Cp4.1LG03g12000 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGTGGTGAAAAAAAAAATCCCTTCTGTCTTCGGCGTCGCCCCATTTTCCGATTCTCTCTTTTTTCCTGTTTCGCTCAATCTCACCCATTGTCGCGGTTCGGCTGGAACAGAAAATCAGATCTCCTTTTAGCTTCTCAATTTGGTAATCGTATTTAGTTGATTCTTGGTTTAGTGGATTTGTAACTTGTTTCATACGATCTTGTGTTTTAGGATGTTTACATCTTCTTTGGGATTGTTTCTCTCTTCTTCTACTGAAGCTCATTGGCAGTAATTGGCATAGCATATGAGGAATTTATTCACTTTTTTGTCATTTTGATTGCAATGATCAGATAAATGAGCTTTATCCAGCTAGGAATTTGTTAAGTAGTTGAAATCCTGTTCAATTAGGTGCTTTCTGATTACTAGAATGTTATACTTCTTTAGCAGTATGAATCTTCAATCGGTGGATCAGACAAAGAAAATCTGGTCAAATTTAATCAAATATTAGGAACTTAAAGTCAAATTCAAACTTCACTTCATTTTCTTTCGGCAAATTTTAGAATATCCTTGTTTGGAACTAGAATTTATTGAATGAAATGGATTATTGATAAATTTACTTGAAGTGTTGATTTTCTTTCATCATGCTTTGCAATGTATTTGCAAATGTGGGGGAATTAGACGGTTTGTTTATTTCAACTTTGTCTTGACTTTGTCTCAACGTTGCATTTTCTCGATATTTTTCCCCCTTTATTTTCCATAGATGTGCTGTTTGAACATGTTTATGTATAGCATATTGAAAAGCATTAACAAAAATTTGTTGTTATTATTGGATAGTGTGGTGTTAAATTTTCAATTTTATTGTTTGAGGTGGTGGTTATATTAATGGCCTAAAATTGTAGAACATTAAGGTGTCCCAGCTTTCCTTTCTATAAATTGTTGGAAATTTCACTCAAGTTTTCAATTCATAATGTCCCAATTTGAGACTGTATGAAGAATATATTTCTGTCAGATAACCAAAAACTGAATTGAGTTGAACAGTTTCTTGTCGAGGGAACATTCGTACTAATGTCTGAAGAATATATTTTGTTTTGCCCTATACTGATTGAATATGCATTATGATAGAAATTTTTTATGTGCTATTATAGGAATTTGGTTGGAACATGGATGGAGAAATCCCCAACATAAAGAGATGGGTAGTTTTGTATCCCGTCTATATTAATTCAAAGAAGACAATAGCTGAAGGAAGACGTATCGGTGTTAGCAAAGCATGTGAGAATCCAACGTGTGCTGAGATTGGTGATTGCTGCAGTCATCTCAAACTGCCCTTTGCTATTGAGGTTTTCTGGCAATGATCTGTCATTGATTAAATCTTCCCTTCCTATTAATTTTTGTTCTCCCTGCTGTTTGTTTGGATTGAAGTTAGCTGCATCCTGCGTCGAGTTTATATGAGACTATGATCATTGATAGAATACGTTAATTCATGTTCTGAGCATTCCTGCAGATTGATAAAGCTTATCCTCGTGATTTCATGCAACGAGGGAGAGTGCGGGTTCTGCTGAAGAAGGAGGATGGAACTCTGTCAAATCCAGCTATTCCTTCCAGTAAGACTTATACTTGTCTCTTTGGACCCGTTTTATCCCTTGGGAAAAAAAAAATAGCTGTCTGTTTCCGATTAATATTGAAATAGTTATCTGTTTTTCATTAACAAAGTTATAATAAGCTATGAATCAAAGATATACTTATTAACTAAAGAAAAATACTGCTTCTAAATAATTTCTTTCGACATTCTACACGTTTATGAAAATGAGAACTTGCCCTCCAGTTTGATTGAAACACCTATGTCTTGTAGGAAGCATAGAATCAATTTGAGAATTCTGTTTGAAGCTCATTTCAAATCGAAAGTGGTAACAAAGCAGTGCTATTAGGTCTTGAACTTTAATAGATTGTTAAACTTTCTATTTTGTATCCAGTAGGTTTCTAAACTTTCAGTCTCGTTTCTATTTTGTATCCAGTAGGTTTCTAAACTTTCAATCTCGTGTACAATAGGTCCTTAATTTTTTTATTTTATGTCAAATAGGTTCCCTAAATTTTTAATGTTAATGACTTATTATACATTTTCTAAAATCTATCATACAAAAGTTCAAAATTTAGGGTCATATTCAAAACGAAACTTAATTTTATATCATATAGATCTATTAATTTATTCCTATTAGATGCAAGATTGAAATTCATGAATCTATTAAACATGAAATTATTAGACACATTTTAGGGTTTAGAAACTTGGGAGAAAACCCATAATTTAACCTAAAAGTATCTTATTCCCCTTTTGAGTTCTTATTGTCAATGGGAATACCCTAATGATTACAACTTTACATATGAGGTATGTGGCTATATTGCAGGAAAACAAATGATGCTTCGTATAGCCGAACTTGTTCCTAGACATCCTGGAAGGATAAAGAAGCAGGAGCCTGCATCATCATCAACTGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAATTACATTATGTAATTGCAAGAACCAGATTGTTAGCAACCAGGCAAGCAGTTTCATATTTAGGTCTTATTTCTTAATTCTTATCAACCTTTGAGTATTGGCGCTCTGCCCCTGCCCCCATCCGAAACGAAAACTACACAGTGGGTTTGTTTTGAACAATTTTGTAAAATAGTGGATCATGGAGTTTTACTGAGATGAATTTGCTGATAGGAGAAACGGATTATGGATGAGAATTAAGTTGAATGATCCACTCTTTTGCTTAAATCTTTCGAGATTGCCCGTCTTTGAATATGATCCAGGTTTCGAGATTGAAAAATGTGGAAATTTCTCAATATTTTTCCAGGGTCGGAATCTGGAAATATGAAAATATTGAGATCTTAGCTTATAATCTTGATCACAAACAGACTTGAAACTCTTTCCAGGTTTTGTGAAGATCAAGTTGTTTGTCATCTTCAGATTATTCAACATGAATTGGAGCTGTTCTTAGTGCACAGATACCTTCTTTTATACATATTGAATTTCTGGTGGTGGGTTATTTTGTGCC CGGTGGTGAAAAAAAAAATCCCTTCTGTCTTCGGCGTCGCCCCATTTTCCGATTCTCTCTTTTTTCCTGTTTCGCTCAATCTCACCCATTGTCGCGGTTCGGCTGGAACAGAAAATCAGATCTCCTTTTAGCTTCTCAATTTGGAATTTGGTTGGAACATGGATGGAGAAATCCCCAACATAAAGAGATGGGTAGTTTTGTATCCCGTCTATATTAATTCAAAGAAGACAATAGCTGAAGGAAGACGTATCGGTGTTAGCAAAGCATGTGAGAATCCAACGTGTGCTGAGATTGGTGATTGCTGCAGTCATCTCAAACTGCCCTTTGCTATTGAGATTGATAAAGCTTATCCTCGTGATTTCATGCAACGAGGGAGAGTGCGGGTTCTGCTGAAGAAGGAGGATGGAACTCTGTCAAATCCAGCTATTCCTTCCAGAAAACAAATGATGCTTCGTATAGCCGAACTTGTTCCTAGACATCCTGGAAGGATAAAGAAGCAGGAGCCTGCATCATCATCAACTGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAATTACATTATGTAATTGCAAGAACCAGATTGTTAGCAACCAGGCAAGCAGTTTCATATTTAGGTCTTATTTCTTAATTCTTATCAACCTTTGAGTATTGGCGCTCTGCCCCTGCCCCCATCCGAAACGAAAACTACACAGTGGGTTTGTTTTGAACAATTTTGTAAAATAGTGGATCATGGAGTTTTACTGAGATGAATTTGCTGATAGGAGAAACGGATTATGGATGAGAATTAAGTTGAATGATCCACTCTTTTGCTTAAATCTTTCGAGATTGCCCGTCTTTGAATATGATCCAGGTTTCGAGATTGAAAAATGTGGAAATTTCTCAATATTTTTCCAGGGTCGGAATCTGGAAATATGAAAATATTGAGATCTTAGCTTATAATCTTGATCACAAACAGACTTGAAACTCTTTCCAGGTTTTGTGAAGATCAAGTTGTTTGTCATCTTCAGATTATTCAACATGAATTGGAGCTGTTCTTAGTGCACAGATACCTTCTTTTATACATATTGAATTTCTGGTGGTGGGTTATTTTGTGCC ATGGATGGAGAAATCCCCAACATAAAGAGATGGGTAGTTTTGTATCCCGTCTATATTAATTCAAAGAAGACAATAGCTGAAGGAAGACGTATCGGTGTTAGCAAAGCATGTGAGAATCCAACGTGTGCTGAGATTGGTGATTGCTGCAGTCATCTCAAACTGCCCTTTGCTATTGAGATTGATAAAGCTTATCCTCGTGATTTCATGCAACGAGGGAGAGTGCGGGTTCTGCTGAAGAAGGAGGATGGAACTCTGTCAAATCCAGCTATTCCTTCCAGAAAACAAATGATGCTTCGTATAGCCGAACTTGTTCCTAGACATCCTGGAAGGATAAAGAAGCAGGAGCCTGCATCATCATCAACTGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAA MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQMMLRIAELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK Homology
BLAST of Cp4.1LG03g12000 vs. ExPASy Swiss-Prot
Match: P49964 (Signal recognition particle 19 kDa protein OS=Oryza sativa subsp. japonica OX=39947 GN=SRP19 PE=1 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 1.2e-49 Identity = 93/128 (72.66%), Postives = 111/128 (86.72%), Query Frame = 0
BLAST of Cp4.1LG03g12000 vs. ExPASy Swiss-Prot
Match: Q943Z6 (Signal recognition particle 19 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP19 PE=1 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 2.6e-49 Identity = 100/145 (68.97%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of Cp4.1LG03g12000 vs. ExPASy Swiss-Prot
Match: Q9D7A6 (Signal recognition particle 19 kDa protein OS=Mus musculus OX=10090 GN=Srp19 PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 5.0e-24 Identity = 64/131 (48.85%), Postives = 83/131 (63.36%), Query Frame = 0
BLAST of Cp4.1LG03g12000 vs. ExPASy Swiss-Prot
Match: P09132 (Signal recognition particle 19 kDa protein OS=Homo sapiens OX=9606 GN=SRP19 PE=1 SV=3) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-23 Identity = 65/131 (49.62%), Postives = 82/131 (62.60%), Query Frame = 0
BLAST of Cp4.1LG03g12000 vs. ExPASy Swiss-Prot
Match: Q5RBR1 (Signal recognition particle 19 kDa protein OS=Pongo abelii OX=9601 GN=SRP19 PE=1 SV=2) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-23 Identity = 65/131 (49.62%), Postives = 82/131 (62.60%), Query Frame = 0
BLAST of Cp4.1LG03g12000 vs. NCBI nr
Match: XP_023526150.1 (signal recognition particle 19 kDa protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 269 bits (687), Expect = 8.78e-91 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g12000 vs. NCBI nr
Match: XP_022955603.1 (signal recognition particle 19 kDa protein [Cucurbita moschata] >KAG7018547.1 Signal recognition particle 19 kDa protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 268 bits (684), Expect = 2.52e-90 Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g12000 vs. NCBI nr
Match: XP_022979984.1 (signal recognition particle 19 kDa protein [Cucurbita maxima]) HSP 1 Score: 267 bits (683), Expect = 3.58e-90 Identity = 132/134 (98.51%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g12000 vs. NCBI nr
Match: KAG6582147.1 (Signal recognition particle 19 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 268 bits (684), Expect = 1.09e-89 Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g12000 vs. NCBI nr
Match: XP_038879562.1 (signal recognition particle 19 kDa protein [Benincasa hispida]) HSP 1 Score: 262 bits (670), Expect = 3.44e-88 Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of Cp4.1LG03g12000 vs. ExPASy TrEMBL
Match: A0A6J1GUF8 (signal recognition particle 19 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111457558 PE=4 SV=1) HSP 1 Score: 268 bits (684), Expect = 1.22e-90 Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g12000 vs. ExPASy TrEMBL
Match: A0A6J1IY39 (signal recognition particle 19 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111479513 PE=4 SV=1) HSP 1 Score: 267 bits (683), Expect = 1.73e-90 Identity = 132/134 (98.51%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g12000 vs. ExPASy TrEMBL
Match: A0A1S3AYC2 (signal recognition particle 19 kDa protein OS=Cucumis melo OX=3656 GN=LOC103483920 PE=4 SV=1) HSP 1 Score: 259 bits (663), Expect = 1.95e-87 Identity = 128/134 (95.52%), Postives = 131/134 (97.76%), Query Frame = 0
BLAST of Cp4.1LG03g12000 vs. ExPASy TrEMBL
Match: A0A6J1CAM2 (signal recognition particle 19 kDa protein OS=Momordica charantia OX=3673 GN=LOC111009488 PE=4 SV=1) HSP 1 Score: 258 bits (660), Expect = 5.77e-87 Identity = 130/135 (96.30%), Postives = 132/135 (97.78%), Query Frame = 0
BLAST of Cp4.1LG03g12000 vs. ExPASy TrEMBL
Match: A0A0A0L5F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171080 PE=4 SV=1) HSP 1 Score: 258 bits (659), Expect = 7.64e-86 Identity = 128/134 (95.52%), Postives = 130/134 (97.01%), Query Frame = 0
BLAST of Cp4.1LG03g12000 vs. TAIR 10
Match: AT1G48160.1 (signal recognition particle 19 kDa protein, putative / SRP19, putative ) HSP 1 Score: 196.1 bits (497), Expect = 1.9e-50 Identity = 100/145 (68.97%), Postives = 114/145 (78.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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