKRKNRKFEKT 307

Query: 195 IKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIH 230
           I+YA RK  A+ R R++GRFA+  E  +  +  + +  ++ H
Sbjct: 308 IRYASRKAYAESRPRIKGRFAKRTETENDDIFLSHVYASAAH 346

[Close]

BLAST of Cp4.1LG04g02210 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.0e-04
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 168 RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLN 220
           R+ R+LRY +K+  R F KTI+YA RK  A++R R++GRFA+  +  D++ N
Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDV-DEEAN 336

[Close]

BLAST of Cp4.1LG04g02210 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.4e-04
Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 168 RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA 214
           R+ R+LRY +KR  R F KTI+YA RK  A+ R R++GRFA+  ++
Sbjct: 229 REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDS 274

[Close]

BLAST of Cp4.1LG04g02210 vs. ExPASy Swiss-Prot
Match: Q9LKL2 (Two-component response regulator-like APRR1 OS=Arabidopsis thaliana OX=3702 GN=APRR1 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.3e-04
Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 168 RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLN 220
           R+E +L++ +KRNQR F+K I+Y  RK LA+RR RV+G+F R     +  LN
Sbjct: 533 REEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLN 584

[Close]

BLAST of Cp4.1LG04g02210 vs. ExPASy Swiss-Prot
Match: Q39057 (Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.0e-04
Identity = 32/82 (39.02%), Postives = 42/82 (51.22%), Query Frame = 0


Query: 136 HPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKT 195
           HP  P        Q P      + V + S   R+ R+LRY +KR  R F KTI+YA RK 
Sbjct: 277 HPRTPKG---TVEQQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKA 336

Query: 196 LADRRIRVRGRFARNNEACDQQ 218
            A+ R RV GRFA+     ++Q
Sbjct: 337 YAEIRPRVNGRFAKREIEAEEQ 355

[Close]

BLAST of Cp4.1LG04g02210 vs. NCBI nr
Match: XP_023530352.1 (zinc finger protein CONSTANS-LIKE 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 556 bits (1433), Expect = 4.32e-200
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MASVPQFFYTDYTTTTSIIPNDFCEQRPPPTAPALGGGVLWGEETLVPLFDDFGLHHQPP 60
           MASVPQFFYTDYTTTTSIIPNDFCEQRPPPTAPALGGGVLWGEETLVPLFDDFGLHHQPP
Sbjct: 1   MASVPQFFYTDYTTTTSIIPNDFCEQRPPPTAPALGGGVLWGEETLVPLFDDFGLHHQPP 60

Query: 61  ISPSQYSSDKPGLTPTSFPHQDMIALPELNTPSICATNNAAPCQSFCVGYQPDDHPLFQY 120
           ISPSQYSSDKPGLTPTSFPHQDMIALPELNTPSICATNNAAPCQSFCVGYQPDDHPLFQY
Sbjct: 61  ISPSQYSSDKPGLTPTSFPHQDMIALPELNTPSICATNNAAPCQSFCVGYQPDDHPLFQY 120

Query: 121 PDECFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKRN 180
           PDECFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKRN
Sbjct: 121 PDECFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKRN 180

Query: 181 QRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQLLYNQD 240
           QRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQLLYNQD
Sbjct: 181 QRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQLLYNQD 240

Query: 241 HVGAQMKKDEEEWVEEMTGLMYLPYISS 268
           HVGAQMKKDEEEWVEEMTGLMYLPYISS
Sbjct: 241 HVGAQMKKDEEEWVEEMTGLMYLPYISS 268

[Close]

BLAST of Cp4.1LG04g02210 vs. NCBI nr
Match: XP_022989100.1 (zinc finger protein CONSTANS-LIKE 5-like [Cucurbita maxima])

HSP 1 Score: 543 bits (1398), Expect = 9.39e-195
Identity = 259/268 (96.64%), Postives = 264/268 (98.51%), Query Frame = 0


Query: 1   MASVPQFFYTDYTTTTSIIPNDFCEQRPPPTAPALGGGVLWGEETLVPLFDDFGLHHQPP 60
           MAS+PQFFYTDYT TTS+IPNDFCEQRPPPTAP LGGGVLWGEETLVPLFDDFGLHHQPP
Sbjct: 1   MASIPQFFYTDYTATTSLIPNDFCEQRPPPTAPPLGGGVLWGEETLVPLFDDFGLHHQPP 60

Query: 61  ISPSQYSSDKPGLTPTSFPHQDMIALPELNTPSICATNNAAPCQSFCVGYQPDDHPLFQY 120
           ISPSQYSS KPGLTPTSFPHQDMIALPELNTPS+CATNNAAPCQ+FCVGYQPDDHPLFQY
Sbjct: 61  ISPSQYSSHKPGLTPTSFPHQDMIALPELNTPSMCATNNAAPCQNFCVGYQPDDHPLFQY 120

Query: 121 PDECFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKRN 180
           PD+CFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKRN
Sbjct: 121 PDDCFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKRN 180

Query: 181 QRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQLLYNQD 240
           QRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQLLYNQD
Sbjct: 181 QRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQLLYNQD 240

Query: 241 HVGAQMKKDEEEWVEEMTGLMYLPYISS 268
           HVGAQ KKDEEEWVEEMTGLMYLPYISS
Sbjct: 241 HVGAQRKKDEEEWVEEMTGLMYLPYISS 268

[Close]

BLAST of Cp4.1LG04g02210 vs. NCBI nr
Match: KAG7023006.1 (Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 537 bits (1383), Expect = 1.89e-192
Identity = 259/269 (96.28%), Postives = 265/269 (98.51%), Query Frame = 0


Query: 1   MASVPQFFYTDYTTTT-SIIPNDFCEQRPPPTAPALGGGVLWGEETLVPLFDDFGLHHQP 60
           MAS+PQFFYTDYTTTT SIIPNDFCEQRPPPTAPALGGGVLWGEETLVPLFDDFGLHHQP
Sbjct: 1   MASIPQFFYTDYTTTTTSIIPNDFCEQRPPPTAPALGGGVLWGEETLVPLFDDFGLHHQP 60

Query: 61  PISPSQYSSDKPGLTPTSFPHQDMIALPELNTPSICATNNAAPCQSFCVGYQPDDHPLFQ 120
           PISPSQYSS KPGLTPTSFPHQD+IALP+LNTPSICATNNAAPCQSFCVGYQPDDHPLFQ
Sbjct: 61  PISPSQYSSHKPGLTPTSFPHQDIIALPQLNTPSICATNNAAPCQSFCVGYQPDDHPLFQ 120

Query: 121 YPDECFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKR 180
           YPD+CFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKR
Sbjct: 121 YPDDCFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKR 180

Query: 181 NQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQLLYNQ 240
           NQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACD+QLNPTKINHTSIHKVDTQLLYN+
Sbjct: 181 NQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDRQLNPTKINHTSIHKVDTQLLYNR 240

Query: 241 DHVGAQMKKDEEEWVEEMTGLMYLPYISS 268
           DHVGAQ KKDEEEWVEEM GLMYLPYISS
Sbjct: 241 DHVGAQRKKDEEEWVEEMRGLMYLPYISS 269

[Close]

BLAST of Cp4.1LG04g02210 vs. NCBI nr
Match: KAG6589308.1 (Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 534 bits (1376), Expect = 2.20e-191
Identity = 257/269 (95.54%), Postives = 264/269 (98.14%), Query Frame = 0


Query: 1   MASVPQFFYTDYTTTT-SIIPNDFCEQRPPPTAPALGGGVLWGEETLVPLFDDFGLHHQP 60
           MAS+PQFFYTDYTTTT SIIPNDFC+QRPPPTAPALGGGVLWGEETL PLFDDFGLHHQP
Sbjct: 1   MASIPQFFYTDYTTTTTSIIPNDFCDQRPPPTAPALGGGVLWGEETLAPLFDDFGLHHQP 60

