Cp4.1LG01g20110 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGGAGCTGACGTGTATTTCCAAATATTTAGAACTGGTCGTCACTGTCAGCCATATCGTACGGTCCAGATTCACTCCTCACTCGCTGGTTCTCTTTTTATCCACTTCTCCTCCTTCTCCTCCGCTTCTCAGTTTCCCGTTCTCTCTCTCTCTTAACCCACTTTCTCTCTCTAACGTCGCCGGAGAACCACTATGCCGCCGCCGCCAAAGAGGCTCCCAATCAAGAGATCCTCCAGCGAGAAGGAGATCCTCTTCGACGTCGCAGAACCTCCACCAATCGAAAGCCCTAACACCGCCTACGATCACCGTCTTCTCTCCATGCTCTCGCCGAGAAACAATCGGAGACATTCCGATGAGTTTCCATGGTCGTCTCAGCATCTCCGTGCTTGTTGCCTCTGTCGTCGCCGCCTCGTTTCCGGCCGTGACATATACATGTACAAGTAAGTAAAAACAACTATCGATTAAATGGCTGTTCTAGGGCACAGTAAAATTTTAACAAGAAATTGATCGAAATTGATCGAAATTGATCGAAATTTCTCCTTGAATCTTGTAAATCAATCTTGTAAATCGGTGTAAGTGATGGAATTGTTGAGTGAAATTGATGCGATTTTCGGTGCGGCGGTGTGGAAACAGGGGCGAGAGCGCTTTTTGTAGTGCAGAGTGCCGGCAGCAGCAGATGAATCAGGATGAGGCGAAGGAAAAGTATTCGAAGAAAGGACCGTCAGGACCGACCGCCGTAGGAAAAGTCTCTGCAATTAATGGCGAGACTGTCGCCGCCGTGTAGCCGCCATAGATTACTTCAGATTTAAAGCAGCCGCCACCGCTCCAGCCTTCTATCAACGCATATAAATATAATATATATATATATATATAAAGATGTTTCTGCGTACTTAAATGGGGTAACAAATTTTGGAGCTGCTGTATGTGAATGTGAATATTACCCTCTAATTTAAATTAATGTTTTTCTGTTTA GAAGGAGCTGACGTGTATTTCCAAATATTTAGAACTGGTCGTCACTGTCAGCCATATCGTACGGTCCAGATTCACTCCTCACTCGCTGGTTCTCTTTTTATCCACTTCTCCTCCTTCTCCTCCGCTTCTCAGTTTCCCGTTCTCTCTCTCTCTTAACCCACTTTCTCTCTCTAACGTCGCCGGAGAACCACTATGCCGCCGCCGCCAAAGAGGCTCCCAATCAAGAGATCCTCCAGCGAGAAGGAGATCCTCTTCGACGTCGCAGAACCTCCACCAATCGAAAGCCCTAACACCGCCTACGATCACCGTCTTCTCTCCATGCTCTCGCCGAGAAACAATCGGAGACATTCCGATGAGTTTCCATGGTCGTCTCAGCATCTCCGTGCTTGTTGCCTCTGTCGTCGCCGCCTCGTTTCCGGCCGTGACATATACATGTACAAGGGCGAGAGCGCTTTTTGTAGTGCAGAGTGCCGGCAGCAGCAGATGAATCAGGATGAGGCGAAGGAAAAGTATTCGAAGAAAGGACCGTCAGGACCGACCGCCGTAGGAAAAGTCTCTGCAATTAATGGCGAGACTGTCGCCGCCGTGTAGCCGCCATAGATTACTTCAGATTTAAAGCAGCCGCCACCGCTCCAGCCTTCTATCAACGCATATAAATATAATATATATATATATATATAAAGATGTTTCTGCGTACTTAAATGGGGTAACAAATTTTGGAGCTGCTGTATGTGAATGTGAATATTACCCTCTAATTTAAATTAATGTTTTTCTGTTTA ATGCCGCCGCCGCCAAAGAGGCTCCCAATCAAGAGATCCTCCAGCGAGAAGGAGATCCTCTTCGACGTCGCAGAACCTCCACCAATCGAAAGCCCTAACACCGCCTACGATCACCGTCTTCTCTCCATGCTCTCGCCGAGAAACAATCGGAGACATTCCGATGAGTTTCCATGGTCGTCTCAGCATCTCCGTGCTTGTTGCCTCTGTCGTCGCCGCCTCGTTTCCGGCCGTGACATATACATGTACAAGGGCGAGAGCGCTTTTTGTAGTGCAGAGTGCCGGCAGCAGCAGATGAATCAGGATGAGGCGAAGGAAAAGTATTCGAAGAAAGGACCGTCAGGACCGACCGCCGTAGGAAAAGTCTCTGCAATTAATGGCGAGACTGTCGCCGCCGTGTAG MPPPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKEKYSKKGPSGPTAVGKVSAINGETVAAV Homology
BLAST of Cp4.1LG01g20110 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 6.6e-21 Identity = 66/156 (42.31%), Postives = 83/156 (53.21%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.5e-20 Identity = 65/143 (45.45%), Postives = 81/143 (56.64%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 6.2e-11 Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. ExPASy Swiss-Prot
Match: F4JW68 (FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 6.2e-11 Identity = 34/71 (47.89%), Postives = 42/71 (59.15%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.4e-10 Identity = 43/112 (38.39%), Postives = 58/112 (51.79%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. NCBI nr
Match: XP_023547753.1 (uncharacterized protein LOC111806606 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 268 bits (685), Expect = 1.53e-90 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. NCBI nr
Match: KAG6602056.1 (FCS-Like Zinc finger 5, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032749.1 hypothetical protein SDJN02_06799 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 265 bits (677), Expect = 2.53e-89 Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. NCBI nr
Match: XP_022961605.1 (uncharacterized protein LOC111462181 [Cucurbita moschata]) HSP 1 Score: 264 bits (674), Expect = 7.27e-89 Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. NCBI nr
Match: XP_022990553.1 (uncharacterized protein LOC111487400 [Cucurbita maxima]) HSP 1 Score: 259 bits (663), Expect = 3.35e-87 Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. NCBI nr
Match: XP_008460479.1 (PREDICTED: protein MARD1-like [Cucumis melo]) HSP 1 Score: 193 bits (490), Expect = 1.14e-60 Identity = 105/141 (74.47%), Postives = 116/141 (82.27%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. ExPASy TrEMBL
Match: A0A6J1HCQ2 (uncharacterized protein LOC111462181 OS=Cucurbita moschata OX=3662 GN=LOC111462181 PE=3 SV=1) HSP 1 Score: 264 bits (674), Expect = 3.52e-89 Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. ExPASy TrEMBL
Match: A0A6J1JTL9 (uncharacterized protein LOC111487400 OS=Cucurbita maxima OX=3661 GN=LOC111487400 PE=3 SV=1) HSP 1 Score: 259 bits (663), Expect = 1.62e-87 Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. ExPASy TrEMBL
Match: A0A1S3CDU6 (protein MARD1-like OS=Cucumis melo OX=3656 GN=LOC103499283 PE=3 SV=1) HSP 1 Score: 193 bits (490), Expect = 5.50e-61 Identity = 105/141 (74.47%), Postives = 116/141 (82.27%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. ExPASy TrEMBL
Match: A0A5D3DT83 (Protein MARD1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001430 PE=3 SV=1) HSP 1 Score: 189 bits (479), Expect = 2.60e-59 Identity = 104/141 (73.76%), Postives = 115/141 (81.56%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. ExPASy TrEMBL
Match: A0A6J1FHV9 (uncharacterized protein LOC111445578 OS=Cucurbita moschata OX=3662 GN=LOC111445578 PE=3 SV=1) HSP 1 Score: 187 bits (476), Expect = 6.55e-59 Identity = 99/137 (72.26%), Postives = 112/137 (81.75%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 101.7 bits (252), Expect = 4.7e-22 Identity = 66/156 (42.31%), Postives = 83/156 (53.21%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 100.5 bits (249), Expect = 1.0e-21 Identity = 65/143 (45.45%), Postives = 81/143 (56.64%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 68.6 bits (166), Expect = 4.4e-12 Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. TAIR 10
Match: AT4G39795.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 68.6 bits (166), Expect = 4.4e-12 Identity = 34/71 (47.89%), Postives = 42/71 (59.15%), Query Frame = 0
BLAST of Cp4.1LG01g20110 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 66.6 bits (161), Expect = 1.7e-11 Identity = 43/112 (38.39%), Postives = 58/112 (51.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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