Cp4.1LG03g01170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG03g01170
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionethylene-responsive transcription factor ERF024-like
LocationCp4.1LG03: 1228923 .. 1229663 (+)
RNA-Seq ExpressionCp4.1LG03g01170
SyntenyCp4.1LG03g01170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCCTCCGGCCGCCACCCCATCTACAAAGGCATTCGCCAGCGCACCACCGGCAAATGGGTCTCCGAAATTCGCGAGCCAAGGAAACCCAACCGAATTTGGTTAGGAACCTTCCCAACCGCTGAAATGGCCGCCGTCGCATACGACGTCGCAGCCCTCGCCCTCAAAGGCCAGGACGCCGAGCTCAATTTCCCCAATTCCGCTGCTTCTCTCCCTGTCCCCGCCTCTCGCTCTGCTTCTGATATTCAAGCTGCCGCCGCATCCGCCGCCGCTGCACTTGGCGCAGCGGCAGCCGCCATGGAGGCACGCAATAATAACGGTCGCGGCCGTAGTAACTTCTCTGCAACTAACTCTGCGTACGGAACAAGATACAACGAAAATGAATTGGGAAATCAGTTCGTTGATGAGGATTTAATCTTCGATATGCCTAATGTTCTAATGAACATGGCCGAAGGAATGCTTCTTAGCCCTCCCCGTTTCAATGTCCACGGCAATGACGACCGCGACGACGGCGGTGATCAAACCCTTTGGAACTTTCCCTAAACAACATTAATAATATACTTACAACTATATAACATAAAAACATATATATACATATTATGTATAAAATTATAAACTTTGTATATCCATATATATATATATATATATAAAGGGAGGTGCTGTTATATGGTACCCTTCATATTAGTTTCTTTAATTATACTTCTTGTTCTTCTTCAGCCGCCATGGGAGAACCATTGA

mRNA sequence

ATGTCTTCCTCCGGCCGCCACCCCATCTACAAAGGCATTCGCCAGCGCACCACCGGCAAATGGGTCTCCGAAATTCGCGAGCCAAGGAAACCCAACCGAATTTGGTTAGGAACCTTCCCAACCGCTGAAATGGCCGCCGTCGCATACGACGTCGCAGCCCTCGCCCTCAAAGGCCAGGACGCCGAGCTCAATTTCCCCAATTCCGCTGCTTCTCTCCCTGTCCCCGCCTCTCGCTCTGCTTCTGATATTCAAGCTGCCGCCGCATCCGCCGCCGCTGCACTTGGCGCAGCGGCAGCCGCCATGGAGGCACGCAATAATAACGGTCGCGGCCGTAGTAACTTCTCTGCAACTAACTCTGCGTACGGAACAAGATACAACGAAAATGAATTGGGAAATCAGTTCGTTGATGAGGATTTAATCTTCGATATGCCTAATCCGCCATGGGAGAACCATTGA

Coding sequence (CDS)

ATGTCTTCCTCCGGCCGCCACCCCATCTACAAAGGCATTCGCCAGCGCACCACCGGCAAATGGGTCTCCGAAATTCGCGAGCCAAGGAAACCCAACCGAATTTGGTTAGGAACCTTCCCAACCGCTGAAATGGCCGCCGTCGCATACGACGTCGCAGCCCTCGCCCTCAAAGGCCAGGACGCCGAGCTCAATTTCCCCAATTCCGCTGCTTCTCTCCCTGTCCCCGCCTCTCGCTCTGCTTCTGATATTCAAGCTGCCGCCGCATCCGCCGCCGCTGCACTTGGCGCAGCGGCAGCCGCCATGGAGGCACGCAATAATAACGGTCGCGGCCGTAGTAACTTCTCTGCAACTAACTCTGCGTACGGAACAAGATACAACGAAAATGAATTGGGAAATCAGTTCGTTGATGAGGATTTAATCTTCGATATGCCTAATCCGCCATGGGAGAACCATTGA

Protein sequence

MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSAYGTRYNENELGNQFVDEDLIFDMPNPPWENH
Homology
[Close]
BLAST of Cp4.1LG03g01170 vs. ExPASy Swiss-Prot
Match: Q9SJR0 (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-39
Identity = 94/144 (65.28%), Postives = 109/144 (75.69%), Query Frame = 0 

Query: 3   SSGRHPIYKGIRQR-TTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62
           + GRHP+Y+G+RQR  + KWVSEIREPRKPNRIWLGTF T EMAA+AYDVAALALKG  A
Sbjct: 8   NGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQA 67

