Cp4.1LG01g17010 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g17010
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	calmodulin-like
Location	Cp4.1LG01: 10982963 .. 10993787 (+)
RNA-Seq Expression	Cp4.1LG01g17010
Synteny	Cp4.1LG01g17010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTGGTATAACAATGTTTATCCCCAAACTTCAAGCTTCCACGGCTAAGTATGAAGCAAGTGAGATGATCAAAAAGTGTACTAGAAATGGTGATAATGTTCAACTAAAAGCTTTTAGTGGCATTGCTCGAGCTTCAACTCAAGTCAACAATCAAGGTATGGTATCGGAAATCTTTAGAGATAATAAGAATGTCGGGCCCAAGCTTAGTTCAAATACTCAACTAAAGGCATCTACTATGCAATTTAGTCGAGAGCAGATGAAGAAGATTTTTAAATATCATGATAGCGATAAGGATGGTTTTCTCAACCTAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTATTCCATTTGAGAAAGCTTCCTATGGCATGTCATATGCTGATGCAGATAAAGATGGCCTTATTAGTGAGTCTTAACTTGACAAACTCATAGATTATGCCCAAAAATTTATGAAGAAGAAATGAGCTTCTAGACTGTGCCCAAAAATGTCCCTTAAACCCCGGCTCAAATGCAAACCGAACAGTTTGGGATGCATATGACAAAAAGGGTAAGGGGAAATATAAGATTCCTACTGACCGCAAACCCAAGGTTCAAAATGCAGATAATGGAAAATGTTTCCATTGAAATGAAAACGGGCACAGGAAAAGTGATTGCCCAAAATACCTTGCGGAGAAGAAGGCTGAAAAGGCACAACATAGTAAATATGATTTACTAGTTGTAGAAATATATTTAGTAGAGTATGATCACTCAACCTGGATACTAGATTCAGGGGCCACTAATCATATTTGTTCTTTTCTTCAAGAAACTAGTTCCTGGAGAATGCTTGCGGAAGGCGAGATAACACTCGGGGTTGGAACAGAAGAAGTTGTCTCAGAAGGATTAGTAGGAAATTTAAAGTTGTTTTTTGGAGATGGATTCATTATATTAGATAATGTACTTTTTGTTCCTAGAATAGAAAGAAATCTAATATCTATCTCTTGTTTATTAGAACAATTATATAAAGTATCTTTTGAAATTAATGAAGTGTTCATTTGCAAAAGAGGTATTCATATTTGTTCTGCAAAACTAGAAAACAACTTATATATGTTAAAATCGAGTGAAACAAAAGCTATTTTAAATATCGTGATGTTTAAAACCGCTGAAACTCAACATAAACGACAAAAGATTTCTCCTAATACCTATTTTTGGCACTTAAGACTAGGTCACATTAATCTCAATAGGATTGAAAGATTGGTTAAAAGAGGACTTCTAAATCAGTTAGAAGACAACTCTTTACCTCCATGTGAGTTCTGTCTTGAGGGTAAAATGACTCAACGACCTTTTTCCGAAAAAGGTTATAGAGCCAAAGAAATCTTACAACTCGTGCATACTGATCTTTGTGGTCCAATAAATGTCAAAGCACGAGGAGGGTATGAATATTTCATCAGTTTTATTGATGATTATTCAAGGTATGACTATATTTACCTAATGCATTACAAGTCCGAAACTCTTGAAAAGTTCAGAGAGTGTAAGACTAAGGTTGAGAATCTATTAGGAAAAACTATTAAAACACTTCGATCAGATCGAGGTGGAGAATATATGGACTTAAGATTCCAGGACTATATGATAGAACATGGAATAACGTCTCAACTCTCAGCCCCTGGTATGCCACAACAGAACGGTGTATCAGAAATGAGAAATAGAACTCTGTTAAATATGGTTCGATCTATGATGAGTTTTGCTCAATTACCTTATTCGTTTTAGGGATATGTAGTGGAGACTGCTGCATACATTTTGAACATGGTTCCTTCTAAGAGTGTTTCAGAAACACCTTATGAGTTATGAGAGTGCGTAAAAGTAGTTTAGGTCACTTCAGGATTTAGGGATGCCCAGCACATGTGTTGGTGGAAAACCTTAAGAAATTAGAACGTCGTTCAAAATTATGCCTATTCGTAGGATATCCCAAAGAGACGAAAAGTGGAATGTTTTATGACCCTCAAGAAAATAGAGTGTTTGTATCAANTCGTGATGTTTAAAACCGCTGAAACTCAACATAAACGACAAAAGATTTCTCCTAATACCTATTTTTGGCACTTAAGACTAGGTCACATTAATCTCAATAGGATTGAAAGATTGGTTAAAAGAGGACTTCTAAATCAGTTAGAAGACAACTCTTTACCTCCATGTGAGTTCTGTCTTGAGGGTAAAATGACTCAACGACCTTTTTCCGAAAAAGGTTATAGAGCCAAAGAAATCTTACAACTCGTGCATACTGATCTTTGTGGTCCAATAAATGTCAAAGCACGAGGAGGGTATGAATATTTCATCAGTTTTATTGATGATTATTCAAGGTATGACTATATTTACCTAATGCATTACAAGTCCGAAACTCTTGAAAAGTTCAGAGAGTGTAAGACTAAGGTTGAGAATCTATTAGGAAAAACTATTAAAACACTTCGATCAGATCGAGGTGGAGAATATATGGACTTAAGATTCCAGGACTATATGATAGAACATGGAATAACGTCTCAACTCTCAGCCCCTGGTATGCCACAACAGAACGGTGTATCAGAAATGAGAAATAGAACTCTGTTAAATATGGTTCGATCTATGATGAGTTTTGCTCAATTACCTTATTCGTTTTAGGGATATGTAGTGGAGACTGCTGCATACATTTTGAACATGGTTCCTTCTAAGAGTGTTTCAGAAACACCTTATGAGTTATGAGAGTGCGTAAAAGTAGTTTAGGTCACTTCAGGATTTAGGGATGCCCAGCACATGTGTTGGTGGAAAACCTTAAGAAATTAGAACGTCGTTCAAAATTATGCCTATTCGTAGGATATCCCAAAGAGACGAAAAGTGGAATGTTTTATGACCCTCAAGAAAATAGAGTGTTTGTATCAACAAGCGCTACATTCTTAGAGGAAGACCTCGTAAGAAATCATCAACCTCGCAGCAAACTAGTATTGAGTGAGATTTCTAAGGAAGCTACTGATAAAACAACAAGAGTTGTTGATCAGGCTGGTTCTTCAACAAGAGTTGTTGATGGAGCTGACACTTCTGGCAATCACATCCTTCTCAAGAGTTGAGAATGCCTCGACGTAGTGGGAGGGTTATAACTCAACATGGTCGTTACTTGGGTTTGGCAGAAACACAGGTCATCATACCTGATGATGGCGTTGAGGATCCATTGACCTATAAATAGGCAATGAATGATGAAGATAGAGATCAGTGGATCAAAGCCATGAATCTTGAAATGGAGTCAATGTACTTCAATTCAGTTTGCGAACTTGTAGATCAACCAGATGGGGTAAAACCTATTGGTTGCAAATGGATCTACAAGAGGAAACGAGACCAAGCCGATAAGGTACAGACCTTTAAAGCTCGACTTGTAGCAAAGAGTTATACCCAAAGAGAGGGGGTAGACTATGAAGAAACCTTCTCTCCTGTTGTTATGCTTAAATCGATTAGAATACTCTTGTCCATTGCCACATTTTATGATTATGAAACTTGGCAAATGGATGTCAAGACTACCTTTCTAAACGACAATCTTAAGGAGAATATCTATATGGCTCAACTAGAAGGGTTCATTGAACAGGATCACGAGCAAAAGGTTTGCAAGCTTAAAAGATCCATTTATGGGTTGAAGCAAGCATCTCGATCCTAGAATATAAGGTTTGGTACTGCGATCAAATCTTATGGCTTTAAACAGAATGTTGACGAACCTTGTGTTTACAAGAAGATAGTCAACTCTACAGTAGTTTTCTTGGTGTTGTACGTTGACGATATCCTACTCATTGGAAATGATGTGGGATTTCTGACTGACATTAAGTATTGGCTAGCGACAGAATTCCAAATGAAAGATTTGGGAGAGGCTCAGTTTGTTCTTGGAATCTAAATTGTTCAGAATCGAAGAACAAAACACTAGCATTGTCTCAGGCATCGTACATCGACAAACTGTTGATTCGATATAAGATGCAGGACTTCAAGAAAGGATTATTACCTTTCAGGCACGGAGTTCATTTGTCAAAGGAACAAAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACACATTCCCTATGCATCAGCAGTCGGTAGTCTGATGTATGTCATGCTATGTACCCGATCCGACATATGCTATGCTGTAGAAATTGTCAGCAGATATCAAGTATCTTAGGAGAACGAGGGACTATATGCTAATGTACGGCACTAAGGATCTGATCCTTACAGGGTACACTGACTAAGATTTTCAGACCGATATAGATTTGAGAAAATCAACATCAGAATNACCTTTCTAAACGACAATCTTAAGGAGAATATCTATATGGCTCAACTAGAAGGGTTCATTGAACAGGATCACGAGCAAAAGGTTTGCAAGCTTAAAAGATCCATTTATGGGTTGAAGCAAGCATCTCGATCCTAGAATATAAGGTTTGGTACTGCGATCAAATCTTATGGCTTTAAACAGAATGTTGACGAACCTTGTGTTTACAAGAAGATAGTCAACTCTACAGTAGTTTTCTTGGTGTTGTACGTTGACGATATCCTACTCATTGGAAATGATGTGGGATTTCTGACTGACATTAAGTATTGGCTAGCGACAGAATTCCAAATGAAAGATTTGGGAGAGGCTCAGTTTGTTCTTGGAATCTAAATTGTTCAGAATCGAAGAACAAAACACTAGCATTGTCTCAGGCATCGTACATCGACAAACTGTTGATTCGATATAAGATGCAGGACTTCAAGAAAGGATTATTACCTTTCAGGCACGGAGTTCATTTGTCAAAGGAACAAAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACACATTCCCTATGCATCAGCAGTCGGTAGTCTGATGTATGTCATGCTATGTACCCGATCCGACATATGCTATGCTGTAGAAATTGTCAGCAGATATCAAGTATCTTAGGAGAACGAGGGACTATATGCTAATGTACGGCACTAAGGATCTGATCCTTACAGGGTACACTGACTAAGATTTTCAGACCGATATAGATTTGAGAAAATCAACATCAGAATTTGTCTTCACTCTGAACAGAGGAGCAATAATATGGAGAAGCATAAAGCAAGGTTGCATTGCTTTATGCTAATGTACGACACTAAGGATAAATATCCTCAAGTATCTTAGGAGAACGAGGGACTATATGCTAATGTACGGCGCTAAGGATCTGATCCTTACAGGGTACACTGACTAAGATTTTCAGACCGATATAGATTTGAGAAAATCAACATCAGAATTTGTCTTCACTCTGAACAGAGGAGCAATAATATGGAGAAGCATAAAGCAAGGTTGCATTGCTTTATGCTAATGTACGACACTAAGGATAAATATCCTCAAGTATCTTAGGAGAACGAGGGACTATATGCTAATGTACGGCGCTAAGGATCTGATCCTTACAGGGTACACTGACTAAGATTTTCAGACCGATATAGATTTGAGAAAATCAACATCAGAATTTGTCTTCACTCTGAACAGAGGAGCAATAATATGGAGAAGCATAAAGCAAGGTTGCATTGTTGATTCCACTATGGAGGCTGAGTATGTTGCTGCTTGTTTAGCAGCGAAAGAATCAGTATGGCTTTGGAAGTTCTTAACTGATGTGAAAGTCATTCCAAATATGCATCTGCCCATCACTCTTTATTGTGATAACAATGTAGCAGTTGCAAATTCTAAAGAACCAAGAAGCCACAAGCGAGGGAAACATATTGAGTGCAAATATCATCTCCTAAGGGAGATTGTGCAACGAGGAGATGTGATCATCACACAGATAGCTTCTGAGAACAACATTGTTGATCCATTTACAAAGCCCCTCACGGCTAAAGTGTTTGAAGGGCACCTAGTGAGTCTAGGACTACGAGTTATGTAATTTAGGGCAAGTGGGAGAAAATGCATGGGTATGTGATGCCATAGTTCATTGTGTTTATGTCTTTCTCTCTACTCAACATTATAAAACCCCACCAGAGTTTTAGTTCAAGTGGGAGTTTGTTGAATTTTATGTCCTAAAACTCATAGTTTGTAAACAAAAACATATTTTATTTTCAATAAAGTTATTATTGATGTTTATTCATTAAAGATTGTTATTGAATAAAGTGATGTTACGATCATTAATCTAAATCCAATAAACTAAGAAAACTTTGACTATAGTATGATTACTTGAACTATATGTAGAGACATAAGAGTGGATCAAGTTCAAGTATATAGTCAAAATGATCGGTAGTACAGGGATAAGGTTAAGTACCTTATTCTGGGGACACTATGGATGCGGCCCAGTTTTGTATATGATATAAACAATGTGATCACTAAATTGTATATGTGGAGGCATGTGAGTGGGGGCGTTCTATGCAATGAGTATTGCAGAAGATCGGACCATGAAGAAAACCACTCTCACTTTATCATGTCATTTACTGTTGAGACTGATTTTTGCATTCGATGACCTAGGTAACTCCATCTTAATCCTGAGCTAACTATGAACTGCTATTTATCCGAAATTATCCTTAGATTTGCATGGGTGAGAGTGGCCCAAGTTTGCAGACTCAATAAGACTCCCATTTCAGAGGTAAGACTGGGTGAATAGCTGGGGACATAGGGTGTAAGATGGNTGTTACGATCATTAATCTAAATCCAATAAACTAAGAAAACTTTGACTATAGTATGATTACTTGAACTATATGTAGAGACATAAGAGTGGATCAAGTTCAAGTATATAGTCAAAATGATCGGTAGTACAGGGATAAGGTTAAGTACCTTATTCTGGGGACACTATGGATGCGGCCCAGTTTTGTATATGATATAAACAATGTGATCACTAAATTGTATATGTGGAGGCATGTGAGTGGGGGCGTTCTATGCAATGAGTATTGCAGAAGATCGGACCATGAAGAAAACCACTCTCACTTTATCATGTCATTTACTGTTGAGACTGATTTTTGCATTCGATGACCTAGGTAACTCCATCTTAATCCTGAGCTAACTATGAACTGCTATTTATCCGAAATTATCCTTAGATTTGCATGGGTGAGAGTGGCCCAAGTTTGCAGACTCAATAAGACTCCCATTTCAGAGGTAAGACTGGGTGAATAGCTGGGGACATAGGGTGTAAGATGGAATTCACTCCTACCCGCTTTTATGGATAGTAGAGAAGTTGTTCCCTTAAATACTGACTCCAAGTCTTGAACTAGGGGCCCCACCCTCTCATTGGCCTGAGAGGGATTCGATTTGGTGGTTGGACCATAAACCAATTGTTGAGGATTAGTGGGACTTAAGGAACAAAAAATAACTTTAGGGGTAAAACATTAAATTGACCCAACTCTAGTTACGAACAACCTGTGAAGGATTNGCATGTGAGTGGGGGCGTTCTATGCAATGAGTATTGCAGAAGATCGGACCATGAAGAAAACCACTCTCACTTTATCATGTCATTTACTGTTGAGACTGATTTTTGCATTCGATGACCTAGGTAACTCCATCTTAATCCTGAGCTAACTATGAACTGCTATTTATCCGAAATTATCCTTAGATTTGCATGGGTGAGAGTGGCCCAAGTTTGCAGACTCAATAAGACTCCCATTTCAGAGGTAAGACTGGGTGAATAGCTGGGGACATAGGGTGTAAGATGGAATTCACTCCTACCCGCTTTTATGGATAGTAGAGAAGTTGTTCCCTTAAATACTGACTCCAAGTCTTGAACTAGGGGCCCCACCCTCTCATTGGCCTGAGAGGGATTCGATTTGGTGGTTGGACCATAAACCAATTGTTGAGGATTAGTGGGACTTAAGGAACAAAAAATAACTTTAGGGGTAAAACATTAAATTGACCCAACTCTAGTTACGAACAACCTGTGAAGGATTGACTTACTAATCATGGTTATATCAAATGGACAGAAATATATTTATAGTGAGGGGAGTGCAACTACTAGGCTATAGTGGAGTGTCCTAGTAGTTAACGAATGTTGGTTAACAAGGTTAATGAGTTTAGCCGATTAATCTCGGATCGTTGGAGTCCATGATCTGTAGGTCCATTAGGTCCCTCTGCTAGCTCATATCGGACTAAACCTTAGAACAGTATGACAAGTGAGTTTGAAGTGTTCGAATTCAAATTAGGGAATACACTCTAAATATATACGATATATTTAACCACATTTTGTTTTAATTATGAATTGAACAAAAAGAGAGAATTAAATATATTTAAATAAGATTTAAATATTTTAATTCTTAACCGTGATTCATAATCAATATGTGCAAAAATTGGTTGGGTTAAATATTAATTAAATTGTTTAATTAATAATTTAATATTATTTTGATTTGAAATTAATTGTTGAATTAAAATAAAGAAAGTCAAAATGTTGCCTTCACCTAATGGAAAAATTCATGTCTCAGTTAGTGGAAATGTCAATATATGGTTTAACCAAACTTGCATGTTTGCTACATAATCTCAAAATTTTGGGTGGAATTTTGAGTGTCAAAATTTGGTTTGAGTGAAATTTTGAATGTCAATATTTGGTTAACTCAAACTTGCCCACATAATCCCACAAATTTGAGTTGAATTTTGAGTGTCAAAATTTGGTAATCTCAAATTTGCATCAACATGCAAATATGACTCTATAAATTGAGTGATCAAGGTACATGGAAATTCTTCTCGAAAAACTTTGAGAAAATATATCAAAACTCTCTCTTTACGTATACTAAATTCCTATCAAGTTTCATCACTCACCGGATTCCACAATCCCGTTCTAAGGCCGGAGAATAGTAAGGAAGACACTAGTGGTGGTTCGAAACTGTTCGTGAGGAAAAAGAAATTTGAATTAGAAAAGGTTAGTATTCAAACTCATTGAATTTTAATTTTTTTGAACATGCTAGTAATTTACTATAATTGATGTATTTAGAGTGCCTAAGATCCAAATTGCTTCTGCACGTGTTATAGTAACACCATCATATTTATGTATAGAAATGATTACGCCATGATGACGGCGACGACTCTAGGCAAGTAGAAATTTAGAGTCGTTACATCTGTTTTCCTCCAGACGTCGTTACGGAAAGCTAGCTCGACTATGAGGGGTCCAGGGGGTGTGAACCTCCTAGGGATCCACACTCACACGTGTGAGTTGTTTGTAGGCAAGTACTACACATCCAAGTTTGCCTTGACTGGAGGGCACCCCTATGATGGTTTTAATAATAGGTCCTTAATCATGAGTGACATGTATTTGCTTTTCTCAAACTCATAAGTGAGGTCACTTATAGAGTATTTCTTAAAATACTCAAATCATGTGCTTGTTCTATTTCAAGTAAAGCCAAGGAACTCTTGTACGGCTGATGACAGCATCACAAGCTGATACTATGACACATACATAGGATAAGTATATTTATTTTCTTAGACTTATGTTAGAATAGGGTGTTTTTATCATGTTTATTTGTTTTGTTTTGAAATTTATTATGCTCTTTAAAGATATTTTCGAATACGTAAATCTATGACAGTGTTTTATCTTGAAGTTTTAATTGATTATTTCTTCACAAATTAGTCTGTTATATATACGGTAGCGACTTTAGACTATAAAAATCTAGAGCCGTTGCATTAAAACAGCGAGAGTGTTATCTCTTAAAAAAAAAATGAAACAAATTGCACTATGCCATTGAAATAAGAGAATATGTGATGTCTAAAAACTTTTAGCAAAATCTTAGAATTGCCAAGAATAGGGTGCGACATGTATTGCCCAAGAAACTTTGAAATCTACCCAACTTTATTAAAGATATAGATTTCCATAAAGATTTATGTGAGGAAACTTCTATAATCTATTTATTTTCGACATTATTTTTAAGTATTTTATTTCTTTATAAAAATCACGAGTGACGTTTGACATTTTTTTCTTCATTAAAGTTTAAAAGAGAATAAAGGTAAAAAAAATATTTGTTTAACTAAATAATTAATCTTATTGTTTGACTAAATGGTAAATTAAAGTGATTTTTTATTTTTTTTTTCTTTTTAAAATTATGAGTATTAACTAAACGTTTGAAAGTTGAATTGNATTATTAGTATTAAGTTATAACGGTCTTGAAATCACTATTTCAAATCTTATTTAAAGGTAATAAAATCTAGTTAGAGAAAAAGAATCTTCTATTCTTTTTTTCATATGAAACACGTTCTCTACTTCATGTGTAAAGCAATATTTTAAAATATTTTAACAATAATATTTTTTAGTAATATTTTTCCTTGATTCAATGCATCTGAAAGAGGAATAGAGGAATAAGGCAGTAAAAGCAAACCAAGTTTGATTAGTATAAAAGACTAAATATAGGATTGAGGTTTGTTCATCTTCAAACTTTCCTTACAAACAAATATAGCATTGGCATAGAAATGTTTATCCCCAAACTGCAAGCTTCCATGGCTAAGTATGAAGCAAGCGAGATGATCAAGAAGAATACTAGAAATGGTGATAATGTTCAACTAAAAGCTTTTAATGGCATTGCTCGAGCTTCAACCCAAGTCAACAATCAAGGCATGGTACCAGAAATTCTTAGAGATAACAAAAATGTCGGGCCCAAGTTTAGTTCAAATACTCATCTAAAAGCATCAAATATGCAATTTAGTCGAGAGAAGATGAAGGAGATCTTTAGATATCATGATAGTGATAAAGATGGTTTTCTCAATATAAGAGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTATTCCATTTGAGAAAGCTTCCTATGGCATGACATATGCTGATGCAAATAAAGATGGCCTTATTAGCGAGGCTGAACTTGACAAACTCGTTGATTATGCCCAAAAGTTTATGAAGAAGAAA

