Cp4.1LG02g15550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATATGTGTTCACCATCACAAAGAGACTATTGAAGAATGGAAGTAGTTGGTCCATGTCAACGTTGACCATTGCTAAGGGAAGAACGAAAGGAAGAAGAGAAAAATCGTGGCTGCTCCGTCTCTCTTCTTCCCTCTGCTTTCGTCCATGTCAAAAGCATTTTCGCTTCTTCTTTTCAACTCTTCGCTAAACCCTATTTTCCCTTGATTTTCCTTCTCTCCAAACACAATCCTTCCTCCATTTCCCTTTGTGTTCTTCTCAACTGCAAACTTATAAATCCCCTCGCAATCGCATCAATCGATCGATCGCTCGGTGTTCGAGTTTAACCTCTTTTTACGTTTTTTGTTTTTGAGGGTTGGATTAGATTTTGATTCTTTCGGTTGAGATATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTTTTCAAGGTCGTGTTGATCGGAGATTCTGCGGTGGGGAAATCGCAACTTCTCTCCCGTTTTACTAGGAATGAGTTCAGTTTGGATTCGAAGGCGACTATCGGGGTTGAGTTTCAGACGAAGACGCTTGTTATTGACCAGAAGGCTATCAAGGCGCAGATATGGGATACTGCTGGTCAGGAGAGGTACTCAAACAAACTTCCATGTTTTTCTTAAGGATTTCTTTCCTGTTTCAACGATTCTCAATTAGGCTTTTGAATATGAACAGTTTTGCTATAAATTATACTAGTTATTCCAGAATTTCTATGTTTAAGATTGATATCAGCATGATAGTTGTTCTTTAGTGGTAATGAAGATTTATTTCGATGATCTGTTAGTTACACATCTTTCTTTAATGGTAATTGTGGGTTTTGCTAAATTTCATTTCAGATGATTACAATGCCCCTAAATTTAGTGATCTTTTTTTTCATGTGAAAATTTTCATATTATTATGTTTATGTTTATGTTTATGTTTATGTATGTATTGAACTTTACTTCATCTCGTGGAGTATTTGTTTTGAATAAAGAAACTGCACCAAGCCCTCAAGGGCGGGGCCTCGTTGGCTAAGGCTTGCGCTCTTTGAGGAACATCTACCCAAATGTGGCATGTTCAATTCTTCCAGTAAGCTTAATAAGGAAAACTCTTGATTTGTCCAAAGTTTAAAAGAGGGTGTGGACATTTTTTTTAGCATAATGAAACTGCTCTGATATATATATTAAGTTTTTGATATGTGAGATCCCACCTCAGTTGGGGAGAGGAATGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAACTGTTACGTAACGGGTCAAAGCGGACAACATCTGCCAGCGGTGGGCTTTGACTGTTACATAATATGGCATTTTGTACAACCTTTTTTGATGTACTATGTAAGAAATCGAATTAATGATGCCTTTTTAACTATGGTAACAATCTGTTAGTAACATCCTGTTTTATCTCTTGCTATGAAGGATATAATCACTTAGTTAAGTGTCTTTATCTCACCATGTTCAATCCCTTGGGGAGAGTTCATGTTGTTGATGTTTGACTTTGATATGTTACTTGCCATAGCTGTACATACAGATATTAAACCTGATCAGTATATTGTGAATTGAATTGAAGAATTGTTCCTGGGACTAGATAAATATGAGTTTTGAATGAGGTCTGGCCATGGTCTTGTATTGTGATTAATGATTACAGTTTGACAAATTACCCATCTCACATAATGTTCAAAACCCGTTAAAAGGGCCTGAATGCCGATGGTTGACATCAAGCTATCGACTTTAGAAAGTGGAAAAACTTTTAGCACGAATAGATGTTAAGAACAATCAAGCTGTGATATTGTCTTGAAACGTGATATCCCAAGCATGTTAAATTCAGATGGAAGAACAAAGCATTTCTTATAAGGGTATAGAAACTTCTCCCTAACAAACGCTTTTTAAAACCTTGAGAGGAAGCCCAAAGAGGACAATATCTATTAGCGGTAGGCTTGGGCTGTTACAGATTTATAATTTTGTCATAAAGTTATATCGGGACATATGGTAAAATTTTATTCTCTGGTTGCTCTGATTATGTAGAAACAGCTCCATAAAAAGCTGTAGATTTTCTTTATTCTTCTCTTAACAGGGATGATTTTCAGGTATCGTGCAGTGACAAGTGCATATTACAGAGGTGCTGTGGGGGCAATGCTGGTCTACGACATGACGAAGCGTCAAACGTTCGATCATATAGCTAGATGGTTGGAAGAATTGCGTGCCCATGCAGACAAGAATATCGTTATAATGCTTATAGGGAACAAGTCCGATCTAGGCTCTCTTCGCGTTGTGCCTACAGAAGACGCAAAAGAGTTTTCTCAAATGGAGAATCTGTTTTTCATGGAAACATCCGCGCTCGAGGCAACTAATGTAGAGGCAGCATTCAATACTATCCTAACAGAAATTTACCGAGTTATCAGCAGGAAGGCGCTGATCGCAAACGAAGAAACTGATTCGGGAGGAAGCTCATCACTCCTCAAAGGAACAAAGATTGTTGTCCCTGGACAAGAGCCTCAGTCTGCAACTTCTGGCTGTTGCAGGAGTTAACAGAGTAGTATTCTTGTTTGACTTCACCATATTCTCACATGAATTGCTTCTTTTTACAGCCTACACAAACACAATACCGCTGGTCTCCAAAAGAGTACAAGACTATTGTATTTCATACTTTTGATGATACAAGGTAAAATAGTACTGATGTTCTAAGCTTTCTGTTTAGAGGCTCTGTCACCAACATAATGTACATTTTGATCGAGCAAAAGCTTAATGTTGTCGTTCTTGTATTCTGATTCTTGTTTCAGTCATTCACGTTTATTGTTTTCTAAAATTATAATGGACCAAATTATTGGAGGCACATAATAATGTAGACATAGTTGTTGATCTAATGGATTGGTTGAATGAAAGTGGATACTACACTACAAGAACTTGAAGAACACATTATTAAAAAGTTCGAGATGGAATATAATTCAACTCTCGGAGCTTCCGTTCACAATTCCTCACCACTAAGCAACAAAAGGTGTGGAATGAGAAACAGGAACACAGATAAAAGCATGAGCCATTGGCAGACTAATTCCAGTTCCGATCTCCATGTTCACCTTCTCTCCATTTCCATCTTTCCCAACCTTCCAATCAAAGCACTGAACCAACGCCGCCACCGTCCTGTTGATCGTGTTGTACGCCAACAACGACCCGGGACAGCCCCTTCTTCCTCCCCCGAACGGCACAAAGCTGAAATTCTGTCCCTTAATCTCGTATTGAATGTGCTTCATTCCTTGATCGCCTTCGTCTTTATTTGGATTTGCATTGTAGAATCTCTCGGGCCGAAATTCGTCGGGATTCTCCCAAAGATTTGGATCGCGCATTATCGCAAACAGGTCGACTGCAACCATGATGTCCTTTGGAATGTCGTATCCGTTCACCTTGCAAGTCTCCCGGCAGGCTCTTCTTGCCACCGGCACCGCCGGAT TATATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATATGTGTTCACCATCACAAAGAGACTATTGAAGAATGGAAGTAGTTGGTCCATGTCAACGTTGACCATTGCTAAGGGAAGAACGAAAGGAAGAAGAGAAAAATCGTGGCTGCTCCGTCTCTCTTCTTCCCTCTGCTTTCGTCCATGTCAAAAGCATTTTCGCTTCTTCTTTTCAACTCTTCGCTAAACCCTATTTTCCCTTGATTTTCCTTCTCTCCAAACACAATCCTTCCTCCATTTCCCTTTGTGTTCTTCTCAACTGCAAACTTATAAATCCCCTCGCAATCGCATCAATCGATCGATCGCTCGGTGTTCGAGTTTAACCTCTTTTTACGTTTTTTGTTTTTGAGGGTTGGATTAGATTTTGATTCTTTCGGTTGAGATATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTTTTCAAGGTCGTGTTGATCGGAGATTCTGCGGTGGGGAAATCGCAACTTCTCTCCCGTTTTACTAGGAATGAGTTCAGTTTGGATTCGAAGGCGACTATCGGGGTTGAGTTTCAGACGAAGACGCTTGTTATTGACCAGAAGGCTATCAAGGCGCAGATATGGGATACTGCTGGTCAGGAGAGGTATCGTGCAGTGACAAGTGCATATTACAGAGGTGCTGTGGGGGCAATGCTGGTCTACGACATGACGAAGCGTCAAACGTTCGATCATATAGCTAGATGGTTGGAAGAATTGCGTGCCCATGCAGACAAGAATATCGTTATAATGCTTATAGGGAACAAGTCCGATCTAGGCTCTCTTCGCGTTGTGCCTACAGAAGACGCAAAAGAGTTTTCTCAAATGGAGAATCTGTTTTTCATGGAAACATCCGCGCTCGAGGCAACTAATGTAGAGGCAGCATTCAATACTATCCTAACAGAAATTTACCGAGTTATCAGCAGGAAGGCGCTGATCGCAAACGAAGAAACTGATTCGGGAGGAAGCTCATCACTCCTCAAAGGAACAAAGATTGTTGTCCCTGGACAAGAGCCTCAGTCTGCAACTTCTGGCTGTTGCAGGAGTTAACAGAGTAGTATTCTTGTTTGACTTCACCATATTCTCACATGAATTGCTTCTTTTTACAGCCTACACAAACACAATACCGCTGGTCTCCAAAAGAGTACAAGACTATTGTATTTCATACTTTTGATGATACAAGGTAAAATAGTACTGATGTTCTAAGCTTTCTGTTTAGAGGCTCTGTCACCAACATAATGTACATTTTGATCGAGCAAAAGCTTAATGTTGTCGTTCTTGTATTCTGATTCTTGTTTCAGTCATTCACGTTTATTGTTTTCTAAAATTATAATGGACCAAATTATTGGAGGCACATAATAATGTAGACATAGTTGTTGATCTAATGGATTGGTTGAATGAAAGTGGATACTACACTACAAGAACTTGAAGAACACATTATTAAAAAGTTCGAGATGGAATATAATTCAACTCTCGGAGCTTCCGTTCACAATTCCTCACCACTAAGCAACAAAAGGTGTGGAATGAGAAACAGGAACACAGATAAAAGCATGAGCCATTGGCAGACTAATTCCAGTTCCGATCTCCATGTTCACCTTCTCTCCATTTCCATCTTTCCCAACCTTCCAATCAAAGCACTGAACCAACGCCGCCACCGTCCTGTTGATCGTGTTGTACGCCAACAACGACCCGGGACAGCCCCTTCTTCCTCCCCCGAACGGCACAAAGCTGAAATTCTGTCCCTTAATCTCGTATTGAATGTGCTTCATTCCTTGATCGCCTTCGTCTTTATTTGGATTTGCATTGTAGAATCTCTCGGGCCGAAATTCGTCGGGATTCTCCCAAAGATTTGGATCGCGCATTATCGCAAACAGGTCGACTGCAACCATGATGTCCTTTGGAATGTCGTATCCGTTCACCTTGCAAGTCTCCCGGCAGGCTCTTCTTGCCACCGGCACCGCCGGAT ATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTTTTCAAGGTCGTGTTGATCGGAGATTCTGCGGTGGGGAAATCGCAACTTCTCTCCCGTTTTACTAGGAATGAGTTCAGTTTGGATTCGAAGGCGACTATCGGGGTTGAGTTTCAGACGAAGACGCTTGTTATTGACCAGAAGGCTATCAAGGCGCAGATATGGGATACTGCTGGTCAGGAGAGGTATCGTGCAGTGACAAGTGCATATTACAGAGGTGCTGTGGGGGCAATGCTGGTCTACGACATGACGAAGCGTCAAACGTTCGATCATATAGCTAGATGGTTGGAAGAATTGCGTGCCCATGCAGACAAGAATATCGTTATAATGCTTATAGGGAACAAGTCCGATCTAGGCTCTCTTCGCGTTGTGCCTACAGAAGACGCAAAAGAGTTTTCTCAAATGGAGAATCTGTTTTTCATGGAAACATCCGCGCTCGAGGCAACTAATGTAGAGGCAGCATTCAATACTATCCTAACAGAAATTTACCGAGTTATCAGCAGGAAGGCGCTGATCGCAAACGAAGAAACTGATTCGGGAGGAAGCTCATCACTCCTCAAAGGAACAAAGATTGTTGTCCCTGGACAAGAGCCTCAGTCTGCAACTTCTGGCTGTTGCAGGAGTTAA MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS Homology
BLAST of Cp4.1LG02g15550 vs. ExPASy Swiss-Prot
Match: Q9FE79 (Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 1.0e-98 Identity = 178/220 (80.91%), Postives = 202/220 (91.82%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. ExPASy Swiss-Prot
Match: P25766 (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 SV=2) HSP 1 Score: 354.4 bits (908), Expect = 9.5e-97 Identity = 178/214 (83.18%), Postives = 197/214 (92.06%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. ExPASy Swiss-Prot
Match: Q9LH50 (Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 4.7e-96 Identity = 175/220 (79.55%), Postives = 199/220 (90.45%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. ExPASy Swiss-Prot
Match: Q40191 (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 8.4e-85 Identity = 160/216 (74.07%), Postives = 187/216 (86.57%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. ExPASy Swiss-Prot
Match: Q9FJN8 (Ras-related protein RABA4a OS=Arabidopsis thaliana OX=3702 GN=RABA4A PE=1 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 1.0e-82 Identity = 155/217 (71.43%), Postives = 187/217 (86.18%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. NCBI nr
Match: XP_023525670.1 (ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 431 bits (1109), Expect = 3.12e-152 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. NCBI nr
Match: XP_022949337.1 (ras-related protein RABA4c-like [Cucurbita moschata] >KAG6606869.1 Ras-related protein RABA4c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036575.1 Ras-related protein RABA4c [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 429 bits (1103), Expect = 2.56e-151 Identity = 220/222 (99.10%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. NCBI nr
Match: XP_022998498.1 (ras-related protein RABA4c-like [Cucurbita maxima]) HSP 1 Score: 427 bits (1097), Expect = 2.10e-150 Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. NCBI nr
Match: XP_008461787.1 (PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo]) HSP 1 Score: 417 bits (1072), Expect = 1.36e-146 Identity = 212/222 (95.50%), Postives = 219/222 (98.65%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. NCBI nr
Match: XP_004149604.1 (ras-related protein RABA4c isoform X1 [Cucumis sativus] >KGN58606.1 hypothetical protein Csa_002054 [Cucumis sativus]) HSP 1 Score: 416 bits (1069), Expect = 3.91e-146 Identity = 213/222 (95.95%), Postives = 218/222 (98.20%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. ExPASy TrEMBL
Match: A0A6J1GBR1 (ras-related protein RABA4c-like OS=Cucurbita moschata OX=3662 GN=LOC111452722 PE=4 SV=1) HSP 1 Score: 429 bits (1103), Expect = 1.24e-151 Identity = 220/222 (99.10%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. ExPASy TrEMBL
Match: A0A6J1KGX4 (ras-related protein RABA4c-like OS=Cucurbita maxima OX=3661 GN=LOC111493112 PE=4 SV=1) HSP 1 Score: 427 bits (1097), Expect = 1.02e-150 Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. ExPASy TrEMBL
Match: A0A1S3CFD0 (ras-related protein RABA4c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500306 PE=4 SV=1) HSP 1 Score: 417 bits (1072), Expect = 6.60e-147 Identity = 212/222 (95.50%), Postives = 219/222 (98.65%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. ExPASy TrEMBL
Match: A0A0A0LEW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G698470 PE=4 SV=1) HSP 1 Score: 416 bits (1069), Expect = 1.89e-146 Identity = 213/222 (95.95%), Postives = 218/222 (98.20%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. ExPASy TrEMBL
Match: A0A6J1DGV8 (ras-related protein RABA4d-like OS=Momordica charantia OX=3673 GN=LOC111020375 PE=4 SV=1) HSP 1 Score: 402 bits (1034), Expect = 4.09e-141 Identity = 202/222 (90.99%), Postives = 215/222 (96.85%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. TAIR 10
Match: AT5G47960.1 (RAB GTPase homolog A4C ) HSP 1 Score: 360.9 bits (925), Expect = 7.2e-100 Identity = 178/220 (80.91%), Postives = 202/220 (91.82%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. TAIR 10
Match: AT3G12160.1 (RAB GTPase homolog A4D ) HSP 1 Score: 352.1 bits (902), Expect = 3.4e-97 Identity = 175/220 (79.55%), Postives = 199/220 (90.45%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. TAIR 10
Match: AT5G65270.1 (RAB GTPase homolog A4A ) HSP 1 Score: 307.8 bits (787), Expect = 7.3e-84 Identity = 155/217 (71.43%), Postives = 187/217 (86.18%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. TAIR 10
Match: AT4G39990.1 (RAB GTPase homolog A4B ) HSP 1 Score: 306.2 bits (783), Expect = 2.1e-83 Identity = 156/214 (72.90%), Postives = 184/214 (85.98%), Query Frame = 0
BLAST of Cp4.1LG02g15550 vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E ) HSP 1 Score: 268.9 bits (686), Expect = 3.7e-72 Identity = 135/210 (64.29%), Postives = 171/210 (81.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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