Homology
BLAST of Cp4.1LG04g00300 vs. ExPASy Swiss-Prot
Match:
A4FV84 (mRNA turnover protein 4 homolog OS=Bos taurus OX=9913 GN=MRTO4 PE=2 SV=1)
HSP 1 Score: 213.4 bits (542), Expect = 2.7e-54
Identity = 106/208 (50.96%), Postives = 146/208 (70.19%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y +++F+V NMRN K K++R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 K---LFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYV 120
K +FFG NKVM V+LGR+ S+E + L++VSK L G GL FTN KEEV+ F +Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVDEWFTKYT 120
Query: 121 DYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGK 180
+ DYAR G++AT V L GPLEQF H MEP LR+LGLP L KGVV L+SD+ VC+EG
Sbjct: 121 EMDYARAGNKATFTVNLDPGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180
Query: 181 SLSPESAGILRALGIRMATFRLNLVCRW 206
L+PE A +L+ G MA F++++ W
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVSIKYMW 208
BLAST of Cp4.1LG04g00300 vs. ExPASy Swiss-Prot
Match:
Q9UKD2 (mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=MRTO4 PE=1 SV=2)
HSP 1 Score: 209.1 bits (531), Expect = 5.0e-53
Identity = 104/208 (50.00%), Postives = 143/208 (68.75%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y +++F+V NMRN K K++R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 K---LFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYV 120
K +FFG NKVM V+LGR+ S+E + L++VSK L G GL FTN KEEV F +Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGK 180
+ DYAR G++A V L GPLEQF H MEP LR+LGLP L +GVV L+SD+ VC+EG
Sbjct: 121 EMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 181 SLSPESAGILRALGIRMATFRLNLVCRW 206
L+PE A +L+ G MA F++ + W
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMW 208
BLAST of Cp4.1LG04g00300 vs. ExPASy Swiss-Prot
Match:
Q9D0I8 (mRNA turnover protein 4 homolog OS=Mus musculus OX=10090 GN=Mrto4 PE=1 SV=1)
HSP 1 Score: 208.4 bits (529), Expect = 8.6e-53
Identity = 105/208 (50.48%), Postives = 144/208 (69.23%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y +++F+V NMRN K K++R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 K---LFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYV 120
K +FFG NKVM V+LGR+ S+E + L++VSK L G GL FTN KEEV F +Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGK 180
+ D+AR G++AT V L GPL+QF H MEP LR+LGLP L KGVV L+SD+ VC+EG
Sbjct: 121 EMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180
Query: 181 SLSPESAGILRALGIRMATFRLNLVCRW 206
L+PE A IL+ G MA F++ + W
Sbjct: 181 VLTPEQARILKLFGYEMAEFKVIIKYMW 208
BLAST of Cp4.1LG04g00300 vs. ExPASy Swiss-Prot
Match:
Q86HD3 (Ribosome assembly factor mrt4 OS=Dictyostelium discoideum OX=44689 GN=mrt4 PE=3 SV=1)
HSP 1 Score: 164.1 bits (414), Expect = 1.9e-39
Identity = 84/215 (39.07%), Postives = 130/215 (60.47%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQ- 60
M KSKR+ V ++K K E KK +V I+ V+ Y IY+FT ENMRN K K +R +
Sbjct: 1 MVKSKRNVVVNMTKVTKNPGEKKKKLVSTIKDIVDQYKFIYLFTFENMRNNKLKSVRTEW 60
Query: 61 --LKLFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYV 120
K FG NKV+ V LG++ +E++P L+K+++ L G GL FTN PK++V F Y
Sbjct: 61 STSKFLFGKNKVLSVGLGKSEEDELKPNLHKLTEHLEGECGLFFTNEPKDKVFEYFTNYS 120
Query: 121 DYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGK 180
+ D+ R+G + E + +KEGP+ +H ME LR LGLP L GV+ + ++T+CE G
Sbjct: 121 EKDFPRSGFVSEETITIKEGPIVGMTHSMETYLRGLGLPTTLKNGVIFVDREYTLCEAGV 180
Query: 181 SLSPESAGILRALGIRMATFRLNLVCRWSPGEFEL 213
+++PE + +L+ ++ F+ ++ W+ EF L
Sbjct: 181 AVTPEQSQLLKLFNHEISEFKFHIKGFWNEDEFTL 215
BLAST of Cp4.1LG04g00300 vs. ExPASy Swiss-Prot
Match:
Q7S302 (Ribosome assembly factor mrt4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=mrt4 PE=3 SV=1)
HSP 1 Score: 147.1 bits (370), Expect = 2.3e-34
Identity = 83/233 (35.62%), Postives = 127/233 (54.51%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
MPKSKR + L++ KK RE K+ + + IR+ + NY +VF+++NMRN K++R++L
Sbjct: 1 MPKSKRAKVYNLTQVTKKNREQKEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKEL 60
Query: 61 ---KLFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYV 120
++FFG K+ +LG T + GL K+SK L G+ GL FTN E++ F
Sbjct: 61 NDCRIFFGKTKLTARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLT 120
Query: 121 DYDYARTGSEATEKVELKEGPLEQ------------FSHEMEPSLRKLGLPVRLNKGVVE 180
D+AR GS AT + + GPL SH +EP LR+LG+P R+ KG V
Sbjct: 121 QVDFARAGSVATRTITIPSGPLYSTGGEVPAEHDVPVSHTLEPELRRLGMPTRMVKGKVC 180
Query: 181 L------VSDFTVCEEGKSLSPESAGILRALGIRMATFRLNLVCRWSPGEFEL 213
L D+ +C+EG++L +L+ I ++ FR+ L+ WS E+
Sbjct: 181 LGDEAGEGDDYVICKEGETLDSRQTRLLKLFSICLSEFRVKLLAYWSAASGEV 233
BLAST of Cp4.1LG04g00300 vs. NCBI nr
Match:
XP_023529350.1 (mRNA turnover protein 4 homolog [Cucurbita pepo subsp. pepo])
HSP 1 Score: 439 bits (1128), Expect = 5.75e-155
Identity = 225/229 (98.25%), Postives = 225/229 (98.25%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
Query: 61 K----LFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
K LFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61 KSSSRLFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG
Sbjct: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 225
KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA
Sbjct: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 229
BLAST of Cp4.1LG04g00300 vs. NCBI nr
Match:
XP_022933518.1 (mRNA turnover protein 4 homolog [Cucurbita moschata] >KAG6588508.1 mRNA turnover protein 4-like protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 437 bits (1125), Expect = 1.65e-154
Identity = 224/229 (97.82%), Postives = 225/229 (98.25%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
Query: 61 K----LFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
K LFFGANKVMQVSLGRTAS+EIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61 KSSSRLFFGANKVMQVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG
Sbjct: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 225
KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA
Sbjct: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 229
BLAST of Cp4.1LG04g00300 vs. NCBI nr
Match:
XP_022969955.1 (mRNA turnover protein 4 homolog [Cucurbita maxima])
HSP 1 Score: 434 bits (1117), Expect = 2.73e-153
Identity = 223/229 (97.38%), Postives = 224/229 (97.82%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
Query: 61 K----LFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
K LFFGANKVMQVSLGRTAS+EIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61 KSSSRLFFGANKVMQVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG
Sbjct: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 225
KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPD SDIETA
Sbjct: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDYSDIETA 229
BLAST of Cp4.1LG04g00300 vs. NCBI nr
Match:
XP_038902849.1 (mRNA turnover protein 4 homolog [Benincasa hispida])
HSP 1 Score: 419 bits (1078), Expect = 2.41e-147
Identity = 213/229 (93.01%), Postives = 222/229 (96.94%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
MPKSKRDRPVTLSKTKKKGREHKKSMV+LIRQAVENYNSI+VFTVENMRNLKFKELREQL
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVELIRQAVENYNSIFVFTVENMRNLKFKELREQL 60
Query: 61 K----LFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
K LFFGANKVMQVSLGR+AS EI+PGL+KVSKLLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61 KSSSRLFFGANKVMQVSLGRSASNEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
VDYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEG
Sbjct: 121 VDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 225
KSLSPESAGILRALGIRMATFRL+LVCRWSPG+FELYIDGPDNSD+E+A
Sbjct: 181 KSLSPESAGILRALGIRMATFRLHLVCRWSPGDFELYIDGPDNSDVESA 229
BLAST of Cp4.1LG04g00300 vs. NCBI nr
Match:
XP_022157470.1 (mRNA turnover protein 4 homolog [Momordica charantia])
HSP 1 Score: 412 bits (1060), Expect = 1.34e-144
Identity = 208/229 (90.83%), Postives = 220/229 (96.07%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
Query: 61 K----LFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
K LFFGANKVMQVSLGRT S+EI+PGL+K+SKLLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61 KSTSRLFFGANKVMQVSLGRTVSDEIRPGLHKISKLLHGNTGLCFTNLPKEEVERLFNEY 120
Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
DYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRKLG+PVRLNKGVVELVSDF VCEEG
Sbjct: 121 EDYDYARTGSTATEKVELKEGPLEQFSHEMEPSLRKLGMPVRLNKGVVELVSDFVVCEEG 180
Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 225
K+LSPESAGILRALGIRMA+FRLNLVCRWSPG+F+LYI+G DNSD+E+A
Sbjct: 181 KALSPESAGILRALGIRMASFRLNLVCRWSPGDFQLYIEGLDNSDVESA 229
BLAST of Cp4.1LG04g00300 vs. ExPASy TrEMBL
Match:
A0A6J1F4Z2 (Ribosome assembly factor mrt4 OS=Cucurbita moschata OX=3662 GN=LOC111440919 PE=3 SV=1)
HSP 1 Score: 437 bits (1125), Expect = 7.98e-155
Identity = 224/229 (97.82%), Postives = 225/229 (98.25%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
Query: 61 K----LFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
K LFFGANKVMQVSLGRTAS+EIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61 KSSSRLFFGANKVMQVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG
Sbjct: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 225
KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA
Sbjct: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 229
BLAST of Cp4.1LG04g00300 vs. ExPASy TrEMBL
Match:
A0A6J1I1E2 (Ribosome assembly factor mrt4 OS=Cucurbita maxima OX=3661 GN=LOC111468997 PE=3 SV=1)
HSP 1 Score: 434 bits (1117), Expect = 1.32e-153
Identity = 223/229 (97.38%), Postives = 224/229 (97.82%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
Query: 61 K----LFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
K LFFGANKVMQVSLGRTAS+EIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61 KSSSRLFFGANKVMQVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG
Sbjct: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 225
KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPD SDIETA
Sbjct: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDYSDIETA 229
BLAST of Cp4.1LG04g00300 vs. ExPASy TrEMBL
Match:
A0A6J1DT71 (Ribosome assembly factor mrt4 OS=Momordica charantia OX=3673 GN=LOC111024162 PE=3 SV=1)
HSP 1 Score: 412 bits (1060), Expect = 6.47e-145
Identity = 208/229 (90.83%), Postives = 220/229 (96.07%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
Query: 61 K----LFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
K LFFGANKVMQVSLGRT S+EI+PGL+K+SKLLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61 KSTSRLFFGANKVMQVSLGRTVSDEIRPGLHKISKLLHGNTGLCFTNLPKEEVERLFNEY 120
Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
DYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRKLG+PVRLNKGVVELVSDF VCEEG
Sbjct: 121 EDYDYARTGSTATEKVELKEGPLEQFSHEMEPSLRKLGMPVRLNKGVVELVSDFVVCEEG 180
Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 225
K+LSPESAGILRALGIRMA+FRLNLVCRWSPG+F+LYI+G DNSD+E+A
Sbjct: 181 KALSPESAGILRALGIRMASFRLNLVCRWSPGDFQLYIEGLDNSDVESA 229
BLAST of Cp4.1LG04g00300 vs. ExPASy TrEMBL
Match:
A0A6P5T8Z8 (Ribosome assembly factor mrt4 OS=Prunus avium OX=42229 GN=LOC110764858 PE=3 SV=1)
HSP 1 Score: 352 bits (904), Expect = 3.80e-121
Identity = 175/229 (76.42%), Postives = 205/229 (89.52%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
MPKSKRDRPVTLSKTKKKGREHK+++V+ IRQA E+Y+S+YVF+ ENMRNLKFKE R+QL
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKETIVNSIRQAAEDYSSVYVFSFENMRNLKFKEFRDQL 60
Query: 61 K----LFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
K F G+NKVMQ+SLGR+ S+EI+P L+K+SK+LHGN GLCFTNLPKEEVERLFNEY
Sbjct: 61 KSSSRFFLGSNKVMQISLGRSDSDEIRPDLHKISKVLHGNAGLCFTNLPKEEVERLFNEY 120
Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
+YD+ARTGS ATEKVEL+EGPLEQF+HEMEP LRK G+PVRLNKGVVELVSDF VC+EG
Sbjct: 121 KEYDFARTGSIATEKVELQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFLVCDEG 180
Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 225
KSLSPESA ILR LGI+MATFRL+L+ RWSPGEFELY GPD+S +E++
Sbjct: 181 KSLSPESARILRLLGIKMATFRLHLISRWSPGEFELYGPGPDDSGVESS 229
BLAST of Cp4.1LG04g00300 vs. ExPASy TrEMBL
Match:
A0A6P4AGB2 (Ribosome assembly factor mrt4 OS=Ziziphus jujuba OX=326968 GN=LOC107427781 PE=3 SV=1)
HSP 1 Score: 352 bits (903), Expect = 5.39e-121
Identity = 174/229 (75.98%), Postives = 204/229 (89.08%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
MPKSKRDRPVTLSKTKKKGREHK+++V+ IRQAVE+Y+SIYVF ENMRNLKFKE RE++
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKEAIVNAIRQAVEDYSSIYVFKFENMRNLKFKEFREKM 60
Query: 61 K----LFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
K F G+NKVMQVSLGR+A++E++PG+YKVSKLL G+ GLCFTNL KEEVERLFNEY
Sbjct: 61 KSTSRFFLGSNKVMQVSLGRSAADEMRPGIYKVSKLLRGDAGLCFTNLAKEEVERLFNEY 120
Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
DYD+ RTGS ATEKVELKEGPL+QFSHEMEP LRK G+PVRLNKGVVELV+D+ VCEEG
Sbjct: 121 EDYDFGRTGSIATEKVELKEGPLDQFSHEMEPFLRKQGMPVRLNKGVVELVADYVVCEEG 180
Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 225
K LSPE+A ILR LGI+MATFRL+L+CRWSP +FELYID P +SD+E++
Sbjct: 181 KPLSPEAARILRLLGIKMATFRLHLICRWSPSDFELYIDAPGDSDVESS 229
BLAST of Cp4.1LG04g00300 vs. TAIR 10
Match:
AT1G25260.1 (Ribosomal protein L10 family protein )
HSP 1 Score: 314.7 bits (805), Expect = 6.0e-86
Identity = 159/235 (67.66%), Postives = 192/235 (81.70%), Query Frame = 0
Query: 1 MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
MPKSKRDRPVTLSKTKKKGREHK+ +V+ IR+AVE Y+S+YVF+ ENMRN+KFKE R+Q
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQF 60
Query: 61 ----KLFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
K F G+NKVMQV+LGR+A +E++ G+YKVSKLL G+TGL T++PKEEVE LFN Y
Sbjct: 61 RHNGKFFLGSNKVMQVALGRSAEDELRSGIYKVSKLLRGDTGLLVTDMPKEEVESLFNAY 120
Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
D D++RTGS A E VELKEGPLEQF+HEMEP LRKL +PVRLNKG VELV+DF VCEEG
Sbjct: 121 EDSDFSRTGSIAVETVELKEGPLEQFTHEMEPLLRKLEMPVRLNKGTVELVADFVVCEEG 180
Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDG------PDNSDIETA 226
K LSP+SA ILR L ++MATF+LNL+CRWSP +FELY + D SD+ET+
Sbjct: 181 KQLSPKSAHILRLLRMKMATFKLNLLCRWSPSDFELYREDLSELYREDLSDVETS 235
BLAST of Cp4.1LG04g00300 vs. TAIR 10
Match:
AT3G11250.1 (Ribosomal protein L10 family protein )
HSP 1 Score: 62.8 bits (151), Expect = 4.1e-10
Identity = 49/192 (25.52%), Postives = 89/192 (46.35%), Query Frame = 0
Query: 17 KKGREHKKSMVDL-IRQAVENYNSIYVFTVENMRNLKFKELREQLK----LFFGANKVMQ 76
K + KK D + Q ++ Y I V +N+ + + + +R+ L+ + G N +M+
Sbjct: 3 KATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMK 62
Query: 77 VSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEK 136
S+ + + + LL GN GL FT +EV +Y AR G A
Sbjct: 63 RSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 122
Query: 137 VELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGIL 196
V ++ G + ++PS + L +P ++NKG VE+++ + ++G + A +L
Sbjct: 123 VVVQPG-----NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALL 182
Query: 197 RALGIRMATFRL 200
LGIR ++ L
Sbjct: 183 AKLGIRPFSYGL 189
BLAST of Cp4.1LG04g00300 vs. TAIR 10
Match:
AT3G09200.1 (Ribosomal protein L10 family protein )
HSP 1 Score: 62.4 bits (150), Expect = 5.4e-10
Identity = 49/192 (25.52%), Postives = 89/192 (46.35%), Query Frame = 0
Query: 17 KKGREHKKSMVDL-IRQAVENYNSIYVFTVENMRNLKFKELREQLK----LFFGANKVMQ 76
K + KK D + Q ++ Y I V +N+ + + + +R+ L+ + G N +M+
Sbjct: 3 KATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMK 62
Query: 77 VSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEK 136
S+ + + + LL GN GL FT +EV +Y AR G A
Sbjct: 63 RSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 122
Query: 137 VELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGIL 196
V ++ G + ++PS + L +P ++NKG VE+++ + ++G + A +L
Sbjct: 123 VVVQPG-----NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALL 182
Query: 197 RALGIRMATFRL 200
LGIR ++ L
Sbjct: 183 AKLGIRPFSYGL 189
BLAST of Cp4.1LG04g00300 vs. TAIR 10
Match:
AT3G09200.2 (Ribosomal protein L10 family protein )
HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06
Identity = 39/146 (26.71%), Postives = 67/146 (45.89%), Query Frame = 0
Query: 58 EQLKLFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYV 117
E ++ + ++ + G TA + P LL GN GL FT +EV +Y
Sbjct: 23 EYTQILVRSVRIHSENTGNTAILNLLP-------LLQGNVGLIFTKGDLKEVSEEVAKYK 82
Query: 118 DYDYARTGSEATEKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFTVC 177
AR G A V ++ G + ++PS + L +P ++NKG VE+++ +
Sbjct: 83 VGAPARVGLVAPIDVVVQPG-----NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI 142
Query: 178 EEGKSLSPESAGILRALGIRMATFRL 200
++G + A +L LGIR ++ L
Sbjct: 143 KQGDKVGSSEAALLAKLGIRPFSYGL 156
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
A4FV84 | 2.7e-54 | 50.96 | mRNA turnover protein 4 homolog OS=Bos taurus OX=9913 GN=MRTO4 PE=2 SV=1 | [more] |
Q9UKD2 | 5.0e-53 | 50.00 | mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=MRTO4 PE=1 SV=2 | [more] |
Q9D0I8 | 8.6e-53 | 50.48 | mRNA turnover protein 4 homolog OS=Mus musculus OX=10090 GN=Mrto4 PE=1 SV=1 | [more] |
Q86HD3 | 1.9e-39 | 39.07 | Ribosome assembly factor mrt4 OS=Dictyostelium discoideum OX=44689 GN=mrt4 PE=3 ... | [more] |
Q7S302 | 2.3e-34 | 35.62 | Ribosome assembly factor mrt4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-... | [more] |
Match Name | E-value | Identity | Description | |
XP_023529350.1 | 5.75e-155 | 98.25 | mRNA turnover protein 4 homolog [Cucurbita pepo subsp. pepo] | [more] |
XP_022933518.1 | 1.65e-154 | 97.82 | mRNA turnover protein 4 homolog [Cucurbita moschata] >KAG6588508.1 mRNA turnover... | [more] |
XP_022969955.1 | 2.73e-153 | 97.38 | mRNA turnover protein 4 homolog [Cucurbita maxima] | [more] |
XP_038902849.1 | 2.41e-147 | 93.01 | mRNA turnover protein 4 homolog [Benincasa hispida] | [more] |
XP_022157470.1 | 1.34e-144 | 90.83 | mRNA turnover protein 4 homolog [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1F4Z2 | 7.98e-155 | 97.82 | Ribosome assembly factor mrt4 OS=Cucurbita moschata OX=3662 GN=LOC111440919 PE=3... | [more] |
A0A6J1I1E2 | 1.32e-153 | 97.38 | Ribosome assembly factor mrt4 OS=Cucurbita maxima OX=3661 GN=LOC111468997 PE=3 S... | [more] |
A0A6J1DT71 | 6.47e-145 | 90.83 | Ribosome assembly factor mrt4 OS=Momordica charantia OX=3673 GN=LOC111024162 PE=... | [more] |
A0A6P5T8Z8 | 3.80e-121 | 76.42 | Ribosome assembly factor mrt4 OS=Prunus avium OX=42229 GN=LOC110764858 PE=3 SV=1 | [more] |
A0A6P4AGB2 | 5.39e-121 | 75.98 | Ribosome assembly factor mrt4 OS=Ziziphus jujuba OX=326968 GN=LOC107427781 PE=3 ... | [more] |