Query: 61  PISPSQYSSDKPGLTPTSFPHQDMIALPELNTPSICATNNAAPCQSFCVGYQPDDHPLFQ 120
           PISPSQYSS KPGLTPTSFPHQD+IALP+LNTPSICATNNAAPCQSFCVGYQPDDHPLFQ
Sbjct: 61  PISPSQYSSHKPGLTPTSFPHQDIIALPQLNTPSICATNNAAPCQSFCVGYQPDDHPLFQ 120

Query: 121 YPDECFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKR 180
           YPD+CFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKR
Sbjct: 121 YPDDCFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKR 180

Query: 181 NQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQLLYNQ 240
           NQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACD+QLNPTKINHTSIHKVDTQLLYN+
Sbjct: 181 NQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDRQLNPTKINHTSIHKVDTQLLYNR 240

Query: 241 DHVGAQMKKDEEEWVEEMTGLMYLPYISS 268
           DHVGAQ KKDEEEWVEEM GLMYLPYISS
Sbjct: 241 DHVGAQRKKDEEEWVEEMRGLMYLPYISS 269

[Close]

BLAST of Cp4.1LG04g02210 vs. NCBI nr
Match: XP_022930639.1 (zinc finger protein CONSTANS-LIKE 5-like [Cucurbita moschata])

HSP 1 Score: 532 bits (1371), Expect = 1.27e-190
Identity = 257/269 (95.54%), Postives = 262/269 (97.40%), Query Frame = 0


Query: 1   MASVPQFFYTDYTTTT-SIIPNDFCEQRPPPTAPALGGGVLWGEETLVPLFDDFGLHHQP 60
           MAS+PQFFYTDYTTTT SIIPNDFCEQRPPPTAPALGGGVLWGEET VPLFDDFGLHHQP
Sbjct: 1   MASIPQFFYTDYTTTTTSIIPNDFCEQRPPPTAPALGGGVLWGEETSVPLFDDFGLHHQP 60

Query: 61  PISPSQYSSDKPGLTPTSFPHQDMIALPELNTPSICATNNAAPCQSFCVGYQPDDHPLFQ 120
           PISPSQYSS KPGLTPTSFPHQDMIALP+LNTPSICATNNAAPCQSFCVGYQPDDHPLFQ
Sbjct: 61  PISPSQYSSHKPGLTPTSFPHQDMIALPQLNTPSICATNNAAPCQSFCVGYQPDDHPLFQ 120

Query: 121 YPDECFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKR 180
           YPD+CFRLVPETEPLYHPLPPDNWEIQS+QVPVSEDSNMKVGRYSEEVRKERILRYLKKR
Sbjct: 121 YPDDCFRLVPETEPLYHPLPPDNWEIQSSQVPVSEDSNMKVGRYSEEVRKERILRYLKKR 180

Query: 181 NQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQLLYNQ 240
           NQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHT IHK DTQLLYN+
Sbjct: 181 NQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTCIHKADTQLLYNR 240

Query: 241 DHVGAQMKKDEEEWVEEMTGLMYLPYISS 268
           DHVGAQ KKDEEEWVEEM GLMYLPYISS
Sbjct: 241 DHVGAQRKKDEEEWVEEMRGLMYLPYISS 269

[Close]

BLAST of Cp4.1LG04g02210 vs. ExPASy TrEMBL
Match: A0A6J1JLF7 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita maxima OX=3661 GN=LOC111486274 PE=4 SV=1)

HSP 1 Score: 543 bits (1398), Expect = 4.55e-195
Identity = 259/268 (96.64%), Postives = 264/268 (98.51%), Query Frame = 0


Query: 1   MASVPQFFYTDYTTTTSIIPNDFCEQRPPPTAPALGGGVLWGEETLVPLFDDFGLHHQPP 60
           MAS+PQFFYTDYT TTS+IPNDFCEQRPPPTAP LGGGVLWGEETLVPLFDDFGLHHQPP
Sbjct: 1   MASIPQFFYTDYTATTSLIPNDFCEQRPPPTAPPLGGGVLWGEETLVPLFDDFGLHHQPP 60

