Cp4.1LG03g01400 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g01400
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	PLATZ transcription factor family protein
Location	Cp4.1LG03: 1082355 .. 1083558 (-)
RNA-Seq Expression	Cp4.1LG03g01400
Synteny	Cp4.1LG03g01400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCGTGAGAGAGTTATGAGAATAAGGCAAAAGCTCACATTTTTTCCGATACCCATTTCCAATTTCGCTCATCCAGAGGAATTATCATATTGGTAAGCCAAAAAGGAATCACATTTATTTCTCTGTTTCTTCTTTCTTCTTTCCACATTCTCATTTCGTTTTGTTTTTGCTTTAAAATCGCAAAAAAGATGAAGCAGAAATCAGTAATGTCGGCGCCGCCGTGGCTTGAGCCATTACTCACCACGCCCTTCTTCTCAATCTGCCACACCCACAGCCACGCGGCTAGGAGCGAGCGGAATATGTACTGCCTCGATTGCCACACTGACGCATTCTGCTTTTACTGCCGCTCATCGCATCACAAGGACCATCAAGTCATTCAGGTTGGTATCATAACTTTTGGGAAATTCTAAGACATGGGTATTGTTAAGCATTGTTTTTGAAGAAATGGGTTGGTTTTTGATTGTGGAAATTGGTTTTAGATTAGGAGATCTTCGTATCATGATGTGGTGAGAGTTGCAGAGATCGAAGATGCTTTGGATATCAGTGGTGTCCAAACGTATGTGATTAATAGCGCGAGAGTGATGTTCTTAAACGAGAGGCCTCAGCCAAAAGCCGGGAAAGGAGGAGCTCATATCTGTGAAATTTGTGGGAGAAGCTTATTGGATCCATTTCGTTTCTGTTCCCTCGGCTGTAAGGTCAGCATTACTCTGTTCTTCATTCAATTCTTCATAATTCATCATCTTTTGGTATAATTTCTATGGCGTTTATAGCTGGTAGGGGTGAAGAGGAATGGGGAAGATGCGAGCTTTAACGTGGAGGCGAAGAAAGAGGCAATGGGGATGGAAAGAAGAGAAGGAATTTCATCGAGGAGAAGGAAGGGTATTCCTCATAGGGCACCTTTTGGGGGTTGATTCAATGCTGCCTTTCCAAACCAATTCTTTCCATGATTTGGGGTATTTGTCCATACAAATATAGGGTATGTCCCTAAAAATCGAAATAAAATGATTAATTTTGAAAGGGTATTTGGATGTGAAGAGGCAATAATGGAGGGATTGTTATGTTCATAATTGCTAGGTGTATATTTGTTTATTGAGAAATTAAAAATAAATAAAGAATAGAACATGTCCTTGTGGAGTCCGTTTCATGGTTTTTCATGGGCCCATTATCCACATGGGCCGTTTATATAAATAAATACTTTCATTCT

mRNA sequence

TCTCGTGAGAGAGTTATGAGAATAAGGCAAAAGCTCACATTTTTTCCGATACCCATTTCCAATTTCGCTCATCCAGAGGAATTATCATATTGATGAAGCAGAAATCAGTAATGTCGGCGCCGCCGTGGCTTGAGCCATTACTCACCACGCCCTTCTTCTCAATCTGCCACACCCACAGCCACGCGGCTAGGAGCGAGCGGAATATGTACTGCCTCGATTGCCACACTGACGCATTCTGCTTTTACTGCCGCTCATCGCATCACAAGGACCATCAAGTCATTCAGATTAGGAGATCTTCGTATCATGATGTGGTGAGAGTTGCAGAGATCGAAGATGCTTTGGATATCAGTGGTGTCCAAACGTATGTGATTAATAGCGCGAGAGTGATGTTCTTAAACGAGAGGCCTCAGCCAAAAGCCGGGAAAGGAGGAGCTCATATCTGTGAAATTTGTGGGAGAAGCTTATTGGATCCATTTCGTTTCTGTTCCCTCGGCTGTAAGCTGGTAGGGGTGAAGAGGAATGGGGAAGATGCGAGCTTTAACGTGGAGGCGAAGAAAGAGGCAATGGGGATGGAAAGAAGAGAAGGAATTTCATCGAGGAGAAGGAAGGGTATTCCTCATAGGGCACCTTTTGGGGGTTGATTCAATGCTGCCTTTCCAAACCAATTCTTTCCATGATTTGGGGTATTTGTCCATACAAATATAGGGTATGTCCCTAAAAATCGAAATAAAATGATTAATTTTGAAAGGGTATTTGGATGTGAAGAGGCAATAATGGAGGGATTGTTATGTTCATAATTGCTAGGTGTATATTTGTTTATTGAGAAATTAAAAATAAATAAAGAATAGAACATGTCCTTGTGGAGTCCGTTTCATGGTTTTTCATGGGCCCATTATCCACATGGGCCGTTTATATAAATAAATACTTTCATTCT