mRNA sequence

CATTGGTATAACAATGTTTATCCCCAAACTTCAAGCTTCCACGGCTAAGTATGAAGCAAGTGAGATGATCAAAAAGTGTACTAGAAATGGTGATAATGTTCAACTAAAAGCTTTTAGTGGCATTGCTCGAGCTTCAACTCAAGTCAACAATCAAGGTATGGTATCGGAAATCTTTAGAGATAATAAGAATGTCGGGCCCAAGCTTAGTTCAAATACTCAACTAAAGGCATCTACTATGCAATTTAGTCGAGAGCAGATGAAGAAGATTTTTAAATATCATGATAGCGATAAGGATGGTTTTCTCAACCTAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTATTCCATTTGAGAAAGCTTCCTATGGCATGTCATATGCTGATGCAGATAAAGATGGCCTTATTAAAATGTTTATCCCCAAACTGCAAGCTTCCATGGCTAAGTATGAAGCAAGCGAGATGATCAAGAAGAATACTAGAAATGGTGATAATGTTCAACTAAAAGCTTTTAATGGCATTGCTCGAGCTTCAACCCAAGTCAACAATCAAGGCATGGTACCAGAAATTCTTAGAGATAACAAAAATGTCGGGCCCAAGTTTAGTTCAAATACTCATCTAAAAGCATCAAATATGCAATTTAGTCGAGAGAAGATGAAGGAGATCTTTAGATATCATGATAGTGATAAAGATGGTTTTCTCAATATAAGAGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTATTCCATTTGAGAAAGCTTCCTATGGCATGACATATGCTGATGCAAATAAAGATGGCCTTATTAGCGAGGCTGAACTTGACAAACTCGTTGATTATGCCCAAAAGTTTATGAAGAAGAAA

Coding sequence (CDS)

ATGTTTATCCCCAAACTTCAAGCTTCCACGGCTAAGTATGAAGCAAGTGAGATGATCAAAAAGTGTACTAGAAATGGTGATAATGTTCAACTAAAAGCTTTTAGTGGCATTGCTCGAGCTTCAACTCAAGTCAACAATCAAGGTATGGTATCGGAAATCTTTAGAGATAATAAGAATGTCGGGCCCAAGCTTAGTTCAAATACTCAACTAAAGGCATCTACTATGCAATTTAGTCGAGAGCAGATGAAGAAGATTTTTAAATATCATGATAGCGATAAGGATGGTTTTCTCAACCTAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTATTCCATTTGAGAAAGCTTCCTATGGCATGTCATATGCTGATGCAGATAAAGATGGCCTTATTAAAATGTTTATCCCCAAACTGCAAGCTTCCATGGCTAAGTATGAAGCAAGCGAGATGATCAAGAAGAATACTAGAAATGGTGATAATGTTCAACTAAAAGCTTTTAATGGCATTGCTCGAGCTTCAACCCAAGTCAACAATCAAGGCATGGTACCAGAAATTCTTAGAGATAACAAAAATGTCGGGCCCAAGTTTAGTTCAAATACTCATCTAAAAGCATCAAATATGCAATTTAGTCGAGAGAAGATGAAGGAGATCTTTAGATATCATGATAGTGATAAAGATGGTTTTCTCAATATAAGAGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTATTCCATTTGAGAAAGCTTCCTATGGCATGACATATGCTGATGCAAATAAAGATGGCCTTATTAGCGAGGCTGAACTTGACAAACTCGTTGATTATGCCCAAAAGTTTATGAAGAAGAAA

