Cp4.1LG02g15550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g15550
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Ras-related protein
Location	Cp4.1LG02: 13368630 .. 13372165 (+)
RNA-Seq Expression	Cp4.1LG02g15550
Synteny	Cp4.1LG02g15550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATATGTGTTCACCATCACAAAGAGACTATTGAAGAATGGAAGTAGTTGGTCCATGTCAACGTTGACCATTGCTAAGGGAAGAACGAAAGGAAGAAGAGAAAAATCGTGGCTGCTCCGTCTCTCTTCTTCCCTCTGCTTTCGTCCATGTCAAAAGCATTTTCGCTTCTTCTTTTCAACTCTTCGCTAAACCCTATTTTCCCTTGATTTTCCTTCTCTCCAAACACAATCCTTCCTCCATTTCCCTTTGTGTTCTTCTCAACTGCAAACTTATAAATCCCCTCGCAATCGCATCAATCGATCGATCGCTCGGTGTTCGAGTTTAACCTCTTTTTACGTTTTTTGTTTTTGAGGGTTGGATTAGATTTTGATTCTTTCGGTTGAGATATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTTTTCAAGGTCGTGTTGATCGGAGATTCTGCGGTGGGGAAATCGCAACTTCTCTCCCGTTTTACTAGGAATGAGTTCAGTTTGGATTCGAAGGCGACTATCGGGGTTGAGTTTCAGACGAAGACGCTTGTTATTGACCAGAAGGCTATCAAGGCGCAGATATGGGATACTGCTGGTCAGGAGAGGTACTCAAACAAACTTCCATGTTTTTCTTAAGGATTTCTTTCCTGTTTCAACGATTCTCAATTAGGCTTTTGAATATGAACAGTTTTGCTATAAATTATACTAGTTATTCCAGAATTTCTATGTTTAAGATTGATATCAGCATGATAGTTGTTCTTTAGTGGTAATGAAGATTTATTTCGATGATCTGTTAGTTACACATCTTTCTTTAATGGTAATTGTGGGTTTTGCTAAATTTCATTTCAGATGATTACAATGCCCCTAAATTTAGTGATCTTTTTTTTCATGTGAAAATTTTCATATTATTATGTTTATGTTTATGTTTATGTTTATGTATGTATTGAACTTTACTTCATCTCGTGGAGTATTTGTTTTGAATAAAGAAACTGCACCAAGCCCTCAAGGGCGGGGCCTCGTTGGCTAAGGCTTGCGCTCTTTGAGGAACATCTACCCAAATGTGGCATGTTCAATTCTTCCAGTAAGCTTAATAAGGAAAACTCTTGATTTGTCCAAAGTTTAAAAGAGGGTGTGGACATTTTTTTTAGCATAATGAAACTGCTCTGATATATATATTAAGTTTTTGATATGTGAGATCCCACCTCAGTTGGGGAGAGGAATGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAACTGTTACGTAACGGGTCAAAGCGGACAACATCTGCCAGCGGTGGGCTTTGACTGTTACATAATATGGCATTTTGTACAACCTTTTTTGATGTACTATGTAAGAAATCGAATTAATGATGCCTTTTTAACTATGGTAACAATCTGTTAGTAACATCCTGTTTTATCTCTTGCTATGAAGGATATAATCACTTAGTTAAGTGTCTTTATCTCACCATGTTCAATCCCTTGGGGAGAGTTCATGTTGTTGATGTTTGACTTTGATATGTTACTTGCCATAGCTGTACATACAGATATTAAACCTGATCAGTATATTGTGAATTGAATTGAAGAATTGTTCCTGGGACTAGATAAATATGAGTTTTGAATGAGGTCTGGCCATGGTCTTGTATTGTGATTAATGATTACAGTTTGACAAATTACCCATCTCACATAATGTTCAAAACCCGTTAAAAGGGCCTGAATGCCGATGGTTGACATCAAGCTATCGACTTTAGAAAGTGGAAAAACTTTTAGCACGAATAGATGTTAAGAACAATCAAGCTGTGATATTGTCTTGAAACGTGATATCCCAAGCATGTTAAATTCAGATGGAAGAACAAAGCATTTCTTATAAGGGTATAGAAACTTCTCCCTAACAAACGCTTTTTAAAACCTTGAGAGGAAGCCCAAAGAGGACAATATCTATTAGCGGTAGGCTTGGGCTGTTACAGATTTATAATTTTGTCATAAAGTTATATCGGGACATATGGTAAAATTTTATTCTCTGGTTGCTCTGATTATGTAGAAACAGCTCCATAAAAAGCTGTAGATTTTCTTTATTCTTCTCTTAACAGGGATGATTTTCAGGTATCGTGCAGTGACAAGTGCATATTACAGAGGTGCTGTGGGGGCAATGCTGGTCTACGACATGACGAAGCGTCAAACGTTCGATCATATAGCTAGATGGTTGGAAGAATTGCGTGCCCATGCAGACAAGAATATCGTTATAATGCTTATAGGGAACAAGTCCGATCTAGGCTCTCTTCGCGTTGTGCCTACAGAAGACGCAAAAGAGTTTTCTCAAATGGAGAATCTGTTTTTCATGGAAACATCCGCGCTCGAGGCAACTAATGTAGAGGCAGCATTCAATACTATCCTAACAGAAATTTACCGAGTTATCAGCAGGAAGGCGCTGATCGCAAACGAAGAAACTGATTCGGGAGGAAGCTCATCACTCCTCAAAGGAACAAAGATTGTTGTCCCTGGACAAGAGCCTCAGTCTGCAACTTCTGGCTGTTGCAGGAGTTAACAGAGTAGTATTCTTGTTTGACTTCACCATATTCTCACATGAATTGCTTCTTTTTACAGCCTACACAAACACAATACCGCTGGTCTCCAAAAGAGTACAAGACTATTGTATTTCATACTTTTGATGATACAAGGTAAAATAGTACTGATGTTCTAAGCTTTCTGTTTAGAGGCTCTGTCACCAACATAATGTACATTTTGATCGAGCAAAAGCTTAATGTTGTCGTTCTTGTATTCTGATTCTTGTTTCAGTCATTCACGTTTATTGTTTTCTAAAATTATAATGGACCAAATTATTGGAGGCACATAATAATGTAGACATAGTTGTTGATCTAATGGATTGGTTGAATGAAAGTGGATACTACACTACAAGAACTTGAAGAACACATTATTAAAAAGTTCGAGATGGAATATAATTCAACTCTCGGAGCTTCCGTTCACAATTCCTCACCACTAAGCAACAAAAGGTGTGGAATGAGAAACAGGAACACAGATAAAAGCATGAGCCATTGGCAGACTAATTCCAGTTCCGATCTCCATGTTCACCTTCTCTCCATTTCCATCTTTCCCAACCTTCCAATCAAAGCACTGAACCAACGCCGCCACCGTCCTGTTGATCGTGTTGTACGCCAACAACGACCCGGGACAGCCCCTTCTTCCTCCCCCGAACGGCACAAAGCTGAAATTCTGTCCCTTAATCTCGTATTGAATGTGCTTCATTCCTTGATCGCCTTCGTCTTTATTTGGATTTGCATTGTAGAATCTCTCGGGCCGAAATTCGTCGGGATTCTCCCAAAGATTTGGATCGCGCATTATCGCAAACAGGTCGACTGCAACCATGATGTCCTTTGGAATGTCGTATCCGTTCACCTTGCAAGTCTCCCGGCAGGCTCTTCTTGCCACCGGCACCGCCGGAT