Query: 61  ISPSQYSSDKPGLTPTSFPHQDMIALPELNTPSICATNNAAPCQSFCVGYQPDDHPLFQY 120
           ISPSQYSS KPGLTPTSFPHQDMIALPELNTPS+CATNNAAPCQ+FCVGYQPDDHPLFQY
Sbjct: 61  ISPSQYSSHKPGLTPTSFPHQDMIALPELNTPSMCATNNAAPCQNFCVGYQPDDHPLFQY 120

Query: 121 PDECFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKRN 180
           PD+CFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKRN
Sbjct: 121 PDDCFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKRN 180

Query: 181 QRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQLLYNQD 240
           QRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQLLYNQD
Sbjct: 181 QRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQLLYNQD 240

Query: 241 HVGAQMKKDEEEWVEEMTGLMYLPYISS 268
           HVGAQ KKDEEEWVEEMTGLMYLPYISS
Sbjct: 241 HVGAQRKKDEEEWVEEMTGLMYLPYISS 268

[Close]

BLAST of Cp4.1LG04g02210 vs. ExPASy TrEMBL
Match: A0A6J1ES17 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437041 PE=4 SV=1)

HSP 1 Score: 532 bits (1371), Expect = 6.17e-191
Identity = 257/269 (95.54%), Postives = 262/269 (97.40%), Query Frame = 0


Query: 1   MASVPQFFYTDYTTTT-SIIPNDFCEQRPPPTAPALGGGVLWGEETLVPLFDDFGLHHQP 60
           MAS+PQFFYTDYTTTT SIIPNDFCEQRPPPTAPALGGGVLWGEET VPLFDDFGLHHQP
Sbjct: 1   MASIPQFFYTDYTTTTTSIIPNDFCEQRPPPTAPALGGGVLWGEETSVPLFDDFGLHHQP 60

Query: 61  PISPSQYSSDKPGLTPTSFPHQDMIALPELNTPSICATNNAAPCQSFCVGYQPDDHPLFQ 120
           PISPSQYSS KPGLTPTSFPHQDMIALP+LNTPSICATNNAAPCQSFCVGYQPDDHPLFQ
Sbjct: 61  PISPSQYSSHKPGLTPTSFPHQDMIALPQLNTPSICATNNAAPCQSFCVGYQPDDHPLFQ 120

Query: 121 YPDECFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKR 180
           YPD+CFRLVPETEPLYHPLPPDNWEIQS+QVPVSEDSNMKVGRYSEEVRKERILRYLKKR
Sbjct: 121 YPDDCFRLVPETEPLYHPLPPDNWEIQSSQVPVSEDSNMKVGRYSEEVRKERILRYLKKR 180

Query: 181 NQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQLLYNQ 240
           NQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHT IHK DTQLLYN+
Sbjct: 181 NQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTCIHKADTQLLYNR 240

Query: 241 DHVGAQMKKDEEEWVEEMTGLMYLPYISS 268
           DHVGAQ KKDEEEWVEEM GLMYLPYISS
Sbjct: 241 DHVGAQRKKDEEEWVEEMRGLMYLPYISS 269

[Close]

BLAST of Cp4.1LG04g02210 vs. ExPASy TrEMBL
Match: A0A6J1I2H1 (uncharacterized protein LOC111468419 OS=Cucurbita maxima OX=3661 GN=LOC111468419 PE=4 SV=1)

HSP 1 Score: 299 bits (766), Expect = 5.30e-99
Identity = 174/280 (62.14%), Postives = 201/280 (71.79%), Query Frame = 0


Query: 1   MASVPQFFYTDYTTT-TSIIPNDFCEQRPPPTAPALGG---GVLWGEETLVPLFDDFGLH 60
           MAS+PQF Y DYT T  ++ PND  +  PPPT P+  G   G  WGEETLVPLF +FGL 
Sbjct: 1   MASIPQF-YPDYTPTGAAMFPNDLYD-LPPPTTPSTAGTPGGPFWGEETLVPLFHEFGLL 60

Query: 61  HQPPISPS-QYS-SDKPG------LTPTSFPHQDMIALPELNTPSICATNNAAPCQSFCV 120
           H P +SPS QY   DKP       + PTSFP        +LN PSI    N   CQ+ C+
Sbjct: 61  HPPSLSPSAQYCCDDKPSPPLSSAIDPTSFP--------QLNIPSI----NGG-CQNSCL 120

Query: 121 GYQPDDHPLFQYPDECFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVR 180
                DH   ++ D+CF LVPE +PLY PLPP NWEIQSN+VPV+EDSN+KVGRYSEEVR
Sbjct: 121 -----DHHFHEFQDDCFGLVPEIKPLYQPLPPHNWEIQSNEVPVAEDSNIKVGRYSEEVR 180

Query: 181 KERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSI 240
           KERILRYLKKRNQRNF KTIKYACRKTLADRRIRVRGRFARNNEACDQ+ NP K N T I
Sbjct: 181 KERILRYLKKRNQRNFTKTIKYACRKTLADRRIRVRGRFARNNEACDQEPNPAK-NDTCI 240

Query: 241 HKVDTQLLYNQDHVGAQMKKDEEEWVEEMTGLMYLPYISS 268
             +D +L+YN + +G Q+KKDEEEW +EM  LMYLPY+SS
Sbjct: 241 LHMDNELVYNHE-LGVQLKKDEEEWEQEMRSLMYLPYMSS 258

[Close]

BLAST of Cp4.1LG04g02210 vs. ExPASy TrEMBL
Match: A0A6J1GNF3 (uncharacterized protein LOC111455505 OS=Cucurbita moschata OX=3662 GN=LOC111455505 PE=4 SV=1)

HSP 1 Score: 290 bits (743), Expect = 1.65e-95
Identity = 170/274 (62.04%), Postives = 197/274 (71.90%), Query Frame = 0


Query: 1   MASVPQFFYTDYTTT-TSIIPNDFCEQRPPPTAP---ALGGGVLWGEETLVPLFDDFGLH 60
           MAS+PQF Y+DYT T  ++  ND  +  PPPT P   A  GG  WGEETLVPLF +FGL 
Sbjct: 1   MASIPQF-YSDYTPTGAAMFANDLYD-LPPPTTPSTAATPGGPFWGEETLVPLFHEFGLL 60

Query: 61  HQPPISPS-QYS-SDKPGLTPTSFPHQDMIALPELNTPSICATNNAAPCQSFCVGYQPDD 120
           H P +SPS QY   DKP   PT     D  + P+LN PSI    N   CQ+ C+     D
Sbjct: 61  HPPSLSPSPQYCCDDKP--PPTLSSAIDPTSFPQLNIPSI----NGG-CQNSCL-----D 120

Query: 121 HPLFQYPDECFRLVPETEPLYHPLPPDNWEIQSNQVPVSEDSNMKVGRYSEEVRKERILR 180
           H   ++ D+CF LVPE +PL+ PLPP NWEIQSN+VPV+EDSNMKV RYSEEVRK+RILR
Sbjct: 121 HHFHEFQDDCFGLVPEMKPLHQPLPPHNWEIQSNEVPVAEDSNMKVARYSEEVRKQRILR 180

Query: 181 YLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQ 240
           YLKKRNQRNF KTIKYACRKTLADRRIRVRGRFARNNEACDQ+ NP K N T I  +D +
Sbjct: 181 YLKKRNQRNFTKTIKYACRKTLADRRIRVRGRFARNNEACDQEPNPAK-NDTCILHMDNE 240

Query: 241 LLYNQDHVGAQMKKDEEEWVEEMTGLMYLPYISS 268
           L+YN + +G Q+KKDEEEW +EM  L YLP ISS
Sbjct: 241 LVYNHE-LGVQLKKDEEEWEQEMRSLKYLPCISS 258

[Close]

BLAST of Cp4.1LG04g02210 vs. ExPASy TrEMBL
Match: A0A0A0K3I7 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237850 PE=4 SV=1)

HSP 1 Score: 261 bits (666), Expect = 1.32e-83
Identity = 166/287 (57.84%), Postives = 196/287 (68.29%), Query Frame = 0


Query: 1   MASVPQFFYTD--YTTTTSIIPNDFCEQRPPPTAPALGGGVLWGEET----LVPLFDD-- 60
           MAS+P  FY D  YT+  +          PPPT P++G G  WG+ET    LVPL +D  
Sbjct: 1   MASIPDQFYHDDQYTSLAA----------PPPTTPSVGIG--WGDETADDNLVPLLEDDN 60

Query: 61  FG-LHHQPPISPSQY--SSDKPGLTPTSFPHQDMIA-LPELNTPSICATNNAAPCQSFC- 120
           FG LHHQP   P+QY  SS+       SFP QDM+   P  ++         + CQ F  
Sbjct: 61  FGALHHQPYTHPNQYYCSSNVIDSATWSFPQQDMLPPFPSAHSHQNNKNARGSSCQDFNS 120

Query: 121 -VGYQPDDHPLF-QYPDECFRLVPETEPLYH--PLPPDNWEIQSNQVPVSEDSNMKVGRY 180
            +G Q  DH LF ++ D+CF LVPE +P ++  PLP  NW+ QSNQV V+EDSNMKVGRY
Sbjct: 121 HLGCQLPDHQLFSEFHDDCFGLVPEIKPSFYNNPLPTHNWDNQSNQVSVAEDSNMKVGRY 180

Query: 181 SEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAC-DQQLNPT- 240
           SEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFAR NEA  DQ+LNPT 
Sbjct: 181 SEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARKNEAISDQELNPTI 240

Query: 241 KINHTSIHKVDTQLLYNQDHVGAQMKKDEEEWVEEMTGLMYLPYISS 268
           K N T+I K DT+LLYN    G QMK DEEEW+++++ LMYLPYISS
Sbjct: 241 KNNDTTIQK-DTELLYNHHDFGVQMKGDEEEWLQDISSLMYLPYISS 274

[Close]

BLAST of Cp4.1LG04g02210 vs. TAIR 10
Match: AT3G12890.1 (activator of spomin::LUC2 )

HSP 1 Score: 119.8 bits (299), Expect = 3.4e-27
Identity = 67/143 (46.85%), Postives = 94/143 (65.73%), Query Frame = 0


Query: 123 ECFRLVPETEPLYHPLPPD-NWEIQSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKRNQ 182
           E +   PE +PL+ P   + +W   +++  +  + N KVGRYS E RK+RI+RYLKK+NQ
Sbjct: 95  EYYGFSPEIKPLFRPATGEQSW--GNSEGGIQAEPNTKVGRYSVEERKDRIMRYLKKKNQ 154

Query: 183 RNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHTSIHKVDTQLLYNQDH 242
           RNFNKTIKY CRKTLADRR+RVRGRFARNN+ C++Q + +K NH +  + +  +    D 
Sbjct: 155 RNFNKTIKYVCRKTLADRRVRVRGRFARNNDTCEEQPHMSK-NHNNHSEKEEDMFSGSDD 214

Query: 243 VGAQMKKDEEEWVEEMTGLMYLP 265
              QM+ D+    E M+ L+  P
Sbjct: 215 YLIQMEHDDGWLHEAMSNLIPFP 234

[Close]

BLAST of Cp4.1LG04g02210 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 92.8 bits (229), Expect = 4.4e-19
Identity = 46/70 (65.71%), Postives = 56/70 (80.00%), Query Frame = 0


Query: 146 QSNQVPVSEDSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRG 205
           +++ +P SE+ N KVGRYS E RKE+I +Y  KRNQRNF KTIKYACRKTLAD R R+RG
Sbjct: 193 ENSTMPFSEEQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIRG 252

Query: 206 RFARNNEACD 216
           RFARN+E  +
Sbjct: 253 RFARNDEVVE 262

[Close]

BLAST of Cp4.1LG04g02210 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 84.0 bits (206), Expect = 2.1e-16
Identity = 54/103 (52.43%), Postives = 70/103 (67.96%), Query Frame = 0


Query: 154 EDSNM-KVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNE 213
           EDS + KVG+ S E RKE+I RY+KKRN+RNFNK IKYACRKTLAD R RVRGRFA+N+E
Sbjct: 296 EDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDE 355

Query: 214 ACDQQLNPTKINHTSIHKVDTQLLYNQDHVGAQMKKDEEEWVE 256
             +    P +   +S H  +     ++D +G    KDEE+ V+
Sbjct: 356 FGE----PNRQAFSSHHDDE-----DEDDMGV---KDEEQLVD 386

[Close]

BLAST of Cp4.1LG04g02210 vs. TAIR 10
Match: AT2G33350.2 (CCT motif family protein )

HSP 1 Score: 84.0 bits (206), Expect = 2.1e-16
Identity = 54/103 (52.43%), Postives = 70/103 (67.96%), Query Frame = 0


Query: 154 EDSNM-KVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNE 213
           EDS + KVG+ S E RKE+I RY+KKRN+RNFNK IKYACRKTLAD R RVRGRFA+N+E
Sbjct: 295 EDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDE 354

Query: 214 ACDQQLNPTKINHTSIHKVDTQLLYNQDHVGAQMKKDEEEWVE 256
             +    P +   +S H  +     ++D +G    KDEE+ V+
Sbjct: 355 FGE----PNRQAFSSHHDDE-----DEDDMGV---KDEEQLVD 385

[Close]

BLAST of Cp4.1LG04g02210 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 82.4 bits (202), Expect = 6.0e-16
Identity = 48/87 (55.17%), Postives = 61/87 (70.11%), Query Frame = 0


Query: 154 EDSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA 213
           ++ +++VGRYS E RKE+I +Y  KR QRNF KTIKYACRKTLAD R RVRGRFARN+E 
Sbjct: 178 DEQSLRVGRYSSEERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDEV 237

Query: 214 CDQQLNPTKINHTSIHKVDTQLLYNQD 241
            +   NP KI  +   + +   L+N D
Sbjct: 238 FE---NP-KIASSFTRQENDDDLWNLD 260

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g02210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHH8	1.4e-06	27.16	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2...	[more]
O50055	1.0e-04	46.15	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]
Q9SK53	1.4e-04	50.00	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
Q9LKL2	2.3e-04	48.08	Two-component response regulator-like APRR1 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q39057	3.0e-04	39.02	Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1	[more]

BLAST of Cp4.1LG04g02210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023530352.1	4.32e-200	100.00	zinc finger protein CONSTANS-LIKE 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989100.1	9.39e-195	96.64	zinc finger protein CONSTANS-LIKE 5-like [Cucurbita maxima]	[more]
KAG7023006.1	1.89e-192	96.28	Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. argy...	[more]
KAG6589308.1	2.20e-191	95.54	Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022930639.1	1.27e-190	95.54	zinc finger protein CONSTANS-LIKE 5-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG04g02210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JLF7	4.55e-195	96.64	zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1ES17	6.17e-191	95.54	zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1I2H1	5.30e-99	62.14	uncharacterized protein LOC111468419 OS=Cucurbita maxima OX=3661 GN=LOC111468419...	[more]
A0A6J1GNF3	1.65e-95	62.04	uncharacterized protein LOC111455505 OS=Cucurbita moschata OX=3662 GN=LOC1114555...	[more]
A0A0A0K3I7	1.32e-83	57.84	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237850 PE=4 SV...	[more]

BLAST of Cp4.1LG04g02210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12890.1	3.4e-27	46.85	activator of spomin::LUC2	[more]
AT5G41380.1	4.4e-19	65.71	CCT motif family protein	[more]
AT2G33350.1	2.1e-16	52.43	CCT motif family protein	[more]
AT2G33350.2	2.1e-16	52.43	CCT motif family protein	[more]
AT1G63820.1	6.0e-16	55.17	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 168..210 e-value: 1.7E-16 score: 60.1
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 168..210 score: 14.8622
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 1..268
None	No IPR available	PANTHER	PTHR31717:SF56	ACTIVATOR OF SPOMIN::LUC2	coord: 1..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g02210.1	Cp4.1LG04g02210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding