Cp4.1LG01g20340 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g20340
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Histone-lysine N-methyltransferase
Location	Cp4.1LG01: 17325332 .. 17326828 (+)
RNA-Seq Expression	Cp4.1LG01g20340
Synteny	Cp4.1LG01g20340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATAGAAAGAAAGAAAAAGAAAAAAGAAATAAAAATCCCTAAAAACGGGCCCAGGCTCGATCGGTGCAGTGGCCGAGCTCCAACCGAAGAGGGTTCAGTCGGAGGATTACGGTGTTTCTCCGCGATCAGATTTGCACAAACAGATAGAGAGATGCGAGGTACTGGTGGACCTCTTCTCTGCATAGGCGATCTTCTGTGCGATGTCGGAGAAGAAGAAGCCGGAGAAGGAAAGGGATCTAATGAAACCCCTAAATCAGTAATATCATCAACTTCTTCCTCTGCTTCCGTTTCCACTCTTCCGCTCGCATCAGAAATCCCCGATCTCCCCAAACTCTTTCAGGTTCCCTGTTTATCTTTCGATTTTTTATTTTTCGCTTTCTTTTCTGGTTGTCCTGTAAGTCATTGAGTACTCTGGTAATTGATGCTTCGATTACGGTTTCGTACGCTTTGAATGCAGATTGTAGTATCGCGAATGTGATTTTTGAGGATTGCGAATATTTTGTAATGAGCTTGATGTTTATTTCATATTCTAATCTTCTTTTGCTTCAGGAAAACTACGACCAATTGAACAAATCATTCGATGATAATGACCACTCTTGGACAGCTTTGACGTTGAAGGTAGGGCGTTTCTTGTGTTTGACAATCAATTTGAATGATTCAGTGATATGAACTTTACTTTCTAACAATTTACAACCTCATTTCCTTTGATTTTGAAAGACCGCTTCGTGTTTGTGCAAAGAAATTAGCATTATACTATCCAGCAAATTGGCTTCTATTTCCTTGTGACTTCATTTTTGGGGCATTTTCAGATGTGCAGTGCTCTTGATACTGCTAGTAAATTGGTTGAATCAACCAACTCAAATTCGAGATTTTTGTTGGAGAAGATTGTGGAGCTTGAACAGGTTTTGGAAAAGGGGGATTCTACAAGAGAGGCGGCCATGGCCATCCAAACCAGTTTTAGCTCTCAAGTTGCTCAGGACTCCATTTCTTCTCAGAATCAAGGTTAGCATAAGCTTATACATTAAAGGGGTTTCTCATCTTTGTTGATGCATTATGGAAATCTTCTCTTGACAAATACTCGTTTGAGCAGTTGCCATATTCATTGCTTTGATTCATGCAGTTTGATTTCTTATGCAGTTGGTGTAGTCGAGATAAATTTGAGTTTTAATTATTTGTAATCATATTATGATTGGATTAGATTTAGTAGTTCAAGTAAATAGAATAAGGATGGAATGTATGGTTGAGAGACATATGGGGTTCAAAGCTTAGTCAGTTGGACATATAAGATATAGGTTACAGATGTTATTATGCTCATTCCAATGATAGAGTTTAGATTAAATTACAAGTTTAGTTCTTGAGCTTTTGTTTACTTTAATCAAAGGTGTTTCATAGGTTCACAAACACTCAATTTTGTCTAATAGGTCTATATTCTATAAAAATTTGATATCGAGATTGGGAATGATATGGGGATGAAAATGGCTCGTGATCTATATGTAG

mRNA sequence

TATAGAAAGAAAGAAAAAGAAAAAAGAAATAAAAATCCCTAAAAACGGGCCCAGGCTCGATCGGTGCAGTGGCCGAGCTCCAACCGAAGAGGGTTCAGTCGGAGGATTACGGTGTTTCTCCGCGATCAGATTTGCACAAACAGATAGAGAGATGCGAGGTACTGGTGGACCTCTTCTCTGCATAGGCGATCTTCTGTGCGATGTCGGAGAAGAAGAAGCCGGAGAAGGAAAGGGATCTAATGAAACCCCTAAATCAGTAATATCATCAACTTCTTCCTCTGCTTCCGTTTCCACTCTTCCGCTCGCATCAGAAATCCCCGATCTCCCCAAACTCTTTCAGGAAAACTACGACCAATTGAACAAATCATTCGATGATAATGACCACTCTTGGACAGCTTTGACGTTGAAGATGTGCAGTGCTCTTGATACTGCTAGTAAATTGGTTGAATCAACCAACTCAAATTCGAGATTTTTGTTGGAGAAGATTGTGGAGCTTGAACAGGTTTTGGAAAAGGGGGATTCTACAAGAGAGGCGGCCATGGCCATCCAAACCAGTTTTAGCTCTCAAGTTGCTCAGGACTCCATTTCTTCTCAGAATCAAGGTTAGCATAAGCTTATACATTAAAGGGGTTTCTCATCTTTGTTGATGCATTATGGAAATCTTCTCTTGACAAATACTCGTTTGAGCAGTTGCCATATTCATTGCTTTGATTCATGCAGTTTGATTTCTTATGCAGTTGGTGTAGTCGAGATAAATTTGAGTTTTAATTATTTGTAATCATATTATGATTGGATTAGATTTAGTAGTTCAAGTAAATAGAATAAGGATGGAATGTATGGTTGAGAGACATATGGGGTTCAAAGCTTAGTCAGTTGGACATATAAGATATAGGTTACAGATGTTATTATGCTCATTCCAATGATAGAGTTTAGATTAAATTACAAGTTTAGTTCTTGAGCTTTTGTTTACTTTAATCAAAGGTGTTTCATAGGTTCACAAACACTCAATTTTGTCTAATAGGTCTATATTCTATAAAAATTTGATATCGAGATTGGGAATGATATGGGGATGAAAATGGCTCGTGATCTATATGTAG

Coding sequence (CDS)

ATGCGAGGTACTGGTGGACCTCTTCTCTGCATAGGCGATCTTCTGTGCGATGTCGGAGAAGAAGAAGCCGGAGAAGGAAAGGGATCTAATGAAACCCCTAAATCAGTAATATCATCAACTTCTTCCTCTGCTTCCGTTTCCACTCTTCCGCTCGCATCAGAAATCCCCGATCTCCCCAAACTCTTTCAGGAAAACTACGACCAATTGAACAAATCATTCGATGATAATGACCACTCTTGGACAGCTTTGACGTTGAAGATGTGCAGTGCTCTTGATACTGCTAGTAAATTGGTTGAATCAACCAACTCAAATTCGAGATTTTTGTTGGAGAAGATTGTGGAGCTTGAACAGGTTTTGGAAAAGGGGGATTCTACAAGAGAGGCGGCCATGGCCATCCAAACCAGTTTTAGCTCTCAAGTTGCTCAGGACTCCATTTCTTCTCAGAATCAAGGTTAG

Protein sequence

MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLASEIPDLPKLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLEKGDSTREAAMAIQTSFSSQVAQDSISSQNQG

Homology

[Close]

BLAST of Cp4.1LG01g20340 vs. NCBI nr
Match: XP_023516408.1 (uncharacterized protein LOC111780279 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288 bits (736), Expect = 1.06e-97
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLASEIPDLPK 60
           MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLASEIPDLPK
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLASEIPDLPK 60

Query: 61  LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE 120
           LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE
Sbjct: 61  LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE 120

Query: 121 KGDSTREAAMAIQTSFSSQVAQDSISSQNQG 151
           KGDSTREAAMAIQTSFSSQVAQDSISSQNQG
Sbjct: 121 KGDSTREAAMAIQTSFSSQVAQDSISSQNQG 151

[Close]

BLAST of Cp4.1LG01g20340 vs. NCBI nr
Match: KAG7032788.1 (hypothetical protein SDJN02_06838 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 283 bits (723), Expect = 1.02e-95
Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLASEIPDLPK 60
           MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPL SE PDLPK
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETPDLPK 60

Query: 61  LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE 120
           LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE
Sbjct: 61  LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE 120

Query: 121 KGDSTREAAMAIQTSFSSQVAQDSISSQNQG 151
           KGDSTREAAMAIQTSFSSQVAQDSISS+NQG
Sbjct: 121 KGDSTREAAMAIQTSFSSQVAQDSISSRNQG 151

[Close]

BLAST of Cp4.1LG01g20340 vs. NCBI nr
Match: XP_022964546.1 (uncharacterized protein LOC111464539 [Cucurbita moschata])

HSP 1 Score: 282 bits (722), Expect = 1.44e-95
Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLASEIPDLPK 60
           MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPL SE PDLPK
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETPDLPK 60

Query: 61  LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE 120
           LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE
Sbjct: 61  LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE 120

Query: 121 KGDSTREAAMAIQTSFSSQVAQDSISSQNQG 151
           KGDSTREAAMAIQTSFSSQVAQDSISSQ+QG
Sbjct: 121 KGDSTREAAMAIQTSFSSQVAQDSISSQSQG 151

[Close]

BLAST of Cp4.1LG01g20340 vs. NCBI nr
Match: XP_022989818.1 (uncharacterized protein LOC111486891 [Cucurbita maxima])

HSP 1 Score: 280 bits (715), Expect = 1.68e-94
Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLASEIPDLPK 60
           MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLP+ SE PDLPK
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPVVSETPDLPK 60

Query: 61  LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE 120
           LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQ+LE
Sbjct: 61  LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQILE 120

Query: 121 KGDSTREAAMAIQTSFSSQVAQDSISSQNQG 151
           KGDSTREAAMAIQTSFSSQV QDSISS+NQG
Sbjct: 121 KGDSTREAAMAIQTSFSSQVTQDSISSRNQG 151

[Close]

BLAST of Cp4.1LG01g20340 vs. NCBI nr
Match: KAG6602083.1 (DIS3-like exonuclease 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283 bits (723), Expect = 8.20e-86
Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1    MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLASEIPDLPK 60
            MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPL SE PDLPK
Sbjct: 1007 MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETPDLPK 1066

Query: 61   LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE 120
            LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE
Sbjct: 1067 LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE 1126

Query: 121  KGDSTREAAMAIQTSFSSQVAQDSISSQNQG 151
            KGDSTREAAMAIQTSFSSQVAQDSISS+NQG
Sbjct: 1127 KGDSTREAAMAIQTSFSSQVAQDSISSRNQG 1157

[Close]

BLAST of Cp4.1LG01g20340 vs. ExPASy TrEMBL
Match: A0A6J1HJ70 (uncharacterized protein LOC111464539 OS=Cucurbita moschata OX=3662 GN=LOC111464539 PE=4 SV=1)

HSP 1 Score: 282 bits (722), Expect = 6.98e-96
Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLASEIPDLPK 60
           MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPL SE PDLPK
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETPDLPK 60

Query: 61  LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE 120
           LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE
Sbjct: 61  LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE 120

Query: 121 KGDSTREAAMAIQTSFSSQVAQDSISSQNQG 151
           KGDSTREAAMAIQTSFSSQVAQDSISSQ+QG
Sbjct: 121 KGDSTREAAMAIQTSFSSQVAQDSISSQSQG 151

[Close]

BLAST of Cp4.1LG01g20340 vs. ExPASy TrEMBL
Match: A0A6J1JRF3 (uncharacterized protein LOC111486891 OS=Cucurbita maxima OX=3661 GN=LOC111486891 PE=4 SV=1)

HSP 1 Score: 280 bits (715), Expect = 8.15e-95
Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLASEIPDLPK 60
           MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLP+ SE PDLPK
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPVVSETPDLPK 60

Query: 61  LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE 120
           LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQ+LE
Sbjct: 61  LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQILE 120

Query: 121 KGDSTREAAMAIQTSFSSQVAQDSISSQNQG 151
           KGDSTREAAMAIQTSFSSQV QDSISS+NQG
Sbjct: 121 KGDSTREAAMAIQTSFSSQVTQDSISSRNQG 151

[Close]

BLAST of Cp4.1LG01g20340 vs. ExPASy TrEMBL
Match: A0A5D3BZV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00780 PE=4 SV=1)

HSP 1 Score: 243 bits (620), Expect = 2.56e-80
Identity = 129/152 (84.87%), Postives = 139/152 (91.45%), Query Frame = 0


Query: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPL-ASEIPDLP 60
           MRGTGGPLLCIGDLLCDVGEEEA EGKG NETPKS+ S +SSS+SVST     S+ PDLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAVEGKGLNETPKSIPSPSSSSSSVSTTLFDLSQPPDLP 60

Query: 61  KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 120
           +LFQENYDQLNK FDDNDHSWTALTLKMCSALDTA+KLVESTNSNSRFLLEKIVELE VL
Sbjct: 61  QLFQENYDQLNKVFDDNDHSWTALTLKMCSALDTATKLVESTNSNSRFLLEKIVELEHVL 120

Query: 121 EKGDSTREAAMAIQTSFSSQVAQDSISSQNQG 151
           EKGD+TREAAMAIQTS+SSQ+AQDSISS N+G
Sbjct: 121 EKGDATREAAMAIQTSYSSQIAQDSISSLNEG 152

[Close]

BLAST of Cp4.1LG01g20340 vs. ExPASy TrEMBL
Match: A0A1S3BE50 (uncharacterized protein LOC103488633 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103488633 PE=4 SV=1)

HSP 1 Score: 243 bits (620), Expect = 2.93e-80
Identity = 129/152 (84.87%), Postives = 139/152 (91.45%), Query Frame = 0


Query: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPL-ASEIPDLP 60
           MRGTGGPLLCIGDLLCDVGEEEA EGKG NETPKS+ S +SSS+SVST     S+ PDLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAVEGKGLNETPKSIPSPSSSSSSVSTTLFDLSQPPDLP 60

Query: 61  KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 120
           +LFQENYDQLNK FDDNDHSWTALTLKMCSALDTA+KLVESTNSNSRFLLEKIVELE VL
Sbjct: 61  QLFQENYDQLNKVFDDNDHSWTALTLKMCSALDTATKLVESTNSNSRFLLEKIVELEHVL 120

Query: 121 EKGDSTREAAMAIQTSFSSQVAQDSISSQNQG 151
           EKGD+TREAAMAIQTS+SSQ+AQDSISS N+G
Sbjct: 121 EKGDATREAAMAIQTSYSSQIAQDSISSLNEG 152

[Close]

BLAST of Cp4.1LG01g20340 vs. ExPASy TrEMBL
Match: A0A0A0K969 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040570 PE=4 SV=1)

HSP 1 Score: 241 bits (614), Expect = 2.10e-79
Identity = 128/152 (84.21%), Postives = 138/152 (90.79%), Query Frame = 0


Query: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPL-ASEIPDLP 60
           MRGTGGPLLCIGDLLCDVGE+EA EGKG NETP+S+ S +SSS+SVST     S+ PDLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEDEAVEGKGLNETPRSIPSPSSSSSSVSTTIFDLSQPPDLP 60

Query: 61  KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 120
           KLFQENYDQLNK FDDNDHSWTALTLKMCSALDTA+KLVESTNSNSRFLLEKIVELE VL
Sbjct: 61  KLFQENYDQLNKVFDDNDHSWTALTLKMCSALDTATKLVESTNSNSRFLLEKIVELEHVL 120

Query: 121 EKGDSTREAAMAIQTSFSSQVAQDSISSQNQG 151
           EKGD+TREAAMAIQTS+SS VAQDSISS N+G
Sbjct: 121 EKGDATREAAMAIQTSYSSHVAQDSISSLNEG 152

[Close]

BLAST of Cp4.1LG01g20340 vs. TAIR 10
Match: AT4G08240.2 (unknown protein; Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 119.4 bits (298), Expect = 2.5e-27
Identity = 65/139 (46.76%), Postives = 93/139 (66.91%), Query Frame = 0


Query: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLASEIPDLPK 60
           MRG GGPLL IGDLL D+G+E    G      P   +SS S S    + PL     DL +
Sbjct: 1   MRGVGGPLLSIGDLLADLGDE---TGHSPQNHPNPEVSSKSYSDDTISGPL-----DLTR 60

Query: 61  LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE 120
           LFQENYD+LN +F  +DHSWT+LTL++C++L+TA+KLV +T +N+R L EK+ ELE++++
Sbjct: 61  LFQENYDKLNDAFAGSDHSWTSLTLELCTSLETANKLVHATTTNARLLSEKVEELEKIVK 120

Query: 121 KGDSTREAAMAIQTSFSSQ 140
           +GDS   AA  +  + + +
Sbjct: 121 RGDSAVAAARTVHATVNQK 131

[Close]

BLAST of Cp4.1LG01g20340 vs. TAIR 10
Match: AT4G08240.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 119.4 bits (298), Expect = 2.5e-27
Identity = 65/139 (46.76%), Postives = 93/139 (66.91%), Query Frame = 0


Query: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLASEIPDLPK 60
           MRG GGPLL IGDLL D+G+E    G      P   +SS S S    + PL     DL +
Sbjct: 1   MRGVGGPLLSIGDLLADLGDE---TGHSPQNHPNPEVSSKSYSDDTISGPL-----DLTR 60

Query: 61  LFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVLE 120
           LFQENYD+LN +F  +DHSWT+LTL++C++L+TA+KLV +T +N+R L EK+ ELE++++
Sbjct: 61  LFQENYDKLNDAFAGSDHSWTSLTLELCTSLETANKLVHATTTNARLLSEKVEELEKIVK 120

Query: 121 KGDSTREAAMAIQTSFSSQ 140
           +GDS   AA  +  + + +
Sbjct: 121 RGDSAVAAARTVHATVNQK 131

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g20340 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g20340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516408.1	1.06e-97	100.00	uncharacterized protein LOC111780279 [Cucurbita pepo subsp. pepo]	[more]
KAG7032788.1	1.02e-95	98.01	hypothetical protein SDJN02_06838 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022964546.1	1.44e-95	98.01	uncharacterized protein LOC111464539 [Cucurbita moschata]	[more]
XP_022989818.1	1.68e-94	96.03	uncharacterized protein LOC111486891 [Cucurbita maxima]	[more]
KAG6602083.1	8.20e-86	98.01	DIS3-like exonuclease 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG01g20340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJ70	6.98e-96	98.01	uncharacterized protein LOC111464539 OS=Cucurbita moschata OX=3662 GN=LOC1114645...	[more]
A0A6J1JRF3	8.15e-95	96.03	uncharacterized protein LOC111486891 OS=Cucurbita maxima OX=3661 GN=LOC111486891...	[more]
A0A5D3BZV1	2.56e-80	84.87	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BE50	2.93e-80	84.87	uncharacterized protein LOC103488633 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0K969	2.10e-79	84.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040570 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g20340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08240.2	2.5e-27	46.76	unknown protein; Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bac...	[more]
AT4G08240.1	2.5e-27	46.76	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..48
None	No IPR available	PANTHER	PTHR37237	OS02G0567000 PROTEIN	coord: 1..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g20340.1	Cp4.1LG01g20340.1	mRNA