Cp4.1LG04g01890 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
ATGCTCTCCGCCACCGCCCCTGCCACCTCTCTCTCCGCGGCGGCTGCTCACACCACCACCACCACCACCACCTTCCTCCTCCATACTCCCCCTCTCCGCCTCTTCCTCCGCCGCCCACCAAACCTCATTTCCGCCTCTCTCAATCCTTACCCTTCCCCTTCCCCCTTAGTCGCCAAGCCACAAGTCTACCAGCCATTCCGCCCCCCTCCCTCTCCTCTTCCCTCTCAGTACCGCTCTCTCGACGCCGCCGGCAAGCTTGATGTTCTCGCCAACCGCCTCGGTCTCTGGTTCGAGTACGCGCCGCTAATTTCCTCCCTGATTCAAGAGGGCTTCACTCCCCCAACCATCGAAGAAATCACTGGAATCGGCGGAGTCCAGCAGAACACCCTCGTTGTTGGCGCTCAAGTTCGCGAATCCCTTGTCCAGACAATCAACGATGCTGATCCAGATTTAATTGCAGCTTTCGATACCGGCGGCGCCGAATTGCTCTATGAAATTCGGCTCCTCAACGCCGAGAAACGTGCGGCGGCGGCCAGATATATAGTGGATAACAGGCTGGATGGGAAGGGTGCGCAAGATCTGGCTCGAGCGATGAAGGATTTTCCTCGGCGAAGAGGGGATAAAGGTTGGGAGAGTTTCAACTACGATTATCCTGGGGATTGTTTAGCGTTTATGCATTACAGGTTGAGTAGAGAGTATAGCAATATGTCGGAGGCGAGGACGTCGGCGTTGGAGGACGCGTTGAAAGTAGCGGTAACAGAGGAAGCGAGAAGTCTGATTGTTAGGGATTTGGAGAGGGAAGGGGAGGGGAAAGATGAGGCGGAAGAGGAAATCGAAGCCGGTGTCAAGGTTCCGGTGGTGCGGTTGAAGATCGGGGAGGTAGCGGAGGCAACAACAGTGGTGGTGTTGCCTGTGTGCAATGGGGAGGAAGGGGGAAAGGGTGTCGGAGAGGCGCCAATGGAGGTGAGGAGTGAAGGGGAATTCGGGGTTGTGGTGGTGGAGGAGGGGTGGAGAAGGTGGGTGGTTCTGCCGGGGTGGGAGCCGATAGCAGGACTGGGGAAGGGAGGCGTGGTGGTGGCGTTCAAGGATGCGAGGGCTCTGCCATGGCGGGTGAATAGGTGGTACAAGGAGGAGGCAATTTTGGTGGTGGCTGATCGGAGTAGGAAAGAGGTGGAGGCCGGAGATGGGTTTTATCTGACGGGAGCGACCGGGAACGACGGGGAGTTGAAGGTTCAGAGAGGAAGTGAATTGATGGAAATGGGGTTGAAGGAGAGCTTAGGGACCGTGTTATTGGTGGTTAGGCCACCAAAGGACATGGACGATGATCAGTTGAGCGATGAAGATTGGGACTAA20040060080010001200Expect = 2.3E-22 / Score = 78.4Expect = 8.8E-35 / Score = 119.4Expect = 1.6E-34 / Score = 118.6Score = Score = SequencePF18579PF18087PF18578PTHR35299:SF3PTHR35299
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040781Rubisco accumulation factor 1, helix turn helix domainPFAMPF18579Raf1_HTHcoord: 82..141
e-value: 2.3E-22
score: 78.4
IPR040858Rubisco accumulation factor 1, C-terminalPFAMPF18087RuBisCo_chap_Ccoord: 284..437
e-value: 8.8E-35
score: 119.4
IPR041358Rubisco accumulation factor 1, alpha helical domainPFAMPF18578Raf1_Ncoord: 155..264
e-value: 1.6E-34
score: 118.6
NoneNo IPR availablePANTHERPTHR35299:SF3RUBISCO ACCUMULATION FACTOR 1.2, CHLOROPLASTICcoord: 1..450
IPR037494Rubisco accumulation factor 1PANTHERPTHR35299FAMILY NOT NAMEDcoord: 1..450