Query: 63  ELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSAY 122
           ELNFPNS +SLP P S S +DIQAAAASAAAA GAA  A+   NNN +  S  +  NS+Y
Sbjct: 68  ELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQ-TSGVACMNSSY 127

Query: 123 GTRYNENELGNQFVDEDLIFDMPN 146
                +N   N F+DEDL+FDMPN
Sbjct: 128 -----DNTNMNGFMDEDLVFDMPN 145

[Close]
BLAST of Cp4.1LG03g01170 vs. ExPASy Swiss-Prot
Match: Q38Q39 (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 GN=ERF027 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.2e-27
Identity = 75/150 (50.00%), Postives = 102/150 (68.00%), Query Frame = 0 

Query: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           + S  + P+Y+GIR R +GKWVSEIREPRK  RIWLGT+P AEMAA AYDVAA+ALKG++
Sbjct: 10  LGSRRKDPVYRGIRCR-SGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGRE 69

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAA-----AMEARNNNGRGRSNFS 120
           A LNFP S  S PVP S SA+DI+AAAA+AAA  G         A E ++++ + R+   
Sbjct: 70  AVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRAREC 129

Query: 121 ATNSAYGTRYNENELGNQFVDEDLIFDMPN 146
             ++  G   + +  G +F+DE+ + +MPN
Sbjct: 130 HVDNDVG---SSSWCGTEFMDEEEVLNMPN 155

[Close]
BLAST of Cp4.1LG03g01170 vs. ExPASy Swiss-Prot
Match: Q9CAN9 (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 GN=ERF026 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.1e-25
Identity = 76/160 (47.50%), Postives = 98/160 (61.25%), Query Frame = 0 

Query: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           +S   ++P+Y+GIR R +GKWVSEIREP+K  R+WLGT+PT EMAA AYDVAALALKG D
Sbjct: 81  ISRRKKNPVYRGIRCR-SGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGD 140

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSA 120
             LNFP+S  S P+P S SA+ I+ AAA+AAA  GAA AA++        +   +A +S 
Sbjct: 141 TLLNFPDSLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVKV-GQKKEDKVYDTAESST 200

Query: 121 YGTRYNENELGNQFVDEDLIFDMPN------------PPW 149
            G           FVDE+ + +MP             PPW
Sbjct: 201 MG-----------FVDEEELLNMPGLLADMAKGMMVAPPW 227

[Close]
BLAST of Cp4.1LG03g01170 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.7e-25
Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 0 

Query: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           +  SG+HP+Y+G+R+R  GKWVSEIREPRK +RIWLGTFP+ EMAA A+DVAAL++KG  
Sbjct: 27  VKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGAS 86

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAA 92
           A LNFP+ A S P P+S S  DIQ AA  AA
Sbjct: 87  AILNFPDLAGSFPRPSSLSPRDIQVAALKAA 117

[Close]
BLAST of Cp4.1LG03g01170 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.5e-24
Identity = 59/88 (67.05%), Postives = 67/88 (76.14%), Query Frame = 0 

Query: 4   SGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAEL 63
           SG+HP+Y+G+R R  GKWVSEIREPRK +RIWLGTFPT EMAA A+DVAAL++KG  A L
Sbjct: 45  SGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAIL 104

Query: 64  NFPNSAASLPVPASRSASDIQAAAASAA 92
           NFP  A S P P S S  DIQ AA  AA
Sbjct: 105 NFPELADSFPRPVSLSPRDIQTAALKAA 132

[Close]
BLAST of Cp4.1LG03g01170 vs. NCBI nr
Match: XP_023529104.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269 bits (687), Expect = 8.70e-90
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 

Query: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD
Sbjct: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSA 120
           AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSA
Sbjct: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSA 120

Query: 121 YGTRYNENELGNQFVDEDLIFDMPN 145
           YGTRYNENELGNQFVDEDLIFDMPN
Sbjct: 121 YGTRYNENELGNQFVDEDLIFDMPN 145

[Close]
BLAST of Cp4.1LG03g01170 vs. NCBI nr
Match: XP_022935579.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita moschata])

HSP 1 Score: 261 bits (668), Expect = 6.83e-87
Identity = 141/145 (97.24%), Postives = 142/145 (97.93%), Query Frame = 0 

Query: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           MSSS RHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD
Sbjct: 1   MSSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSA 120
           AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGR RSNFS TNS+
Sbjct: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSS 120

Query: 121 YGTRYNENELGNQFVDEDLIFDMPN 145
           YGTRYNENELGNQFVDEDLIFDMPN
Sbjct: 121 YGTRYNENELGNQFVDEDLIFDMPN 145

[Close]
BLAST of Cp4.1LG03g01170 vs. NCBI nr
Match: KAG6580676.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017430.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 259 bits (662), Expect = 5.61e-86
Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = 0 

Query: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           MSSS RHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD
Sbjct: 1   MSSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSA 120
           AELNFPNSAASLPVPASRSASDIQAAA SAAAALGAAAAAMEARNNNGRGRSNFS TNS+
Sbjct: 61  AELNFPNSAASLPVPASRSASDIQAAATSAAAALGAAAAAMEARNNNGRGRSNFSGTNSS 120

Query: 121 YGTRYNENELGNQFVDEDLIFDMPN 145
           YGTRYNENEL NQFVDEDLIFDMPN
Sbjct: 121 YGTRYNENELENQFVDEDLIFDMPN 145

[Close]
BLAST of Cp4.1LG03g01170 vs. NCBI nr
Match: XP_022983118.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita maxima])

HSP 1 Score: 258 bits (660), Expect = 1.09e-85
Identity = 139/145 (95.86%), Postives = 143/145 (98.62%), Query Frame = 0 

Query: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD
Sbjct: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSA 120
           AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAA+EARNNNGR RSNFS TNS+
Sbjct: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAIEARNNNGRRRSNFSGTNSS 120

Query: 121 YGTRYNENELGNQFVDEDLIFDMPN 145
           YGTRY+ENELGN+FVDEDLIFDMPN
Sbjct: 121 YGTRYDENELGNEFVDEDLIFDMPN 145

[Close]
BLAST of Cp4.1LG03g01170 vs. NCBI nr
Match: XP_038906274.1 (ethylene-responsive transcription factor ERF024 [Benincasa hispida])

HSP 1 Score: 217 bits (553), Expect = 2.29e-69
Identity = 120/147 (81.63%), Postives = 133/147 (90.48%), Query Frame = 0 

Query: 2   SSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 61
           SSSGRHP+Y+G+R+R TGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62

Query: 62  ELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSA- 121
           ELNFPNSA+SLPVPASRS SDIQAAAASAAAALGAAAAA+EARNN+G    ++  TNS+ 
Sbjct: 63  ELNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARNNSG----SYRGTNSSD 122

Query: 122 --YGTRYNENELGNQFVDEDLIFDMPN 145
             YG RY ++ LGNQF+DEDLIFDMPN
Sbjct: 123 IVYGGRYGQDGLGNQFMDEDLIFDMPN 145

[Close]
BLAST of Cp4.1LG03g01170 vs. ExPASy TrEMBL
Match: A0A6J1F5U1 (ethylene-responsive transcription factor ERF024-like OS=Cucurbita moschata OX=3662 GN=LOC111442412 PE=4 SV=1)

HSP 1 Score: 261 bits (668), Expect = 3.31e-87
Identity = 141/145 (97.24%), Postives = 142/145 (97.93%), Query Frame = 0 

Query: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           MSSS RHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD
Sbjct: 1   MSSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSA 120
           AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGR RSNFS TNS+
Sbjct: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSS 120

Query: 121 YGTRYNENELGNQFVDEDLIFDMPN 145
           YGTRYNENELGNQFVDEDLIFDMPN
Sbjct: 121 YGTRYNENELGNQFVDEDLIFDMPN 145

[Close]
BLAST of Cp4.1LG03g01170 vs. ExPASy TrEMBL
Match: A0A6J1J6V1 (ethylene-responsive transcription factor ERF024-like OS=Cucurbita maxima OX=3661 GN=LOC111481761 PE=4 SV=1)

HSP 1 Score: 258 bits (660), Expect = 5.29e-86
Identity = 139/145 (95.86%), Postives = 143/145 (98.62%), Query Frame = 0 

Query: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD
Sbjct: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSA 120
           AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAA+EARNNNGR RSNFS TNS+
Sbjct: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAIEARNNNGRRRSNFSGTNSS 120

Query: 121 YGTRYNENELGNQFVDEDLIFDMPN 145
           YGTRY+ENELGN+FVDEDLIFDMPN
Sbjct: 121 YGTRYDENELGNEFVDEDLIFDMPN 145

[Close]
BLAST of Cp4.1LG03g01170 vs. ExPASy TrEMBL
Match: A0A0A0LBA2 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G751430 PE=4 SV=1)