Coding sequence (CDS)

ATGAAGCAGAAATCAGTAATGTCGGCGCCGCCGTGGCTTGAGCCATTACTCACCACGCCCTTCTTCTCAATCTGCCACACCCACAGCCACGCGGCTAGGAGCGAGCGGAATATGTACTGCCTCGATTGCCACACTGACGCATTCTGCTTTTACTGCCGCTCATCGCATCACAAGGACCATCAAGTCATTCAGATTAGGAGATCTTCGTATCATGATGTGGTGAGAGTTGCAGAGATCGAAGATGCTTTGGATATCAGTGGTGTCCAAACGTATGTGATTAATAGCGCGAGAGTGATGTTCTTAAACGAGAGGCCTCAGCCAAAAGCCGGGAAAGGAGGAGCTCATATCTGTGAAATTTGTGGGAGAAGCTTATTGGATCCATTTCGTTTCTGTTCCCTCGGCTGTAAGCTGGTAGGGGTGAAGAGGAATGGGGAAGATGCGAGCTTTAACGTGGAGGCGAAGAAAGAGGCAATGGGGATGGAAAGAAGAGAAGGAATTTCATCGAGGAGAAGGAAGGGTATTCCTCATAGGGCACCTTTTGGGGGTTGA

Protein sequence

MKQKSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPFGG

Homology

[Close]

BLAST of Cp4.1LG03g01400 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.5e-28
Identity = 61/137 (44.53%), Postives = 87/137 (63.50%), Query Frame = 0


Query: 10  PPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDHQVIQIRRSS 69
           P WL+ L    FF  C  H  A ++ERN+ CLDC T + C +C  S H+ H+++Q+RR  
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCT-SLCPHCVPS-HRFHRLLQVRRYV 65

Query: 70  YHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLLDPFR 129
           YHDVVR+ +++  +D S VQ Y INSA+V+F+ +RPQ +  KG  + C  C RSL +P+ 
Sbjct: 66  YHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEPYI 125

Query: 130 FCSLGCKLVGVKRNGED 147
            CSLGCK+  V +   D
Sbjct: 126 HCSLGCKVDFVMKRYRD 140

[Close]

BLAST of Cp4.1LG03g01400 vs. NCBI nr
Match: XP_022935045.1 (uncharacterized protein At3g50808-like [Cucurbita moschata] >XP_023528012.1 uncharacterized protein At3g50808-like [Cucurbita pepo subsp. pepo] >XP_023528013.1 uncharacterized protein At3g50808-like [Cucurbita pepo subsp. pepo] >KAG7017400.1 hypothetical protein SDJN02_19265, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375 bits (964), Expect = 1.88e-131
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MKQKSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDH 60
           MKQKSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDH
Sbjct: 1   MKQKSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDH 60

Query: 61  QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120
           QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC
Sbjct: 61  QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120

Query: 121 GRSLLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPF 180
           GRSLLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPF
Sbjct: 121 GRSLLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPF 180

Query: 181 GG 182
           GG
Sbjct: 181 GG 182

[Close]

BLAST of Cp4.1LG03g01400 vs. NCBI nr
Match: XP_022983115.1 (uncharacterized protein At3g50808-like [Cucurbita maxima] >XP_022983117.1 uncharacterized protein At3g50808-like [Cucurbita maxima])

HSP 1 Score: 369 bits (947), Expect = 7.34e-129
Identity = 178/182 (97.80%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MKQKSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDH 60
           MKQKSVMSAPPWLEPLLTTPFFSICHTH+HAARSERNMYCLDCHTDAFCFYCRSSHHKDH
Sbjct: 1   MKQKSVMSAPPWLEPLLTTPFFSICHTHTHAARSERNMYCLDCHTDAFCFYCRSSHHKDH 60

Query: 61  QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120
           QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC
Sbjct: 61  QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120

Query: 121 GRSLLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPF 180
           GRSLLDPFRFCSLGCKLV VKR+GEDASFN+EAKKEAMGMERREGISSRRRKGIPHRAPF
Sbjct: 121 GRSLLDPFRFCSLGCKLVAVKRHGEDASFNLEAKKEAMGMERREGISSRRRKGIPHRAPF 180

Query: 181 GG 182
           GG
Sbjct: 181 GG 182

[Close]

BLAST of Cp4.1LG03g01400 vs. NCBI nr
Match: KAG6580644.1 (hypothetical protein SDJN03_20646, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 358 bits (919), Expect = 1.19e-124
Identity = 177/182 (97.25%), Postives = 177/182 (97.25%), Query Frame = 0


Query: 1   MKQKSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDH 60
           MKQKSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDH
Sbjct: 1   MKQKSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDH 60

Query: 61  QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120
           QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC
Sbjct: 61  QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120

Query: 121 GRSLLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPF 180
           GRSLLDPFRFCSLG     VKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPF
Sbjct: 121 GRSLLDPFRFCSLGW----VKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPF 178

Query: 181 GG 182
           GG
Sbjct: 181 GG 178

[Close]

BLAST of Cp4.1LG03g01400 vs. NCBI nr
Match: XP_038903535.1 (uncharacterized protein LOC120090101 isoform X2 [Benincasa hispida])

HSP 1 Score: 356 bits (913), Expect = 1.09e-123
Identity = 174/181 (96.13%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MKQKSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDH 60
           MKQKSVMSAPPWLEPLLTTPFFSICHTH  AARSERNMYCLDCH+DAFCFYCRSSHH DH
Sbjct: 1   MKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDH 60

Query: 61  QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120
           QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC
Sbjct: 61  QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120

Query: 121 GRSLLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPF 180
           GRSLLDPFRFCSLGCKLVGVKRNG DASFN+EAKKEAMG+ERREGISSRRRKGIPHRAPF
Sbjct: 121 GRSLLDPFRFCSLGCKLVGVKRNG-DASFNLEAKKEAMGIERREGISSRRRKGIPHRAPF 180

[Close]

BLAST of Cp4.1LG03g01400 vs. NCBI nr
Match: XP_038903534.1 (uncharacterized protein LOC120090101 isoform X1 [Benincasa hispida])

HSP 1 Score: 356 bits (913), Expect = 1.12e-123
Identity = 174/181 (96.13%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MKQKSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDH 60
           MKQKSVMSAPPWLEPLLTTPFFSICHTH  AARSERNMYCLDCH+DAFCFYCRSSHH DH
Sbjct: 2   MKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDH 61

Query: 61  QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120
           QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC
Sbjct: 62  QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 121

Query: 121 GRSLLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPF 180
           GRSLLDPFRFCSLGCKLVGVKRNG DASFN+EAKKEAMG+ERREGISSRRRKGIPHRAPF
Sbjct: 122 GRSLLDPFRFCSLGCKLVGVKRNG-DASFNLEAKKEAMGIERREGISSRRRKGIPHRAPF 181

[Close]

BLAST of Cp4.1LG03g01400 vs. ExPASy TrEMBL
Match: A0A6J1F9G7 (uncharacterized protein At3g50808-like OS=Cucurbita moschata OX=3662 GN=LOC111442031 PE=4 SV=1)

HSP 1 Score: 375 bits (964), Expect = 9.08e-132
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MKQKSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDH 60
           MKQKSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDH
Sbjct: 1   MKQKSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDH 60

Query: 61  QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120
           QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC
Sbjct: 61  QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120

Query: 121 GRSLLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPF 180
           GRSLLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPF
Sbjct: 121 GRSLLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPF 180

Query: 181 GG 182
           GG
Sbjct: 181 GG 182

[Close]

BLAST of Cp4.1LG03g01400 vs. ExPASy TrEMBL
Match: A0A6J1IYD5 (uncharacterized protein At3g50808-like OS=Cucurbita maxima OX=3661 GN=LOC111481760 PE=4 SV=1)

HSP 1 Score: 369 bits (947), Expect = 3.56e-129
Identity = 178/182 (97.80%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MKQKSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDH 60
           MKQKSVMSAPPWLEPLLTTPFFSICHTH+HAARSERNMYCLDCHTDAFCFYCRSSHHKDH
Sbjct: 1   MKQKSVMSAPPWLEPLLTTPFFSICHTHTHAARSERNMYCLDCHTDAFCFYCRSSHHKDH 60

Query: 61  QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120
           QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC
Sbjct: 61  QVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120

Query: 121 GRSLLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPF 180
           GRSLLDPFRFCSLGCKLV VKR+GEDASFN+EAKKEAMGMERREGISSRRRKGIPHRAPF
Sbjct: 121 GRSLLDPFRFCSLGCKLVAVKRHGEDASFNLEAKKEAMGMERREGISSRRRKGIPHRAPF 180

Query: 181 GG 182
           GG
Sbjct: 181 GG 182

[Close]

BLAST of Cp4.1LG03g01400 vs. ExPASy TrEMBL
Match: A0A1S3B782 (uncharacterized protein LOC103486541 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486541 PE=4 SV=1)

HSP 1 Score: 352 bits (903), Expect = 1.70e-122
Identity = 172/179 (96.09%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 3   QKSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDHQV 62
           QKSVMSAPPWLEPLLTTPFFSICHTH  AARSERNMYCLDCH+DAFCFYCRSSHH DHQV
Sbjct: 2   QKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQV 61

Query: 63  IQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGR 122
           IQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGR
Sbjct: 62  IQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGR 121

Query: 123 SLLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPFG 181
           SLLDPFRFCSLGCKLVGVKRNG DASFN+EAKKEAMG+ERREGISSRRRKGIPHRAPFG
Sbjct: 122 SLLDPFRFCSLGCKLVGVKRNG-DASFNLEAKKEAMGIERREGISSRRRKGIPHRAPFG 179

[Close]

BLAST of Cp4.1LG03g01400 vs. ExPASy TrEMBL
Match: A0A1S3B5Z6 (uncharacterized protein LOC103486541 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486541 PE=4 SV=1)

HSP 1 Score: 350 bits (898), Expect = 9.49e-122
Identity = 171/178 (96.07%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 4   KSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDHQVI 63
           KSVMSAPPWLEPLLTTPFFSICHTH  AARSERNMYCLDCH+DAFCFYCRSSHH DHQVI
Sbjct: 2   KSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVI 61

Query: 64  QIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRS 123
           QIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRS
Sbjct: 62  QIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRS 121

Query: 124 LLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPFG 181
           LLDPFRFCSLGCKLVGVKRNG DASFN+EAKKEAMG+ERREGISSRRRKGIPHRAPFG
Sbjct: 122 LLDPFRFCSLGCKLVGVKRNG-DASFNLEAKKEAMGIERREGISSRRRKGIPHRAPFG 178

[Close]

BLAST of Cp4.1LG03g01400 vs. ExPASy TrEMBL
Match: A0A0A0LDT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G746610 PE=4 SV=1)

HSP 1 Score: 349 bits (895), Expect = 2.72e-121
Identity = 170/178 (95.51%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 4   KSVMSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDHQVI 63
           KSVMSAPPWLEPLLTTPFFSICHTH  +ARSERNMYCLDCH+DAFCFYCRSSHH DHQVI
Sbjct: 2   KSVMSAPPWLEPLLTTPFFSICHTHGDSARSERNMYCLDCHSDAFCFYCRSSHHNDHQVI 61

Query: 64  QIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRS 123
           QIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRS
Sbjct: 62  QIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRS 121

Query: 124 LLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGISSRRRKGIPHRAPFG 181
           LLDPFRFCSLGCKLVGVKRNG DASFN+EAKKEAMG+ERREGISSRRRKGIPHRAPFG
Sbjct: 122 LLDPFRFCSLGCKLVGVKRNG-DASFNLEAKKEAMGIERREGISSRRRKGIPHRAPFG 178

[Close]

BLAST of Cp4.1LG03g01400 vs. TAIR 10
Match: AT2G27930.1 (PLATZ transcription factor family protein )

HSP 1 Score: 218.0 bits (554), Expect = 6.2e-57
Identity = 112/190 (58.95%), Postives = 131/190 (68.95%), Query Frame = 0


Query: 7   MSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDHQVIQIR 66
           M  P WLE LL T FFSIC  H    R+E NM+CL C   AFCFYCRSS H DH V+QIR
Sbjct: 1   MEEPKWLEGLLRTNFFSICPRHRETPRNECNMFCLSCQNAAFCFYCRSSFHIDHPVLQIR 60

Query: 67  RSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGA---------HIC 126
           RSSYHDVVRV+EIE+ALDI GVQTYVINSARV+FLNERPQPK    GA         + C
Sbjct: 61  RSSYHDVVRVSEIENALDIRGVQTYVINSARVLFLNERPQPKNSSHGAASSTPKTMSYFC 120

Query: 127 EICGRSLLDPFRFCSLGCKLVGVKRNGEDASFNVEAKKEAMGMERREGI-------SSRR 181
           E C R+LLDPFRFCSLGCK+ G+++N E+    +  +++    E  +G        +SRR
Sbjct: 121 ETCCRTLLDPFRFCSLGCKVEGMRKNKEEEEERLRKERQ---QETHKGTHPPTHTSNSRR 180

[Close]

BLAST of Cp4.1LG03g01400 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 189.1 bits (479), Expect = 3.1e-48
Identity = 99/198 (50.00%), Postives = 128/198 (64.65%), Query Frame = 0


Query: 10  PPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDHQVIQIRRSS 69
           P WL+PLL   FF  C  H+ + +SE NMYCLDC     C  C  S HKDH  IQIRRSS
Sbjct: 12  PHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLC-LSFHKDHHAIQIRRSS 71

Query: 70  YHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLLDPFR 129
           YHDV+RV+EI+  LDI+GVQTYVINSA+V+FLNERPQP+ GKG  + CE+C RSL+D FR
Sbjct: 72  YHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYRSLVDSFR 131

Query: 130 FCSLGCKLVGV-KRNGEDASFNVEAKKEAMG------MERREGIS--------------- 183
           FCSLGCK+ G+ K+  ++ + N+    ++        +++ + I                
Sbjct: 132 FCSLGCKISGISKKKRKEWTNNLSDSDDSYSSTSIGRLKKNDDIMNNSFTPSTPPLSAVN 191

[Close]

BLAST of Cp4.1LG03g01400 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein )

HSP 1 Score: 185.3 bits (469), Expect = 4.5e-47
Identity = 97/195 (49.74%), Postives = 121/195 (62.05%), Query Frame = 0


Query: 10  PPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDHQVIQIRRSS 69
           PPWL+PLL   FF  C  H  + +SE NMYCLDC     C  C  +HHKDH+ IQIRRSS
Sbjct: 34  PPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLC-LAHHKDHRTIQIRRSS 93

Query: 70  YHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLL-DPF 129
           YHDV+RV EI+  LDI G+QTYVINSA+V+FLNERPQP+ GKG  + C++C RSL+ D F
Sbjct: 94  YHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTCKVCYRSLVDDSF 153

Query: 130 RFCSLGCKLVGVKR-----------NGEDASFNVEAKKEAMGMERREGISS--------- 182
           RFCSLGCK+ G  R             ED+S ++   K    ++     +          
Sbjct: 154 RFCSLGCKIAGTSRGFEKGRENLLMETEDSSSSIAIGKNITNLQSFSPSTPPLTTSSNCR 213

[Close]

BLAST of Cp4.1LG03g01400 vs. TAIR 10
Match: AT1G76590.1 (PLATZ transcription factor family protein )

HSP 1 Score: 182.2 bits (461), Expect = 3.8e-46
Identity = 84/137 (61.31%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 7   MSAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDHQVIQIR 66
           ++ PPWL P+L   +F  C  H+ + +SE NM+CLDC ++AFC YC   +H++H+V+QIR
Sbjct: 15  LNPPPWLIPMLRANYFIPCSIHAASNKSECNMFCLDCSSEAFCSYC-LLNHRNHRVLQIR 74

Query: 67  RSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLLD 126
           RSSYH+VVRV EI+  +DIS VQTY+INSAR++FLNERPQP+ GKG  + CEIC RSLLD
Sbjct: 75  RSSYHNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPRIGKGVTNTCEICCRSLLD 134

Query: 127 PFRFCSLGCKLVGVKRN 144
            FRFCSLGCKL G+KR+
Sbjct: 135 SFRFCSLGCKLGGMKRD 150

[Close]

BLAST of Cp4.1LG03g01400 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-45
Identity = 83/147 (56.46%), Postives = 111/147 (75.51%), Query Frame = 0


Query: 8   SAPPWLEPLLTTPFFSICHTHSHAARSERNMYCLDCHTDAFCFYCRSSHHKDHQVIQIRR 67
           ++PPWL P+L   +F  C  H  + ++E N++CLDC  +AFC YC    HKDH+V+QIRR
Sbjct: 14  TSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVK-HKDHRVVQIRR 73

Query: 68  SSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLLDP 127
           SSYH+VVRV EI+  +DI+ VQTY+INSA+++FLNERPQP+ GKG  + CEIC RSLLD 
Sbjct: 74  SSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCRSLLDS 133

Query: 128 FRFCSLGCKLVGVKRNGEDASFNVEAK 155
           FRFCSLGCKL G++R     +F+++ K
Sbjct: 134 FRFCSLGCKLGGMRRGDLSLTFSLKGK 159

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g01400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	4.5e-28	44.53	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cp4.1LG03g01400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935045.1	1.88e-131	100.00	uncharacterized protein At3g50808-like [Cucurbita moschata] >XP_023528012.1 unch...	[more]
XP_022983115.1	7.34e-129	97.80	uncharacterized protein At3g50808-like [Cucurbita maxima] >XP_022983117.1 unchar...	[more]
KAG6580644.1	1.19e-124	97.25	hypothetical protein SDJN03_20646, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038903535.1	1.09e-123	96.13	uncharacterized protein LOC120090101 isoform X2 [Benincasa hispida]	[more]
XP_038903534.1	1.12e-123	96.13	uncharacterized protein LOC120090101 isoform X1 [Benincasa hispida]	[more]

BLAST of Cp4.1LG03g01400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9G7	9.08e-132	100.00	uncharacterized protein At3g50808-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1IYD5	3.56e-129	97.80	uncharacterized protein At3g50808-like OS=Cucurbita maxima OX=3661 GN=LOC1114817...	[more]
A0A1S3B782	1.70e-122	96.09	uncharacterized protein LOC103486541 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B5Z6	9.49e-122	96.07	uncharacterized protein LOC103486541 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LDT6	2.72e-121	95.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G746610 PE=4 SV=1	[more]

BLAST of Cp4.1LG03g01400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27930.1	6.2e-57	58.95	PLATZ transcription factor family protein	[more]
AT1G32700.1	3.1e-48	50.00	PLATZ transcription factor family protein	[more]
AT4G17900.1	4.5e-47	49.74	PLATZ transcription factor family protein	[more]
AT1G76590.1	3.8e-46	61.31	PLATZ transcription factor family protein	[more]
AT1G21000.1	1.1e-45	56.46	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 66..137 e-value: 1.2E-28 score: 99.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..182
None	No IPR available	PANTHER	PTHR31065:SF43	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 3..170
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 3..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g01400.1	Cp4.1LG03g01400.1	mRNA