Cp4.1LG01g15330 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g15330
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	pre-mRNA-processing factor 17-like
Location	Cp4.1LG01: 9157421 .. 9160634 (-)
RNA-Seq Expression	Cp4.1LG01g15330
Synteny	Cp4.1LG01g15330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAATTTGTCTTTTTAAGACATTTGTGAAGTTTCTTTGATTTTCTCTCAAATCGAATTTTGGCATATTGTTTGGGTTCATTTCGATCAGTTTGCCTTGATTTGATCTCATCTTGCAATGCTAAAACCCTAGAGCATGAGGTAAGTGAACATGATCGGGTGGAATCCTCATCTCTTCTTCTGATTCATCTTTTTATTAATCTATTTGTCGGCTAAGGTTCGACCTTTGAATCTCTTCCTTAGCTACAGAAGAGGGGGGAAAAGGTTTGGTTTGGTTTGGGAAGAATTGTGAAACTGAAATAGGGTTTAAAGAAATAGTACTCTTAGATTTTTGTTGGTTCAGTTCCAGGAAGATTCGGTCTGAGCTGTGGAACGGGAAATCAATTCGGTTTCGAGTCGTACAGAGTGTAAATCAGGTTTATGGATCTTCTCCAGTCGTACACAGATCAAAATAATGAAGACGGAAGCCCCGAGCAGGTTGCGTCTTCACCAGAAGCTTCTCCGCCTAGGCTCCTCCCCGCCAAAACCTCGGCGCCCAAGGTTGATGAGACAATGTTAGCCCTCACGGTGGCCAACGCCAACCAGACCCTGTCAAAGCCGATAGACCCAACTCAACATCTCGTTGCCTTCAACCCCACTTACGACCAACTCTGGGCGCCCATTTACGGCCCATCACATCCCTATGCCAAGGATGGCATTGCACAGGGCATGCGAAACCACAAGCTAGGCTTCGTGGAGGATGCGTCCATTGAGCCATTTGTCTTCGATGAACAGTACAACACTTTCCATAAGTATGGATATGCTGCTGACCCATCAGCTTCTGCTGGAAACAATTACATTGGGGACATGGAAGCTTTGCAGAAGAATGATGCCATCTCTGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAAAAGAAAGAAATGAGTGAAAATGAGGATGTGGCAGAGGACTTGAATCTGGCTGAAGTAGATAATCCAGCGAGTGATGTGTGGTTGATGAAGAACAGGAAGAGTCCATGGTCTGGGAAGAAGGAAGGTCTGGAAACCGAGCTGACTGAGGAGCAGAAGAAATATGCAGAAGAGTACGCAAAGAAGAAAGGTGAAGAGAAAGGTTCTGAGAAGGGAGAAGTTACAGCGGACAAGAGTACTTTTCATGGTAAAGAGGAAAGGGACTATCAGGGTAGATCTTGGATTGCACCCCCGAAGGATGCCAAGGCCACAAATGATCATTGCTATATTCCGAAAAGATTGGTGCATACATGGAGCGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGCCATTTGATTCTTTCAGCTGGTATGGATACCAAGGTAAAGATATGGGATGTGTTTAATTCTGGTAAATGTATGAGAACCTACATGGGTCACTCTCAAGCAGTTCGAGATATTTCATTTTGTAATGATGGGTCTAAGTTTTTGACTGCTGGATATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTATGTAGTTAAGCTTAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAAATCGTTCAGTGGGATATGAACACGGGACAGATTACGCAAGAGTACGATCAACATTTAGGAGCGGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACGTCAAGCGATGACAAGTCGCTCCGTGTTTGGGAATTTGGAATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCACTCCATGCCCTCCATTTCTGTACACCCCAATACGAATTGGCTCGCAGCACAGAGTTTAGACAATCAAATTCTTATTTATAGCACCAGGGAGAGATTTCAGCTGAACAAGAAAAAGAGGTTTGCTGGGCACATTGTGGCAGGATATGCTTGTCAGGTTAATTTTTCACCAGATGGGCGTTTTGTTATGTCGGGTGATGGTGAGGGAAAATGCTGGTTTTGGGACTGGAAATCCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGTGTATGCATTGGGTGTGAGTGGCATCCATTGGAGCAAAGTAAAGTAGCAACGTGCGGCTGGGATGGACTGATAAAGTATTGGTTAGTAAATCTCTTTACCTTGGTGTTTTACTTTTTGAAAGTTATCAACTTTTAATAGGCTATGCTAATTCATGTTTACCCTTCAGCATGATACATTTTTTTTTAGATAGTTCTGTAGTGAGGGTCGAATACTCGTTAAATTCGGGTTTCTGCTGACCTATGATGTTCTTGATAACTCTTTGTATGAGATTTTTCGAGTTTCTTGACCTTTAGTATTTGAATGCAACTTTAGCTGTCAGACTTCATTTCTGGTCATTTCTGTTGTTTTTATGAGCTACCTTAGCTGTCATAGGACTTCATTTGAATTAAGCTTTGGAAGGTTTCAATGTTAGCTTTTCTGTTCGTAAATCCATTGCTCCACATTTATTGATGATCTCATATTGATGATCTCGTAAATCCATTGCAAAGGTGGAAGCCTAATGATGGTTCTTCCTTTTGTGGTAATGACCAAATCTCAGATATAATCAACCTAATGGTTTTGCCAATATCTTTTAGATGGTCATCACCATTGTGTTCTTGCCAATTTTTATGCTTTAGCCTATTTCCTTTCTTTCCGACACCTCCTGCCCTTTTGGACGATGTGTTTCTGGATTTTGTTCATTCTGCTAAAATTCGATTCCATGGCACTAAAATTTGTTCTATTATTTCACATTTGTTGGACACTAGCTGGATGGTTTTCTTAGTCAATTTAAGTTGCCAGCCATTGCTATTCATAATCTATTTGTAATGTTTAAACCTGTGTGCACTGTTGTCATGTGGTATTGAGATTGAGATTGGTATTCGGTTCTCATTGTTATGTCGATGACGAACAATCCGACTCATGATTGAATGAGATTTTCGGCTAAAAGTTCACCTTATGGGAATGGAATAGTTGTGGAATCATTTTTCTTTTCTACTCTTGCTGTTCTTTTTATTACAGAAGATCAATATATATATTTTTGGAGTGCAGGGACTAGAGTTGAGCATTTTGGTGTATCAGTGCTGGGATCGACCTCAGAAGCCTCGTACCTGGGAGGTTTGGTGGCCTCGACTTCGTGCACGAAATCTCTGGGTGA

mRNA sequence

AGAGAATTTGTCTTTTTAAGACATTTGTGAAGTTTCTTTGATTTTCTCTCAAATCGAATTTTGGCATATTGTTTGGGTTCATTTCGATCAGTTTGCCTTGATTTGATCTCATCTTGCAATGCTAAAACCCTAGAGCATGAGGTAAGTGAACATGATCGGGTGGAATCCTCATCTCTTCTTCTGATTCATCTTTTTATTAATCTATTTGTCGGCTAAGGTTCGACCTTTGAATCTCTTCCTTAGCTACAGAAGAGGGGGGAAAAGGTTTGGTTTGGTTTGGGAAGAATTGTGAAACTGAAATAGGGTTTAAAGAAATAGTACTCTTAGATTTTTGTTGGTTCAGTTCCAGGAAGATTCGGTCTGAGCTGTGGAACGGGAAATCAATTCGGTTTCGAGTCGTACAGAGTGTAAATCAGGTTTATGGATCTTCTCCAGTCGTACACAGATCAAAATAATGAAGACGGAAGCCCCGAGCAGGTTGCGTCTTCACCAGAAGCTTCTCCGCCTAGGCTCCTCCCCGCCAAAACCTCGGCGCCCAAGGTTGATGAGACAATGTTAGCCCTCACGGTGGCCAACGCCAACCAGACCCTGTCAAAGCCGATAGACCCAACTCAACATCTCGTTGCCTTCAACCCCACTTACGACCAACTCTGGGCGCCCATTTACGGCCCATCACATCCCTATGCCAAGGATGGCATTGCACAGGGCATGCGAAACCACAAGCTAGGCTTCGTGGAGGATGCGTCCATTGAGCCATTTGTCTTCGATGAACAGTACAACACTTTCCATAAGTATGGATATGCTGCTGACCCATCAGCTTCTGCTGGAAACAATTACATTGGGGACATGGAAGCTTTGCAGAAGAATGATGCCATCTCTGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAAAAGAAAGAAATGAGTGAAAATGAGGATGTGGCAGAGGACTTGAATCTGGCTGAAGTAGATAATCCAGCGAGTGATGTGTGGTTGATGAAGAACAGGAAGAGTCCATGGTCTGGGAAGAAGGAAGGTCTGGAAACCGAGCTGACTGAGGAGCAGAAGAAATATGCAGAAGAGTACGCAAAGAAGAAAGGTGAAGAGAAAGGTTCTGAGAAGGGAGAAGTTACAGCGGACAAGAGTACTTTTCATGGTAAAGAGGAAAGGGACTATCAGGGTAGATCTTGGATTGCACCCCCGAAGGATGCCAAGGCCACAAATGATCATTGCTATATTCCGAAAAGATTGGTGCATACATGGAGCGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGCCATTTGATTCTTTCAGCTGGTATGGATACCAAGGTAAAGATATGGGATGTGTTTAATTCTGGTAAATGTATGAGAACCTACATGGGTCACTCTCAAGCAGTTCGAGATATTTCATTTTGTAATGATGGGTCTAAGTTTTTGACTGCTGGATATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTATGTAGTTAAGCTTAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAAATCGTTCAGTGGGATATGAACACGGGACAGATTACGCAAGAGTACGATCAACATTTAGGAGCGGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACGTCAAGCGATGACAAGTCGCTCCGTGTTTGGGAATTTGGAATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCACTCCATGCCCTCCATTTCTGTACACCCCAATACGAATTGGCTCGCAGCACAGAGTTTAGACAATCAAATTCTTATTTATAGCACCAGGGAGAGATTTCAGCTGAACAAGAAAAAGAGGTTTGCTGGGCACATTGTGGCAGGATATGCTTGTCAGGTTAATTTTTCACCAGATGGGCGTTTTGTTATGTCGGGTGATGGTGAGGGAAAATGCTGGTTTTGGGACTGGAAATCCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGTGTATGCATTGGGTGTGAGTGGCATCCATTGGAGCAAAGTAAAGTAGCAACGTGCGGCTGGGATGGACTGATAAAGTATTGTGCTGGGATCGACCTCAGAAGCCTCGTACCTGGGAGGTTTGGTGGCCTCGACTTCGTGCACGAAATCTCTGGGTGA

Coding sequence (CDS)

ATGGATCTTCTCCAGTCGTACACAGATCAAAATAATGAAGACGGAAGCCCCGAGCAGGTTGCGTCTTCACCAGAAGCTTCTCCGCCTAGGCTCCTCCCCGCCAAAACCTCGGCGCCCAAGGTTGATGAGACAATGTTAGCCCTCACGGTGGCCAACGCCAACCAGACCCTGTCAAAGCCGATAGACCCAACTCAACATCTCGTTGCCTTCAACCCCACTTACGACCAACTCTGGGCGCCCATTTACGGCCCATCACATCCCTATGCCAAGGATGGCATTGCACAGGGCATGCGAAACCACAAGCTAGGCTTCGTGGAGGATGCGTCCATTGAGCCATTTGTCTTCGATGAACAGTACAACACTTTCCATAAGTATGGATATGCTGCTGACCCATCAGCTTCTGCTGGAAACAATTACATTGGGGACATGGAAGCTTTGCAGAAGAATGATGCCATCTCTGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAAAAGAAAGAAATGAGTGAAAATGAGGATGTGGCAGAGGACTTGAATCTGGCTGAAGTAGATAATCCAGCGAGTGATGTGTGGTTGATGAAGAACAGGAAGAGTCCATGGTCTGGGAAGAAGGAAGGTCTGGAAACCGAGCTGACTGAGGAGCAGAAGAAATATGCAGAAGAGTACGCAAAGAAGAAAGGTGAAGAGAAAGGTTCTGAGAAGGGAGAAGTTACAGCGGACAAGAGTACTTTTCATGGTAAAGAGGAAAGGGACTATCAGGGTAGATCTTGGATTGCACCCCCGAAGGATGCCAAGGCCACAAATGATCATTGCTATATTCCGAAAAGATTGGTGCATACATGGAGCGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGCCATTTGATTCTTTCAGCTGGTATGGATACCAAGGTAAAGATATGGGATGTGTTTAATTCTGGTAAATGTATGAGAACCTACATGGGTCACTCTCAAGCAGTTCGAGATATTTCATTTTGTAATGATGGGTCTAAGTTTTTGACTGCTGGATATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTATGTAGTTAAGCTTAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAAATCGTTCAGTGGGATATGAACACGGGACAGATTACGCAAGAGTACGATCAACATTTAGGAGCGGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACGTCAAGCGATGACAAGTCGCTCCGTGTTTGGGAATTTGGAATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCACTCCATGCCCTCCATTTCTGTACACCCCAATACGAATTGGCTCGCAGCACAGAGTTTAGACAATCAAATTCTTATTTATAGCACCAGGGAGAGATTTCAGCTGAACAAGAAAAAGAGGTTTGCTGGGCACATTGTGGCAGGATATGCTTGTCAGGTTAATTTTTCACCAGATGGGCGTTTTGTTATGTCGGGTGATGGTGAGGGAAAATGCTGGTTTTGGGACTGGAAATCCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGTGTATGCATTGGGTGTGAGTGGCATCCATTGGAGCAAAGTAAAGTAGCAACGTGCGGCTGGGATGGACTGATAAAGTATTGTGCTGGGATCGACCTCAGAAGCCTCGTACCTGGGAGGTTTGGTGGCCTCGACTTCGTGCACGAAATCTCTGGGTGA

Protein sequence

MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDETMLALTVANANQTLSKPIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVAEDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYCAGIDLRSLVPGRFGGLDFVHEISG

Homology

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BLAST of Cp4.1LG01g15330 vs. ExPASy Swiss-Prot
Match: Q9DC48 (Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 3.7e-151
Identity = 269/531 (50.66%), Postives = 358/531 (67.42%), Query Frame = 0


Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           +DP    V +NPTY+ ++AP +GP +P+    +A   RN   G+ E A I  F+F++Q  
Sbjct: 72  LDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRR 131

Query: 121 TFHKYGYAADPSA---SAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENE 180
           TF  YGYA DPS         YIG +E  +KN  ++V+     E  ++K EK+K+  EN+
Sbjct: 132 TFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVF-----ETGQKKTEKRKKFKEND 191

Query: 181 DVAEDLNLAEVDNPASDVWLMKNRKSPWSG--KKEGLETELTEEQKKYAEEYAK--KKGE 240
                         AS++        PW+    ++ +     EEQK+  E  AK  KKG+
Sbjct: 192 --------------ASNI---DGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGK 251

Query: 241 EKGSEKGEVTADKSTFHGKEERDYQGRSWIAPPKD------AKATNDHCYIPKRLVHTWS 300
           ++  + GE   +K+  H KE  DYQGRS++  P+D      +    + CY+PK+ +H WS
Sbjct: 252 QEEEKPGE---EKTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWS 311

Query: 301 GHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGS 360
           GHTKGVSA+R FP  GHL+LS  MD K+K+W+V+   +C+RT++GHS+AVRDI F   G+
Sbjct: 312 GHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGT 371

Query: 361 KFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM 420
           +FL+A YD+ +K WDTETGQ IS F+  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+
Sbjct: 372 QFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDI 431

Query: 421 NTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 480
            +G+I QEYD+HLGAVNTI FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP
Sbjct: 432 RSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMP 491

Query: 481 SISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMS 540
           ++++ PN  WLA QS+DNQILI+  + RF+LNKKK F GH+VAGYACQV+FSPD  +V+S
Sbjct: 492 AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVIS 551

Query: 541 GDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK 579
           GDG GK   WDWK+ K++   K H+ VCIG  WHP E SKV TCGWDGLIK
Sbjct: 552 GDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIK 576

[Close]

BLAST of Cp4.1LG01g15330 vs. ExPASy Swiss-Prot
Match: O60508 (Pre-mRNA-processing factor 17 OS=Homo sapiens OX=9606 GN=CDC40 PE=1 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 1.1e-150
Identity = 277/566 (48.94%), Postives = 369/566 (65.19%), Query Frame = 0


Query: 26  ASPPRLLPAKTSAPKVDETMLALTVANANQTLSKPIDPTQHLVAFNPTYDQLWAPIYGPS 85
           +S P L  A  SAP+V            +      +DP    V +NPTY+ ++AP +GP 
Sbjct: 45  SSKPSLAVAVDSAPEV--------AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPE 104

Query: 86  HPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSA---SAGNNYIGD 145
           +P+    +A   RN   G+ E A I  F+F++Q  TF  YGYA DPS         YIG 
Sbjct: 105 NPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGS 164

Query: 146 MEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVAEDLNLAEVDNPASDVWLMKNRK 205
           +E  +KN  ++V+     E  ++K EK+K+  EN+              AS++       
Sbjct: 165 VEEAEKNQGLTVF-----ETGQKKTEKRKKFKEND--------------ASNI---DGFL 224

Query: 206 SPWSG--KKEGLETELTEEQKKYAEEYAK--KKGEEKGSEKGEVTADKSTFHGKEERDYQ 265
            PW+    ++ +     EEQK+  E  AK  KKG+++  + GE   +K+  H KE  DYQ
Sbjct: 225 GPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGE---EKTILHVKEMYDYQ 284

Query: 266 GRSWIAPPKD------AKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMD 325
           GRS++  P+D      +    + CY+PK+ +H WSGHTKGVSA+R FP  GHL+LS  MD
Sbjct: 285 GRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMD 344

Query: 326 TKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTF 385
            K+K+W+V+   +C+RT++GHS+AVRDI F   G++FL+A YD+ +K WDTETGQ IS F
Sbjct: 345 CKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRF 404

Query: 386 STGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNN 445
           +  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+ +G+I QEYD+HLGAVNTI FVD N
Sbjct: 405 TNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDEN 464

Query: 446 RRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYST 505
           RRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP++++ PN  WLA QS+DNQILI+  
Sbjct: 465 RRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGA 524

Query: 506 RERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE 565
           + RF+LNKKK F GH+VAGYACQV+FSPD  +V+SGDG GK   WDWK+ K++   K H+
Sbjct: 525 QNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHD 576

Query: 566 GVCIGCEWHPLEQSKVATCGWDGLIK 579
            VCIG  WHP E SKV TCGWDGLIK
Sbjct: 585 KVCIGAVWHPHETSKVITCGWDGLIK 576

[Close]

BLAST of Cp4.1LG01g15330 vs. ExPASy Swiss-Prot
Match: O43071 (Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp17 PE=1 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 2.5e-99
Identity = 217/594 (36.53%), Postives = 310/594 (52.19%), Query Frame = 0


Query: 12  NEDGSPEQVASSPEASPPRLLPAKTSAPKVDETMLALTVANANQTLSKPIDPTQHLVAFN 71
           + D   ++ + SP   P  LL  +  AP V        V N    L          +A N
Sbjct: 7   SSDSEEQENSQSPNIQP--LLHTENLAPAV--------VDNVKDDLIVSKGGNSRELARN 66

Query: 72  PTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADP 131
              +++  P  GP++P+        ++N   G+ E   +  FVF+++        Y A+ 
Sbjct: 67  VPVNEMVQPALGPANPFVTKE-QDSIKNSITGYAEREYVPNFVFNQE--------YYANT 126

Query: 132 SASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVAEDLNLAEVDNP 191
            A  G     D EA    D             KRK +K KE  E+     D ++ E D  
Sbjct: 127 HAIYGKRNFDDNEATTSTDL------------KRKSQKIKERREDPG---DPSILEGDGA 186

Query: 192 ASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKGEV--------- 251
                     K PW+G     ++    E  +Y E  +     EK +E   +         
Sbjct: 187 ---------YKGPWAGYGSE-QSSSPLEYSEYEEVESLDVKSEKDTESNNLGQNELLKEQ 246

Query: 252 --TADKSTFHGKEER--------DYQGRSWIAPPKDA------KATNDHCYIPKRLVHTW 311
             T +  T   KEE         DYQ RS++  P D       +     CYIPK+ + TW
Sbjct: 247 LATPEVETHRSKEETILHKDRLFDYQNRSYMHVPNDVGINLSEEPGEQTCYIPKKHIFTW 306

Query: 312 SGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDG 371
            GHTKG+S +RFFP  GHL+LS  MD ++KIW+V++    +RT+ GH++ +RD+SF  DG
Sbjct: 307 KGHTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDG 366

Query: 372 SKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 431
             FL+  +DK IK WDTE G+ ++ F++ ++   VK   D DK N  LAG +DK+I+Q+D
Sbjct: 367 RSFLSTSFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFD 426

Query: 432 MNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 491
           + +  I Q YD HLG +N+ITF++N +RFVT+SDD S+R WE+G PV IK++++  MHSM
Sbjct: 427 IRSPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPVPIKFVADIAMHSM 486

Query: 492 PSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 551
           P +++ PN   +A QSLDN I +YS  E+++ NKKK F G+  +GY+ +V FSPDGRFV 
Sbjct: 487 PRVALRPNGKSIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYSLEVGFSPDGRFVF 546

Query: 552 SGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG-WDGLIKY 580
           SGD  G   FWDWK+CK+   L  H G      +HP E SKVAT    DG IKY
Sbjct: 547 SGDSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSIVDGSIKY 556

[Close]

BLAST of Cp4.1LG01g15330 vs. ExPASy Swiss-Prot
Match: P40968 (Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CDC40 PE=1 SV=2)

HSP 1 Score: 273.9 bits (699), Expect = 4.5e-72
Identity = 141/436 (32.34%), Postives = 241/436 (55.28%), Query Frame = 0


Query: 165 RKIEKKKEMSENEDVAEDLNLAEVDNPASDVW---LMKNRKS-----PWS--GKKEGLET 224
           + + +KK  + +ED + + +   +    S      L + RK+     PW      +   +
Sbjct: 21  KSVHEKKNGNLHEDTSYEPSSNNIHKRKSHFTKSELKRRRKTRKGDGPWGSWSSSDDETS 80

Query: 225 ELTEEQKKYAEEYAKKKGEEKGSEKGEVTADKSTFHGKEERDYQGRSWIAPPKDA----- 284
           + +E QK+  + +     E+    +     + S F+GK E+DYQGR ++ PP D      
Sbjct: 81  QASETQKEDQDIFVHALAEDNLDSEQIEVEEVSHFYGKSEKDYQGRGYLYPPNDVDVDLR 140

Query: 285 -KATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMR 344
            +  +  CY+PK+++  + GH +G +A++F PK GHLILS G D  +KIWD ++  +C+R
Sbjct: 141 EERISFRCYLPKKVIRNYPGHPEGTTALKFLPKTGHLILSGGNDHTIKIWDFYHDYECLR 200

Query: 345 TYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDD 404
            + GH++ ++ + F  D   FL++ +D+ +K WDTETG+V +       P  V+  P + 
Sbjct: 201 DFQGHNKPIKALRFTEDCQSFLSSSFDRSVKIWDTETGKVKTRLHLNSTPADVESRPTNP 260

Query: 405 KQNILLAGMSDKKIVQWDMNTGQ---ITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLR 464
            +   + G+S+ KI+ +D    +   + Q YD HL ++  + +  +  +F++SS+DK++R
Sbjct: 261 HE--FIVGLSNSKILHYDDRVSENQGLVQTYDHHLSSILALKYFPDGSKFISSSEDKTVR 320

Query: 465 VWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 524
           +WE  I V IK IS+   HSMP ++VHP+ N+  AQS+DN+I  +S + +++ + KK F 
Sbjct: 321 IWENQINVPIKQISDTAQHSMPFLNVHPSQNYFCAQSMDNRIYSFSLKPKYKRHPKKIFK 380

Query: 525 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI-GCEWHPLE 581
           GH  AGY   + FS DGR++ SGD + + + WDW + ++   +K      I   +WHP E
Sbjct: 381 GHSSAGYGISLAFSGDGRYICSGDSKSRLFTWDWNTSRLLNNIKIPGNKPITQVDWHPQE 440

[Close]

BLAST of Cp4.1LG01g15330 vs. ExPASy Swiss-Prot
Match: E9Q349 (WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 9.7e-43
Identity = 93/311 (29.90%), Postives = 164/311 (52.73%), Query Frame = 0


Query: 278 IPKRLVHTWSGHTKGVSAIRFFPK--HGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQ 337
           +PK+++    GH   V++I++ P     H++LSA MD   K+W+  +SG C++TY  HS+
Sbjct: 225 VPKKVLFHLRGHRGPVNSIQWCPVFCKSHMLLSASMDKTFKVWNAVDSGHCLQTYSVHSE 284

Query: 338 AVRDISFCNDGSKFLTAGYDKKIKYWDTETG-QVISTFSTGKIPYVVKLNPDDDKQNILL 397
           AVR   +   G + L+ G+D  +   D ETG QV S  S  ++   +K +P D   N+ L
Sbjct: 285 AVRAARWSPCGRRILSGGFDFALHLTDLETGTQVFSGQSDFRVT-TLKFHPKD--HNVFL 344

Query: 398 AGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVW 457
            G    +I  WDM TG++ + Y   +     I F+     F++S+D       D+++  W
Sbjct: 345 CGGFSSEIKAWDMRTGKVVKGYKATIQQTLDILFLQEGSEFLSSTDASTRDSADRTIIAW 404

Query: 458 EFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 517
           +F     I        ++ PS+++HP      AQ+  N + ++S+   +++++++R+ GH
Sbjct: 405 DFRTAAKISNQIFHERYTCPSLALHPREPVFLAQTNGNYLALFSSVWPYRMSRRRRYEGH 464

Query: 518 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 577
            V GYA     SP G  +++G  +G+   + +++     TL+ H   C+G  +HP+  S 
Sbjct: 465 KVEGYAVGCECSPCGDLLVTGSADGRVLMFSFRTASRACTLQGHTQACLGTTYHPVLPSV 524

Query: 578 VATCGWDGLIK 579
           + TC W G IK
Sbjct: 525 LGTCSWGGDIK 532

[Close]

BLAST of Cp4.1LG01g15330 vs. NCBI nr
Match: KAG6601498.1 (Pre-mRNA-processing factor 17, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1227 bits (3174), Expect = 0.0
Identity = 593/604 (98.18%), Postives = 597/604 (98.84%), Query Frame = 0


Query: 1   MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDETMLALTVANANQTLSKP 60
           MDLLQSYTDQN+EDGSPEQVASSPEASPPRLLPAKTSAPKVD+T+LALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDEDGSPEQVASSPEASPPRLLPAKTSAPKVDDTLLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVA 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDV 
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG
Sbjct: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYCAGIDLRSLVPGRFGGLDFVH 600
           SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYCAGIDL SLVPGRFGGL+F  
Sbjct: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYCAGIDLGSLVPGRFGGLNFAS 600

Query: 601 EISG 604
              G
Sbjct: 601 CKEG 604

[Close]

BLAST of Cp4.1LG01g15330 vs. NCBI nr
Match: XP_023548120.1 (pre-mRNA-processing factor 17-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1197 bits (3096), Expect = 0.0
Identity = 579/579 (100.00%), Postives = 579/579 (100.00%), Query Frame = 0


Query: 1   MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDETMLALTVANANQTLSKP 60
           MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDETMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDETMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVA 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVA
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVA 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG
Sbjct: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579
           SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY
Sbjct: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579

[Close]

BLAST of Cp4.1LG01g15330 vs. NCBI nr
Match: XP_022971003.1 (pre-mRNA-processing factor 17-like [Cucurbita maxima])

HSP 1 Score: 1191 bits (3082), Expect = 0.0
Identity = 575/579 (99.31%), Postives = 578/579 (99.83%), Query Frame = 0


Query: 1   MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDETMLALTVANANQTLSKP 60
           MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVD+TMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVA 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDV 
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG
Sbjct: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWI+PPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWISPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579
           SCKVFRTLKCH+GVCIGCEWHPLEQSKVATCGWDGLIKY
Sbjct: 541 SCKVFRTLKCHDGVCIGCEWHPLEQSKVATCGWDGLIKY 579

[Close]

BLAST of Cp4.1LG01g15330 vs. NCBI nr
Match: KAG7032278.1 (Pre-mRNA-processing factor 17 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1191 bits (3080), Expect = 0.0
Identity = 575/579 (99.31%), Postives = 578/579 (99.83%), Query Frame = 0


Query: 1   MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDETMLALTVANANQTLSKP 60
           MDLLQSYTDQN+EDGSPEQVASSPEASPPRLLPAKTSAPKVD+T+LALTVANANQTLSKP
Sbjct: 4   MDLLQSYTDQNDEDGSPEQVASSPEASPPRLLPAKTSAPKVDDTLLALTVANANQTLSKP 63

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 64  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 123

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVA 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDV 
Sbjct: 124 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 183

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG
Sbjct: 184 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 243

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 244 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 303

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 304 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 363

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 364 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 423

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 424 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 483

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 484 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 543

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579
           SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY
Sbjct: 544 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 582

[Close]

BLAST of Cp4.1LG01g15330 vs. NCBI nr
Match: XP_022956454.1 (pre-mRNA-processing factor 17-like [Cucurbita moschata])

HSP 1 Score: 1191 bits (3080), Expect = 0.0
Identity = 575/579 (99.31%), Postives = 578/579 (99.83%), Query Frame = 0


Query: 1   MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDETMLALTVANANQTLSKP 60
           MDLLQSYTDQN+EDGSPEQVASSPEASPPRLLPAKTSAPKVD+T+LALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDEDGSPEQVASSPEASPPRLLPAKTSAPKVDDTLLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVA 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDV 
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG
Sbjct: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579
           SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY
Sbjct: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579

[Close]

BLAST of Cp4.1LG01g15330 vs. ExPASy TrEMBL
Match: A0A6J1I5J4 (pre-mRNA-processing factor 17-like OS=Cucurbita maxima OX=3661 GN=LOC111469774 PE=4 SV=1)

HSP 1 Score: 1191 bits (3082), Expect = 0.0
Identity = 575/579 (99.31%), Postives = 578/579 (99.83%), Query Frame = 0


Query: 1   MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDETMLALTVANANQTLSKP 60
           MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVD+TMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVA 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDV 
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG
Sbjct: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWI+PPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWISPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579
           SCKVFRTLKCH+GVCIGCEWHPLEQSKVATCGWDGLIKY
Sbjct: 541 SCKVFRTLKCHDGVCIGCEWHPLEQSKVATCGWDGLIKY 579

[Close]

BLAST of Cp4.1LG01g15330 vs. ExPASy TrEMBL
Match: A0A6J1GZ29 (pre-mRNA-processing factor 17-like OS=Cucurbita moschata OX=3662 GN=LOC111458183 PE=4 SV=1)

HSP 1 Score: 1191 bits (3080), Expect = 0.0
Identity = 575/579 (99.31%), Postives = 578/579 (99.83%), Query Frame = 0


Query: 1   MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDETMLALTVANANQTLSKP 60
           MDLLQSYTDQN+EDGSPEQVASSPEASPPRLLPAKTSAPKVD+T+LALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDEDGSPEQVASSPEASPPRLLPAKTSAPKVDDTLLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVA 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDV 
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG
Sbjct: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579
           SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY
Sbjct: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579

[Close]

BLAST of Cp4.1LG01g15330 vs. ExPASy TrEMBL
Match: A0A5D3CVQ9 (Pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00990 PE=4 SV=1)

HSP 1 Score: 1172 bits (3032), Expect = 0.0
Identity = 562/579 (97.06%), Postives = 575/579 (99.31%), Query Frame = 0


Query: 1   MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDETMLALTVANANQTLSKP 60
           MDLLQSYTDQN++DGSP+Q+ SSPEASPPRL+P+KTSAPKVD+TMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVA 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED+ 
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           E++N AEVDNPASDVWLMKNRKSPWSGKKEGL+TELTEEQKKYAEEYAKKKGEEKG EKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579
           +CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579

[Close]

BLAST of Cp4.1LG01g15330 vs. ExPASy TrEMBL
Match: E5GBJ7 (Pre-mRNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 1172 bits (3032), Expect = 0.0
Identity = 562/579 (97.06%), Postives = 575/579 (99.31%), Query Frame = 0


Query: 1   MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDETMLALTVANANQTLSKP 60
           MDLLQSYTDQN++DGSP+Q+ SSPEASPPRL+P+KTSAPKVD+TMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVA 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED+ 
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           E++N AEVDNPASDVWLMKNRKSPWSGKKEGL+TELTEEQKKYAEEYAKKKGEEKG EKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579
           +CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579

[Close]

BLAST of Cp4.1LG01g15330 vs. ExPASy TrEMBL
Match: A0A1S3BE12 (pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489012 PE=4 SV=1)

HSP 1 Score: 1172 bits (3032), Expect = 0.0
Identity = 562/579 (97.06%), Postives = 575/579 (99.31%), Query Frame = 0


Query: 1   MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDETMLALTVANANQTLSKP 60
           MDLLQSYTDQN++DGSP+Q+ SSPEASPPRL+P+KTSAPKVD+TMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVA 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED+ 
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           E++N AEVDNPASDVWLMKNRKSPWSGKKEGL+TELTEEQKKYAEEYAKKKGEEKG EKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579
           +CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579

[Close]

BLAST of Cp4.1LG01g15330 vs. TAIR 10
Match: AT1G10580.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 991.1 bits (2561), Expect = 3.9e-289
Identity = 477/581 (82.10%), Postives = 522/581 (89.85%), Query Frame = 0


Query: 1   MDLLQSYTDQNNEDGSPEQVASSPEASPPRLLPAKTSAPKVDETMLALTVANANQTLSKP 60
           MDL+QSY +++      E VASSPE+SPPR+L AK+SAP+VD+T LALTVAN NQ+ SKP
Sbjct: 1   MDLIQSYEEED------EAVASSPESSPPRMLKAKSSAPEVDDTALALTVANVNQSKSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQH+V +NPT+DQLWAP++GP+HPYAKDGIAQGMRNHKLG VEDASI  F F+EQY+
Sbjct: 61  IDPTQHVVFYNPTHDQLWAPMFGPAHPYAKDGIAQGMRNHKLGSVEDASIGSFGFEEQYH 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVA 180
           TFHK GYAADPS   G NY+GD+EA +KND +SV+NIPQ EQK+RKIE+ KE  E E+  
Sbjct: 121 TFHKCGYAADPS---GMNYVGDVEAFKKNDGLSVFNIPQSEQKRRKIERSKEEREGEEKK 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGE--EKGSE 240
           E++   E +NP ++ WL KNRKSPWS KKE ++ ELTEEQKKYAE++AKKK E  ++G  
Sbjct: 181 EEIE-PEAENPETEAWLRKNRKSPWSRKKEVVQGELTEEQKKYAEDHAKKKEEKGQQGET 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGE  ADKSTFHGKEE+DYQGRSWI  PKDAKA NDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEHYADKSTFHGKEEKDYQGRSWIEAPKDAKANNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360
           FPK GHL+LSAGMD KVKIWDV+NSGKCMRTYMGH++AVRDI F NDGSKFLTAGYDK I
Sbjct: 301 FPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD+NTG++TQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPN NWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWL 480

Query: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 580
           WKSCKVFRTLKCH GVCIG EWHPLEQSKVATCGWDGLIKY
Sbjct: 541 WKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKY 571

[Close]

BLAST of Cp4.1LG01g15330 vs. TAIR 10
Match: AT5G54520.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 207.6 bits (527), Expect = 2.8e-53
Identity = 103/308 (33.44%), Postives = 167/308 (54.22%), Query Frame = 0


Query: 278 IPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVF-NSGKCMRTYMGHSQA 337
           +P R+  + +GHTK V+AI +   H HL+ SAG+D  V +W+V+ N  K +R ++ H+  
Sbjct: 148 MPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAP 207

Query: 338 VRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAG 397
           V+D+ +   G   L+ GYD   + +D E G    +F   ++  VVK +PD+   N+ L+G
Sbjct: 208 VKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDN--CNVFLSG 267

Query: 398 MSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVWEF 457
            S   +  WD+   +   EY + LG +  + F+   ++F++SSD       + ++ VW+ 
Sbjct: 268 GSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDI 327

Query: 458 GIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 517
              V +        ++ P I  HP      AQS  N   I+ST   F+LNK KRF GH V
Sbjct: 328 SREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFEGHWV 387

Query: 518 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVA 577
           AG+  + NFSPDG  + SG  +G  + +D+KS  + + LK +E  C+   +HP+  + VA
Sbjct: 388 AGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVLPNVVA 447

[Close]

BLAST of Cp4.1LG01g15330 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 9.0e-28
Identity = 71/286 (24.83%), Postives = 133/286 (46.50%), Query Frame = 0


Query: 285 TWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFN----SGKCMRTYMGHSQAVRDI 344
           T + H + VS+++ F   G L+ SA  D  ++ + +        + ++ + GH   + D+
Sbjct: 19  TLTSHNRAVSSVK-FSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 78

Query: 345 SFCNDGSKFLTAGYDKKIKYWDTETGQVIST-FSTGKIPYVVKLNPDDDKQNILLAGMSD 404
           +F +D    ++A  DK +K WD ETG +I T        + V  NP   + N++++G  D
Sbjct: 79  AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP---QSNMIVSGSFD 138

Query: 405 KKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 464
           + +  WD+ TG+  +    H   V  + F  +    V+SS D   R+W+ G    +K + 
Sbjct: 139 ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 198

Query: 465 EPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS 524
           +     +  +   PN  ++   +LDN + +++      L   K + GH+ A Y     FS
Sbjct: 199 DDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFL---KTYTGHVNAQYCISSAFS 258

Query: 525 -PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 565
             +G+ ++SG  +     W+  S K+ + L+ H    +    HP E
Sbjct: 259 VTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTE 297

[Close]

BLAST of Cp4.1LG01g15330 vs. TAIR 10
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 3.8e-26
Identity = 75/291 (25.77%), Postives = 127/291 (43.64%), Query Frame = 0


Query: 287 SGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDG 346
           SGH   V  ++F P  G LI S   D ++ +W V    K      GH  A+ D+ + +DG
Sbjct: 50  SGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 109

Query: 347 SKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 406
           S+ ++A  DK ++ WD ETG+ I   +     +V    P      ++++G  D     WD
Sbjct: 110 SQIVSASPDKTVRAWDVETGKQIKKMAEHS-SFVNSCCPTRRGPPLIISGSDDGTAKLWD 169

Query: 407 MNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 466
           M      Q +      +  ++F D   +  T   D  ++VW+         + E H  ++
Sbjct: 170 MRQRGAIQTFPDKY-QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTL-EGHQDTI 229

Query: 467 PSISVHPNTNWLAAQSLDNQILIYSTRERFQLNK-KKRFAG--HIVAGYACQVNFSPDGR 526
             +S+ P+ ++L    +DN++ ++  R     N+  K F G  H       + ++SPDG 
Sbjct: 230 TGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGT 289

Query: 527 FVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 575
            V +G  +     WD  S +    L  H G    C +HP E   + +C  D
Sbjct: 290 KVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPI-IGSCSSD 335

[Close]

BLAST of Cp4.1LG01g15330 vs. TAIR 10
Match: AT5G64730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 2.5e-25
Identity = 82/307 (26.71%), Postives = 142/307 (46.25%), Query Frame = 0


Query: 278 IPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAV 337
           +P +  H   GH   V A R F   G+  L+ G D  +++W+  + G  ++TY  H + V
Sbjct: 6   LPTKEAHILKGHEGAVLAAR-FNGDGNYALTCGKDRTIRLWNP-HRGILIKTYKSHGREV 65

Query: 338 RDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTF--STGKIPYVVKLNPDDDKQNILLA 397
           RD+   +D +KF + G D+++ YWD  TG+VI  F    G++   VK N   D  +++++
Sbjct: 66  RDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEV-NAVKFN---DSSSVVVS 125

Query: 398 GMSDKKIVQWDMNTGQI--TQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 457
              D+ +  WD  +  +   Q  D  L  V ++  V      +  S D ++R ++  I  
Sbjct: 126 AGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSV--VLTKTEIIGGSVDGTVRTFDMRIG- 185

Query: 458 VIKYISEPHMHSMPSISVHPNTNWLAAQSLDN--QILIYSTRERFQLNKKKRFAGHIVAG 517
             + +S+     +  IS+  + N + A  LD+  ++L  +T E  Q+ K     GHI   
Sbjct: 186 --REMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYK-----GHISKS 245

Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
           +      +     V+ G  +G  +FWD    KV    + H+ V     +HP E   + T 
Sbjct: 246 FKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDC-MLTS 295

Query: 578 GWDGLIK 579
             DG I+
Sbjct: 306 SVDGTIR 295

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g15330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9DC48	3.7e-151	50.66	Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1	[more]
O60508	1.1e-150	48.94	Pre-mRNA-processing factor 17 OS=Homo sapiens OX=9606 GN=CDC40 PE=1 SV=1	[more]
O43071	2.5e-99	36.53	Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P40968	4.5e-72	32.34	Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...	[more]
E9Q349	9.7e-43	29.90	WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g15330 vs. NCBI nr


Match Name	Identity	Description
KAG6601498.1	98.18	Pre-mRNA-processing factor 17, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023548120.1	100.00	pre-mRNA-processing factor 17-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971003.1	99.31	pre-mRNA-processing factor 17-like [Cucurbita maxima]	[more]
KAG7032278.1	99.31	Pre-mRNA-processing factor 17 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022956454.1	99.31	pre-mRNA-processing factor 17-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG01g15330 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1I5J4	99.31	pre-mRNA-processing factor 17-like OS=Cucurbita maxima OX=3661 GN=LOC111469774 P...	[more]
A0A6J1GZ29	99.31	pre-mRNA-processing factor 17-like OS=Cucurbita moschata OX=3662 GN=LOC111458183...	[more]
A0A5D3CVQ9	97.06	Pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
E5GBJ7	97.06	Pre-mRNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BE12	97.06	pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489012...	[more]

BLAST of Cp4.1LG01g15330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10580.1	3.9e-289	82.10	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G54520.1	2.8e-53	33.44	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	9.0e-28	24.83	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G43770.1	3.8e-26	25.77	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G64730.1	2.5e-25	26.71	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..177
None	No IPR available	COILS	Coil	Coil	coord: 209..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..257
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 286..320 score: 10.706503
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 416..448 score: 10.495596
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 330..367 score: 11.5765
None	No IPR available	CDD	cd00200	WD40	coord: 282..578 e-value: 8.43263E-68 score: 220.284
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 349..363 score: 29.88 coord: 435..449 score: 29.36 coord: 306..320 score: 33.9
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 409..448 e-value: 2.6E-6 score: 37.0 coord: 541..581 e-value: 0.032 score: 23.4 coord: 323..362 e-value: 4.4E-10 score: 49.5 coord: 497..538 e-value: 0.14 score: 21.2 coord: 365..406 e-value: 3.6 score: 13.5 coord: 452..491 e-value: 10.0 score: 10.6 coord: 279..319 e-value: 6.9E-9 score: 45.5
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 324..362 e-value: 5.1E-6 score: 27.1 coord: 410..447 e-value: 0.0014 score: 19.4 coord: 503..538 e-value: 0.031 score: 15.2 coord: 281..319 e-value: 4.9E-6 score: 27.2
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 330..371 score: 15.420926
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 286..320 score: 12.881143
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 416..448 score: 12.613797
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 266..581 e-value: 4.4E-96 score: 323.7
IPR032847	Pre-mRNA-processing factor 17	PANTHER	PTHR43979	PRE-MRNA-PROCESSING FACTOR 17	coord: 41..580
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 306..320
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 277..578

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g15330.1	Cp4.1LG01g15330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding