Cp4.1LG04g00600 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
GATTGATCCTCAGCCCTAATTTTGGCCAATGTTATAATCTCACTCTCGGGTTTAGGGTTTTTGCAGGTTAAAGCGTTTTCTCTGTCTCTCCCTCTCTCAAGATTGCAGTTTTTGGAATTTATTTGTCGTGCTGTGGAAGGGGGAATCTCAGAGGCGTATAGTGAGAGATGTTGGACATCAATTTGTTCAGGGAAGAGAAGGGCAACAATCCTGAAATCATTCGTGAGTCTCAACGCCGCCGATTTGCCAGCGTTGAACTCGTTGATGAAGTAATTAAGCTTGACAAGGAATGGCGTCAACGCCAATTTGAGCTTGAGAATCTCAGGAAGGAGTTCAATAAGATAAACAAGCAAATTGCTCAGCTCAGAATAGCTGGTGAGGATGCGTCGGAGAAGATTAAAGACACTGAAGAAAACAAAAAGTTGTCTGCAGAGAAAGACGTTGAAGCTAAGGATGTGTTAAAACAGTTGAATTCAAAATTGGAAATAATTGGAAACCTTGTGCACGATTCTGTTCCCGTCAGCAATGATGAGGCTAATAATGCTGTAATCAGATCGTGGGGTGAGAAACTGGTAAAACCAAAACTAAAGAATCATGTTGATCTTGTTGAGCTTCTTGGAATTGCAGATAGCAAAAAAGGTTCTGAAATAGCTGGTGGTAGAGGTTACTACCTCAAAGGAGATGGTGTGCGTTTGAACCAAGCTTTGATCAATTATGGCCTCGACTTTTTGGAGAAAAGGGGTTACACAGCAATGCAGACTCCTTTCTTCATGAGAAAAGATATCATGGCTAGATGTGCTCAACTAGCACAATTTGATGAAGAACTTTATAAAGTAACTGGTGAGGGGGATGATAAGTATCTAATTGCCACTGCTGAACAACCAATTTGTTCATATCATCTTGAAGATTGGATTCATCCTTCCCAGTTGCCTATAAGATATGCTGGGTATTCAACTTGCTTCCGCAAAGAAGCGGGTTCCCATGGTCGAGATACTCTTGGAATTTTCCGAGTTCACCAATTCGAGAAAATAGAGCAATTTTGTGTCACCAGCCCAAATGGCAATGATTCGTGGGACATGCATGAAGAGATGATTAAGAATTCTGAGGACTTCTACAAGACGTTAAATCTCCCATACCAAGTTGTGGCTATAGTTTCTGGTGCATTAAATGATGCGGCTGCCAAGAAATACGATCTGGAAGCATGGTTTCCTGCATCCCAGACTTACAGGGAGTTAGTATCCTGTTCAAATTGCACTGATTATCAGTCCAGAAGATTAGAGACCCGATTTGGTCAGAAAAAGAGCAACGAGCAGACAAAGCAATATGTGCACATGCTGAATTCCACGCTCACAGCAACAGAAAGGACTCTGTGCTGCATTCTTGAGAACTACCAGAAAGAAGATGGGGTGGAAATACCAGAAGTTCTACAACCATTTATGGGTGGAAAAACTTTTATGCCCTTCAAGGCGAAACCAACAACAAGCGATGCCAAAGGGAAGAAATCGAAGGCCTGATTGCATAATTTTCTTCTCTCCCATTTGATTTATAAAATTTCTGACTCAAGGAAAGGATATATTACTCAGTATTGTTGGAACTTCAAATTATCTTTTTGGTGGGCATGGAGTTATACGACACTAATAACAGATGGCTGTTCTTATTTATATGCTTCAATTGGCTGCCAATCGTTTTCATCAACCCTGTCAAGCAAGCCCAAAGCTGACTCCAGTAATGAAATTCATGGATCACTCCCACATGGTCTGGAAACTCTTATTTAGAAAATTCAGATTATTAGGTTTGAGATGAAATATTGCTATTTAACGCAGTTTTGGTATTATAATTTTATAGCTCTATCGTTTTTATTATCGTTTGATACATGGGAAGCGTTTTCAATAGTTTTCTTGGGAAAAATTGGAAGGTAACGATAGTTTTATGCAATTTTACCATTTTGGAGTTTCTGTTTTTTTTGGCAAATCTTATTATTATTAGTATTATTTGATTGAATTGGACTGGGAAAA200400600800100012001400160018002000Score = Expect = 5.6E-146 / Score = 487.8Score = Score = Score = 66.38Score = 59.79Score = 45.24Score = 61.66Score = 65.58Expect = 1.2E-185 / Score = 615.1Expect = 1.5E-147 / Score = 489.9Score = Expect = 7.6E-38 / Score = 130.3Expect = 4.7E-26 / Score = 91.1Expect = 4.0E-38 / Score = 132.2Score = 22.352781Expect = 0.0 / Score = 524.431Score = SequenceCoilG3DSA:3.30.930.10PTHR11778:SF18SSF55681PR00981PIRSF001529TIGR00414PTHR11778PF00587PF02403G3DSA:1.10.287.40PS50862cd00770SSF46589
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..83
NoneNo IPR availableGENE3D3.30.930.10Bira Bifunctional Protein; Domain 2coord: 110..440
e-value: 5.6E-146
score: 487.8
NoneNo IPR availablePANTHERPTHR11778:SF18BNAA09G03770D PROTEINcoord: 1..432
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 121..431
IPR002317Serine-tRNA ligase, type1PRINTSPR00981TRNASYNTHSERcoord: 339..355
score: 61.66
coord: 357..373
score: 65.58
coord: 268..280
score: 66.38
coord: 322..335
score: 45.24
coord: 280..293
score: 59.79
IPR002317Serine-tRNA ligase, type1PIRSFPIRSF001529Ser-tRNA_ligasecoord: 1..433
e-value: 1.2E-185
score: 615.1
IPR002317Serine-tRNA ligase, type1TIGRFAMTIGR00414TIGR00414coord: 1..424
e-value: 1.5E-147
score: 489.9
IPR002317Serine-tRNA ligase, type1PANTHERPTHR11778SERYL-TRNA SYNTHETASEcoord: 1..432
IPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)PFAMPF00587tRNA-synt_2bcoord: 221..408
e-value: 7.6E-38
score: 130.3
IPR015866Serine-tRNA synthetase, type1, N-terminalPFAMPF02403Seryl_tRNA_Ncoord: 1..112
e-value: 4.7E-26
score: 91.1
IPR042103Serine-tRNA synthetase, type1, N-terminal domain superfamilyGENE3D1.10.287.40coord: 1..109
e-value: 4.0E-38
score: 132.2
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 142..417
score: 22.352781
IPR033729Serine-tRNA ligase catalytic core domainCDDcd00770SerRS_corecoord: 124..424
e-value: 0.0
score: 524.431
IPR010978Class I and II aminoacyl-tRNA synthetase, tRNA-binding armSUPERFAMILY46589tRNA-binding armcoord: 1..117