mRNA sequence

TATATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATATGTGTTCACCATCACAAAGAGACTATTGAAGAATGGAAGTAGTTGGTCCATGTCAACGTTGACCATTGCTAAGGGAAGAACGAAAGGAAGAAGAGAAAAATCGTGGCTGCTCCGTCTCTCTTCTTCCCTCTGCTTTCGTCCATGTCAAAAGCATTTTCGCTTCTTCTTTTCAACTCTTCGCTAAACCCTATTTTCCCTTGATTTTCCTTCTCTCCAAACACAATCCTTCCTCCATTTCCCTTTGTGTTCTTCTCAACTGCAAACTTATAAATCCCCTCGCAATCGCATCAATCGATCGATCGCTCGGTGTTCGAGTTTAACCTCTTTTTACGTTTTTTGTTTTTGAGGGTTGGATTAGATTTTGATTCTTTCGGTTGAGATATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTTTTCAAGGTCGTGTTGATCGGAGATTCTGCGGTGGGGAAATCGCAACTTCTCTCCCGTTTTACTAGGAATGAGTTCAGTTTGGATTCGAAGGCGACTATCGGGGTTGAGTTTCAGACGAAGACGCTTGTTATTGACCAGAAGGCTATCAAGGCGCAGATATGGGATACTGCTGGTCAGGAGAGGTATCGTGCAGTGACAAGTGCATATTACAGAGGTGCTGTGGGGGCAATGCTGGTCTACGACATGACGAAGCGTCAAACGTTCGATCATATAGCTAGATGGTTGGAAGAATTGCGTGCCCATGCAGACAAGAATATCGTTATAATGCTTATAGGGAACAAGTCCGATCTAGGCTCTCTTCGCGTTGTGCCTACAGAAGACGCAAAAGAGTTTTCTCAAATGGAGAATCTGTTTTTCATGGAAACATCCGCGCTCGAGGCAACTAATGTAGAGGCAGCATTCAATACTATCCTAACAGAAATTTACCGAGTTATCAGCAGGAAGGCGCTGATCGCAAACGAAGAAACTGATTCGGGAGGAAGCTCATCACTCCTCAAAGGAACAAAGATTGTTGTCCCTGGACAAGAGCCTCAGTCTGCAACTTCTGGCTGTTGCAGGAGTTAACAGAGTAGTATTCTTGTTTGACTTCACCATATTCTCACATGAATTGCTTCTTTTTACAGCCTACACAAACACAATACCGCTGGTCTCCAAAAGAGTACAAGACTATTGTATTTCATACTTTTGATGATACAAGGTAAAATAGTACTGATGTTCTAAGCTTTCTGTTTAGAGGCTCTGTCACCAACATAATGTACATTTTGATCGAGCAAAAGCTTAATGTTGTCGTTCTTGTATTCTGATTCTTGTTTCAGTCATTCACGTTTATTGTTTTCTAAAATTATAATGGACCAAATTATTGGAGGCACATAATAATGTAGACATAGTTGTTGATCTAATGGATTGGTTGAATGAAAGTGGATACTACACTACAAGAACTTGAAGAACACATTATTAAAAAGTTCGAGATGGAATATAATTCAACTCTCGGAGCTTCCGTTCACAATTCCTCACCACTAAGCAACAAAAGGTGTGGAATGAGAAACAGGAACACAGATAAAAGCATGAGCCATTGGCAGACTAATTCCAGTTCCGATCTCCATGTTCACCTTCTCTCCATTTCCATCTTTCCCAACCTTCCAATCAAAGCACTGAACCAACGCCGCCACCGTCCTGTTGATCGTGTTGTACGCCAACAACGACCCGGGACAGCCCCTTCTTCCTCCCCCGAACGGCACAAAGCTGAAATTCTGTCCCTTAATCTCGTATTGAATGTGCTTCATTCCTTGATCGCCTTCGTCTTTATTTGGATTTGCATTGTAGAATCTCTCGGGCCGAAATTCGTCGGGATTCTCCCAAAGATTTGGATCGCGCATTATCGCAAACAGGTCGACTGCAACCATGATGTCCTTTGGAATGTCGTATCCGTTCACCTTGCAAGTCTCCCGGCAGGCTCTTCTTGCCACCGGCACCGCCGGAT

Coding sequence (CDS)

ATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTTTTCAAGGTCGTGTTGATCGGAGATTCTGCGGTGGGGAAATCGCAACTTCTCTCCCGTTTTACTAGGAATGAGTTCAGTTTGGATTCGAAGGCGACTATCGGGGTTGAGTTTCAGACGAAGACGCTTGTTATTGACCAGAAGGCTATCAAGGCGCAGATATGGGATACTGCTGGTCAGGAGAGGTATCGTGCAGTGACAAGTGCATATTACAGAGGTGCTGTGGGGGCAATGCTGGTCTACGACATGACGAAGCGTCAAACGTTCGATCATATAGCTAGATGGTTGGAAGAATTGCGTGCCCATGCAGACAAGAATATCGTTATAATGCTTATAGGGAACAAGTCCGATCTAGGCTCTCTTCGCGTTGTGCCTACAGAAGACGCAAAAGAGTTTTCTCAAATGGAGAATCTGTTTTTCATGGAAACATCCGCGCTCGAGGCAACTAATGTAGAGGCAGCATTCAATACTATCCTAACAGAAATTTACCGAGTTATCAGCAGGAAGGCGCTGATCGCAAACGAAGAAACTGATTCGGGAGGAAGCTCATCACTCCTCAAAGGAACAAAGATTGTTGTCCCTGGACAAGAGCCTCAGTCTGCAACTTCTGGCTGTTGCAGGAGTTAA