Protein sequence

MFIPKLQASTAKYEASEMIKKCTRNGDNVQLKAFSGIARASTQVNNQGMVSEIFRDNKNVGPKLSSNTQLKASTMQFSREQMKKIFKYHDSDKDGFLNLRELTKAFAFLGSIIPFEKASYGMSYADADKDGLIKMFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQVNNQGMVPEILRDNKNVGPKFSSNTHLKASNMQFSREKMKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLVDYAQKFMKKK

Homology

[Close]

BLAST of Cp4.1LG01g17010 vs. NCBI nr
Match: XP_023530739.1 (calmodulin-2/4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297 bits (761), Expect = 3.22e-99
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 135 MFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQVNNQGMVPEILRDNKNV 194
           MFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQVNNQGMVPEILRDNKNV
Sbjct: 1   MFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQVNNQGMVPEILRDNKNV 60

Query: 195 GPKFSSNTHLKASNMQFSREKMKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY 254
           GPKFSSNTHLKASNMQFSREKMKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY
Sbjct: 61  GPKFSSNTHLKASNMQFSREKMKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY 120

Query: 255 GMTYADANKDGLISEAELDKLVDYAQKFMKKK 286
           GMTYADANKDGLISEAELDKLVDYAQKFMKKK
Sbjct: 121 GMTYADANKDGLISEAELDKLVDYAQKFMKKK 152

[Close]

BLAST of Cp4.1LG01g17010 vs. NCBI nr
Match: XP_022930012.1 (calmodulin-2/4-like [Cucurbita moschata])

HSP 1 Score: 290 bits (742), Expect = 2.49e-96
Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 135 MFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQVNNQGMVPEILRDNKNV 194
           MFIPKLQASMAKYEASEMIKK+TRNGDNVQLKAFNGIARASTQVNNQ MVPEILRDNKNV
Sbjct: 1   MFIPKLQASMAKYEASEMIKKSTRNGDNVQLKAFNGIARASTQVNNQSMVPEILRDNKNV 60

Query: 195 GPKFSSNTHLKASNMQFSREKMKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY 254
           GPKFSSNTHLKASNMQFSRE+MKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY
Sbjct: 61  GPKFSSNTHLKASNMQFSREQMKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY 120

Query: 255 GMTYADANKDGLISEAELDKLVDYAQKFMKKK 286
           GMTYADANKDGLISEAELDKLVDYAQKF+KKK
Sbjct: 121 GMTYADANKDGLISEAELDKLVDYAQKFIKKK 152

[Close]

BLAST of Cp4.1LG01g17010 vs. NCBI nr
Match: XP_022930019.1 (calcium-binding protein CML38-like [Cucurbita moschata])

HSP 1 Score: 275 bits (704), Expect = 1.49e-90
Identity = 139/152 (91.45%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 135 MFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQVNNQGMVPEILRDNKNV 194
           MFIPKLQASMAKYEASEMIKK TRNGDNVQLKAF+GIARASTQVNNQGMVPEI RDNKNV
Sbjct: 1   MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNV 60

Query: 195 GPKFSSNTHLKASNMQFSREKMKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY 254
           GPK SSNT LKASNMQFSRE +KEIF+YHDSDKDGFLN+RELTKAFAFLGSIIPFEK SY
Sbjct: 61  GPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLRELTKAFAFLGSIIPFEKGSY 120

Query: 255 GMTYADANKDGLISEAELDKLVDYAQKFMKKK 286
           GMTYADA+KDGLISE ELDKL+DYAQKFMKKK
Sbjct: 121 GMTYADADKDGLISEVELDKLIDYAQKFMKKK 152

[Close]

BLAST of Cp4.1LG01g17010 vs. NCBI nr
Match: XP_023530761.1 (calmodulin-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 259 bits (663), Expect = 1.47e-84
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MFIPKLQASTAKYEASEMIKKCTRNGDNVQLKAFSGIARASTQVNNQGMVSEIFRDNKNV 60
           MFIPKLQASTAKYEASEMIKKCTRNGDNVQLKAFSGIARASTQVNNQGMVSEIFRDNKNV
Sbjct: 1   MFIPKLQASTAKYEASEMIKKCTRNGDNVQLKAFSGIARASTQVNNQGMVSEIFRDNKNV 60

Query: 61  GPKLSSNTQLKASTMQFSREQMKKIFKYHDSDKDGFLNLRELTKAFAFLGSIIPFEKASY 120
           GPKLSSNTQLKASTMQFSREQMKKIFKYHDSDKDGFLNLRELTKAFAFLGSIIPFEKASY
Sbjct: 61  GPKLSSNTQLKASTMQFSREQMKKIFKYHDSDKDGFLNLRELTKAFAFLGSIIPFEKASY 120

Query: 121 GMSYADADKDGLI 133
           GMSYADADKDGLI
Sbjct: 121 GMSYADADKDGLI 133

[Close]

BLAST of Cp4.1LG01g17010 vs. NCBI nr
Match: XP_023530717.1 (calmodulin-2/4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255 bits (652), Expect = 1.18e-82
Identity = 129/152 (84.87%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 135 MFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQVNNQGMVPEILRDNKNV 194
           MFI KLQASMAKYEASE+IKK  RNGD+VQLK+F+GIAR STQ+NNQG +PEIL+DNKNV
Sbjct: 1   MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSGIARDSTQLNNQGKIPEILKDNKNV 60

Query: 195 GPKFSSNTHLKASNMQFSREKMKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY 254
           G K SSN H K S +QFSRE+MKEIFRYHDSDKDGFLN+RELTKAFAFLGSIIPFEKASY
Sbjct: 61  GLKLSSNAHPKTSKLQFSREQMKEIFRYHDSDKDGFLNLRELTKAFAFLGSIIPFEKASY 120

Query: 255 GMTYADANKDGLISEAELDKLVDYAQKFMKKK 286
           GMTYADANKDGLISEAELDKL+DYAQKF+KKK
Sbjct: 121 GMTYADANKDGLISEAELDKLIDYAQKFVKKK 152

[Close]

BLAST of Cp4.1LG01g17010 vs. ExPASy TrEMBL
Match: A0A6J1EP72 (calmodulin-2/4-like OS=Cucurbita moschata OX=3662 GN=LOC111436455 PE=4 SV=1)

HSP 1 Score: 290 bits (742), Expect = 1.21e-96
Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 135 MFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQVNNQGMVPEILRDNKNV 194
           MFIPKLQASMAKYEASEMIKK+TRNGDNVQLKAFNGIARASTQVNNQ MVPEILRDNKNV
Sbjct: 1   MFIPKLQASMAKYEASEMIKKSTRNGDNVQLKAFNGIARASTQVNNQSMVPEILRDNKNV 60

Query: 195 GPKFSSNTHLKASNMQFSREKMKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY 254
           GPKFSSNTHLKASNMQFSRE+MKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY
Sbjct: 61  GPKFSSNTHLKASNMQFSREQMKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY 120

Query: 255 GMTYADANKDGLISEAELDKLVDYAQKFMKKK 286
           GMTYADANKDGLISEAELDKLVDYAQKF+KKK
Sbjct: 121 GMTYADANKDGLISEAELDKLVDYAQKFIKKK 152

[Close]

BLAST of Cp4.1LG01g17010 vs. ExPASy TrEMBL
Match: A0A6J1EQF3 (calcium-binding protein CML38-like OS=Cucurbita moschata OX=3662 GN=LOC111436460 PE=4 SV=1)

HSP 1 Score: 275 bits (704), Expect = 7.21e-91
Identity = 139/152 (91.45%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 135 MFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQVNNQGMVPEILRDNKNV 194
           MFIPKLQASMAKYEASEMIKK TRNGDNVQLKAF+GIARASTQVNNQGMVPEI RDNKNV
Sbjct: 1   MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNV 60

Query: 195 GPKFSSNTHLKASNMQFSREKMKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY 254
           GPK SSNT LKASNMQFSRE +KEIF+YHDSDKDGFLN+RELTKAFAFLGSIIPFEK SY
Sbjct: 61  GPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLRELTKAFAFLGSIIPFEKGSY 120

Query: 255 GMTYADANKDGLISEAELDKLVDYAQKFMKKK 286
           GMTYADA+KDGLISE ELDKL+DYAQKFMKKK
Sbjct: 121 GMTYADADKDGLISEVELDKLIDYAQKFMKKK 152

[Close]

BLAST of Cp4.1LG01g17010 vs. ExPASy TrEMBL
Match: A0A6J1JZF1 (calmodulin-2/4-like OS=Cucurbita maxima OX=3661 GN=LOC111490224 PE=4 SV=1)

HSP 1 Score: 252 bits (644), Expect = 9.35e-82
Identity = 129/152 (84.87%), Postives = 138/152 (90.79%), Query Frame = 0


Query: 135 MFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQVNNQGMVPEILRDNKNV 194
           MFI KLQASMAKYEASEMIKK  RNGD+VQLK+F GI R STQVNNQG + EIL+DNKNV
Sbjct: 1   MFISKLQASMAKYEASEMIKKYPRNGDDVQLKSFGGITRDSTQVNNQGKISEILKDNKNV 60

Query: 195 GPKFSSNTHLKASNMQFSREKMKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY 254
           G K SSNTH K S +QFSRE+MKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY
Sbjct: 61  GLKLSSNTHPKTSKLQFSREQMKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY 120

Query: 255 GMTYADANKDGLISEAELDKLVDYAQKFMKKK 286
           GM+YADANKDGLI EAELDKL+DYAQKF+KKK
Sbjct: 121 GMSYADANKDGLIGEAELDKLIDYAQKFVKKK 152

[Close]

BLAST of Cp4.1LG01g17010 vs. ExPASy TrEMBL
Match: A0A6J1EP67 (uncharacterized protein LOC111436449 OS=Cucurbita moschata OX=3662 GN=LOC111436449 PE=4 SV=1)

HSP 1 Score: 250 bits (638), Expect = 7.62e-81
Identity = 126/152 (82.89%), Postives = 140/152 (92.11%), Query Frame = 0


Query: 135 MFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQVNNQGMVPEILRDNKNV 194
           MFI KLQASMAKYEASE+IKK  RNGD+VQLK+F+ IAR STQ+NNQG +PEIL+DNKNV
Sbjct: 1   MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNV 60

Query: 195 GPKFSSNTHLKASNMQFSREKMKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY 254
           G K SSN H K S +QFSRE+MKEIF+YHDSDKDGFLN+RELTKAFAFLGSIIPFEKASY
Sbjct: 61  GLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGSIIPFEKASY 120

Query: 255 GMTYADANKDGLISEAELDKLVDYAQKFMKKK 286
           GM+YADANKDGLISEAELDKL+DYAQKF+KKK
Sbjct: 121 GMSYADANKDGLISEAELDKLIDYAQKFVKKK 152

[Close]

BLAST of Cp4.1LG01g17010 vs. ExPASy TrEMBL
Match: A0A6J1EQE8 (calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111436456 PE=4 SV=1)

HSP 1 Score: 249 bits (635), Expect = 2.17e-80
Identity = 125/152 (82.24%), Postives = 137/152 (90.13%), Query Frame = 0


Query: 135 MFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQVNNQGMVPEILRDNKNV 194
           MFI KLQASMAKYEASE+IKK  RNGD VQLK+F GI R STQ+NNQG +PEIL+DNKNV
Sbjct: 1   MFISKLQASMAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNV 60

Query: 195 GPKFSSNTHLKASNMQFSREKMKEIFRYHDSDKDGFLNIRELTKAFAFLGSIIPFEKASY 254
           G K SSNTH K   +QF+RE+MKEIFRYHDSDKDGFLN+RELTKAFAFLGSIIPFEKASY
Sbjct: 61  GLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFLGSIIPFEKASY 120

Query: 255 GMTYADANKDGLISEAELDKLVDYAQKFMKKK 286
           GM+YADANKDGLISE ELDKL+DYAQKF+KKK
Sbjct: 121 GMSYADANKDGLISETELDKLIDYAQKFVKKK 152

[Close]

BLAST of Cp4.1LG01g17010 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 )

HSP 1 Score: 45.1 bits (105), Expect = 1.1e-04
Identity = 22/70 (31.43%), Postives = 38/70 (54.29%), Query Frame = 0


Query: 62  PKLSSNTQLKASTMQFSREQMKKIFKYHDSDKDGFLNLRELTKAFAFLGSIIPFEKASYG 121
           P+ +S+      + Q S+E+++++F + DSD DG ++  EL   F  +G  I  E A   
Sbjct: 45  PRSNSDDNNNIKSHQASKEELRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEA 104

Query: 122 MSYADADKDG 132
           ++  D D DG
Sbjct: 105 INEVDTDADG 114

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17010 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g17010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023530739.1	3.22e-99	100.00	calmodulin-2/4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022930012.1	2.49e-96	97.37	calmodulin-2/4-like [Cucurbita moschata]	[more]
XP_022930019.1	1.49e-90	91.45	calcium-binding protein CML38-like [Cucurbita moschata]	[more]
XP_023530761.1	1.47e-84	100.00	calmodulin-like protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_023530717.1	1.18e-82	84.87	calmodulin-2/4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG01g17010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EP72	1.21e-96	97.37	calmodulin-2/4-like OS=Cucurbita moschata OX=3662 GN=LOC111436455 PE=4 SV=1	[more]
A0A6J1EQF3	7.21e-91	91.45	calcium-binding protein CML38-like OS=Cucurbita moschata OX=3662 GN=LOC111436460...	[more]
A0A6J1JZF1	9.35e-82	84.87	calmodulin-2/4-like OS=Cucurbita maxima OX=3661 GN=LOC111490224 PE=4 SV=1	[more]
A0A6J1EP67	7.62e-81	82.89	uncharacterized protein LOC111436449 OS=Cucurbita moschata OX=3662 GN=LOC1114364...	[more]
A0A6J1EQE8	2.17e-80	82.24	calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111436456 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g17010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50770.1	1.1e-04	31.43	calmodulin-like 41	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 215..243 e-value: 2.5 score: 14.6 coord: 81..109 e-value: 2.1 score: 15.1
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 213..274 e-value: 2.3E-7 score: 31.1
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 82..108 e-value: 1.8E-5 score: 24.2
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 211..246 score: 12.616518
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 77..112 score: 12.616518
None	No IPR available	GENE3D	1.10.238.10		coord: 141..283 e-value: 9.1E-11 score: 44.0
None	No IPR available	GENE3D	1.10.238.10		coord: 42..137 e-value: 5.6E-9 score: 37.7
None	No IPR available	PANTHER	PTHR23050:SF330	RE52086P	coord: 138..276
None	No IPR available	PANTHER	PTHR23050:SF330	RE52086P	coord: 7..134
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 138..276
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 7..134
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 260..272
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 90..102
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 224..236
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 77..276

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17010.1	Cp4.1LG01g17010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding