Cp4.1LG01g25420 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g25420
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	UBX domain-containing protein
Location	Cp4.1LG01: 20859724 .. 20863266 (+)
RNA-Seq Expression	Cp4.1LG01g25420
Synteny	Cp4.1LG01g25420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAGCTGGAATTCAAAGGTGTGGTAGGCACGTGTGAAGCAACTTGCGGAAGGGGGTGGCCAGCTAGGAATTCTGATTCCCCTCGAGAGTGCCCGCATCAACCAGCAAGAAACGGGAGCGAAACCTGAAGAAAAAGGGAAGTATTTATATGAGACTCGCCTCTCTTCTTCCTTTCCAAATTAGTGTTCTTTGCTCATGGTTTGGGATGATTCTTACTCTCTAGCACTTAAGAGAAGGCGGTTTACCTACAACCACATCAACTCCATGGCTGACGAATCAGCTAAGGTCTTTTCTCCAATTCTTTCTCTACACCCACAAATTACCTTTCTCAATTCGCTTTCTTGCCTCTTTCTTCTCTCTCTCTCTTCCAGTCGCTTACACTTCGCTCTGATTGTAATAGCCCTATGCTTGATCCAGTGATTTGATATTGTTGATTGGGAATTCTGGGTATTCTTTAGATTTGTATTTTTGTCTTTCTATTCTACTAGCATCGTGTTTTTCTGTTCTTTTCCTTCTTTTTACTCTATGATTGTGGACATACTGGCCTTTCCCCCTTTCTTAAACTGGGTTTCCATTGTTTTTTTAAATGGAGGGTGAGGAGAAGGATCATGCTCGTGGTGCTTAAACGAATTATATTGATAAGATTTTTATGGGTAACCTTCTTGGATTATTTGGTGTACACACTCATTGTCTGGTAATAAGCTATAATTTTGTTCTCATATATGGCGATCTCTGGTGTAAATCTGTAATGGTTCTGCAAACTTGGTCCATTTGAATGATATCTGCTGCTGTTGGTATAGAATGCTCACTATTTTTTATCCCCACCGGGGATTTTTGACGTTAGGCCAAGCTCCTGGGTGCGAAAGAAAAATTTGGGCGAGAGATCCGAGTGTTTGAAACATTGCCACCGTCTTCATCAAGTGATGAATTGCCCAACACTGGTACAAATTAATTTAAGCTTGCATCCTTGGATGGCTCTGGACATAGTTTACAGACAAATGGATTTTAGATCATCCTTGCAAGTATAACTCATTCTATATGTGCCCTTATTCTTTTTAGGAGGAGAGACAGATGACTTTTATGAGTTTACAGCAGAAGACTACTACCGAGTATTAGCAAGCCGAAAGGATGGTAATTTGTGATTATTTTCATTACTTCAGCAGTAGTAATTGAAGCGCACAATTTTCTTTTGGTTCCTAAGATTTGCTGCATACAATGCTTTGATGCTTGTCACTTTTTCCCTTGATATTGCTGGCATTATCATTTAGGAGGAGTATTTTTCGTAGGTAATAGACAATTTGAAACATGTTACTTCAACAATTTCTTAGTTGATCTTTATTCTTATTTCGTTAACTCCAAAAATCCCAACGATTATCTGGGAAGATTGTATGAATGTGAGATCCCACGTCTTGGAAAGGGAAACAAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAACCTTGAGGGGAAAGTCCAAAGAGGATAACATCTATTAGCGGTGGGCTTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACATTGGGCGGTATGTCAACGAAGATGCTGGGTCCCTAAGGGGGGTGGATTGTGAGATCTCACATCGGTTGGAGAGGGGAATGAAACATTTCTTATAAGAGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACCTTGAGGGGAAGTCCTTGAAGGGAAAACCGAAAGAGGATAATATTTACTAGCGGTGGGCTTGGGCTGTTACAATAAATATGGATACTTGACAAGTTGGCATCCTTTAGGAGTTTCATGCATGCGCAACACACATGTATGTATGTATGTATATATGTATGTAGGTGACACATTGTTTCTGCTAACACATATACCTTTATAGAAATAGTAATGCTCTATGTTTCCATCCCGGCAGAGAAATATTTAAAAACACGGAAAATCAGAGAGGCAGAAGAGGCAGCTCGCAAGTCAAGGATAACAAAGGTGCTACCAAGACTTTATAGCTAAACTTCTCCTCGATAACCTGTTGTTTTTTCTTACAGCATTGGTATGCTTAGCAGATTACAACTTCTAACCTGACCATCCTGCTGCAGGTTAGTGTTCGGGTTCGCTTTCCTGACAATCACACATTAGAGGCAACTTTCCATCCATCCGAAACAATGCAGGCCTTGGTTGATCTTCTTACCAAAGTAGTTGCTCAGCCAGAACTACCATTTTATATTTGTATGTCTAAAGAACTCAGATCAATCTGATATTCACCTATTTTCTGTTGTTTCTTTGAAGAGTTCTTAAGAGTTGATTCATCATTACCTAACATTGCAGATACCGCGCCTCCCAAGAAACAGATAAAAGATTTGACACAGGATTTTTATTCTGCTGGCTTTGTTCCTGGTGCAATTGTTTACTTTTCGTACGATCAACCTGAAGGTTTGGAATACAAAATTCACCCTGCTTATTTGAAGTTTTTGTGGCTTGACTAAGTACTGTATGCGCTTTAGTTTTCAAAACTGGATTTACTTATTCATATGGTATTCAACATATTTTGGCTCGACTGTGGTATTCAATATTATATCATCTTGGATTATTGAATTCTAATTCTTAGTCTGTCTATTTCTTGTACTTTTTATAGTTCGTTAGGAATCTTCCCTCTCATTTTACTGGATGTGAGAAAACGGCCAGTGGATGATTCTAAACTTTTAAACGAAAACGTTCTATGTAATTCAGATACCTGTTCCAAATTAAGTTTGAATATGTATTAACTTATTCTTCATTTGTTTCATGTTTTCTATATGCGACATCCTGCTATATAGAGTTTCTTAGATATATACATATGCATATATGCGTTTATAGAGCTTCTTATATGATGGAGATCTAATTTTGATATCCATATCATGCATTTATTTTCTTTTTAGCTTATGATTTCAGACAAGTGTCTTCTTATCTCAACTCTTTATATACGGAAATGATATCATGATGAGGTCAAATGTGCATTTCTGGTTCTAATATCTTTTACTTGAGATTGCTTTGAACTGTGATGCAATGCAACTGGTTCTCAGAATTATTATGTTGAACACAGGCGAGGCAGTTGGTTCAGTGGCTTACCTTAATGAGGAGGCCATGTCTTTGAAAGGTATCGAAATCGCGAGCGAAGAAGACGAGCCTGTATTGGCTGTTGCGGAGCCTGAAACAGCACCCCCTCCCCCTGTTTCTGACCCTGTTGTCAAGGAAACCAAGCCTACTAATAAGAAAGCTGTCAAACCCAAGTGGCTGAAAATGTAAAGACTGCTGCTGCTGCTGCGTGGTGAAAACTGCTCATGAGTAAACTAGATTTTGTGTTCGTTGTGTTTGAACTTGTTAGTACCCTCTTATTTTTATGTTTAATGGTGATCATAGATTCTCTTCAACCTTCATTTTCTTTTTTTTTTTTCTTGGTTCTATGCTTTTATGTTGCAAATGTTTCATATAGACAAACAAATATTTTAAATCTTACGAGATATTTGTGTGGATCAATCTAACGAAGATTTAAGTCGC

mRNA sequence

AGAAGCTGGAATTCAAAGGTGTGGTAGGCACGTGTGAAGCAACTTGCGGAAGGGGGTGGCCAGCTAGGAATTCTGATTCCCCTCGAGAGTGCCCGCATCAACCAGCAAGAAACGGGAGCGAAACCTGAAGAAAAAGGGAAGTATTTATATGAGACTCGCCTCTCTTCTTCCTTTCCAAATTAGTGTTCTTTGCTCATGGTTTGGGATGATTCTTACTCTCTAGCACTTAAGAGAAGGCGGTTTACCTACAACCACATCAACTCCATGGCTGACGAATCAGCTAAGGCCAAGCTCCTGGGTGCGAAAGAAAAATTTGGGCGAGAGATCCGAGTGTTTGAAACATTGCCACCGTCTTCATCAAGTGATGAATTGCCCAACACTGGAGGAGAGACAGATGACTTTTATGAGTTTACAGCAGAAGACTACTACCGAGTATTAGCAAGCCGAAAGGATGAGAAATATTTAAAAACACGGAAAATCAGAGAGGCAGAAGAGGCAGCTCGCAAGTCAAGGATAACAAAGGTTAGTGTTCGGGTTCGCTTTCCTGACAATCACACATTAGAGGCAACTTTCCATCCATCCGAAACAATGCAGGCCTTGGTTGATCTTCTTACCAAAGTAGTTGCTCAGCCAGAACTACCATTTTATATTTATACCGCGCCTCCCAAGAAACAGATAAAAGATTTGACACAGGATTTTTATTCTGCTGGCTTTGTTCCTGGTGCAATTGTTTACTTTTCGTACGATCAACCTGAAGGCGAGGCAGTTGGTTCAGTGGCTTACCTTAATGAGGAGGCCATGTCTTTGAAAGGTATCGAAATCGCGAGCGAAGAAGACGAGCCTGTATTGGCTGTTGCGGAGCCTGAAACAGCACCCCCTCCCCCTGTTTCTGACCCTGTTGTCAAGGAAACCAAGCCTACTAATAAGAAAGCTGTCAAACCCAAGTGGCTGAAAATGTAAAGACTGCTGCTGCTGCTGCGTGGTGAAAACTGCTCATGAGTAAACTAGATTTTGTGTTCGTTGTGTTTGAACTTGTTAGTACCCTCTTATTTTTATGTTTAATGGTGATCATAGATTCTCTTCAACCTTCATTTTCTTTTTTTTTTTTCTTGGTTCTATGCTTTTATGTTGCAAATGTTTCATATAGACAAACAAATATTTTAAATCTTACGAGATATTTGTGTGGATCAATCTAACGAAGATTTAAGTCGC

Coding sequence (CDS)

ATGGTTTGGGATGATTCTTACTCTCTAGCACTTAAGAGAAGGCGGTTTACCTACAACCACATCAACTCCATGGCTGACGAATCAGCTAAGGCCAAGCTCCTGGGTGCGAAAGAAAAATTTGGGCGAGAGATCCGAGTGTTTGAAACATTGCCACCGTCTTCATCAAGTGATGAATTGCCCAACACTGGAGGAGAGACAGATGACTTTTATGAGTTTACAGCAGAAGACTACTACCGAGTATTAGCAAGCCGAAAGGATGAGAAATATTTAAAAACACGGAAAATCAGAGAGGCAGAAGAGGCAGCTCGCAAGTCAAGGATAACAAAGGTTAGTGTTCGGGTTCGCTTTCCTGACAATCACACATTAGAGGCAACTTTCCATCCATCCGAAACAATGCAGGCCTTGGTTGATCTTCTTACCAAAGTAGTTGCTCAGCCAGAACTACCATTTTATATTTATACCGCGCCTCCCAAGAAACAGATAAAAGATTTGACACAGGATTTTTATTCTGCTGGCTTTGTTCCTGGTGCAATTGTTTACTTTTCGTACGATCAACCTGAAGGCGAGGCAGTTGGTTCAGTGGCTTACCTTAATGAGGAGGCCATGTCTTTGAAAGGTATCGAAATCGCGAGCGAAGAAGACGAGCCTGTATTGGCTGTTGCGGAGCCTGAAACAGCACCCCCTCCCCCTGTTTCTGACCCTGTTGTCAAGGAAACCAAGCCTACTAATAAGAAAGCTGTCAAACCCAAGTGGCTGAAAATGTAA

Protein sequence

MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELPNTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNHTLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVYFSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETKPTNKKAVKPKWLKM

Homology

[Close]

BLAST of Cp4.1LG01g25420 vs. ExPASy Swiss-Prot
Match: Q9LK22 (Plant UBX domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PUX1 PE=1 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 6.0e-71
Identity = 145/254 (57.09%), Postives = 180/254 (70.87%), Query Frame = 0


Query: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60
           M  DD     LKRRR      +  A  SA+AK+   +EK GRE+RVFET   S    ++ 
Sbjct: 1   MFVDDPSLHTLKRRRLEITD-SMEASSSAQAKIADMREKLGREVRVFETSSISQRPSQVS 60

Query: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120
           +   E+DDFYEFT  D+YR+LA++K++K LKTRKIREAEEAAR+S++TK  +RVRFPDNH
Sbjct: 61  SADDESDDFYEFTPADFYRLLATKKEDKSLKTRKIREAEEAARRSKLTKAVIRVRFPDNH 120

Query: 121 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180
           TLEATFHPSE +Q L+DL+ +VVA P++PFY+YT PPKKQIKD +QDFYSAGFVPGAIVY
Sbjct: 121 TLEATFHPSEKIQGLIDLVKRVVAHPDVPFYLYTTPPKKQIKDFSQDFYSAGFVPGAIVY 180

Query: 181 FSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK 240
           FS DQP+ +   S  YLNEE +SLK +E  ++  EPV + +EP T     V  PV  E K
Sbjct: 181 FSNDQPKDDGGSSTPYLNEEILSLKDLEAMTKAVEPVESSSEPATVDSSAV--PVEHERK 240

Query: 241 PTNKKAVKPKWLKM 255
            T KK  KPKW KM
Sbjct: 241 STEKKTTKPKWFKM 251

[Close]

BLAST of Cp4.1LG01g25420 vs. ExPASy Swiss-Prot
Match: Q8VBT9 (Tether containing UBX domain for GLUT4 OS=Mus musculus OX=10090 GN=Aspscr1 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.2e-15
Identity = 63/208 (30.29%), Postives = 101/208 (48.56%), Query Frame = 0


Query: 67  DDFYEFTAEDYYRVLASRKDEKY------LKTRKIREAEEAARKSRITKVSVRVRFPDNH 126
           D+F+E T +D  R LA  K E+       L T+  REA+   +  R  KV++RV FPD +
Sbjct: 338 DEFFEVTVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQMKEKLERYPKVALRVLFPDRY 397

Query: 127 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 186
            L+  F PSET+  L D +   +  PEL FY++ APPK  + D T   + A   P A+V+
Sbjct: 398 ILQGFFRPSETVGDLRDFVRSHLGNPELSFYLFIAPPKMVLDDHTLTLFQANLFPAALVH 457

Query: 187 FSYDQPEGEAVGSVAYLNEEAMSLKGIEIA-----SEEDEPVLAVAEPETAPPPPVS--- 246
           F  ++P G  +      +  + S   + +A     +    P+L   +P +    P++   
Sbjct: 458 FGAEEPTGLYLEPGLLEHTVSPSTADVLVARCMSRASGSPPLLPAPDPVSLESEPIAEDG 517

Query: 247 -----DPVVKETKPTNKKAVK-PKWLKM 255
                +P+    +P  +   K PKWLK+
Sbjct: 518 ALGPPEPIQGTAQPVKRSLGKVPKWLKL 545

[Close]

BLAST of Cp4.1LG01g25420 vs. ExPASy Swiss-Prot
Match: Q9BZE9 (Tether containing UBX domain for GLUT4 OS=Homo sapiens OX=9606 GN=ASPSCR1 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.6e-15
Identity = 68/209 (32.54%), Postives = 99/209 (47.37%), Query Frame = 0


Query: 67  DDFYEFTAEDYYRVLASRKDEKY------LKTRKIREAEEAARKSRITKVSVRVRFPDNH 126
           D+F+E T +D  R LA  K E+       L T+  REA+   +  R  KV++RV FPD +
Sbjct: 342 DEFFELTVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRY 401

Query: 127 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 186
            L+  F PSET+  L D +   +  PEL FY++  PPK  + D TQ  + A   P A+V+
Sbjct: 402 VLQGFFRPSETVGDLRDFVRSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVH 461

Query: 187 FSYDQPEGEAVGSVAYLNEEAMSLKGIEI-ASEEDEPVLAVAEPETAP-PPPVSDPVVKE 246
              ++P G  V     L E A+S    ++  +           P  AP P P S+P  +E
Sbjct: 462 LGAEEPAG--VYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEE 521

Query: 247 ------------TKPTNKKAVK-PKWLKM 255
                        +P  +   K PKWLK+
Sbjct: 522 GALVPPEPIPGTAQPVKRSLGKVPKWLKL 548

[Close]

BLAST of Cp4.1LG01g25420 vs. NCBI nr
Match: XP_023513573.1 (plant UBX domain-containing protein 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 492 bits (1267), Expect = 2.98e-175
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60
           MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP
Sbjct: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60

Query: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120
           NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH
Sbjct: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120

Query: 121 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180
           TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY
Sbjct: 121 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180

Query: 181 FSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK 240
           FSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK
Sbjct: 181 FSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK 240

Query: 241 PTNKKAVKPKWLKM 254
           PTNKKAVKPKWLKM
Sbjct: 241 PTNKKAVKPKWLKM 254

[Close]

BLAST of Cp4.1LG01g25420 vs. NCBI nr
Match: KAG6602660.1 (Plant UBX domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 491 bits (1263), Expect = 1.21e-174
Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 0


Query: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60
           MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP
Sbjct: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60

Query: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120
           NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH
Sbjct: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120

Query: 121 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180
           TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY
Sbjct: 121 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180

Query: 181 FSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK 240
           FSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK
Sbjct: 181 FSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK 240

Query: 241 PTNKKAVKPKWLKM 254
           PTNKK VKPKWLKM
Sbjct: 241 PTNKKVVKPKWLKM 254

[Close]

BLAST of Cp4.1LG01g25420 vs. NCBI nr
Match: XP_022955480.1 (plant UBX domain-containing protein 1 [Cucurbita moschata])

HSP 1 Score: 486 bits (1252), Expect = 5.77e-173
Identity = 251/254 (98.82%), Postives = 252/254 (99.21%), Query Frame = 0


Query: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60
           MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP
Sbjct: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60

Query: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120
           NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH
Sbjct: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120

Query: 121 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180
           TLEATFHPSETMQALVDLL+KVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY
Sbjct: 121 TLEATFHPSETMQALVDLLSKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180

Query: 181 FSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK 240
           FSYDQPEGEAVG VAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK
Sbjct: 181 FSYDQPEGEAVGWVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK 240

Query: 241 PTNKKAVKPKWLKM 254
           PTNKK VKPKWLKM
Sbjct: 241 PTNKKVVKPKWLKM 254

[Close]

BLAST of Cp4.1LG01g25420 vs. NCBI nr
Match: XP_022990811.1 (plant UBX domain-containing protein 1 [Cucurbita maxima])

HSP 1 Score: 485 bits (1249), Expect = 1.65e-172
Identity = 250/254 (98.43%), Postives = 252/254 (99.21%), Query Frame = 0


Query: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60
           MVWDDSYSLALKRRRFTYN+INSMADESAKAK LGAKEKFGREIRVFETLPPSSSSDELP
Sbjct: 1   MVWDDSYSLALKRRRFTYNNINSMADESAKAKFLGAKEKFGREIRVFETLPPSSSSDELP 60

Query: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120
           NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH
Sbjct: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120

Query: 121 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180
           TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY
Sbjct: 121 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180

Query: 181 FSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK 240
           FSYDQPEGEAVGSVAYLNEEAMSLKGIEIA+EEDEPVLAV EPETAPPPPVSDPVVKETK
Sbjct: 181 FSYDQPEGEAVGSVAYLNEEAMSLKGIEIANEEDEPVLAVVEPETAPPPPVSDPVVKETK 240

Query: 241 PTNKKAVKPKWLKM 254
           PTNKKAVKPKWLKM
Sbjct: 241 PTNKKAVKPKWLKM 254

[Close]

BLAST of Cp4.1LG01g25420 vs. NCBI nr
Match: KAG7033346.1 (Plant UBX domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 461 bits (1185), Expect = 9.77e-163
Identity = 242/255 (94.90%), Postives = 244/255 (95.69%), Query Frame = 0


Query: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60
           MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP
Sbjct: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60

Query: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120
           NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH
Sbjct: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120

Query: 121 TLEATFHPSETMQALVDLLTKVV-AQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIV 180
           TLEATFHPSETMQALVDLL+K +     LP    TAPPKKQIKDLTQDFYSAGFVPGAIV
Sbjct: 121 TLEATFHPSETMQALVDLLSKFLRVDSSLPNIADTAPPKKQIKDLTQDFYSAGFVPGAIV 180

Query: 181 YFSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKET 240
           YFSYDQPEGEAVGSVAYLNEEAMSLKGIEI SEEDEPVLAVAEPETAPPPPVSDPVVKET
Sbjct: 181 YFSYDQPEGEAVGSVAYLNEEAMSLKGIEIVSEEDEPVLAVAEPETAPPPPVSDPVVKET 240

Query: 241 KPTNKKAVKPKWLKM 254
           KPTNKKAVKPKWLKM
Sbjct: 241 KPTNKKAVKPKWLKM 255

[Close]

BLAST of Cp4.1LG01g25420 vs. ExPASy TrEMBL
Match: A0A6J1GV83 (plant UBX domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111457489 PE=4 SV=1)

HSP 1 Score: 486 bits (1252), Expect = 2.79e-173
Identity = 251/254 (98.82%), Postives = 252/254 (99.21%), Query Frame = 0


Query: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60
           MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP
Sbjct: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60

Query: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120
           NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH
Sbjct: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120

Query: 121 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180
           TLEATFHPSETMQALVDLL+KVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY
Sbjct: 121 TLEATFHPSETMQALVDLLSKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180

Query: 181 FSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK 240
           FSYDQPEGEAVG VAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK
Sbjct: 181 FSYDQPEGEAVGWVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK 240

Query: 241 PTNKKAVKPKWLKM 254
           PTNKK VKPKWLKM
Sbjct: 241 PTNKKVVKPKWLKM 254

[Close]

BLAST of Cp4.1LG01g25420 vs. ExPASy TrEMBL
Match: A0A6J1JP00 (plant UBX domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111487594 PE=4 SV=1)

HSP 1 Score: 485 bits (1249), Expect = 8.01e-173
Identity = 250/254 (98.43%), Postives = 252/254 (99.21%), Query Frame = 0


Query: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60
           MVWDDSYSLALKRRRFTYN+INSMADESAKAK LGAKEKFGREIRVFETLPPSSSSDELP
Sbjct: 1   MVWDDSYSLALKRRRFTYNNINSMADESAKAKFLGAKEKFGREIRVFETLPPSSSSDELP 60

Query: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120
           NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH
Sbjct: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120

Query: 121 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180
           TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY
Sbjct: 121 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180

Query: 181 FSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK 240
           FSYDQPEGEAVGSVAYLNEEAMSLKGIEIA+EEDEPVLAV EPETAPPPPVSDPVVKETK
Sbjct: 181 FSYDQPEGEAVGSVAYLNEEAMSLKGIEIANEEDEPVLAVVEPETAPPPPVSDPVVKETK 240

Query: 241 PTNKKAVKPKWLKM 254
           PTNKKAVKPKWLKM
Sbjct: 241 PTNKKAVKPKWLKM 254

[Close]

BLAST of Cp4.1LG01g25420 vs. ExPASy TrEMBL
Match: A0A6J1BXN5 (plant UBX domain-containing protein 1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006540 PE=4 SV=1)

HSP 1 Score: 414 bits (1064), Expect = 1.16e-144
Identity = 218/254 (85.83%), Postives = 229/254 (90.16%), Query Frame = 0


Query: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60
           MV DD YS+ALKRRRFTYN INSMADESAKAK LG +EKFGREIRVFET PPSSS+DE P
Sbjct: 1   MVIDDFYSVALKRRRFTYN-INSMADESAKAKFLGVREKFGREIRVFETSPPSSSADEKP 60

Query: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120
           NTG E DDFYEFTAEDYYRVLA+RKDEK+LKTRKIREAEEAAR+SRITKV VRVRFPDNH
Sbjct: 61  NTGEEADDFYEFTAEDYYRVLATRKDEKFLKTRKIREAEEAARRSRITKVGVRVRFPDNH 120

Query: 121 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180
           TLEATFHPSETM+ LVDLLTKVVAQPELPFYIYT PPKKQIKDLTQDFYSAGFVPGAIVY
Sbjct: 121 TLEATFHPSETMETLVDLLTKVVAQPELPFYIYTTPPKKQIKDLTQDFYSAGFVPGAIVY 180

Query: 181 FSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK 240
           FSYD PEG+A+GSV+YLNEE MSL G+EI SEE E V AVAEPET  PPP   PVVKETK
Sbjct: 181 FSYDLPEGDAIGSVSYLNEEVMSLNGLEIVSEE-ESVSAVAEPETEAPPPAPTPVVKETK 240

Query: 241 PTNKKAVKPKWLKM 254
           PT KKAVKPKWLKM
Sbjct: 241 PTGKKAVKPKWLKM 252

[Close]

BLAST of Cp4.1LG01g25420 vs. ExPASy TrEMBL
Match: A0A1S3B412 (plant UBX domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103485507 PE=4 SV=1)

HSP 1 Score: 412 bits (1058), Expect = 9.86e-144
Identity = 212/254 (83.46%), Postives = 233/254 (91.73%), Query Frame = 0


Query: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60
           MV DDSYSLALKRRRF++  INSMAD+S+KAKLL  KEK+GREIRVFET+PPSSS++ELP
Sbjct: 1   MVCDDSYSLALKRRRFSHT-INSMADQSSKAKLLSVKEKYGREIRVFETMPPSSSTEELP 60

Query: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120
           N G E D FYEFTAEDYYRVLA++KD+KYLKTRK+REAEEAAR+S+ITKVSVRVRFPDNH
Sbjct: 61  NAGEEPDGFYEFTAEDYYRVLATKKDDKYLKTRKLREAEEAARRSKITKVSVRVRFPDNH 120

Query: 121 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180
           TLEATFHPSETMQ LVDLLTKVVAQPELPFYIYT PPKKQIKDLTQDFYSAGFVPGAIVY
Sbjct: 121 TLEATFHPSETMQTLVDLLTKVVAQPELPFYIYTTPPKKQIKDLTQDFYSAGFVPGAIVY 180

Query: 181 FSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK 240
           FSYD PEGE+VGSV+YLNE+ MSLKG+EI SEE+E  LAVAEPETAP  P   PVVKETK
Sbjct: 181 FSYDLPEGESVGSVSYLNEDVMSLKGLEIVSEEEESTLAVAEPETAPSLPAPTPVVKETK 240

Query: 241 PTNKKAVKPKWLKM 254
           PT+KKA+KPKWLKM
Sbjct: 241 PTDKKAIKPKWLKM 253

[Close]

BLAST of Cp4.1LG01g25420 vs. ExPASy TrEMBL
Match: A0A6J1BY82 (plant UBX domain-containing protein 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006540 PE=4 SV=1)

HSP 1 Score: 409 bits (1050), Expect = 1.75e-142
Identity = 218/257 (84.82%), Postives = 229/257 (89.11%), Query Frame = 0


Query: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60
           MV DD YS+ALKRRRFTYN INSMADESAKAK LG +EKFGREIRVFET PPSSS+DE P
Sbjct: 1   MVIDDFYSVALKRRRFTYN-INSMADESAKAKFLGVREKFGREIRVFETSPPSSSADEKP 60

Query: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120
           NTG E DDFYEFTAEDYYRVLA+RKDEK+LKTRKIREAEEAAR+SRITKV VRVRFPDNH
Sbjct: 61  NTGEEADDFYEFTAEDYYRVLATRKDEKFLKTRKIREAEEAARRSRITKVGVRVRFPDNH 120

Query: 121 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180
           TLEATFHPSETM+ LVDLLTKVVAQPELPFYIYT PPKKQIKDLTQDFYSAGFVPGAIVY
Sbjct: 121 TLEATFHPSETMETLVDLLTKVVAQPELPFYIYTTPPKKQIKDLTQDFYSAGFVPGAIVY 180

Query: 181 FSYDQPEG---EAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVK 240
           FSYD PEG   +A+GSV+YLNEE MSL G+EI SEE E V AVAEPET  PPP   PVVK
Sbjct: 181 FSYDLPEGLKCDAIGSVSYLNEEVMSLNGLEIVSEE-ESVSAVAEPETEAPPPAPTPVVK 240

Query: 241 ETKPTNKKAVKPKWLKM 254
           ETKPT KKAVKPKWLKM
Sbjct: 241 ETKPTGKKAVKPKWLKM 255

[Close]

BLAST of Cp4.1LG01g25420 vs. TAIR 10
Match: AT3G27310.1 (plant UBX domain-containing protein 1 )

HSP 1 Score: 268.9 bits (686), Expect = 4.3e-72
Identity = 145/254 (57.09%), Postives = 180/254 (70.87%), Query Frame = 0


Query: 1   MVWDDSYSLALKRRRFTYNHINSMADESAKAKLLGAKEKFGREIRVFETLPPSSSSDELP 60
           M  DD     LKRRR      +  A  SA+AK+   +EK GRE+RVFET   S    ++ 
Sbjct: 1   MFVDDPSLHTLKRRRLEITD-SMEASSSAQAKIADMREKLGREVRVFETSSISQRPSQVS 60

Query: 61  NTGGETDDFYEFTAEDYYRVLASRKDEKYLKTRKIREAEEAARKSRITKVSVRVRFPDNH 120
           +   E+DDFYEFT  D+YR+LA++K++K LKTRKIREAEEAAR+S++TK  +RVRFPDNH
Sbjct: 61  SADDESDDFYEFTPADFYRLLATKKEDKSLKTRKIREAEEAARRSKLTKAVIRVRFPDNH 120

Query: 121 TLEATFHPSETMQALVDLLTKVVAQPELPFYIYTAPPKKQIKDLTQDFYSAGFVPGAIVY 180
           TLEATFHPSE +Q L+DL+ +VVA P++PFY+YT PPKKQIKD +QDFYSAGFVPGAIVY
Sbjct: 121 TLEATFHPSEKIQGLIDLVKRVVAHPDVPFYLYTTPPKKQIKDFSQDFYSAGFVPGAIVY 180

Query: 181 FSYDQPEGEAVGSVAYLNEEAMSLKGIEIASEEDEPVLAVAEPETAPPPPVSDPVVKETK 240
           FS DQP+ +   S  YLNEE +SLK +E  ++  EPV + +EP T     V  PV  E K
Sbjct: 181 FSNDQPKDDGGSSTPYLNEEILSLKDLEAMTKAVEPVESSSEPATVDSSAV--PVEHERK 240

Query: 241 PTNKKAVKPKWLKM 255
            T KK  KPKW KM
Sbjct: 241 STEKKTTKPKWFKM 251

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g25420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LK22	6.0e-71	57.09	Plant UBX domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PUX1 PE...	[more]
Q8VBT9	1.2e-15	30.29	Tether containing UBX domain for GLUT4 OS=Mus musculus OX=10090 GN=Aspscr1 PE=1 ...	[more]
Q9BZE9	3.6e-15	32.54	Tether containing UBX domain for GLUT4 OS=Homo sapiens OX=9606 GN=ASPSCR1 PE=1 S...	[more]

BLAST of Cp4.1LG01g25420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513573.1	2.98e-175	100.00	plant UBX domain-containing protein 1 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6602660.1	1.21e-174	99.61	Plant UBX domain-containing protein 1, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022955480.1	5.77e-173	98.82	plant UBX domain-containing protein 1 [Cucurbita moschata]	[more]
XP_022990811.1	1.65e-172	98.43	plant UBX domain-containing protein 1 [Cucurbita maxima]	[more]
KAG7033346.1	9.77e-163	94.90	Plant UBX domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperm...	[more]

BLAST of Cp4.1LG01g25420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GV83	2.79e-173	98.82	plant UBX domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111457...	[more]
A0A6J1JP00	8.01e-173	98.43	plant UBX domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC11148759...	[more]
A0A6J1BXN5	1.16e-144	85.83	plant UBX domain-containing protein 1 isoform X2 OS=Momordica charantia OX=3673 ...	[more]
A0A1S3B412	9.86e-144	83.46	plant UBX domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103485507 PE...	[more]
A0A6J1BY82	1.75e-142	84.82	plant UBX domain-containing protein 1 isoform X1 OS=Momordica charantia OX=3673 ...	[more]

BLAST of Cp4.1LG01g25420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27310.1	4.3e-72	57.09	plant UBX domain-containing protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001012	UBX domain	PFAM	PF00789	UBX	coord: 108..170 e-value: 1.9E-6 score: 27.9
IPR001012	UBX domain	PROSITE	PS50033	UBX	coord: 105..181 score: 13.364729
None	No IPR available	GENE3D	3.10.20.90		coord: 106..182 e-value: 1.6E-9 score: 39.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..254
None	No IPR available	PANTHER	PTHR47557:SF3	PLANT UBX DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 5..254
None	No IPR available	CDD	cd16118	UBX2_UBXN9	coord: 110..183 e-value: 5.03694E-33 score: 113.047
IPR044232	Plant UBX domain-containing protein 1	PANTHER	PTHR47557	PLANT UBX DOMAIN-CONTAINING PROTEIN 1	coord: 5..254
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 83..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g25420.1	Cp4.1LG01g25420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035265	organ growth
biological_process	GO:0032984	protein-containing complex disassembly
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0005515	protein binding