HSP 1 Score: 213 bits (542), Expect = 5.41e-68
Identity = 120/145 (82.76%), Postives = 129/145 (88.97%), Query Frame = 0 

Query: 2   SSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 61
           SSSGRHP+Y+G+R+R TGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62

Query: 62  ELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSAY 121
           ELNFPNSA+SLP+PASRS SDIQAAAASAAAALGAAAAAMEARNN    R + S  +  Y
Sbjct: 63  ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNISSRRGSHSE-DVMY 122

Query: 122 GTRYN-ENELGNQFVDEDLIFDMPN 145
           G RY  E ELGNQF+DEDLIFDMPN
Sbjct: 123 GARYGQEYELGNQFMDEDLIFDMPN 146

[Close]
BLAST of Cp4.1LG03g01170 vs. ExPASy TrEMBL
Match: A0A5A7TQS0 (Ethylene-responsive transcription factor ERF024-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003560 PE=4 SV=1)

HSP 1 Score: 207 bits (528), Expect = 7.29e-66
Identity = 117/145 (80.69%), Postives = 128/145 (88.28%), Query Frame = 0 

Query: 2   SSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 61
           SSSGRHP+Y+G+R+R TGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDT 62

Query: 62  ELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSAY 121
           ELNFPNSA+SLP+PASRS SDIQAAAASAAAALGAAAAAMEARNN+G  R + S  +  Y
Sbjct: 63  ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNSGSRRGSHS-DDVVY 122

Query: 122 GTRYN-ENELGNQFVDEDLIFDMPN 145
             RY  E EL +QF+DEDLIFDMPN
Sbjct: 123 EARYGQEYELESQFMDEDLIFDMPN 146

[Close]
BLAST of Cp4.1LG03g01170 vs. ExPASy TrEMBL
Match: A0A1S3B634 (ethylene-responsive transcription factor ERF024-like OS=Cucumis melo OX=3656 GN=LOC103486579 PE=4 SV=1)

HSP 1 Score: 207 bits (528), Expect = 7.29e-66
Identity = 117/145 (80.69%), Postives = 128/145 (88.28%), Query Frame = 0 

Query: 2   SSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 61
           SSSGRHP+Y+G+R+R TGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDT 62

Query: 62  ELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSAY 121
           ELNFPNSA+SLP+PASRS SDIQAAAASAAAALGAAAAAMEARNN+G  R + S  +  Y
Sbjct: 63  ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNSGSRRGSHS-DDVVY 122

Query: 122 GTRYN-ENELGNQFVDEDLIFDMPN 145
             RY  E EL +QF+DEDLIFDMPN
Sbjct: 123 EARYGQEYELESQFMDEDLIFDMPN 146

[Close]
BLAST of Cp4.1LG03g01170 vs. TAIR 10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-40
Identity = 94/144 (65.28%), Postives = 109/144 (75.69%), Query Frame = 0 

Query: 3   SSGRHPIYKGIRQR-TTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62
           + GRHP+Y+G+RQR  + KWVSEIREPRKPNRIWLGTF T EMAA+AYDVAALALKG  A
Sbjct: 8   NGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQA 67

Query: 63  ELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSAY 122
           ELNFPNS +SLP P S S +DIQAAAASAAAA GAA  A+   NNN +  S  +  NS+Y
Sbjct: 68  ELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQ-TSGVACMNSSY 127

Query: 123 GTRYNENELGNQFVDEDLIFDMPN 146
                +N   N F+DEDL+FDMPN
Sbjct: 128 -----DNTNMNGFMDEDLVFDMPN 145

[Close]
BLAST of Cp4.1LG03g01170 vs. TAIR 10
Match: AT1G12630.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 2.3e-28
Identity = 75/150 (50.00%), Postives = 102/150 (68.00%), Query Frame = 0 

Query: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           + S  + P+Y+GIR R +GKWVSEIREPRK  RIWLGT+P AEMAA AYDVAA+ALKG++
Sbjct: 10  LGSRRKDPVYRGIRCR-SGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGRE 69

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAA-----AMEARNNNGRGRSNFS 120
           A LNFP S  S PVP S SA+DI+AAAA+AAA  G         A E ++++ + R+   
Sbjct: 70  AVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRAREC 129

Query: 121 ATNSAYGTRYNENELGNQFVDEDLIFDMPN 146
             ++  G   + +  G +F+DE+ + +MPN
Sbjct: 130 HVDNDVG---SSSWCGTEFMDEEEVLNMPN 155

[Close]
BLAST of Cp4.1LG03g01170 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 6.2e-26
Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 0 

Query: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           +  SG+HP+Y+G+R+R  GKWVSEIREPRK +RIWLGTFP+ EMAA A+DVAAL++KG  
Sbjct: 27  VKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGAS 86

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAA 92
           A LNFP+ A S P P+S S  DIQ AA  AA
Sbjct: 87  AILNFPDLAGSFPRPSSLSPRDIQVAALKAA 117

[Close]
BLAST of Cp4.1LG03g01170 vs. TAIR 10
Match: AT2G44940.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-25
Identity = 58/86 (67.44%), Postives = 68/86 (79.07%), Query Frame = 0 

Query: 6   RHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAELNF 65
           +HP Y+G+R R+ GKWVSEIREPRK +RIWLGT+PTAEMAA A+DVAALA+KG  A LNF
Sbjct: 96  KHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNF 155

Query: 66  PNSAASLPVPASRSASDIQAAAASAA 92
           P  A  LP P + S  DIQAAA+ AA
Sbjct: 156 PKLAGELPRPVTNSPKDIQAAASLAA 181

[Close]
BLAST of Cp4.1LG03g01170 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-25
Identity = 60/91 (65.93%), Postives = 70/91 (76.92%), Query Frame = 0 

Query: 2   SSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 61
           SSS +HP+Y+G+R R+ GKWVSEIR+PRK  RIWLGTF TA+MAA A+DVAAL +KG  A
Sbjct: 53  SSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSA 112

Query: 62  ELNFPNSAASLPVPASRSASDIQAAAASAAA 93
            LNFP  A+  P PAS S  DIQ AAA AAA
Sbjct: 113 VLNFPELASLFPRPASSSPHDIQTAAAEAAA 143

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g01170 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SJR01.6e-3965.28Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 ... [more]
Q38Q393.2e-2750.00Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9CAN95.1e-2547.50Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 ... [more]
Q391278.7e-2563.74Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN... [more]
Q9LYD32.5e-2467.05Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702... [more]
BLAST of Cp4.1LG03g01170 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023529104.18.70e-90100.00ethylene-responsive transcription factor ERF024-like [Cucurbita pepo subsp. pepo... [more]
XP_022935579.16.83e-8797.24ethylene-responsive transcription factor ERF024-like [Cucurbita moschata][more]
KAG6580676.15.61e-8696.55Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
XP_022983118.11.09e-8595.86ethylene-responsive transcription factor ERF024-like [Cucurbita maxima][more]
XP_038906274.12.29e-6981.63ethylene-responsive transcription factor ERF024 [Benincasa hispida][more]
BLAST of Cp4.1LG03g01170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F5U13.31e-8797.24ethylene-responsive transcription factor ERF024-like OS=Cucurbita moschata OX=36... [more]
A0A6J1J6V15.29e-8695.86ethylene-responsive transcription factor ERF024-like OS=Cucurbita maxima OX=3661... [more]
A0A0A0LBA25.41e-6882.76AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G751430 PE=... [more]
A0A5A7TQS07.29e-6680.69Ethylene-responsive transcription factor ERF024-like protein OS=Cucumis melo var... [more]
A0A1S3B6347.29e-6680.69ethylene-responsive transcription factor ERF024-like OS=Cucumis melo OX=3656 GN=... [more]
BLAST of Cp4.1LG03g01170 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G36450.11.2e-4065.28Integrase-type DNA-binding superfamily protein [more]
AT1G12630.12.3e-2850.00Integrase-type DNA-binding superfamily protein [more]
AT5G25810.16.2e-2663.74Integrase-type DNA-binding superfamily protein [more]
AT2G44940.11.8e-2567.44Integrase-type DNA-binding superfamily protein [more]
AT3G16280.11.8e-2565.93Integrase-type DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 32..48
score: 66.42
coord: 10..21
score: 51.67
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 9..72
e-value: 1.6E-33
score: 127.4
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 8..58
e-value: 1.4E-11
score: 44.5
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 9..66
score: 22.207401
IPR001471AP2/ERF domainCDDcd00018AP2coord: 8..68
e-value: 1.14769E-29
score: 100.809
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 9..68
e-value: 1.3E-23
score: 84.9
NoneNo IPR availablePANTHERPTHR31985:SF121ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024coord: 3..145
NoneNo IPR availablePANTHERPTHR31985ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATEDcoord: 3..145
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 9..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g01170.1Cp4.1LG03g01170.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity