Cp4.1LG01g16280 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g16280
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	60S ribosomal protein L3
Location	Cp4.1LG01: 10077044 .. 10081373 (+)
RNA-Seq Expression	Cp4.1LG01g16280
Synteny	Cp4.1LG01g16280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCTCAAGCACGCCGACCACCGTACGACAGTTGGGCTGCTGCTGAGAACCAGAGAAACGAGTTCCTATATATTCGACTGCGACAAGGTAGCGTTGGATTCCAGGGTTACGGTTCATGGATTCTGCTTCCTCCTTATCGCCAGGGAGATCTTCGTTCGTAGTCTTTCCAATTTTCAATGGCCTTTGAGGTGATGAATCGGAACTGAACTCTAGCCTATGCTTCTGGTTCTCCGTCATTGATTTCCGCCGCTCCCGCCAAGATTATGAGAATCGAACACTGATTCCAAAGCTTAAACAATGTAGCAAGTGTTCTCGCGGAAGTTTAAAGGTTGAACTCCGCCATGAGTTGAACAAGTTCCCAAGGTAGACGATGGAGGTTTGCTTCGCTAGGTCGTATTCGCCGTTTTAATTTTCCACATGTCGAATGACAGTTCGACATGTCGTCTCAATGCTCACGTGCTTCTCAGTTATAAACACATGGGCTTGGGCTTCAAATGGGCTCATATTTTATAAGCCCAATACGATTTAAAAGTAGCCCTAGCCCAATTATGTTGCGAGAGAACCCTAATTTCTTCCCTTGTATCACTTAATTCATGCGCCGCACAGCGTAGCAGCCAAATTGTAGCGGCGGCATCCATTATATAGGTCCCCTAAATTGGAAGTAGAAACCTTAACTCGAGTTACGAAGGCACAGCCCTGTTCTTCACCTCTCTATTCCCAGTGTCAGGTATAACAGTTTCGATAAGTATGGTCGCCATTGAATTCACGGTTATATTACTCGATTTACTAAGACTATAGTTTGTTCATTCCATCTCTAACCTCTACTTGCAGGATCTCTTATTTCCCTTTGCAGTATACTTTAATTTGTTTTGTCTCTTTGGATTTGACGTGAAATGGGCTCTGGTGAATCGATCTGTAACTTTACCATTGTAGATTATGTTTTTGATTTATTGTTACTACGACGCTGAAGAAAGTATGTTATCTGGAGGATATTTTTATTGCAACAAATGCATCTGGAGGATTGAAAATCTAAACACAGGCCTTGTATTTCTGGAATTTTGTTTTTTTTATCCCCGACTGTTGTTCCATTCATGTTTTTCCGGTTAAATTCCAATATTCCTAATGACAGTCGAAATGGCTTCCCCATAAAAAACTATGAATAATCAGGGCTGGAGTCTAGAACAGGCTCTTTCTCCAAAGCCAATTTATTGGTTTTTGGGTTGAAACACGGATGAGCCTGAGTTTTGGCATTATCTAGTGCCATAGGCCACTGGTTGGGGTTCATTTTGATGTCTGCAGGATGATGGAACCTGAAACTAGGAAAACATGAACCTGGAACCTGTTTTTCTTGCATCCTTATTTTGAGATTTTAAGATTTTGCATCCTGGTACTTGTTATCCGTATTTTGAGATTTTTTGTTGCACTCTAATTAACGTAAGTTGGTCGACGCAAAACTATCTGTTTTTTCTTCTGTTTATGGTTTTCCTTAATTTTTACGAATGTTCTGTTTTGGCCTATCGTTATCTATTATTTTGTACCATCTAGTTTATATGTTTTTTATTTGAAATGTTATGCTTAATTACCCTTTGAAAGAAGAACCCCTGGAACGTTTGGTCTTTTTGGGATGACGTTAATGGATCTATTAAACATCATTGAAATTTGGTAGTTTCCAATTAATTGCAATAGGAACGCAATATGTCTCACCGCAAGTTTGAGCACCCAAGACATGGCTCTTTGGGATTTCTTCCCAGAAAGAGAGCTTCTCGCCATAGAGGGAAAGGTATTGGTTCTGTGCTAGATCTTATTTTATGACTTATAGTTTTAGATTATTGTATTTGTATAGATCATTCACATTGTTTTTTATTCGGCATGTAACAAGTCAGTTGTCTGTCTTTTAATTTACACTGGTTTGATCGTTCCTAGTGCTTCATTCAGTTGTCTGTCCTTTTTATATTGTAGTCAGCTGAGTATTTTCTTCTTTAATTAGTGCTTCTCACTCTGATCAGATGTAGCTCAGGCATATTGCTGGATGCTTTGTTCTTTCATTGAATCCTTGCATAAGCTTTCCATGTTTCGATTTTAAATGCATGTTTACTTTTTTTTTATAAAAAAAAATTCATGTGATGATATACTGTAAAGCATTACAGCACGCATTGCGTGTACTAAATTCATTTGATATTCATTTGATATTCTTTAGCTCAATGTTGTTATCTGATGGTGACTTGTACTTTGCAGTGAAGGCATTTCCCAGAGATGATCCTTCGAAGCCTTGTAGATTAACTGCTTTCCTTGGATACAAGGCTGGAATGACTCATATTGTCAGAGAAGTTGAAAAGCCTGGATCAAGTGAGTCTGGTTGTAAGATATTTATATCTAGATTATGAAAATGATATAGGAGTATATAGCAATATATCCAACAGGTTCCTAGTTATGGCTGTTTCTCTACGTCACCATTGCGTAGCTTATATTGTGTTGGTCAATCTTGTGTTAGGCCTTCTATTTAGATTAAATTTCCCTTTTGCAATGTGATGTGAAAACTTATGGTAGACAATCCTGTTTTATTTTGTTTCTATTTCTAAAATCTGTTGGATTATTGATTTGTCTTATGATCCTCTCAGAGTTGCACAAGAAAGAAACATGTGAAGCTGTAACAATTATAGAAACTCCCCCTATGGTTGTTGTTGGTGTTGTTGGCTATGTCAAAACGCCACGAGGCTTGCGTTCATTGAAAACTGTATGGGCCCAGCATTTGAGCGAGGAGGTAAAGAGGAGATTTTACAAGAACTGGTGTAAGTCTAAGAAGAAAGCTTTCTCTAAGTACTCAAAGAAGTTTGAGACTGAAGATGGAAAAAAGGATATTCTGGCACAGTTGGAGAAATTGAAGAAATATGGCACTGTGATTCGTGTTCTGGCCCATTCCCAGGTATTTTGCTCTTCCCAAATATTACATGATGAACGACTTGAATATTGTACTTTTCTCCCCTTCCGTTTAATGTTGATCGACCTGAAAATTTGAACCGTTGCAAAATATTGTTAATATTTGATATGTAGTACTATGTTTAAGTACCCACTTTAAGAAGATCGACTTTGTTTCAGATAAGGAAGATGCAAGGACTAAAGCAAAAGAAAGCTCACTTGATGGAAATTCAGGTGAATGGTGGAGATGTTTCTAAGAAGGTTGATTATGCATATAGTTTATTTGAGAAGCAGATCCCTGTTGATGCAATCTTCCAAAAGGATGAGATGATTGATATTATTGGGGTAACTAAAGGAAAAGGTTATGAAGGTGTGGTTACCCGTTGGGGTGTCACTCGTCTCCCCCGCAAGACCCATCGTGGCCTTCGCAAGGTAGCCTGTATTGGTGCTTGGCATCCAGCCAGAGTGTCATTCACTGTTGCTCGAGCTGGGCAGAATGGTTACCATCATCGCACAGAGATGAATAAGAAGGTTTATAAGGTTGGGAAGACTGGCCAAGACTCCCATTCTGCTATGACCGAGTTCGATAGGTTAGTCAACATGTGCCTTCCCTTTTTGGCTTTTACTTATCTTTTCTTGAATTACTGCTACTGATGTTTGTGGATATTTATTCTTATTAGGACTGAGAAGGATATAACTCCAATTGGTGGATTTCCTCACTATGGTGTGGTCAAAGAGGATTACTTGATGATCAAGGGCTGTTGTGTGGGTCCAAAAAAGCGTGTGGTCACATTGAGGCAGTCACTGATTAAGCAGACTTCTAGGGTTGCTATGGAGGAAATCAAACTGAAATTCATCGACACTTCCTCCAAGTTTGGCCATGGACGGTTTCAGACAACACAGGAGAAGGCTAAGTTTTATGGACGAGTCAAGTAGGTGTTGCGTGCGACTGATTTTTTTTTGTCTCGATGATTTGGGTTTCTTCATTTTAAACATGTAACGTTTTCAGACTTGGGAAAGGTGTTGTTTAATGTTATGATGACTATTCATCCTTGGTGTTCAATCTGTTCTTCAATCCTCCAACTAGTCGTCTGGTGGTGTTGCGACTCCGTACTCAGCTGCTTGTTTTGGATCCTGCTCCCTTTTTCTTGACCCAGTTTGTCTTCATTCAACATTTTTGTATACACCACACCCAGTGAGATCAAATAGAAAGCGGCACCAATTTGAACACGTTTCTGTGCTGTTCTAAATTCAAACAGGGTTTCAATATGAACATAAATGAGAAGAACATGGAATATTTGGCGTCCATTCCTTCCATTCTTCTTTTCAATTCAAACAGGGTTTCAATATGAACATAAATGAGAAGAACATGGAATATTTGGCGTCCATTCCTTCCATTCTTCTTTTCATTGAT

mRNA sequence

TACCTCAAGCACGCCGACCACCGTACGACAGTTGGGCTGCTGCTGAGAACCAGAGAAACGAGTTCCTATATATTCGACTGCGACAAGGTAGCGTTGGATTCCAGGGTTACGGTTCATGGATTCTGCTTCCTCCTTATCGCCAGGGAGATCTTCGTTCGTAGTCTTTCCAATTTTCAATGGCCTTTGAGGTGATGAATCGGAACTGAACTCTAGCCTATGCTTCTGGTTCTCCGTCATTGATTTCCGCCGCTCCCGCCAAGATTATGAGAATCGAACACTGATTCCAAAGCTTAAACAATGTAGCAAGTGTTCTCGCGGAAGTTTAAAGGTTGAACTCCGCCATGAGTTGAACAAGTTCCCAAGGTAGACGATGGAGGTTTGCTTCGCTAGGTCGTATTCGCCGTTTTAATTTTCCACATGTCGAATGACAGTTCGACATGTCGTCTCAATGCTCACGTGCTTCTCAGTTATAAACACATGGGCTTGGGCTTCAAATGGGCTCATATTTTATAAGCCCAATACGATTTAAAAGTAGCCCTAGCCCAATTATGTTGCGAGAGAACCCTAATTTCTTCCCTTGTATCACTTAATTCATGCGCCGCACAGCGTAGCAGCCAAATTGTAGCGGCGGCATCCATTATATAGGTCCCCTAAATTGGAAGTAGAAACCTTAACTCGAGTTACGAAGGCACAGCCCTGTTCTTCACCTCTCTATTCCCAGTGTCAGGAACGCAATATGTCTCACCGCAAGTTTGAGCACCCAAGACATGGCTCTTTGGGATTTCTTCCCAGAAAGAGAGCTTCTCGCCATAGAGGGAAAGTGAAGGCATTTCCCAGAGATGATCCTTCGAAGCCTTGTAGATTAACTGCTTTCCTTGGATACAAGGCTGGAATGACTCATATTGTCAGAGAAGTTGAAAAGCCTGGATCAAAGTTGCACAAGAAAGAAACATGTGAAGCTGTAACAATTATAGAAACTCCCCCTATGGTTGTTGTTGGTGTTGTTGGCTATGTCAAAACGCCACGAGGCTTGCGTTCATTGAAAACTGTATGGGCCCAGCATTTGAGCGAGGAGGTAAAGAGGAGATTTTACAAGAACTGGTGTAAGTCTAAGAAGAAAGCTTTCTCTAAGTACTCAAAGAAGTTTGAGACTGAAGATGGAAAAAAGGATATTCTGGCACAGTTGGAGAAATTGAAGAAATATGGCACTGTGATTCGTGTTCTGGCCCATTCCCAGATAAGGAAGATGCAAGGACTAAAGCAAAAGAAAGCTCACTTGATGGAAATTCAGGTGAATGGTGGAGATGTTTCTAAGAAGGTTGATTATGCATATAGTTTATTTGAGAAGCAGATCCCTGTTGATGCAATCTTCCAAAAGGATGAGATGATTGATATTATTGGGGTAACTAAAGGAAAAGGTTATGAAGGTGTGGTTACCCGTTGGGGTGTCACTCGTCTCCCCCGCAAGACCCATCGTGGCCTTCGCAAGGTAGCCTGTATTGGTGCTTGGCATCCAGCCAGAGTGTCATTCACTGTTGCTCGAGCTGGGCAGAATGGTTACCATCATCGCACAGAGATGAATAAGAAGGTTTATAAGGTTGGGAAGACTGGCCAAGACTCCCATTCTGCTATGACCGAGTTCGATAGGACTGAGAAGGATATAACTCCAATTGGTGGATTTCCTCACTATGGTGTGGTCAAAGAGGATTACTTGATGATCAAGGGCTGTTGTGTGGGTCCAAAAAAGCGTGTGGTCACATTGAGGCAGTCACTGATTAAGCAGACTTCTAGGGTTGCTATGGAGGAAATCAAACTGAAATTCATCGACACTTCCTCCAAGTTTGGCCATGGACGGTTTCAGACAACACAGGAGAAGGCTAAGTTTTATGGACGAGTCAAGTAGGTGTTGCGTGCGACTGATTTTTTTTTGTCTCGATGATTTGGGTTTCTTCATTTTAAACATGTAACGTTTTCAGACTTGGGAAAGGTGTTGTTTAATGTTATGATGACTATTCATCCTTGGTGTTCAATCTGTTCTTCAATCCTCCAACTAGTCGTCTGGTGGTGTTGCGACTCCGTACTCAGCTGCTTGTTTTGGATCCTGCTCCCTTTTTCTTGACCCAGTTTGTCTTCATTCAACATTTTTGTATACACCACACCCAGTGAGATCAAATAGAAAGCGGCACCAATTTGAACACGTTTCTGTGCTGTTCTAAATTCAAACAGGGTTTCAATATGAACATAAATGAGAAGAACATGGAATATTTGGCGTCCATTCCTTCCATTCTTCTTTTCAATTCAAACAGGGTTTCAATATGAACATAAATGAGAAGAACATGGAATATTTGGCGTCCATTCCTTCCATTCTTCTTTTCATTGAT

Coding sequence (CDS)

ATGTCTCACCGCAAGTTTGAGCACCCAAGACATGGCTCTTTGGGATTTCTTCCCAGAAAGAGAGCTTCTCGCCATAGAGGGAAAGTGAAGGCATTTCCCAGAGATGATCCTTCGAAGCCTTGTAGATTAACTGCTTTCCTTGGATACAAGGCTGGAATGACTCATATTGTCAGAGAAGTTGAAAAGCCTGGATCAAAGTTGCACAAGAAAGAAACATGTGAAGCTGTAACAATTATAGAAACTCCCCCTATGGTTGTTGTTGGTGTTGTTGGCTATGTCAAAACGCCACGAGGCTTGCGTTCATTGAAAACTGTATGGGCCCAGCATTTGAGCGAGGAGGTAAAGAGGAGATTTTACAAGAACTGGTGTAAGTCTAAGAAGAAAGCTTTCTCTAAGTACTCAAAGAAGTTTGAGACTGAAGATGGAAAAAAGGATATTCTGGCACAGTTGGAGAAATTGAAGAAATATGGCACTGTGATTCGTGTTCTGGCCCATTCCCAGATAAGGAAGATGCAAGGACTAAAGCAAAAGAAAGCTCACTTGATGGAAATTCAGGTGAATGGTGGAGATGTTTCTAAGAAGGTTGATTATGCATATAGTTTATTTGAGAAGCAGATCCCTGTTGATGCAATCTTCCAAAAGGATGAGATGATTGATATTATTGGGGTAACTAAAGGAAAAGGTTATGAAGGTGTGGTTACCCGTTGGGGTGTCACTCGTCTCCCCCGCAAGACCCATCGTGGCCTTCGCAAGGTAGCCTGTATTGGTGCTTGGCATCCAGCCAGAGTGTCATTCACTGTTGCTCGAGCTGGGCAGAATGGTTACCATCATCGCACAGAGATGAATAAGAAGGTTTATAAGGTTGGGAAGACTGGCCAAGACTCCCATTCTGCTATGACCGAGTTCGATAGGACTGAGAAGGATATAACTCCAATTGGTGGATTTCCTCACTATGGTGTGGTCAAAGAGGATTACTTGATGATCAAGGGCTGTTGTGTGGGTCCAAAAAAGCGTGTGGTCACATTGAGGCAGTCACTGATTAAGCAGACTTCTAGGGTTGCTATGGAGGAAATCAAACTGAAATTCATCGACACTTCCTCCAAGTTTGGCCATGGACGGTTTCAGACAACACAGGAGAAGGCTAAGTTTTATGGACGAGTCAAGTAG

Protein sequence

MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYKNWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAHLMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMTEFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKLKFIDTSSKFGHGRFQTTQEKAKFYGRVK

Homology

[Close]

BLAST of Cp4.1LG01g16280 vs. ExPASy Swiss-Prot
Match: P22738 (60S ribosomal protein L3-2 OS=Arabidopsis thaliana OX=3702 GN=ARP2 PE=2 SV=4)

HSP 1 Score: 716.8 bits (1849), Expect = 1.3e-205
Identity = 345/386 (89.38%), Postives = 375/386 (97.15%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDP+KPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSL TVWAQHLSEE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NW KSKKKAF++YSKK ETE+GKKDI +QLEK+KKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           L EIQ+NGGD++KKVDYA SLFEKQ+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY+VGK GQ++HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           E+DRTEKDITP+GGFPHYG+VKEDYLMIKGCCVGPKKRVVTLRQ+L+KQTSR+AMEEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGR 387
           KFID +S  GHGRFQT+QEKAKFYGR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386

[Close]

BLAST of Cp4.1LG01g16280 vs. ExPASy Swiss-Prot
Match: P35684 (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL3 PE=2 SV=2)

HSP 1 Score: 698.0 bits (1800), Expect = 6.2e-200
Identity = 328/388 (84.54%), Postives = 370/388 (95.36%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DD SKPC LT+F+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPP+V+VG+V YVKTPRGLRSL +VWAQHLSEEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAF+KY+ K++++ GKK+I  QLEK+KKY +++RV+AH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQ+NGG ++ KVDY Y  FEK+IPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK+GQ+SH+A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITP+GGFPHYGVVK DYLMIKGCCVGPKKRVVTLRQSL+KQTSR+A+EEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTT EK +F+G++K
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQRFFGKLK 388

[Close]

BLAST of Cp4.1LG01g16280 vs. ExPASy Swiss-Prot
Match: P17094 (60S ribosomal protein L3-1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=1 SV=5)

HSP 1 Score: 689.9 bits (1779), Expect = 1.7e-197
Identity = 325/387 (83.98%), Postives = 368/387 (95.09%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETP MVVVGVV YVKTPRGLRSL TVWAQHLSEEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NW KSKKKAF+ Y+K++++EDGKK I AQLEK+KKY TVIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG +++KVD+AYS FEKQIP++A+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y++GK G ++H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           E+DRTEKD+TP+GGFPHYG+VK+DYLMIKGCCVGPKKRVVTLRQSL+ QTSR+A+EEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of Cp4.1LG01g16280 vs. ExPASy Swiss-Prot
Match: P39023 (60S ribosomal protein L3 OS=Homo sapiens OX=9606 GN=RPL3 PE=1 SV=2)

HSP 1 Score: 551.6 bits (1420), Expect = 7.1e-156
Identity = 269/394 (68.27%), Postives = 331/394 (84.01%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FP+DDPSKP  LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           ++PGSK++KKE  EAVTI+ETPPMVVVG+VGYV+TPRGLR+ KTV+A+H+S+E KRRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NW KSKKKAF+KY KK++ EDGKK +      +KKY  VIRV+AH+Q+R +  L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG V++K+D+A    E+Q+PV+ +F +DEMID+IGVTKGKGY+GV +RW   +
Sbjct: 181 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVG-----KTGQ-D 300
           LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G     K G+  
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 300

Query: 301 SHSAMTEFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVA 360
            ++A T++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+SL+ QT R A
Sbjct: 301 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 360

Query: 361 MEEIKLKFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           +E+I LKFIDT+SKFGHGRFQT +EK  F G +K
Sbjct: 361 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393

[Close]

BLAST of Cp4.1LG01g16280 vs. ExPASy Swiss-Prot
Match: P21531 (60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 547.7 bits (1410), Expect = 1.0e-154
Identity = 266/394 (67.51%), Postives = 330/394 (83.76%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FP+DDPSKP  LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           ++PGSK++KKE  EAVTI+ETPPMVVVG+VGYV+TPRGLR+ KTV+A+H+S+E KRRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NW KSKKKAF+KY KK++ + GKK +      +KKY  VIR++AH+Q+R +  L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG V++K+D+A    E+Q+PV+ +F +DEMID+IGVTKGKGY+GV +RW   +
Sbjct: 181 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVG-----KTGQ-D 300
           LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G     K G+  
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 300

Query: 301 SHSAMTEFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVA 360
            ++A T++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+SL+ QT R A
Sbjct: 301 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 360

Query: 361 MEEIKLKFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           +E+I LKFIDT+SKFGHGRFQT +EK  F G +K
Sbjct: 361 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393

[Close]

BLAST of Cp4.1LG01g16280 vs. NCBI nr
Match: XP_023547361.1 (60S ribosomal protein L3-2 [Cucurbita pepo subsp. pepo] >XP_023547362.1 60S ribosomal protein L3-2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 777 bits (2006), Expect = 2.22e-283
Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]

BLAST of Cp4.1LG01g16280 vs. NCBI nr
Match: KAG6601630.1 (60S ribosomal protein L3-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 776 bits (2003), Expect = 6.37e-283
Identity = 387/388 (99.74%), Postives = 388/388 (100.00%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTE+DITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL
Sbjct: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]

BLAST of Cp4.1LG01g16280 vs. NCBI nr
Match: XP_022957236.1 (60S ribosomal protein L3-2 [Cucurbita moschata])

HSP 1 Score: 775 bits (2001), Expect = 1.28e-282
Identity = 387/388 (99.74%), Postives = 387/388 (99.74%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAFSKYSKKFETEDG KDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKKFETEDGNKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]

BLAST of Cp4.1LG01g16280 vs. NCBI nr
Match: KAG7032391.1 (60S ribosomal protein L3-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 771 bits (1992), Expect = 3.03e-281
Identity = 384/388 (98.97%), Postives = 387/388 (99.74%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTE+DITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQS IKQTSRVAMEEIKL
Sbjct: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]

BLAST of Cp4.1LG01g16280 vs. NCBI nr
Match: XP_022998082.1 (60S ribosomal protein L3-2 [Cucurbita maxima])

HSP 1 Score: 771 bits (1991), Expect = 4.30e-281
Identity = 385/388 (99.23%), Postives = 385/388 (99.23%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAFSKYSKKFETEDGKKDILAQ EKLKKY TVIRVLAHSQIRKMQGLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLR SLIKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]

BLAST of Cp4.1LG01g16280 vs. ExPASy TrEMBL
Match: A0A6J1GYN6 (60S ribosomal protein L3-2 OS=Cucurbita moschata OX=3662 GN=LOC111458684 PE=3 SV=1)

HSP 1 Score: 775 bits (2001), Expect = 6.22e-283
Identity = 387/388 (99.74%), Postives = 387/388 (99.74%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAFSKYSKKFETEDG KDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKKFETEDGNKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]

BLAST of Cp4.1LG01g16280 vs. ExPASy TrEMBL
Match: A0A6J1K6W3 (60S ribosomal protein L3-2 OS=Cucurbita maxima OX=3661 GN=LOC111492834 PE=3 SV=1)

HSP 1 Score: 771 bits (1991), Expect = 2.08e-281
Identity = 385/388 (99.23%), Postives = 385/388 (99.23%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAFSKYSKKFETEDGKKDILAQ EKLKKY TVIRVLAHSQIRKMQGLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLR SLIKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]

BLAST of Cp4.1LG01g16280 vs. ExPASy TrEMBL
Match: A0A5D3CWM8 (60S ribosomal protein L3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002740 PE=3 SV=1)

HSP 1 Score: 752 bits (1941), Expect = 8.70e-274
Identity = 370/388 (95.36%), Postives = 380/388 (97.94%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIE PPMVVVGVVGY+KTPRGLRS KTVWAQHLSEE+KRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYIKTPRGLRSFKTVWAQHLSEELKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWC SKKKAF+KYSKK+ETEDGKKDI +QLE L+K+ TVIRVLAHSQIRKMQGLKQKKAH
Sbjct: 121 NWCMSKKKAFTKYSKKYETEDGKKDIQSQLESLRKHSTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDV KKVDYAYSLFEKQ+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVPKKVDYAYSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQDSHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITPIGGFPHYG+VKEDYLMIKGCC GPKKRVVTLRQSLIKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGIVKEDYLMIKGCCAGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]

BLAST of Cp4.1LG01g16280 vs. ExPASy TrEMBL
Match: A0A1S3BES9 (60S ribosomal protein L3-2 OS=Cucumis melo OX=3656 GN=LOC103488840 PE=3 SV=1)

HSP 1 Score: 752 bits (1941), Expect = 8.70e-274
Identity = 370/388 (95.36%), Postives = 380/388 (97.94%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIE PPMVVVGVVGY+KTPRGLRS KTVWAQHLSEE+KRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYIKTPRGLRSFKTVWAQHLSEELKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWC SKKKAF+KYSKK+ETEDGKKDI +QLE L+K+ TVIRVLAHSQIRKMQGLKQKKAH
Sbjct: 121 NWCMSKKKAFTKYSKKYETEDGKKDIQSQLESLRKHSTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDV KKVDYAYSLFEKQ+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVPKKVDYAYSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQDSHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITPIGGFPHYG+VKEDYLMIKGCC GPKKRVVTLRQSLIKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGIVKEDYLMIKGCCAGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]

BLAST of Cp4.1LG01g16280 vs. ExPASy TrEMBL
Match: A0A6J1DCG6 (60S ribosomal protein L3-2 OS=Momordica charantia OX=3673 GN=LOC111019751 PE=3 SV=1)

HSP 1 Score: 748 bits (1932), Expect = 2.13e-272
Identity = 367/388 (94.59%), Postives = 381/388 (98.20%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPC LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCSLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPM+V+G+VGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMIVIGIVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAF+KYSKK+ETEDGKKDI AQ EKLKKY T IRVLAHSQIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEDGKKDIQAQFEKLKKYSTEIRVLAHSQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEI+VNGGDV KKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIKVNGGDVPKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YK+GKTGQDS+SAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKIGKTGQDSYSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITPIGGFPHYGVVKEDYLM+KGCC GPKKRVVTLRQSLIKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMMKGCCAGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388
           KFIDTSSKFGHGRFQTTQEKA+FYGR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFYGRLK 388

[Close]

BLAST of Cp4.1LG01g16280 vs. TAIR 10
Match: AT1G61580.1 (R-protein L3 B )

HSP 1 Score: 716.8 bits (1849), Expect = 9.1e-207
Identity = 345/386 (89.38%), Postives = 375/386 (97.15%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDP+KPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSL TVWAQHLSEE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NW KSKKKAF++YSKK ETE+GKKDI +QLEK+KKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           L EIQ+NGGD++KKVDYA SLFEKQ+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY+VGK GQ++HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           E+DRTEKDITP+GGFPHYG+VKEDYLMIKGCCVGPKKRVVTLRQ+L+KQTSR+AMEEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGR 387
           KFID +S  GHGRFQT+QEKAKFYGR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386

[Close]

BLAST of Cp4.1LG01g16280 vs. TAIR 10
Match: AT1G43170.1 (ribosomal protein 1 )

HSP 1 Score: 689.9 bits (1779), Expect = 1.2e-198
Identity = 325/387 (83.98%), Postives = 368/387 (95.09%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETP MVVVGVV YVKTPRGLRSL TVWAQHLSEEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NW KSKKKAF+ Y+K++++EDGKK I AQLEK+KKY TVIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG +++KVD+AYS FEKQIP++A+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y++GK G ++H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           E+DRTEKD+TP+GGFPHYG+VK+DYLMIKGCCVGPKKRVVTLRQSL+ QTSR+A+EEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of Cp4.1LG01g16280 vs. TAIR 10
Match: AT1G43170.2 (ribosomal protein 1 )

HSP 1 Score: 689.9 bits (1779), Expect = 1.2e-198
Identity = 325/387 (83.98%), Postives = 368/387 (95.09%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETP MVVVGVV YVKTPRGLRSL TVWAQHLSEEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NW KSKKKAF+ Y+K++++EDGKK I AQLEK+KKY TVIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG +++KVD+AYS FEKQIP++A+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y++GK G ++H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           E+DRTEKD+TP+GGFPHYG+VK+DYLMIKGCCVGPKKRVVTLRQSL+ QTSR+A+EEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of Cp4.1LG01g16280 vs. TAIR 10
Match: AT1G43170.3 (ribosomal protein 1 )

HSP 1 Score: 689.9 bits (1779), Expect = 1.2e-198
Identity = 325/387 (83.98%), Postives = 368/387 (95.09%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETP MVVVGVV YVKTPRGLRSL TVWAQHLSEEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NW KSKKKAF+ Y+K++++EDGKK I AQLEK+KKY TVIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG +++KVD+AYS FEKQIP++A+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y++GK G ++H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           E+DRTEKD+TP+GGFPHYG+VK+DYLMIKGCCVGPKKRVVTLRQSL+ QTSR+A+EEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of Cp4.1LG01g16280 vs. TAIR 10
Match: AT1G43170.5 (ribosomal protein 1 )

HSP 1 Score: 689.9 bits (1779), Expect = 1.2e-198
Identity = 325/387 (83.98%), Postives = 368/387 (95.09%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETP MVVVGVV YVKTPRGLRSL TVWAQHLSEEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NW KSKKKAF+ Y+K++++EDGKK I AQLEK+KKY TVIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG +++KVD+AYS FEKQIP++A+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y++GK G ++H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           E+DRTEKD+TP+GGFPHYG+VK+DYLMIKGCCVGPKKRVVTLRQSL+ QTSR+A+EEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g16280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P22738	1.3e-205	89.38	60S ribosomal protein L3-2 OS=Arabidopsis thaliana OX=3702 GN=ARP2 PE=2 SV=4	[more]
P35684	6.2e-200	84.54	60S ribosomal protein L3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL3 PE=2 S...	[more]
P17094	1.7e-197	83.98	60S ribosomal protein L3-1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=1 SV=5	[more]
P39023	7.1e-156	68.27	60S ribosomal protein L3 OS=Homo sapiens OX=9606 GN=RPL3 PE=1 SV=2	[more]
P21531	1.0e-154	67.51	60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3	[more]

BLAST of Cp4.1LG01g16280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547361.1	2.22e-283	100.00	60S ribosomal protein L3-2 [Cucurbita pepo subsp. pepo] >XP_023547362.1 60S ribo...	[more]
KAG6601630.1	6.37e-283	99.74	60S ribosomal protein L3-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022957236.1	1.28e-282	99.74	60S ribosomal protein L3-2 [Cucurbita moschata]	[more]
KAG7032391.1	3.03e-281	98.97	60S ribosomal protein L3-2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022998082.1	4.30e-281	99.23	60S ribosomal protein L3-2 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG01g16280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYN6	6.22e-283	99.74	60S ribosomal protein L3-2 OS=Cucurbita moschata OX=3662 GN=LOC111458684 PE=3 SV...	[more]
A0A6J1K6W3	2.08e-281	99.23	60S ribosomal protein L3-2 OS=Cucurbita maxima OX=3661 GN=LOC111492834 PE=3 SV=1	[more]
A0A5D3CWM8	8.70e-274	95.36	60S ribosomal protein L3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BES9	8.70e-274	95.36	60S ribosomal protein L3-2 OS=Cucumis melo OX=3656 GN=LOC103488840 PE=3 SV=1	[more]
A0A6J1DCG6	2.13e-272	94.59	60S ribosomal protein L3-2 OS=Momordica charantia OX=3673 GN=LOC111019751 PE=3 S...	[more]

BLAST of Cp4.1LG01g16280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61580.1	9.1e-207	89.38	R-protein L3 B	[more]
AT1G43170.1	1.2e-198	83.98	ribosomal protein 1	[more]
AT1G43170.2	1.2e-198	83.98	ribosomal protein 1	[more]
AT1G43170.3	1.2e-198	83.98	ribosomal protein 1	[more]
AT1G43170.5	1.2e-198	83.98	ribosomal protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 1..370 e-value: 2.4E-190 score: 632.3
IPR044892	Ribosomal protein L3, domain 3, archaeal type superfamily	GENE3D	4.10.960.10	Ribosomal protein L3, domain 3	coord: 1..274 e-value: 2.4E-208 score: 693.6
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 44..385 e-value: 2.4E-208 score: 693.6
None	No IPR available	GENE3D	3.30.1430.10		coord: 83..207 e-value: 2.4E-208 score: 693.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR11363:SF13	60S RIBOSOMAL PROTEIN L3-1	coord: 1..388
IPR045077	Ribosomal protein L3, archaeal/eukaryotic type	PANTHER	PTHR11363	60S RIBOSOMAL PROTEIN L3-RELATED	coord: 1..388
IPR019926	Ribosomal protein L3, conserved site	PROSITE	PS00474	RIBOSOMAL_L3	coord: 212..235
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 4..370

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g16280.1	Cp4.1LG01g16280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome