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Cp4.1LG01g21980 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATGCCACGTTTTTCGTCTCTGGCCGTCCGATTTAATTCCTATCTTGCTCCGTCTACCCTTATACCTCATCTCCTAGGCCTCGTTTCAATTTCTCTACTCTCTCCGCCGTCTCTCTGCCGAAAAAGGGATTTTTCCAAAGCCGATCTTGATTTATTTAACGTTGTTGTTTTTGATTTCTTCTATTCAGTGTGGTATTGCGAGCGTTTTTGCAGTCGGCGATTCAGATCTCTGTAAGTGTTACTTATTCGAAATCGATCAATTGCCATCGGCAATGCGTTTTCGTTTGATTTGATGGTATCTTTTTGCTTGTTCATTGAGAAAAGAACTCGAATTCGATATTGATTGCAATACCCCCCCCCCNCGTTGTGTTGTTGTTGGGATCTTATCGTTCTTGGAATGTGGTCGATAGGTTCTATCAAAATTCTTCGTTGGCGGTGATTCGATGGAGAAAGAGCTGGTCGAATTGTTTGAAGCGGCGAAGAAGGCTGCAGACGCCGCTGCAGCACCATCAAATGATGGGGGAGCCGAGGAAAGTCGTTGTCTTGATGCCCTACGGCAGCTCAAGAAATTTCCTGTTACATATCAAATCCTCGTTTCCACTCAGGTTTTCTTCTCACTATACTTGAAATTTCTTTCATTTGTTGATGGTGGATGGATACTCAAAATGTAAACAGCCGGTTAGTTTATAAAATCGTACATGGTTTTTGATATGGACTAAGCCTAAATTCCTTGTTTGCTCGTCAACGAATTGGTTTCATAACGAGCTGCGTTACTCTGTTTCATCTGTTATTTACGTTGTTCATAACGAAATCAACTCACTGCAAGTTTTTGGAACAATAATACTGGAGTCATAGCTCTTGTTATATATTGTTTTCTGGATTTTTTTTCAATCCCTTTTCCTTTGTAATTGAGGTCCATTTTCATGCGTTGCTCAAGATTCTATATCTTGCCTTCCATAGGTTGGGAAGCGCCTTCGGCACCTCACCAAACACCCCAAGAAGAAAATACAAGACTATGCTTCTGACTTGATTGAGATGTGGAAGGATATAGTAATCAAGGAGACTAACAAGAATAAGAAGAATGGAAACGGCAACAGTAAAGAAACATCCAAAATTGGTTCTCCCAGTGCAGAGTCCGTTAAGGTGGAGAACTTGCAAAAATCATCTTCCATGAAGGTTGAGAGAGTTTCCAAGGTTGAGCAATTCGATAGGAATGGTTCCACAAGCTCTGTTAAATATTCCAGATCGGCGAGCGCGGTCTCGGAGAAAAACTCTGTTAAGGTTGAAAAAACTGATTCAGTGGTCAAGGTGGAAAGGATGGTTAAAGAAGAGAAGAAAATCTCTATTGAAAAGAAACCAAGCGGCGCTGCTGGACCTCCAAAGCTTACTTCCATGATCAAATCAAAAGATGCTGCTCGGGACAAAATAAGAGAACTTCTCGTTGAGGCCTTCTCCAAGGTTCCTGGTGAGGCTGATGAAGATGTTATGGATGAAGTAAATGCAAGTGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTCGAAAATTGGGGAGGTTCTACTGGGGCACAGAAGGCCAAGTACAGATCTATAATGTTTAACCTCAAGGATCCGAAGAACCCAGATTTTCGAAGAAAAGTTCTTCTTGGGCTTATCAAGCCAGAAAGGATGACCAACTTGAGCACAACTGATATGGCAAGTGATCAGAGAAAACGTGAAAACGAAGAGATTGCACAAAAAGCACTATTCGAATGTGAGCGAGGAGGAGCTCCAAAAGCTACCACCGATCAATTCAAATGTGGTCGATGCGGTCAACGCAAGACGACCTACTATCAATTGCAGACACGGAGTGCTGATGAACCTATGACAACGTTTGTAACTTGTGTAAACTGCAATAATCATTGGAAGTTCTGTTGAGTCTCTCTTATGAGCTGCAGAAAATGTTATTGTTTGGAACAATTTACTGAGCTGCTAGTGTTATTTTGCTTTGACACTGGTTGCAATCTGTAATCTCAGTCCACATCACTACATTTAGGACGTAGGAGGTTCTGTACCGTAGGATTTTCAAGTACCAATTTGTCGAGAAATTCAGTGTATAAACTTGTCTATTTCTTATTTCCTTCGGTATTTGTCTGAGTTGCGTACTTCCAAATAACTTGTGTTTCCACTAGTGCTTGTATCATTTCAGTTCTTCAGCGATGTTCATTGGAAGGGCGTAAACTAATGAAAGGTACAATAATGGTTCAGACCAACCAAATCGACTCGGTGTGAAAATCTCTCTAGCATTTTAGAACTTATCCATAAGAATGTAATATACATAATATTGATAGAACAGATTCATGTCTCCTTATTAACGTACATTTGAAACAAGCAAAAGGTAGCCGTCTATAGCTGAGATCGCGGTTGAGCTTGATTGAGCTTGTAATGCTTCACAAAGTTAGCAGAGATCTAAAATCGTCAAAAGAATGAACAAACATCACCTTGTTATTTCCTCTGCATGCTTCTTCTTGATGCATTCAACCCTCTAAAGACTTGGCTTGGTGAAGAATACCCCATGAGTCGATGAAGTGGGGAATTTGATTTGGTCGATAAATTTCCAACTTTGGAGGACAACTTCTCAGCCTTGTAGCCATGGGAGGATGGATCACCAGACTGGTAACTCTTCTTTAGACTTTCAGTTTTGTTTTGAGACCACTTTGAACTAAGCTCTTTCTCCATTTCGTCTCGCCGAGACGAACGTGGTAAGACAACAGAATCGCCTATTTCTCTCGAGCCACTTTTGCTGATAGCAACCCCATAGCCATCGAGCTTATCGGCCTCAGATGGTGGAGGTTCTGCAACACTCGGTACATATGGAACAATATGAGTTCTGCTCTGAAGAGAAAACTCAAGAATCTTAGAGCAATGACCGCACTTGAGCCGATAGCATCGTCTTTTCACCAAGAGAAATTCTGCAGGAATCTGCAGTAACTTCAAGCAGTAGTAACAAGTTATAAACGGGGCACCTCCAGCCACTGGCCGTAGATGATGCTTGGCCACATGATTTTGATGGCTCATATGATCAGACTGCATACGAATGCCCCTTGCAGATAACTGCGCGCTTACAAAACGTTGGGGACTAGATGCACACGAGCTGTATTGACTATAATAGTCGTGATCGATATGCGCCATACGGGCCCCTTGATTATGCCAGTGTTCAGATGGAAGCAGCTGCATTGAGTGTGGGATGTGTTCAATGCCATAGTAATTAACCTGAGGACCACTAACAGCCTTTACAGCAGAAGTCATCCGAGATAAAGAATGTCGTTCGAGATAATTACTTTGAGGCCCTCTTCTTCGTGAGTAAGAAGGATATTCTGTGTCATGCCATGTATCCTTCTGAGTAGCTCCGATCGGTACGTTCCCGTTTCGATTACACGTTTTCTCCAATTCATCCTGCAGTTCGTAAACCATTCTCAACAATCTAACCTTGGCTTCATCATGCTCCACAAAACTGTCTGATGAATGCATTCTAGAATCATGGGGTTCGTCGAACATGGAACTAGAAACGCTGTCGTTCTCGTAGCCACCGTCGCGGTCCCTTCCGAGTAACGACAACTTACTTTGATATTTTCCTCTCCTTAACGTGCTTCTGTTTTGCATATCCTGTCTTCTATGTTGCAGCATATCATTTTGATTCCTTTCATGATATTCTATGCCATAATGGTTCTCACGAGGCAAACTTTTCCAGGAACTCCTTGTTTCAATCGGAATTTCGGAATCTCTAGCCACTGCATTATTGTTCATCAGGGACTCTTCTCTTCTGGGACCGTCGGAAGCTTCTTGAATGTTCTTTAACGAACGTCTTTGACGATCCAAAAACTGATCATCCATTCCATCATATGAAGATACACTTCCATCATATGCAAAAGAACTTCTGGTTTTCAAAGATTTGACCATACCAGTAGCGCAATGATTCACTTCCGTACAAGCAAAATTATCGACAGGAATTCGATGATCGGTATCATGGCTAATCGTTTCTTCGTGTTCTTCTACTCGTGCAGTACGAGGAGCAAGAATCTTAGATGGAATGCTTGTCCCCATAATAGAACTTGTAGCGACTGCATTTGAAATACCTGAGCTTTCTAAATTGGAATGAGTCTCCTTCCAATTGTCTGGACTTTCTTCTCCTGACAGGAAGATCTCATCAACTATGTCATCTCCCGAACGGTCTCCACTTGAGAGCTTGTCTTTCTCAAGATTAGCAACCGCATTCGCAAAAGATACTCGAACCGAAGATCCAGATTGGTCATCATTGGTGGCACTCGTTCGGTGTTTGCTCAAAGATATCTGAACAGGATGCTCCCTGTGGTTGTCTTCGTCTTCCTTTTGATCTTTCTCATCAGTTGGATCCAAAACAGACTCACCGGAGAATGGGATCGTTATTACTTCATGGTTTAACGTGCTCGTTTCTGTTGTTTTTATAGGATCTCGTCCTGAGAGGTCAGCATTCCCAGGAGAAGCATTAGAGCAGCTCGGTTGCTCGTCATGGCAAGCCTGGGATTCATCATTGCTTCCAGCATTATTTAGGCATTCGCTCGACTTAATATGAGCAAGCTGTTCCTGACTAACATCCCCAGATTCTTTCTGATCCTTCACGTCTGTCGGGTCTATAGAACACTCACCGGAGGACGGAATAGTTATTTCAGGACTTGAAATGCTATATTCCTCTTGTTCTGGAGCATCATCTTGGTATGGGAGCTCACCATTCTCATGATAAGCGCACTCTTCTTCACGATACACTTGATTTGGAAATCCTGATGGCCCTTCATGAACAGCACGAGATTCATCGTCGTTTCTAGCATAATTTAGGCGCTCACCCAACTTCCTACGAAC TATGCCACGTTTTTCGTCTCTGGCCGTCCGATTTAATTCCTATCTTGCTCCGTCTACCCTTATACCTCATCTCCTAGGCCTCGTTTCAATTTCTCTACTCTCTCCGCCGTCTCTCTGCCGAAAAAGGGATTTTTCCAAAGCCGATCTTGATTTATTTAACGTTGTTGTTTTTGATTTCTTCTATTCAGTGTGGTATTGCGAGCGTTTTTGCAGTCGGCGATTCAGATCTCTGTTGGGAAGCGCCTTCGGCACCTCACCAAACACCCCAAGAAGAAAATACAAGACTATGCTTCTGACTTGATTGAGATGTGGAAGGATATAGTAATCAAGGAGACTAACAAGAATAAGAAGAATGGAAACGGCAACAGTAAAGAAACATCCAAAATTGGTTCTCCCAGTGCAGAGTCCGTTAAGGTGGAGAACTTGCAAAAATCATCTTCCATGAAGGTTGAGAGAGTTTCCAAGGTTGAGCAATTCGATAGGAATGGTTCCACAAGCTCTGTTAAATATTCCAGATCGGCGAGCGCGGTCTCGGAGAAAAACTCTGTTAAGGTTGAAAAAACTGATTCAGTGGTCAAGGTGGAAAGGATGGTTAAAGAAGAGAAGAAAATCTCTATTGAAAAGAAACCAAGCGGCGCTGCTGGACCTCCAAAGCTTACTTCCATGATCAAATCAAAAGATGCTGCTCGGGACAAAATAAGAGAACTTCTCGTTGAGGCCTTCTCCAAGGTTCCTGGTGAGGCTGATGAAGATGTTATGGATGAAGTAAATGCAAGTGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTCGAAAATTGGGGAGGTTCTACTGGGGCACAGAAGGCCAAGTACAGATCTATAATGTTTAACCTCAAGGATCCGAAGAACCCAGATTTTCGAAGAAAAGTTCTTCTTGGGCTTATCAAGCCAGAAAGGATGACCAACTTGAGCACAACTGATATGGCAAGTGATCAGAGAAAACGTGAAAACGAAGAGATTGCACAAAAAGCACTATTCGAATGTGAGCGAGGAGGAGCTCCAAAAGCTACCACCGATCAATTCAAATGTGGTCGATGCGGTCAACGCAAGACGACCTACTATCAATTGCAGACACGGAGTGCTGATGAACCTATGACAACGTTTGTAACTTGTGTAAACTGCAATAATCATTGGAAGTTCTGTTGAGTCTCTCTTATGAGCTGCAGAAAATGTTATTGTTTGGAACAATTTACTGAGCTGCTAGTGTTATTTTGCTTTGACACTGGTTGCAATCTGTAATCTCAGTCCACATCACTACATTTAGGACGTAGGAGGTTCTGTACCGTAGGATTTTCAAGTACCAATTTGTCGAGAAATTCAGTGTATAAACTTGTCTATTTCTTATTTCCTTCGGTATTTGTCTGAGTTGCGTACTTCCAAATAACTTGTGTTTCCACTAGTGCTTGTATCATTTCAGTTCTTCAGCGATGTTCATTGGAAGGGCGTAAACTAATGAAAGGTACAATAATGGTTCAGACCAACCAAATCGACTCGGTGTGAAAATCTCTCTAGCATTTTAGAACTTATCCATAAGAATGTAATATACATAATATTGATAGAACAGATTCATGTCTCCTTATTAACGTACATTTGAAACAAGCAAAAGGTAGCCGTCTATAGCTGAGATCGCGGTTGAGCTTGATTGAGCTTGTAATGCTTCACAAAGTTAGCAGAGATCTAAAATCGTCAAAAGAATGAACAAACATCACCTTGTTATTTCCTCTGCATGCTTCTTCTTGATGCATTCAACCCTCTAAAGACTTGGCTTGGTGAAGAATACCCCATGAGTCGATGAAGTGGGGAATTTGATTTGGTCGATAAATTTCCAACTTTGGAGGACAACTTCTCAGCCTTGTAGCCATGGGAGGATGGATCACCAGACTGGTAACTCTTCTTTAGACTTTCAGTTTTGTTTTGAGACCACTTTGAACTAAGCTCTTTCTCCATTTCGTCTCGCCGAGACGAACGTGGTAAGACAACAGAATCGCCTATTTCTCTCGAGCCACTTTTGCTGATAGCAACCCCATAGCCATCGAGCTTATCGGCCTCAGATGGTGGAGGTTCTGCAACACTCGGTACATATGGAACAATATGAGTTCTGCTCTGAAGAGAAAACTCAAGAATCTTAGAGCAATGACCGCACTTGAGCCGATAGCATCGTCTTTTCACCAAGAGAAATTCTGCAGGAATCTGCAGTAACTTCAAGCAGTAGTAACAAGTTATAAACGGGGCACCTCCAGCCACTGGCCGTAGATGATGCTTGGCCACATGATTTTGATGGCTCATATGATCAGACTGCATACGAATGCCCCTTGCAGATAACTGCGCGCTTACAAAACGTTGGGGACTAGATGCACACGAGCTGTATTGACTATAATAGTCGTGATCGATATGCGCCATACGGGCCCCTTGATTATGCCAGTGTTCAGATGGAAGCAGCTGCATTGAGTGTGGGATGTGTTCAATGCCATAGTAATTAACCTGAGGACCACTAACAGCCTTTACAGCAGAAGTCATCCGAGATAAAGAATGTCGTTCGAGATAATTACTTTGAGGCCCTCTTCTTCGTGAGTAAGAAGGATATTCTGTGTCATGCCATGTATCCTTCTGAGTAGCTCCGATCGGTACGTTCCCGTTTCGATTACACGTTTTCTCCAATTCATCCTGCAGTTCGTAAACCATTCTCAACAATCTAACCTTGGCTTCATCATGCTCCACAAAACTGTCTGATGAATGCATTCTAGAATCATGGGGTTCGTCGAACATGGAACTAGAAACGCTGTCGTTCTCGTAGCCACCGTCGCGGTCCCTTCCGAGTAACGACAACTTACTTTGATATTTTCCTCTCCTTAACGTGCTTCTGTTTTGCATATCCTGTCTTCTATGTTGCAGCATATCATTTTGATTCCTTTCATGATATTCTATGCCATAATGGTTCTCACGAGGCAAACTTTTCCAGGAACTCCTTGTTTCAATCGGAATTTCGGAATCTCTAGCCACTGCATTATTGTTCATCAGGGACTCTTCTCTTCTGGGACCGTCGGAAGCTTCTTGAATGTTCTTTAACGAACGTCTTTGACGATCCAAAAACTGATCATCCATTCCATCATATGAAGATACACTTCCATCATATGCAAAAGAACTTCTGGTTTTCAAAGATTTGACCATACCAGTAGCGCAATGATTCACTTCCGTACAAGCAAAATTATCGACAGGAATTCGATGATCGGTATCATGGCTAATCGTTTCTTCGTGTTCTTCTACTCGTGCAGTACGAGGAGCAAGAATCTTAGATGGAATGCTTGTCCCCATAATAGAACTTGTAGCGACTGCATTTGAAATACCTGAGCTTTCTAAATTGGAATGAGTCTCCTTCCAATTGTCTGGACTTTCTTCTCCTGACAGGAAGATCTCATCAACTATGTCATCTCCCGAACGGTCTCCACTTGAGAGCTTGTCTTTCTCAAGATTAGCAACCGCATTCGCAAAAGATACTCGAACCGAAGATCCAGATTGGTCATCATTGGTGGCACTCGTTCGGTGTTTGCTCAAAGATATCTGAACAGGATGCTCCCTGTGGTTGTCTTCGTCTTCCTTTTGATCTTTCTCATCAGTTGGATCCAAAACAGACTCACCGGAGAATGGGATCGTTATTACTTCATGGTTTAACGTGCTCGTTTCTGTTGTTTTTATAGGATCTCGTCCTGAGAGGTCAGCATTCCCAGGAGAAGCATTAGAGCAGCTCGGTTGCTCGTCATGGCAAGCCTGGGATTCATCATTGCTTCCAGCATTATTTAGGCATTCGCTCGACTTAATATGAGCAAGCTGTTCCTGACTAACATCCCCAGATTCTTTCTGATCCTTCACGTCTGTCGGGTCTATAGAACACTCACCGGAGGACGGAATAGTTATTTCAGGACTTGAAATGCTATATTCCTCTTGTTCTGGAGCATCATCTTGGTATGGGAGCTCACCATTCTCATGATAAGCGCACTCTTCTTCACGATACACTTGATTTGGAAATCCTGATGGCCCTTCATGAACAGCACGAGATTCATCGTCGTTTCTAGCATAATTTAGGCGCTCACCCAACTTCCTACGAAC ATGTGGAAGGATATAGTAATCAAGGAGACTAACAAGAATAAGAAGAATGGAAACGGCAACAGTAAAGAAACATCCAAAATTGGTTCTCCCAGTGCAGAGTCCGTTAAGGTGGAGAACTTGCAAAAATCATCTTCCATGAAGGTTGAGAGAGTTTCCAAGGTTGAGCAATTCGATAGGAATGGTTCCACAAGCTCTGTTAAATATTCCAGATCGGCGAGCGCGGTCTCGGAGAAAAACTCTGTTAAGGTTGAAAAAACTGATTCAGTGGTCAAGGTGGAAAGGATGGTTAAAGAAGAGAAGAAAATCTCTATTGAAAAGAAACCAAGCGGCGCTGCTGGACCTCCAAAGCTTACTTCCATGATCAAATCAAAAGATGCTGCTCGGGACAAAATAAGAGAACTTCTCGTTGAGGCCTTCTCCAAGGTTCCTGGTGAGGCTGATGAAGATGTTATGGATGAAGTAAATGCAAGTGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTCGAAAATTGGGGAGGTTCTACTGGGGCACAGAAGGCCAAGTACAGATCTATAATGTTTAACCTCAAGGATCCGAAGAACCCAGATTTTCGAAGAAAAGTTCTTCTTGGGCTTATCAAGCCAGAAAGGATGACCAACTTGAGCACAACTGATATGGCAAGTGATCAGAGAAAACGTGAAAACGAAGAGATTGCACAAAAAGCACTATTCGAATGTGAGCGAGGAGGAGCTCCAAAAGCTACCACCGATCAATTCAAATGTGGTCGATGCGGTCAACGCAAGACGACCTACTATCAATTGCAGACACGGAGTGCTGATGAACCTATGACAACGTTTGTAACTTGTGTAAACTGCAATAATCATTGGAAGTTCTGTTGA MWKDIVIKETNKNKKNGNGNSKETSKIGSPSAESVKVENLQKSSSMKVERVSKVEQFDRNGSTSSVKYSRSASAVSEKNSVKVEKTDSVVKVERMVKEEKKISIEKKPSGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDMASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC Homology
BLAST of Cp4.1LG01g21980 vs. ExPASy Swiss-Prot
Match: Q9ZVH8 (Transcription elongation factor TFIIS OS=Arabidopsis thaliana OX=3702 GN=TFIIS PE=1 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 2.7e-78 Identity = 165/301 (54.82%), Postives = 205/301 (68.11%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. ExPASy Swiss-Prot
Match: Q15560 (Transcription elongation factor A protein 2 OS=Homo sapiens OX=9606 GN=TCEA2 PE=1 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.6e-27 Identity = 68/171 (39.77%), Postives = 100/171 (58.48%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. ExPASy Swiss-Prot
Match: P49373 (Transcription elongation factor S-II OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tfs1 PE=3 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.8e-26 Identity = 57/136 (41.91%), Postives = 86/136 (63.24%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. ExPASy Swiss-Prot
Match: Q148K0 (Transcription elongation factor A protein 2 OS=Bos taurus OX=9913 GN=TCEA2 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.1e-26 Identity = 68/171 (39.77%), Postives = 98/171 (57.31%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. ExPASy Swiss-Prot
Match: P52652 (Putative transcription elongation factor S-II OS=Caenorhabditis elegans OX=6239 GN=T24H10.1 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 7.6e-25 Identity = 71/215 (33.02%), Postives = 109/215 (50.70%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. NCBI nr
Match: XP_023531955.1 (transcription elongation factor TFIIS-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 560 bits (1443), Expect = 1.91e-199 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. NCBI nr
Match: XP_022957122.1 (transcription elongation factor TFIIS-like [Cucurbita moschata]) HSP 1 Score: 555 bits (1429), Expect = 2.59e-197 Identity = 292/295 (98.98%), Postives = 294/295 (99.66%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. NCBI nr
Match: KAG7033260.1 (Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 551 bits (1420), Expect = 6.07e-196 Identity = 290/295 (98.31%), Postives = 293/295 (99.32%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. NCBI nr
Match: XP_022989946.1 (transcription elongation factor TFIIS-like [Cucurbita maxima]) HSP 1 Score: 548 bits (1411), Expect = 1.43e-194 Identity = 289/295 (97.97%), Postives = 292/295 (98.98%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. NCBI nr
Match: KAG6602582.1 (Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 553 bits (1426), Expect = 2.29e-192 Identity = 291/295 (98.64%), Postives = 294/295 (99.66%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. ExPASy TrEMBL
Match: A0A6J1GYA3 (transcription elongation factor TFIIS-like OS=Cucurbita moschata OX=3662 GN=LOC111458597 PE=4 SV=1) HSP 1 Score: 555 bits (1429), Expect = 1.25e-197 Identity = 292/295 (98.98%), Postives = 294/295 (99.66%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. ExPASy TrEMBL
Match: A0A6J1JLK7 (transcription elongation factor TFIIS-like OS=Cucurbita maxima OX=3661 GN=LOC111486982 PE=4 SV=1) HSP 1 Score: 548 bits (1411), Expect = 6.90e-195 Identity = 289/295 (97.97%), Postives = 292/295 (98.98%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. ExPASy TrEMBL
Match: A0A0A0KDH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014610 PE=4 SV=1) HSP 1 Score: 504 bits (1299), Expect = 6.50e-178 Identity = 266/295 (90.17%), Postives = 278/295 (94.24%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. ExPASy TrEMBL
Match: A0A5A7U9K1 (Transcription elongation factor TFIIS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002160 PE=4 SV=1) HSP 1 Score: 503 bits (1294), Expect = 3.75e-177 Identity = 264/295 (89.49%), Postives = 277/295 (93.90%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. ExPASy TrEMBL
Match: A0A1S3C448 (transcription elongation factor TFIIS OS=Cucumis melo OX=3656 GN=LOC103496629 PE=4 SV=1) HSP 1 Score: 503 bits (1294), Expect = 3.75e-177 Identity = 264/295 (89.49%), Postives = 277/295 (93.90%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. TAIR 10
Match: AT2G38560.1 (transcript elongation factor IIS ) HSP 1 Score: 293.5 bits (750), Expect = 1.9e-79 Identity = 165/301 (54.82%), Postives = 205/301 (68.11%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. TAIR 10
Match: AT2G42730.1 (F-box family protein ) HSP 1 Score: 101.7 bits (252), Expect = 1.1e-21 Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. TAIR 10
Match: AT4G18720.1 (Transcription factor IIS protein ) HSP 1 Score: 99.4 bits (246), Expect = 5.2e-21 Identity = 56/111 (50.45%), Postives = 71/111 (63.96%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. TAIR 10
Match: AT5G42325.1 (Transcription factor IIS protein ) HSP 1 Score: 69.7 bits (169), Expect = 4.4e-12 Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 0
BLAST of Cp4.1LG01g21980 vs. TAIR 10
Match: AT5G25520.1 (SPOC domain / Transcription elongation factor S-II protein ) HSP 1 Score: 60.5 bits (145), Expect = 2.7e-09 Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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