Protein sequence

MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS

Homology

[Close]

BLAST of Cp4.1LG02g15550 vs. ExPASy Swiss-Prot
Match: Q9FE79 (Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.0e-98
Identity = 178/220 (80.91%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           +K IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ARWLEELR HADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK+DLG+LR VPTEDAKEF+Q ENLFFMETSAL++ NVE +F T+LTEIYR++
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCC 221
           S+K L+ANEE +SGG SSLL+GTKIVV G+E +S   GCC
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCC 220

[Close]

BLAST of Cp4.1LG02g15550 vs. ExPASy Swiss-Prot
Match: P25766 (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 SV=2)

HSP 1 Score: 354.4 bits (908), Expect = 9.5e-97
Identity = 178/214 (83.18%), Postives = 197/214 (92.06%), Query Frame = 0


Query: 10  QKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIW 69
           QKIDYVFKVVLIGDSAVGKSQLL+RF RNEF+LDSKATIGVEFQT+TL ID + +KAQIW
Sbjct: 13  QKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIW 72

Query: 70  DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIMLIGNK 129
           DTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ARWLEELR HADKNIVIMLIGNK
Sbjct: 73  DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNK 132

Query: 130 SDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANE 189
           SDLG+LRVVPTEDAKEF++ ENLFFMETSALE+TNVE AF T+LTEIYR++S+K L+ANE
Sbjct: 133 SDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANE 192

Query: 190 ETDSGGSSSLLKGTKIVVPGQEPQSAT-SGCCRS 223
           E DS G+SSLLKGTKIVVPGQEP   T + CC S
Sbjct: 193 EVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226

[Close]

BLAST of Cp4.1LG02g15550 vs. ExPASy Swiss-Prot
Match: Q9LH50 (Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.7e-96
Identity = 175/220 (79.55%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RF RNEFS+DSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
            K +KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDH+A+WLEELR HADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK DLGSLR VPTEDA+EF+Q ENLFFMETSALEATNVE AF TILTEIYR+I
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCC 221
           S+K+L A+++ D+ G+SSLLKGT+I++P ++      GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]

BLAST of Cp4.1LG02g15550 vs. ExPASy Swiss-Prot
Match: Q40191 (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 8.4e-85
Identity = 160/216 (74.07%), Postives = 187/216 (86.57%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIKAQI 68
           N KIDYVFKVVLIGDSAVGKSQ+L+RF RNEFSLDSK+TIGVEFQT+TLVID K +KAQI
Sbjct: 11  NAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 70

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIMLIGN 128
           WDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQTFDHI RWLEELR HADKNIVI+LIGN
Sbjct: 71  WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGN 130

Query: 129 KSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIAN 188
           K DL + R VPTEDAKEF++ E LFF+ETSALEATNVE+AF T+LTEIY ++++K+L A+
Sbjct: 131 KCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAAD 190

Query: 189 EETDSGGSSSLLKGTKIVVPG--QEPQSATSGCCRS 223
           E   +G S+S L G KI++PG  QE  +  + CC++
Sbjct: 191 ESQGNGNSAS-LSGQKIIIPGPAQEIPAKRNMCCQA 225

[Close]

BLAST of Cp4.1LG02g15550 vs. ExPASy Swiss-Prot
Match: Q9FJN8 (Ras-related protein RABA4a OS=Arabidopsis thaliana OX=3702 GN=RABA4A PE=1 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.0e-82
Identity = 155/217 (71.43%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIKAQI 68
           +QKIDYVFKVVLIGDSAVGKSQ+L+R+ R+EFSLDSKATIGVEFQT+TLVID K++KAQI
Sbjct: 11  SQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQI 70

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIMLIGN 128
           WDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQTFDHI RWLEELRAHADKNIVI+LIGN
Sbjct: 71  WDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGN 130

Query: 129 KSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIAN 188
           KSDL   R +PTEDAKEF++ E LFF+ETSA  ATNVE+AF+T+LTEI+ ++++K+L A+
Sbjct: 131 KSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAAS 190

Query: 189 EETDSGGSSSLLKGTKIVV---PGQEPQSATSGCCRS 223
           E+ ++G   S L G KI +   PGQ   + ++ CC S
Sbjct: 191 EDQENGNPGS-LAGKKIDIVPGPGQVIPNKSNMCCNS 226

[Close]

BLAST of Cp4.1LG02g15550 vs. NCBI nr
Match: XP_023525670.1 (ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 431 bits (1109), Expect = 3.12e-152
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS 222
           SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS
Sbjct: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS 222

[Close]

BLAST of Cp4.1LG02g15550 vs. NCBI nr
Match: XP_022949337.1 (ras-related protein RABA4c-like [Cucurbita moschata] >KAG6606869.1 Ras-related protein RABA4c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036575.1 Ras-related protein RABA4c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 429 bits (1103), Expect = 2.56e-151
Identity = 220/222 (99.10%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEF+QMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS 222
           SRKALIANEETDSGG+SSLLKGTKIVVPGQEPQSATSGCCRS
Sbjct: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 222

[Close]

BLAST of Cp4.1LG02g15550 vs. NCBI nr
Match: XP_022998498.1 (ras-related protein RABA4c-like [Cucurbita maxima])

HSP 1 Score: 427 bits (1097), Expect = 2.10e-150
Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHI RWLEELRAHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHITRWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEF+QMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS 222
           SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQ ATSGCCRS
Sbjct: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQPATSGCCRS 222

[Close]

BLAST of Cp4.1LG02g15550 vs. NCBI nr
Match: XP_008461787.1 (PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo])

HSP 1 Score: 417 bits (1072), Expect = 1.36e-146
Identity = 212/222 (95.50%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEF+QMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS 222
           S+KAL+AN+ETDSGGSSSLLKGTKIVVPGQEPQ+A+SGCCRS
Sbjct: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of Cp4.1LG02g15550 vs. NCBI nr
Match: XP_004149604.1 (ras-related protein RABA4c isoform X1 [Cucumis sativus] >KGN58606.1 hypothetical protein Csa_002054 [Cucumis sativus])

HSP 1 Score: 416 bits (1069), Expect = 3.91e-146
Identity = 213/222 (95.95%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEF+QMENL FMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS 222
           S+KALIAN+ETDSGGSSSLLKGTKIVVPGQEPQ+A+SGCCRS
Sbjct: 181 SKKALIANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of Cp4.1LG02g15550 vs. ExPASy TrEMBL
Match: A0A6J1GBR1 (ras-related protein RABA4c-like OS=Cucurbita moschata OX=3662 GN=LOC111452722 PE=4 SV=1)

HSP 1 Score: 429 bits (1103), Expect = 1.24e-151
Identity = 220/222 (99.10%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEF+QMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS 222
           SRKALIANEETDSGG+SSLLKGTKIVVPGQEPQSATSGCCRS
Sbjct: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 222

[Close]

BLAST of Cp4.1LG02g15550 vs. ExPASy TrEMBL
Match: A0A6J1KGX4 (ras-related protein RABA4c-like OS=Cucurbita maxima OX=3661 GN=LOC111493112 PE=4 SV=1)

HSP 1 Score: 427 bits (1097), Expect = 1.02e-150
Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHI RWLEELRAHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHITRWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEF+QMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS 222
           SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQ ATSGCCRS
Sbjct: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQPATSGCCRS 222

[Close]

BLAST of Cp4.1LG02g15550 vs. ExPASy TrEMBL
Match: A0A1S3CFD0 (ras-related protein RABA4c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500306 PE=4 SV=1)

HSP 1 Score: 417 bits (1072), Expect = 6.60e-147
Identity = 212/222 (95.50%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEF+QMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS 222
           S+KAL+AN+ETDSGGSSSLLKGTKIVVPGQEPQ+A+SGCCRS
Sbjct: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of Cp4.1LG02g15550 vs. ExPASy TrEMBL
Match: A0A0A0LEW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G698470 PE=4 SV=1)

HSP 1 Score: 416 bits (1069), Expect = 1.89e-146
Identity = 213/222 (95.95%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEF+QMENL FMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS 222
           S+KALIAN+ETDSGGSSSLLKGTKIVVPGQEPQ+A+SGCCRS
Sbjct: 181 SKKALIANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of Cp4.1LG02g15550 vs. ExPASy TrEMBL
Match: A0A6J1DGV8 (ras-related protein RABA4d-like OS=Momordica charantia OX=3673 GN=LOC111020375 PE=4 SV=1)

HSP 1 Score: 402 bits (1034), Expect = 4.09e-141
Identity = 202/222 (90.99%), Postives = 215/222 (96.85%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNL SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           QK IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKRQ+FDHIARWLEELR HADKN
Sbjct: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPT+DA+EF+QMENLFFMETSALEATNVE AFNTILTEIY+VI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVI 180

Query: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS 222
           SRKAL+ANE+ DSGG+SSLLKGTKIVVPGQE  +A+SGCCRS
Sbjct: 181 SRKALVANEDADSGGNSSLLKGTKIVVPGQERSAASSGCCRS 222

[Close]

BLAST of Cp4.1LG02g15550 vs. TAIR 10
Match: AT5G47960.1 (RAB GTPase homolog A4C )

HSP 1 Score: 360.9 bits (925), Expect = 7.2e-100
Identity = 178/220 (80.91%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
           +K IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ARWLEELR HADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK+DLG+LR VPTEDAKEF+Q ENLFFMETSAL++ NVE +F T+LTEIYR++
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCC 221
           S+K L+ANEE +SGG SSLL+GTKIVV G+E +S   GCC
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCC 220

[Close]

BLAST of Cp4.1LG02g15550 vs. TAIR 10
Match: AT3G12160.1 (RAB GTPase homolog A4D )

HSP 1 Score: 352.1 bits (902), Expect = 3.4e-97
Identity = 175/220 (79.55%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60
           MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RF RNEFS+DSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120
            K +KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDH+A+WLEELR HADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK DLGSLR VPTEDA+EF+Q ENLFFMETSALEATNVE AF TILTEIYR+I
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCC 221
           S+K+L A+++ D+ G+SSLLKGT+I++P ++      GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]

BLAST of Cp4.1LG02g15550 vs. TAIR 10
Match: AT5G65270.1 (RAB GTPase homolog A4A )

HSP 1 Score: 307.8 bits (787), Expect = 7.3e-84
Identity = 155/217 (71.43%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIKAQI 68
           +QKIDYVFKVVLIGDSAVGKSQ+L+R+ R+EFSLDSKATIGVEFQT+TLVID K++KAQI
Sbjct: 11  SQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQI 70

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIMLIGN 128
           WDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQTFDHI RWLEELRAHADKNIVI+LIGN
Sbjct: 71  WDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGN 130

Query: 129 KSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIAN 188
           KSDL   R +PTEDAKEF++ E LFF+ETSA  ATNVE+AF+T+LTEI+ ++++K+L A+
Sbjct: 131 KSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAAS 190

Query: 189 EETDSGGSSSLLKGTKIVV---PGQEPQSATSGCCRS 223
           E+ ++G   S L G KI +   PGQ   + ++ CC S
Sbjct: 191 EDQENGNPGS-LAGKKIDIVPGPGQVIPNKSNMCCNS 226

[Close]

BLAST of Cp4.1LG02g15550 vs. TAIR 10
Match: AT4G39990.1 (RAB GTPase homolog A4B )

HSP 1 Score: 306.2 bits (783), Expect = 2.1e-83
Identity = 156/214 (72.90%), Postives = 184/214 (85.98%), Query Frame = 0


Query: 11  KIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWD 70
           K+DYVFKVVLIGDSAVGKSQLL+RF R+EFS+DSKATIGVEFQT+TL I+QK+IKAQIWD
Sbjct: 13  KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72

Query: 71  TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIMLIGNKS 130
           TAGQERYRAVTSAYYRGAVGAMLVYDMTKR+TF+HI RWLEELRAHADKNIVI+LIGNKS
Sbjct: 73  TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132

Query: 131 DLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEE 190
           DL   R VPTEDAKEF++ E LFF+ETSAL ATNVE +FNT++T+IY  +++K L +  +
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGD 192

Query: 191 TDSGGSSSLLKGTKIVVP--GQEPQSATSGCCRS 223
           +++ GS   L G KI++P  GQE  + TS CC S
Sbjct: 193 SNNPGS---LAGKKILIPGSGQEIPAKTSTCCTS 223

[Close]

BLAST of Cp4.1LG02g15550 vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E )

HSP 1 Score: 268.9 bits (686), Expect = 3.7e-72
Identity = 135/210 (64.29%), Postives = 171/210 (81.43%), Query Frame = 0


Query: 13  DYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTA 72
           DY+FK+VLIGDS VGKS LLSRFTRNEFS++SK+TIGVEF T+++ +D+K IKAQ+WDTA
Sbjct: 11  DYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTA 70

Query: 73  GQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKNIVIMLIGNKSDL 132
           GQERYRA+TSAYYRGAVGA+LVYD+T+  TF+++ RWL+ELR H D N+VIML+GNK+DL
Sbjct: 71  GQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADL 130

Query: 133 GSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETD 192
             LR VPTE+A+ FS+ EN+FFMETSAL+ATNVE AF  +LT+IYRV+SRKAL       
Sbjct: 131 RHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKAL-----DG 190

Query: 193 SGGSSSLLKGTKIVVPGQEPQSA--TSGCC 221
           +G   SL KG  I +  ++  +A  +SGCC
Sbjct: 191 TGDPMSLPKGQTIDIGNKDDVTAVKSSGCC 215

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g15550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FE79	1.0e-98	80.91	Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1	[more]
P25766	9.5e-97	83.18	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 S...	[more]
Q9LH50	4.7e-96	79.55	Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1	[more]
Q40191	8.4e-85	74.07	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
Q9FJN8	1.0e-82	71.43	Ras-related protein RABA4a OS=Arabidopsis thaliana OX=3702 GN=RABA4A PE=1 SV=1	[more]

BLAST of Cp4.1LG02g15550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525670.1	3.12e-152	100.00	ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949337.1	2.56e-151	99.10	ras-related protein RABA4c-like [Cucurbita moschata] >KAG6606869.1 Ras-related p...	[more]
XP_022998498.1	2.10e-150	98.65	ras-related protein RABA4c-like [Cucurbita maxima]	[more]
XP_008461787.1	1.36e-146	95.50	PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo]	[more]
XP_004149604.1	3.91e-146	95.95	ras-related protein RABA4c isoform X1 [Cucumis sativus] >KGN58606.1 hypothetical...	[more]

BLAST of Cp4.1LG02g15550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBR1	1.24e-151	99.10	ras-related protein RABA4c-like OS=Cucurbita moschata OX=3662 GN=LOC111452722 PE...	[more]
A0A6J1KGX4	1.02e-150	98.65	ras-related protein RABA4c-like OS=Cucurbita maxima OX=3661 GN=LOC111493112 PE=4...	[more]
A0A1S3CFD0	6.60e-147	95.50	ras-related protein RABA4c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500306 PE...	[more]
A0A0A0LEW7	1.89e-146	95.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G698470 PE=4 SV=1	[more]
A0A6J1DGV8	4.09e-141	90.99	ras-related protein RABA4d-like OS=Momordica charantia OX=3673 GN=LOC111020375 P...	[more]

BLAST of Cp4.1LG02g15550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47960.1	7.2e-100	80.91	RAB GTPase homolog A4C	[more]
AT3G12160.1	3.4e-97	79.55	RAB GTPase homolog A4D	[more]
AT5G65270.1	7.3e-84	71.43	RAB GTPase homolog A4A	[more]
AT4G39990.1	2.1e-83	72.90	RAB GTPase homolog A4B	[more]
AT4G18430.1	3.7e-72	64.29	RAB GTPase homolog A1E	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 39..55 score: 34.83 coord: 119..132 score: 51.17 coord: 16..37 score: 52.86 coord: 57..79 score: 52.46 coord: 154..176 score: 43.38
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..179 e-value: 6.0E-26 score: 102.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..179 e-value: 1.3E-103 score: 360.2
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 e-value: 0.006 score: -1.6
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..215 e-value: 1.5E-5 score: 29.5
None	No IPR available	PANTHER	PTHR47978:SF13	RAS-RELATED PROTEIN RABA4C	coord: 1..221
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 1..221
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..220 score: 34.959034
None	No IPR available	PROSITE	PS51420	RHO	coord: 9..184 score: 8.904835
None	No IPR available	CDD	cd01868	Rab11_like	coord: 13..177 e-value: 6.30523E-125 score: 348.396
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..175 e-value: 2.4E-10 score: 13.4
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..177 e-value: 7.5E-60 score: 201.2
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 10..222 score: 16.02643
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 8..220 e-value: 4.7E-69 score: 233.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..182
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..172 e-value: 2.1E-35 score: 119.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g15550.1	Cp4.1LG02g15550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding