Cp4.1LG04g02150 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g02150
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptiontranslationally-controlled tumor protein homolog
LocationCp4.1LG04: 2513629 .. 2515087 (-)
RNA-Seq ExpressionCp4.1LG04g02150
SyntenyCp4.1LG04g02150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAACAAATCTATTAAAAGAATAATTATAATACACCATTTTAAATGGCAAATCTTAAGAGCTTACTAGTTTTTGTTAGTGTTTTGAACATCAATTTTGTATATTAAGGACCAAATTCAGAATCCCACTTCGATTCGGTTTCTTCCTTCTCTGTGCCTATAAACATTCACCGCCCCTAGCGTTCTCCTTACGCTCTCTTTCTTTCTTCACCTTTTCCACTCTCCCTTTATTCTTCCATTCTCTCCCTCCTCCAATTTTGTTTGCAACCATGATCGTCTACCAGGACCAACTTACAGGTACTTCCCCCCTCTCCTTCTTCAATTCCCCCTTTGCATCCTTCTTCGTTTCTGTTTCGCTCTTACTGTTGCTCCCAATCTTGCTCCCCCAAGAAATTTTATCCTTCTTTATGTATTGGATCATTCAATGGTGAAGTTTGGATTAGTTTGGAGCTTTTAGGTGTTCTGTTTGTGTGCTTGACTAGACTCCATTAATGAACTCAGGTGATGAACTTCTGTCAGACTCCTTCCCATACAAGGAGATTGAGAATGAGATGTTGTGGGAAGTGGAAGGAAAGGTAAGGAAACTGACATATTCTTCTAGTAATCTGCAAGTCTATTGATTCAACTAATAACGAATCATAGATGAAGTTTTTTCGATACCGACACGAGTTTAATCCCTGTGTTTTGTTTATTTGTCTGGAGTTTCTTATTCTGGGTAATTTGACATTTGGATAACAGTGGATTGTACAAGGAGCAGTGGACGTAGACATTGGGGCGAACCCGTCTGCAGAAGGAGGTGAAGAAGATGAATGCGTGGATGAAGAAGCTGTGAAGGTTGTGGATATTGTCGACACCTTCAGACTTCAGGTAAGAAAGAGTTGTGTTTTTCATTTCATTGGTATATAGTTTGGTTTTGAATGAATTGGGTAAGAGAGGAGTGTTGTGTGTGTGGGCATATATATTGGCAGGAACAACCTCCATTTGACAAGAAGCAGTTTATCACATACATGAAAAGATACATAAAGCTTCTAACTCCCAAACTGGATGAAGAGAAACAAGAGGTGTTTAAGAAGCACATTCCAGAGGCAACCAAGTTCCTGCTGAGCAAGATCAATGACCTCCAATTGTAAGTTAAAGCTTTGTTTATTGTTAGGACACATCAAGAAGTTTGGTTATTAAGCTCAAATGGGTTGAATTGAATGCAGCTTTGTGGGGGAAGGCATGCATGATGATGCAGCTCTGGTTTTTGCATACTACAAAGAAGGGGCGACTGATCCTACATTTATCTATATTGCCTATGGGTTGAAGGAAGTCAAGTGCTGAAGGAATCCCATCTTTTTCTGCTCGCAATACTTCTCTTTTTCTTTTTTATATTCTAAGCTAATTTACATCAACTGTATGCCCCCAATCCCAAAATACAATATACTATAATATAATATATGGCATGCATTATTTTATCAT

mRNA sequence

CTAACAAATCTATTAAAAGAATAATTATAATACACCATTTTAAATGGCAAATCTTAAGAGCTTACTAGTTTTTGTTAGTGTTTTGAACATCAATTTTGTATATTAAGGACCAAATTCAGAATCCCACTTCGATTCGGTTTCTTCCTTCTCTGTGCCTATAAACATTCACCGCCCCTAGCGTTCTCCTTACGCTCTCTTTCTTTCTTCACCTTTTCCACTCTCCCTTTATTCTTCCATTCTCTCCCTCCTCCAATTTTGTTTGCAACCATGATCGTCTACCAGGACCAACTTACAGGTGATGAACTTCTGTCAGACTCCTTCCCATACAAGGAGATTGAGAATGAGATGTTGTGGGAAGTGGAAGGAAAGTGGATTGTACAAGGAGCAGTGGACGTAGACATTGGGGCGAACCCGTCTGCAGAAGGAGGTGAAGAAGATGAATGCGTGGATGAAGAAGCTGTGAAGGTTGTGGATATTGTCGACACCTTCAGACTTCAGGAACAACCTCCATTTGACAAGAAGCAGTTTATCACATACATGAAAAGATACATAAAGCTTCTAACTCCCAAACTGGATGAAGAGAAACAAGAGGTGTTTAAGAAGCACATTCCAGAGGCAACCAAGTTCCTGCTGAGCAAGATCAATGACCTCCAATTCTTTGTGGGGGAAGGCATGCATGATGATGCAGCTCTGGTTTTTGCATACTACAAAGAAGGGGCGACTGATCCTACATTTATCTATATTGCCTATGGGTTGAAGGAAGTCAAGTGCTGAAGGAATCCCATCTTTTTCTGCTCGCAATACTTCTCTTTTTCTTTTTTATATTCTAAGCTAATTTACATCAACTGTATGCCCCCAATCCCAAAATACAATATACTATAATATAATATATGGCATGCATTATTTTATCAT

Coding sequence (CDS)

ATGATCGTCTACCAGGACCAACTTACAGGTGATGAACTTCTGTCAGACTCCTTCCCATACAAGGAGATTGAGAATGAGATGTTGTGGGAAGTGGAAGGAAAGTGGATTGTACAAGGAGCAGTGGACGTAGACATTGGGGCGAACCCGTCTGCAGAAGGAGGTGAAGAAGATGAATGCGTGGATGAAGAAGCTGTGAAGGTTGTGGATATTGTCGACACCTTCAGACTTCAGGAACAACCTCCATTTGACAAGAAGCAGTTTATCACATACATGAAAAGATACATAAAGCTTCTAACTCCCAAACTGGATGAAGAGAAACAAGAGGTGTTTAAGAAGCACATTCCAGAGGCAACCAAGTTCCTGCTGAGCAAGATCAATGACCTCCAATTCTTTGTGGGGGAAGGCATGCATGATGATGCAGCTCTGGTTTTTGCATACTACAAAGAAGGGGCGACTGATCCTACATTTATCTATATTGCCTATGGGTTGAAGGAAGTCAAGTGCTGA

Protein sequence

MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECVDEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC
Homology
[Close]
BLAST of Cp4.1LG04g02150 vs. ExPASy Swiss-Prot
Match: Q5J907 (Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera OX=51953 GN=TCTP PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 4.0e-79
Identity = 141/168 (83.93%), Postives = 155/168 (92.26%), Query Frame = 0 

Query: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M+VYQD LTGDELLSDSFPYKEI N MLWEVEGKW++QGAV+VDIGANPSAEGGEEDE V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGV 60

Query: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           D++AVKVVDIVDTFRLQEQP FDKKQF+T+MKRYIK LTPKLD EKQE+FKKHI  ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSK++DLQFFVGE MHDD  LVFAYYK+GATDPTF+Y AYGLKE+KC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168

[Close]
BLAST of Cp4.1LG04g02150 vs. ExPASy Swiss-Prot
Match: Q9ZSW9 (Translationally-controlled tumor protein homolog OS=Hevea brasiliensis OX=3981 GN=TCTP PE=2 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 2.2e-77
Identity = 140/168 (83.33%), Postives = 154/168 (91.67%), Query Frame = 0 

Query: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M+VYQD LTGDELLSDSFPYKEI N +LWEVEGKW+VQGAVDVDIGANPSAEG +EDE V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           D++AVKVVDIVDTFRLQEQP FDKKQF+TYMKR+IKLLTPKLDEEKQE FKK+I  ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSK++DLQFFVGE MHDD +LVFAYY+ GATDPTF+Y AY LKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168

[Close]
BLAST of Cp4.1LG04g02150 vs. ExPASy Swiss-Prot
Match: P43349 (Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN=TCTP PE=2 SV=2)

HSP 1 Score: 282.3 bits (721), Expect = 3.5e-75
Identity = 135/168 (80.36%), Postives = 153/168 (91.07%), Query Frame = 0 

Query: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M+VYQD LTGDELLSDSFPYKEI+N MLWEV+GKW+VQGAVDV+IGANPSAEGG EDE V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           D++AVKVVDIVDTFRLQEQP FDKKQF+TY+KRYIK LTPKL+ E QE FKK+I  ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSK+ D QFFVGEGMHDD+ALVFAYYK+G+ DPTF+Y+A GLKE+KC
Sbjct: 121 LLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of Cp4.1LG04g02150 vs. ExPASy Swiss-Prot
Match: P35681 (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica OX=39947 GN=TCTP PE=1 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.3e-74
Identity = 133/168 (79.17%), Postives = 152/168 (90.48%), Query Frame = 0 

Query: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M+VYQD LTGDELLSDSFPY+EIEN +LWEV+GKW+VQGA+DVDIGANPSAEGG +DE V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGV 60

Query: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           D++AVKVVDIVDTFRLQEQPPFDKKQF+T+MKRYIK L+ KLD EKQE FKK+I  ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKY 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LL K+ DLQFFVGE MHDD  LVFAYYK+GATDPTF+Y ++GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168

[Close]
BLAST of Cp4.1LG04g02150 vs. ExPASy Swiss-Prot
Match: Q944T2 (Translationally-controlled tumor protein homolog OS=Glycine max OX=3847 GN=TCTP PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 3.0e-74
Identity = 137/168 (81.55%), Postives = 149/168 (88.69%), Query Frame = 0 

Query: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M+VYQD LTGDELLSDSF YKEIEN MLWEVEGKW+V+GAVDVDIGANPSAEGG EDE V
Sbjct: 1   MLVYQDLLTGDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           D+ AVKVVDIVDTFRLQEQP FDKKQF+T+MKR+IK LTPKLD E+QE+FKKHI  ATK+
Sbjct: 61  DDAAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLDAEQQELFKKHIEGATKY 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSKI D QFFVGE M DDA LVFAYYK+GA DPTF+Y AY LKEVKC
Sbjct: 121 LLSKIKDFQFFVGESMGDDACLVFAYYKDGAADPTFLYFAYALKEVKC 168

[Close]
BLAST of Cp4.1LG04g02150 vs. NCBI nr
Match: XP_023531839.1 (translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337 bits (864), Expect = 1.15e-116
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0 

Query: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV
Sbjct: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60

Query: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF
Sbjct: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168
           LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]
BLAST of Cp4.1LG04g02150 vs. NCBI nr
Match: XP_022970082.1 (translationally-controlled tumor protein homolog isoform X1 [Cucurbita maxima] >KAG6588561.1 Translationally-controlled tumor protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335 bits (860), Expect = 4.69e-116
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0 

Query: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV
Sbjct: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60

Query: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           +EEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF
Sbjct: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168
           LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]
BLAST of Cp4.1LG04g02150 vs. NCBI nr
Match: XP_022931729.1 (translationally-controlled tumor protein homolog isoform X1 [Cucurbita moschata] >KAG7022356.1 Translationally-controlled tumor protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 333 bits (855), Expect = 2.71e-115
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 0 

Query: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           MIVY DQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV
Sbjct: 1   MIVYHDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60

Query: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           +EEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF
Sbjct: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168
           LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]
BLAST of Cp4.1LG04g02150 vs. NCBI nr
Match: XP_022931730.1 (translationally-controlled tumor protein homolog isoform X2 [Cucurbita moschata] >XP_022970092.1 translationally-controlled tumor protein homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 319 bits (817), Expect = 1.37e-109
Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 9   TGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECVDEEAVKVV 68
           +GDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV+EEAVKVV
Sbjct: 3   SGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECVEEEAVKVV 62

Query: 69  DIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDL 128
           DIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDL
Sbjct: 63  DIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDL 122

Query: 129 QFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168
           QFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 123 QFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 162

[Close]
BLAST of Cp4.1LG04g02150 vs. NCBI nr
Match: XP_008450611.1 (PREDICTED: translationally-controlled tumor protein homolog [Cucumis melo] >KAA0050911.1 translationally-controlled tumor protein-like protein [Cucumis melo var. makuwa] >TYK10262.1 translationally-controlled tumor protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 308 bits (790), Expect = 2.22e-105
Identity = 150/168 (89.29%), Postives = 161/168 (95.83%), Query Frame = 0 

Query: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M++YQD LTGDELLSDSFPY EIEN MLWEVEGKW+VQGA+DVDIGANPSAEG +EDE V
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           D++AVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQE+FKK+IPEATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168
           L+SKINDLQFFVGEGMHDD  +VFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]
BLAST of Cp4.1LG04g02150 vs. ExPASy TrEMBL
Match: A0A6J1HY50 (translationally-controlled tumor protein homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469078 PE=3 SV=1)

HSP 1 Score: 335 bits (860), Expect = 2.27e-116
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0 

Query: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV
Sbjct: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60

Query: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           +EEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF
Sbjct: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168
           LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]
BLAST of Cp4.1LG04g02150 vs. ExPASy TrEMBL
Match: A0A6J1EV23 (translationally-controlled tumor protein homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437879 PE=3 SV=1)

HSP 1 Score: 333 bits (855), Expect = 1.31e-115
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 0 

Query: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           MIVY DQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV
Sbjct: 1   MIVYHDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60

Query: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           +EEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF
Sbjct: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168
           LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]
BLAST of Cp4.1LG04g02150 vs. ExPASy TrEMBL
Match: A0A6J1HY60 (translationally-controlled tumor protein homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469078 PE=3 SV=1)

HSP 1 Score: 319 bits (817), Expect = 6.65e-110
Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 9   TGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECVDEEAVKVV 68
           +GDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV+EEAVKVV
Sbjct: 3   SGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECVEEEAVKVV 62

Query: 69  DIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDL 128
           DIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDL
Sbjct: 63  DIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDL 122

Query: 129 QFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168
           QFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 123 QFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 162

[Close]
BLAST of Cp4.1LG04g02150 vs. ExPASy TrEMBL
Match: A0A6J1F0A0 (translationally-controlled tumor protein homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437879 PE=3 SV=1)

HSP 1 Score: 319 bits (817), Expect = 6.65e-110
Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 9   TGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECVDEEAVKVV 68
           +GDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV+EEAVKVV
Sbjct: 3   SGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECVEEEAVKVV 62

Query: 69  DIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDL 128
           DIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDL
Sbjct: 63  DIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDL 122

Query: 129 QFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168
           QFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 123 QFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 162

[Close]
BLAST of Cp4.1LG04g02150 vs. ExPASy TrEMBL
Match: A0A5D3CG94 (Translationally-controlled tumor protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004100 PE=3 SV=1)

HSP 1 Score: 308 bits (790), Expect = 1.07e-105
Identity = 150/168 (89.29%), Postives = 161/168 (95.83%), Query Frame = 0 

Query: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M++YQD LTGDELLSDSFPY EIEN MLWEVEGKW+VQGA+DVDIGANPSAEG +EDE V
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           D++AVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQE+FKK+IPEATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168
           L+SKINDLQFFVGEGMHDD  +VFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]
BLAST of Cp4.1LG04g02150 vs. TAIR 10
Match: AT3G05540.1 (Methionine sulfoxide reductase (MSS4-like) family protein )

HSP 1 Score: 268.1 bits (684), Expect = 4.8e-72
Identity = 129/169 (76.33%), Postives = 149/169 (88.17%), Query Frame = 0 

Query: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M+VYQD LTGDELLSDSFPYKEIEN MLWEVEGKW+V+GA+D DIGANP  EGG EDE V
Sbjct: 1   MLVYQDILTGDELLSDSFPYKEIENGMLWEVEGKWVVKGAMDFDIGANPGEEGG-EDEGV 60

Query: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           D++AVKVVDI+DTFRLQEQP FDKKQF+ +MKRYIK L+PKLD E QE+FKKHI  ATKF
Sbjct: 61  DDQAVKVVDIIDTFRLQEQPSFDKKQFVMFMKRYIKQLSPKLDSENQELFKKHIESATKF 120

Query: 121 LLSKINDLQFFVGEGMH-DDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SK+ D QFFVGE M  ++ +LVFAYY+EGATDPTF+Y+AYGLKE+KC
Sbjct: 121 LMSKLKDFQFFVGESMEGEEGSLVFAYYREGATDPTFLYLAYGLKEIKC 168

[Close]
BLAST of Cp4.1LG04g02150 vs. TAIR 10
Match: AT3G16640.1 (translationally controlled tumor protein )

HSP 1 Score: 265.0 bits (676), Expect = 4.1e-71
Identity = 129/168 (76.79%), Postives = 145/168 (86.31%), Query Frame = 0 

Query: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M+VYQD LTGDELLSDSFPYKEIEN +LWEVEGKW+  GAVDV+IGANPSAE G EDE V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGV 60

Query: 61  DEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           D+   KVVDIVDTFRLQEQP +DKK FI Y+K+YIKLLTPKL EE Q VFKK I  ATKF
Sbjct: 61  DDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LL +++D QFFVGEGMHDD+ LVFAYYKEG+T+PTF+Y A+GLKEVKC
Sbjct: 121 LLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g02150 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5J9074.0e-7983.93Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tener... [more]
Q9ZSW92.2e-7783.33Translationally-controlled tumor protein homolog OS=Hevea brasiliensis OX=3981 G... [more]
P433493.5e-7580.36Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN... [more]
P356811.3e-7479.17Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica... [more]
Q944T23.0e-7481.55Translationally-controlled tumor protein homolog OS=Glycine max OX=3847 GN=TCTP ... [more]
BLAST of Cp4.1LG04g02150 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023531839.11.15e-116100.00translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo][more]
XP_022970082.14.69e-11699.40translationally-controlled tumor protein homolog isoform X1 [Cucurbita maxima] >... [more]
XP_022931729.12.71e-11598.81translationally-controlled tumor protein homolog isoform X1 [Cucurbita moschata]... [more]
XP_022931730.11.37e-10998.75translationally-controlled tumor protein homolog isoform X2 [Cucurbita moschata]... [more]
XP_008450611.12.22e-10589.29PREDICTED: translationally-controlled tumor protein homolog [Cucumis melo] >KAA0... [more]
BLAST of Cp4.1LG04g02150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HY502.27e-11699.40translationally-controlled tumor protein homolog isoform X1 OS=Cucurbita maxima ... [more]
A0A6J1EV231.31e-11598.81translationally-controlled tumor protein homolog isoform X1 OS=Cucurbita moschat... [more]
A0A6J1HY606.65e-11098.75translationally-controlled tumor protein homolog isoform X2 OS=Cucurbita maxima ... [more]
A0A6J1F0A06.65e-11098.75translationally-controlled tumor protein homolog isoform X2 OS=Cucurbita moschat... [more]
A0A5D3CG941.07e-10589.29Translationally-controlled tumor protein-like protein OS=Cucumis melo var. makuw... [more]
BLAST of Cp4.1LG04g02150 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G05540.14.8e-7276.33Methionine sulfoxide reductase (MSS4-like) family protein [more]
AT3G16640.14.1e-7176.79translationally controlled tumor protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018105Translationally controlled tumour proteinPRINTSPR01653TCTPROTEINcoord: 46..57
score: 70.54
coord: 1..21
score: 62.76
coord: 60..79
score: 57.68
IPR018105Translationally controlled tumour proteinPFAMPF00838TCTPcoord: 1..164
e-value: 1.7E-57
score: 194.3
IPR018105Translationally controlled tumour proteinPANTHERPTHR11991TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATEDcoord: 1..168
IPR011323Mss4/translationally controlled tumour-associated TCTPGENE3D2.170.150.10Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain Acoord: 1..168
e-value: 1.1E-57
score: 196.9
NoneNo IPR availablePANTHERPTHR11991:SF11TRANSLATIONALLY-CONTROLLED TUMOR PROTEIN HOMOLOGcoord: 1..168
IPR018103Translationally controlled tumour protein, conserved sitePROSITEPS01003TCTP_2coord: 125..147
IPR018103Translationally controlled tumour protein, conserved sitePROSITEPS01002TCTP_1coord: 45..55
IPR034737Translationally controlled tumour protein (TCTP) domainPROSITEPS51797TCTP_3coord: 1..168
score: 59.257904
IPR011057Mss4-like superfamilySUPERFAMILY51316Mss4-likecoord: 1..168

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g02150.1Cp4.1LG04g02150.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005509 calcium ion binding