Cp4.1LG03g01170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCCTCCGGCCGCCACCCCATCTACAAAGGCATTCGCCAGCGCACCACCGGCAAATGGGTCTCCGAAATTCGCGAGCCAAGGAAACCCAACCGAATTTGGTTAGGAACCTTCCCAACCGCTGAAATGGCCGCCGTCGCATACGACGTCGCAGCCCTCGCCCTCAAAGGCCAGGACGCCGAGCTCAATTTCCCCAATTCCGCTGCTTCTCTCCCTGTCCCCGCCTCTCGCTCTGCTTCTGATATTCAAGCTGCCGCCGCATCCGCCGCCGCTGCACTTGGCGCAGCGGCAGCCGCCATGGAGGCACGCAATAATAACGGTCGCGGCCGTAGTAACTTCTCTGCAACTAACTCTGCGTACGGAACAAGATACAACGAAAATGAATTGGGAAATCAGTTCGTTGATGAGGATTTAATCTTCGATATGCCTAATGTTCTAATGAACATGGCCGAAGGAATGCTTCTTAGCCCTCCCCGTTTCAATGTCCACGGCAATGACGACCGCGACGACGGCGGTGATCAAACCCTTTGGAACTTTCCCTAAACAACATTAATAATATACTTACAACTATATAACATAAAAACATATATATACATATTATGTATAAAATTATAAACTTTGTATATCCATATATATATATATATATATAAAGGGAGGTGCTGTTATATGGTACCCTTCATATTAGTTTCTTTAATTATACTTCTTGTTCTTCTTCAGCCGCCATGGGAGAACCATTGA ATGTCTTCCTCCGGCCGCCACCCCATCTACAAAGGCATTCGCCAGCGCACCACCGGCAAATGGGTCTCCGAAATTCGCGAGCCAAGGAAACCCAACCGAATTTGGTTAGGAACCTTCCCAACCGCTGAAATGGCCGCCGTCGCATACGACGTCGCAGCCCTCGCCCTCAAAGGCCAGGACGCCGAGCTCAATTTCCCCAATTCCGCTGCTTCTCTCCCTGTCCCCGCCTCTCGCTCTGCTTCTGATATTCAAGCTGCCGCCGCATCCGCCGCCGCTGCACTTGGCGCAGCGGCAGCCGCCATGGAGGCACGCAATAATAACGGTCGCGGCCGTAGTAACTTCTCTGCAACTAACTCTGCGTACGGAACAAGATACAACGAAAATGAATTGGGAAATCAGTTCGTTGATGAGGATTTAATCTTCGATATGCCTAATCCGCCATGGGAGAACCATTGA ATGTCTTCCTCCGGCCGCCACCCCATCTACAAAGGCATTCGCCAGCGCACCACCGGCAAATGGGTCTCCGAAATTCGCGAGCCAAGGAAACCCAACCGAATTTGGTTAGGAACCTTCCCAACCGCTGAAATGGCCGCCGTCGCATACGACGTCGCAGCCCTCGCCCTCAAAGGCCAGGACGCCGAGCTCAATTTCCCCAATTCCGCTGCTTCTCTCCCTGTCCCCGCCTCTCGCTCTGCTTCTGATATTCAAGCTGCCGCCGCATCCGCCGCCGCTGCACTTGGCGCAGCGGCAGCCGCCATGGAGGCACGCAATAATAACGGTCGCGGCCGTAGTAACTTCTCTGCAACTAACTCTGCGTACGGAACAAGATACAACGAAAATGAATTGGGAAATCAGTTCGTTGATGAGGATTTAATCTTCGATATGCCTAATCCGCCATGGGAGAACCATTGA MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSAYGTRYNENELGNQFVDEDLIFDMPNPPWENH Homology
BLAST of Cp4.1LG03g01170 vs. ExPASy Swiss-Prot
Match: Q9SJR0 (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.6e-39 Identity = 94/144 (65.28%), Postives = 109/144 (75.69%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. ExPASy Swiss-Prot
Match: Q38Q39 (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 GN=ERF027 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 3.2e-27 Identity = 75/150 (50.00%), Postives = 102/150 (68.00%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. ExPASy Swiss-Prot
Match: Q9CAN9 (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 GN=ERF026 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 5.1e-25 Identity = 76/160 (47.50%), Postives = 98/160 (61.25%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 8.7e-25 Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.5e-24 Identity = 59/88 (67.05%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. NCBI nr
Match: XP_023529104.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 269 bits (687), Expect = 8.70e-90 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. NCBI nr
Match: XP_022935579.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita moschata]) HSP 1 Score: 261 bits (668), Expect = 6.83e-87 Identity = 141/145 (97.24%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. NCBI nr
Match: KAG6580676.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017430.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 259 bits (662), Expect = 5.61e-86 Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. NCBI nr
Match: XP_022983118.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita maxima]) HSP 1 Score: 258 bits (660), Expect = 1.09e-85 Identity = 139/145 (95.86%), Postives = 143/145 (98.62%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. NCBI nr
Match: XP_038906274.1 (ethylene-responsive transcription factor ERF024 [Benincasa hispida]) HSP 1 Score: 217 bits (553), Expect = 2.29e-69 Identity = 120/147 (81.63%), Postives = 133/147 (90.48%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. ExPASy TrEMBL
Match: A0A6J1F5U1 (ethylene-responsive transcription factor ERF024-like OS=Cucurbita moschata OX=3662 GN=LOC111442412 PE=4 SV=1) HSP 1 Score: 261 bits (668), Expect = 3.31e-87 Identity = 141/145 (97.24%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. ExPASy TrEMBL
Match: A0A6J1J6V1 (ethylene-responsive transcription factor ERF024-like OS=Cucurbita maxima OX=3661 GN=LOC111481761 PE=4 SV=1) HSP 1 Score: 258 bits (660), Expect = 5.29e-86 Identity = 139/145 (95.86%), Postives = 143/145 (98.62%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. ExPASy TrEMBL
Match: A0A0A0LBA2 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G751430 PE=4 SV=1) HSP 1 Score: 213 bits (542), Expect = 5.41e-68 Identity = 120/145 (82.76%), Postives = 129/145 (88.97%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. ExPASy TrEMBL
Match: A0A5A7TQS0 (Ethylene-responsive transcription factor ERF024-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003560 PE=4 SV=1) HSP 1 Score: 207 bits (528), Expect = 7.29e-66 Identity = 117/145 (80.69%), Postives = 128/145 (88.28%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. ExPASy TrEMBL
Match: A0A1S3B634 (ethylene-responsive transcription factor ERF024-like OS=Cucumis melo OX=3656 GN=LOC103486579 PE=4 SV=1) HSP 1 Score: 207 bits (528), Expect = 7.29e-66 Identity = 117/145 (80.69%), Postives = 128/145 (88.28%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. TAIR 10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 163.7 bits (413), Expect = 1.2e-40 Identity = 94/144 (65.28%), Postives = 109/144 (75.69%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. TAIR 10
Match: AT1G12630.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 122.9 bits (307), Expect = 2.3e-28 Identity = 75/150 (50.00%), Postives = 102/150 (68.00%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 114.8 bits (286), Expect = 6.2e-26 Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. TAIR 10
Match: AT2G44940.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 113.2 bits (282), Expect = 1.8e-25 Identity = 58/86 (67.44%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of Cp4.1LG03g01170 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 113.2 bits (282), Expect = 1.8e-25 Identity = 60/91 (65.93%), Postives = 70/91 (76.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|