Cp4.1LG01g03980 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g03980
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	DNA polymerase
Location	Cp4.1LG01: 1498723 .. 1502627 (-)
RNA-Seq Expression	Cp4.1LG01g03980
Synteny	Cp4.1LG01g03980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCAAGCGAAAGGGCCTTGCTGAATCTGATTAGCGGTCCACATGGGCCTCATTTTGGACACTTGTCAATTGATACGCCAATCACCATTGCAATCTTGGACACGTGTCTTATCAAATGGTCAATCATAGTACATAATACACAAGAAGACCACAGTCTCGTGCAGAGGAAGCTTTAATGGCGCCAAAGCGAAGCAAGAGCCAAAATCTCCTTCAGGATCCACATGGAATGTTCGCAGGGATGGTTGTCCTTTTAATCGAAAAGGGGGTGCAGGCTCGCCGGTTGCAGGTTTTACATTTTTATGATCTTTCTCTGCAACTTTGTGTTTCAAATGAATTTAAAGTCGTTATTTGGGTTTTGGTTTCGTGGTTGAAGATTTGGAAACAGAAGTTGGTCCAAATGGGTGCTTGTATTGAGGATCGTTTGTCGAAAAGGGTCAGCCATATATTTGCTGCGACCTCGGACGCTCTTCTGCAAAAACTGGACGGTGAGCGTTTGGCACGCTTTGAAGGGGTGAGTCCTGCGTTTCTTGCTAATTACACATGTATATTCGTATGTGGGTTCTGACAATGATGAACTTTGGGGCGATCGCTCGTGAATGGTTATTGAATTAGGCTAATTACTACACATTTTCAGAAGGTTCTCTCATACGAGTGGCTAGAAGACAGCTTACGTTCAGGGGAGAGGGCATCAGAGGATTTGTACACTGTAAAAGTGGGTTTAGATGGGGAAAATGGAAGAGATGAGCCGCAGCCGTCTATTTCCAAAAAACTAAAACTGTCTCCCAACAATTCGGAAGAAGGAAGTGTTGAAAGTGGAGGAGATTCAAATGCTCCAACCCTTGTAACAAAGACTGCTACAGATCAAACAGTGACTAACCCAAGAACTTCTGATTCTCTTAATAGCAATGTAAGTTTCTTTTCTAACAGTTCTGAAATGTGTTTGCTCACCAGTTCATGAATTAGGAATGTTTTTTTCTGTAAATATGTGGCTTGATCATGGAAGTCTTTAAAAGTAATTTCCAGTTCTTCTTAAACTGCTCATATCTGAATGAATCATTTTGTTCTAAGAAGGTGAAACTTGTGCAGACATCTATGTCATACAGTCCACCGGATCTGAATAAAAACATAACTGAGATTTTTGGAAAACTTATCAACATATACAGAGGTGAGAGTGACGTTTTTTCGGACTAATTGAGTGCTCGTGTTTCCACGCCTGGTTTCTAATGGCTTGTCTTCTTTGTATTTTAAGCATTGGGTGATGAACGAAGGTCATTTAGCTACTACAAGGCAATTCCAGTAATTGAGAAGCTACCCTTTAAAATTGAGAGCATTGATCAGGTCAAACACCTGCCAGCAATAGGAAAATCGTTGCAGGATCATGTGAGTGTAGTAGCATAACGACTGTAGTTCCGAATTTGAATTTTCAACTAACTTCTTTCTCTTTTGAGGTGGTGTGTTATGTTACCTGCAATCAATCTGCTTGTTCATAGTATCATTTCCCATTGAATTGTGTGTTAGGGCTGGCCTGTTTTGGCTAGGTTCTTTCTGGACTTGAGATTGCTTCCGACCTCTGCAGGACTTCATTGGAAATCCATCTCGGCATGGGGGAGGACAGGACATGTCCTTGATATCATAGTCCTAAATGCTTTGCAATTTGTATATGGATTGATTATAGAAAGATTGTGCATTGTCTTGCAGATTCAAGAGATATCGACGACAGGAAAGTTATCGAAGTTGGAGCACTTTGAAACAGATGAAAAGGTGGTTGCAGATCTCTTAAGAAAACCTTAGACGTTCCACGTAGATAAATATCATCGATCTGCATTTACATATTTATCTTTCGATGTAGTGATGATCGATTCGTTTACTATCTTTCTCCTTGTTTACTTATCATATTGTAGTTTTAACCATTGTAGGTCCACACAATCTCACTTTTTGGGGAAGTATGGGGTATTGGACCAGCCACGGCTCTGCGATTATACGACAAAGGATGTAGAACCCTTGATGACTTGCAGAAGGAGTCGTTAACCCATGCGCAGAAAATAGGGTTGAAATATTTTGATGATATTAAACAGAGAATTCCTCGCAACGAGGTCGGCTGCTTTACTCTTGCGGTTTTTGCAACGTTAGCTTATGTTTCGGGTAAATGTGTTCTTGGATTTCTGAAGTCCATCTGATTTGATAGGTTCAGGACATGGAGAGTCTTCTTAAGAAGGCTGGGGAAGATGTTTTGCCAGGGGTGAGAATTGAAACACCTCCTTACATACTCATACTCGATCTAATAAATTTGGTTGTTAATTGATATTCATGGTGCTTGTTCTTTCAGGTTCTTATTGTCTGTGGAGGATCATTTCGGCGAGGGAAGTCGTCGTGTGGAGATATGGACATTGTAATCACACATCCCGATGGGAAAAGGTTTCAAGCCCCTAGCCTTAATCACTTCTGTATTATTACTCTTGAATGTCGTTTGAGATCTTGATGTGAGATCCCACATCAGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTATGGAAACCTCTCTCTAGCATACGCGTTTTAAAAACCTTGAGGGGAACCCCAAAAGGGAATGCCCAAATATCTGCTAGCGGTGAGCTTGGGGTGTTACACGAAACACCTTCTTATTATTAATAGTTCCTTGAGAGTTATTTTGTCTGTAATTTTAGCCATAGAGGTTTTCTACAAAGATACGTTAAGCATTTAAAGGATATGAAGTTTCTAAGGGAGGATCTGATATTCAGCACGCACAGTGAGGAGGTCAAATTACCCATTTCTCTCTGTTTATCAGTTTATGGCTACAAGATGCAATGATATGCTTTTCTCAATCCCTTTATATATATGCATTGTGAAACGATAAACAGGGAACAGATTCTGGTGTCGACACATATTTTGGCCTCTGCACGTATCCGGGAAGAGAATTGCGACACCGAATAGATCTGAAGGCACGAGTCCTCTCGTTTCTAATCTGCTCTTTCTTTGGTCACTTCTCGTTTAGAATAGAATGGTAACTTTGAAATAGGTTGTTAGAAAAGTGGTGATAGAATAGAACCTAGTTCGTTTATGGTAGATTCGATTCGACCGATAACCATTATGGGTTGACCCAGACACTCACGGATATTAAAAACCTATGCATTCGACTCTTGCAGGTGTATCCAAGAGACATATATGCATTTGGATTGCTTGCATGGACGGGAAACGATGTACTAAACAGGAGGTATGCTGTTTCTGTGCGTTTTCAAATAGTTTTTCGAGTTGAAAAGTGCAATGCCGTTATGCATGTTAGACGAACACGACTCTCCACAATAGTATGATATTGTCCACTTTAAGCATAAGCTCTCATGGTTTTGTTTTGGGCTTCTCCAAAAGTCTTCATATCAATGGAGAGAGTGTTCTTTGTTTATAAACCCATGATCATTCCATTCCTAAATTAGCCGACGTGGGACTTTCATCATCCAACAATGCATACAGGCTGAGATTAGTAGCGGAATCAAAAGGATTTAGGATGGATGATACTGGGCTGTATCCAGCTACCCAAGGATCTGGTGGTAAAAGGGTAATTAACTAATTGCCTTAGTTCAAAGACATATGGCCTTAAAATATAGGGCTGTCCCTCACTTACTCCATTGATGGTGATTATGCTTACAGGGTGCAAAAGGTAGTGCAAGTTTGAAGTTCGATACAGAAAAGGACATTTTCGAGTTCCTCGGGTTTCCATGGCTGGAACCCCAGCAAAGGAATATATGACTACTCTCTTCTTTTAATGTACATTATAACAACTGTTTGTTCATATATATATATATATAATAAGAATCACTAGAGGAAGGGGTTGAACCTTCGACCTTGTGGTTAACAGCCACACGCTCTAACCAAGTGAGCTACTCCAG

mRNA sequence

TATCAAGCGAAAGGGCCTTGCTGAATCTGATTAGCGGTCCACATGGGCCTCATTTTGGACACTTGTCAATTGATACGCCAATCACCATTGCAATCTTGGACACGTGTCTTATCAAATGGTCAATCATAGTACATAATACACAAGAAGACCACAGTCTCGTGCAGAGGAAGCTTTAATGGCGCCAAAGCGAAGCAAGAGCCAAAATCTCCTTCAGGATCCACATGGAATGTTCGCAGGGATGGTTGTCCTTTTAATCGAAAAGGGGGTGCAGGCTCGCCGGTTGCAGATTTGGAAACAGAAGTTGGTCCAAATGGGTGCTTGTATTGAGGATCGTTTGTCGAAAAGGGTCAGCCATATATTTGCTGCGACCTCGGACGCTCTTCTGCAAAAACTGGACGGTGAGCGTTTGGCACGCTTTGAAGGGAAGGTTCTCTCATACGAGTGGCTAGAAGACAGCTTACGTTCAGGGGAGAGGGCATCAGAGGATTTGTACACTGTAAAAGTGGGTTTAGATGGGGAAAATGGAAGAGATGAGCCGCAGCCGTCTATTTCCAAAAAACTAAAACTGTCTCCCAACAATTCGGAAGAAGGAAGTGTTGAAAGTGGAGGAGATTCAAATGCTCCAACCCTTGTAACAAAGACTGCTACAGATCAAACAGTGACTAACCCAAGAACTTCTGATTCTCTTAATAGCAATGTGAAACTTGTGCAGACATCTATGTCATACAGTCCACCGGATCTGAATAAAAACATAACTGAGATTTTTGGAAAACTTATCAACATATACAGAGCATTGGGTGATGAACGAAGGTCATTTAGCTACTACAAGGCAATTCCAGTAATTGAGAAGCTACCCTTTAAAATTGAGAGCATTGATCAGGTCAAACACCTGCCAGCAATAGGAAAATCGTTGCAGGATCATGGCTGGCCTGTTTTGGCTAGGTTCTTTCTGGACTTGAGATTGCTTCCGACCTCTGCAGGACTTCATTGGAAATCCATCTCGGCATGGGGGAGGACAGGACATGTCCTTGATATCATAGTCCTAAATGCTTTGCAATTTGTATATGGATTGATTATAGAAAGATTGTGCATTGTCTTGCAGATTCAAGAGATATCGACGACAGGAAAGTTATCGAAGTTGGAGCACTTTGAAACAGATGAAAAGGTCCACACAATCTCACTTTTTGGGGAAGTATGGGGTATTGGACCAGCCACGGCTCTGCGATTATACGACAAAGGATGTAGAACCCTTGATGACTTGCAGAAGGAGTCGTTAACCCATGCGCAGAAAATAGGGTTGAAATATTTTGATGATATTAAACAGAGAATTCCTCGCAACGAGGTTCAGGACATGGAGAGTCTTCTTAAGAAGGCTGGGGAAGATGTTTTGCCAGGGGTTCTTATTGTCTGTGGAGGATCATTTCGGCGAGGGAAGTCGTCGTGTGGAGATATGGACATTGTAATCACACATCCCGATGGGAAAAGATTCGATTCGACCGATAACCATTATGGGTTGACCCAGACACTCACGGATATTAAAAACCTATGCATTCGACTCTTGCAGGTGTATCCAAGAGACATATATGCATTTGGATTGCTTGCATGGACGGGAAACGATGTACTAAACAGGAGGTATGCTGTTTCTGGTGCAAAAGGTAGTGCAAGTTTGAAGTTCGATACAGAAAAGGACATTTTCGAGTTCCTCGGGTTTCCATGGCTGGAACCCCAGCAAAGGAATATATGACTACTCTCTTCTTTTAATGTACATTATAACAACTGTTTGTTCATATATATATATATATAATAAGAATCACTAGAGGAAGGGGTTGAACCTTCGACCTTGTGGTTAACAGCCACACGCTCTAACCAAGTGAGCTACTCCAG

Coding sequence (CDS)

ATGGCGCCAAAGCGAAGCAAGAGCCAAAATCTCCTTCAGGATCCACATGGAATGTTCGCAGGGATGGTTGTCCTTTTAATCGAAAAGGGGGTGCAGGCTCGCCGGTTGCAGATTTGGAAACAGAAGTTGGTCCAAATGGGTGCTTGTATTGAGGATCGTTTGTCGAAAAGGGTCAGCCATATATTTGCTGCGACCTCGGACGCTCTTCTGCAAAAACTGGACGGTGAGCGTTTGGCACGCTTTGAAGGGAAGGTTCTCTCATACGAGTGGCTAGAAGACAGCTTACGTTCAGGGGAGAGGGCATCAGAGGATTTGTACACTGTAAAAGTGGGTTTAGATGGGGAAAATGGAAGAGATGAGCCGCAGCCGTCTATTTCCAAAAAACTAAAACTGTCTCCCAACAATTCGGAAGAAGGAAGTGTTGAAAGTGGAGGAGATTCAAATGCTCCAACCCTTGTAACAAAGACTGCTACAGATCAAACAGTGACTAACCCAAGAACTTCTGATTCTCTTAATAGCAATGTGAAACTTGTGCAGACATCTATGTCATACAGTCCACCGGATCTGAATAAAAACATAACTGAGATTTTTGGAAAACTTATCAACATATACAGAGCATTGGGTGATGAACGAAGGTCATTTAGCTACTACAAGGCAATTCCAGTAATTGAGAAGCTACCCTTTAAAATTGAGAGCATTGATCAGGTCAAACACCTGCCAGCAATAGGAAAATCGTTGCAGGATCATGGCTGGCCTGTTTTGGCTAGGTTCTTTCTGGACTTGAGATTGCTTCCGACCTCTGCAGGACTTCATTGGAAATCCATCTCGGCATGGGGGAGGACAGGACATGTCCTTGATATCATAGTCCTAAATGCTTTGCAATTTGTATATGGATTGATTATAGAAAGATTGTGCATTGTCTTGCAGATTCAAGAGATATCGACGACAGGAAAGTTATCGAAGTTGGAGCACTTTGAAACAGATGAAAAGGTCCACACAATCTCACTTTTTGGGGAAGTATGGGGTATTGGACCAGCCACGGCTCTGCGATTATACGACAAAGGATGTAGAACCCTTGATGACTTGCAGAAGGAGTCGTTAACCCATGCGCAGAAAATAGGGTTGAAATATTTTGATGATATTAAACAGAGAATTCCTCGCAACGAGGTTCAGGACATGGAGAGTCTTCTTAAGAAGGCTGGGGAAGATGTTTTGCCAGGGGTTCTTATTGTCTGTGGAGGATCATTTCGGCGAGGGAAGTCGTCGTGTGGAGATATGGACATTGTAATCACACATCCCGATGGGAAAAGATTCGATTCGACCGATAACCATTATGGGTTGACCCAGACACTCACGGATATTAAAAACCTATGCATTCGACTCTTGCAGGTGTATCCAAGAGACATATATGCATTTGGATTGCTTGCATGGACGGGAAACGATGTACTAAACAGGAGGTATGCTGTTTCTGGTGCAAAAGGTAGTGCAAGTTTGAAGTTCGATACAGAAAAGGACATTTTCGAGTTCCTCGGGTTTCCATGGCTGGAACCCCAGCAAAGGAATATATGA

Protein sequence

MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSHIFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDEPQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQTSMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLIIERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLDDLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGKSSCGDMDIVITHPDGKRFDSTDNHYGLTQTLTDIKNLCIRLLQVYPRDIYAFGLLAWTGNDVLNRRYAVSGAKGSASLKFDTEKDIFEFLGFPWLEPQQRNI

Homology

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BLAST of Cp4.1LG01g03980 vs. ExPASy Swiss-Prot
Match: Q9FNY4 (DNA polymerase lambda OS=Arabidopsis thaliana OX=3702 GN=POLL PE=1 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 1.3e-139
Identity = 283/589 (48.05%), Postives = 359/589 (60.95%), Query Frame = 0


Query: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACI-EDRLSKRVS 60
           MA KR ++++   DP GMFAGMVV ++E GVQ RRLQIWKQKLVQMGA I EDR++K+V+
Sbjct: 1   MAAKRGRNRSPSPDPEGMFAGMVVFMVEIGVQRRRLQIWKQKLVQMGAVIEEDRVTKKVT 60

Query: 61  HIFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRD 120
           H+ A   +ALL K   ERL+ F  +++ Y+WLEDSL SGE+A+EDLY +K+  +  +   
Sbjct: 61  HVLAMNLEALLHKFGKERLSHFTARLMLYQWLEDSLTSGEKANEDLYVLKIDSEEVDKPK 120

Query: 121 EPQPSIS---------KKLKLSPNNSEEGSVESGGDS-NAPTLVTKTATDQTVTNPRTSD 180
           +  P+IS         K+ + SP+  +   VES  ++  +P   T  +   T  +P    
Sbjct: 121 KSLPAISGSEDQSSPQKRTRYSPDAGDFKGVESHSNTQGSPDSPTSCSVPSTSASPGEGI 180

Query: 181 SLNSNVKLVQTSMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFK 240
           +        +++  Y PPDLN+NITEIFGKLINIYRALG++RRSFSYYKAIPVIEK P +
Sbjct: 181 AETPTSPQSESTSVYKPPDLNRNITEIFGKLINIYRALGEDRRSFSYYKAIPVIEKFPTR 240

Query: 241 IESIDQVKHLPAIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIV 300
           IES+DQ+KHLP IGK+++DH                                        
Sbjct: 241 IESVDQLKHLPGIGKAMRDH---------------------------------------- 300

Query: 301 LNALQFVYGLIIERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATAL 360
                               IQEI TTGKLSKLEHFETDEKV TISLFGEVWG+GPATAL
Sbjct: 301 --------------------IQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGVGPATAL 360

Query: 361 RLYDKGCRTLDDLQKE-SLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGV 420
           +LY+KG RTL+DL+ E SLTHAQK+GLKYFDDIK RIPR EVQ+ME LL++ GE+ LPGV
Sbjct: 361 KLYEKGHRTLEDLKNEDSLTHAQKLGLKYFDDIKTRIPRQEVQEMEQLLQRVGEETLPGV 420

Query: 421 LIVCGGSFRRGKSSCGDMDIVITHPDGK-------------------RFD---STDNHYG 480
            IVCGGS+RRGK++CGD+DIV+THPDG+                   R D   ST +  G
Sbjct: 421 NIVCGGSYRRGKATCGDLDIVVTHPDGQSHKGFLTKFVKRLKEMNFLREDLIFSTHSEEG 480

Query: 481 LTQTLTDIKNLCI--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------- 523
               +     LC         R+  +VYPRDIY+FGL+AWTGNDVLNRR  +        
Sbjct: 481 TDSGVDTYFGLCTYPGQELRRRIDFKVYPRDIYSFGLIAWTGNDVLNRRLRLLAESKGYR 529

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BLAST of Cp4.1LG01g03980 vs. ExPASy Swiss-Prot
Match: Q67VC8 (DNA polymerase lambda OS=Oryza sativa subsp. japonica OX=39947 GN=POLL PE=1 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 5.7e-124
Identity = 273/619 (44.10%), Postives = 349/619 (56.38%), Query Frame = 0


Query: 1   MAPKR---SKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKR 60
           MAPKR   +++     DP GMF G+   ++   VQ+RRL++WKQ+L QMG  ++++L+ +
Sbjct: 1   MAPKRKPPARAAAAKLDPDGMFRGVSAFVVPHAVQSRRLEVWKQRLAQMGGRVQEKLAAK 60

Query: 61  -----VSHIFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGL 120
                V+H+ AA + ALL++LD   L RF G V+S+EWLE+ L+SGER  E  + +    
Sbjct: 61  GGGGAVTHVLAADAKALLRELDAAWLHRFRGSVVSFEWLEECLKSGERLPEHKFAI---- 120

Query: 121 DGENGRDEPQP------------SISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATD- 180
              N  +E +P              +K+ K+S +  E     +GG+  +   +     D 
Sbjct: 121 ---NYEEEFKPKKEGGAAGSGVLQSAKRSKISSDGPENRKETAGGNRESRDAIAHPNEDS 180

Query: 181 QTVTNPRT---SDSLNSNVKLVQTSM--------------SYSPPDLNKNITEIFGKLIN 240
             V  P T   S S + + K    S               +Y+PPDLN+NITEIFGKLIN
Sbjct: 181 DVVKGPSTCTSSQSASGDSKETIASQNAFKAEEASSGESSTYAPPDLNRNITEIFGKLIN 240

Query: 241 IYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHGWPVLARFFLDLR 300
           IYRALGD+RRSFSYYKAIPVIEKLPFKIES DQVK LPAIGKSL+DH             
Sbjct: 241 IYRALGDDRRSFSYYKAIPVIEKLPFKIESADQVKDLPAIGKSLKDH------------- 300

Query: 301 LLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLIIERLCIVLQIQEISTTGKLSKL 360
                                                          I EI  TGKLSKL
Sbjct: 301 -----------------------------------------------INEIVNTGKLSKL 360

Query: 361 EHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLDDLQK-ESLTHAQKIGLKYFDDI 420
           EHFE DEKV T+SLFGEVWG+GPATAL+LYDKG RTLDDLQK +SLT AQ+IGLK+FDDI
Sbjct: 361 EHFENDEKVRTVSLFGEVWGVGPATALKLYDKGHRTLDDLQKDDSLTSAQRIGLKFFDDI 420

Query: 421 KQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGKSSCGDMDIVITHPDGK----- 480
           KQRIPR+EV +ME LL++ G D+LPGV+IVCGGS+RRGKSSCGDMDI+ITHPDG+     
Sbjct: 421 KQRIPRHEVSEMEKLLQEVGTDILPGVIIVCGGSYRRGKSSCGDMDIIITHPDGESHVGF 480

Query: 481 --------------RFD-------------STDNHYGL-TQTLTDIKNLCIRL-LQVYPR 523
                         R D               D ++GL T    ++++   R+ L+VYPR
Sbjct: 481 LPKFVQRLKGINFLREDLIFSIHSIEGTDCGVDTYFGLCTYPGRELRH---RIDLKVYPR 540

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BLAST of Cp4.1LG01g03980 vs. ExPASy Swiss-Prot
Match: Q6DRD3 (DNA polymerase beta OS=Danio rerio OX=7955 GN=polb PE=2 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 1.0e-32
Identity = 95/269 (35.32%), Postives = 139/269 (51.67%), Query Frame = 0


Query: 306 IVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLDDLQK- 365
           I  +I E  TTGKL KLE    D+   +I+    V GIGPA A + +D+G R L+DL+K 
Sbjct: 68  IAEKIDEFLTTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFDEGVRNLEDLKKI 127

Query: 366 -ESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGKSSC 425
              L H Q+IGLKYF++ ++RIPR+E+Q ME+L+ K  + V P  +    GS+RRG  S 
Sbjct: 128 EHKLNHHQQIGLKYFEEFEKRIPRSEMQKMEALILKELDIVDPEYIGTICGSYRRGAESS 187

Query: 426 GDMDIVITHPD--------GKRFDSTDNHYG----LTQTLT--DIKNLCIRLLQ------ 485
           GD+DI++THPD         K   +  +H      +T TL+  D K + +  LQ      
Sbjct: 188 GDIDILLTHPDFTSQSEKQPKLLHAVVDHLESIGFITDTLSKGDTKFMGVCQLQKEKEEE 247

Query: 486 ------------VYPRDIYAFGLLAWTGNDVLN-------------------RRYAVSGA 522
                       + P+D Y  G+L +TG+D+ N                   R   V+G 
Sbjct: 248 EEESLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIRPLGVTGV 307

[Close]

BLAST of Cp4.1LG01g03980 vs. ExPASy Swiss-Prot
Match: O57383 (DNA polymerase beta OS=Xenopus laevis OX=8355 GN=polb PE=1 SV=3)

HSP 1 Score: 137.9 bits (346), Expect = 3.3e-31
Identity = 87/266 (32.71%), Postives = 130/266 (48.87%), Query Frame = 0


Query: 306 IVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLDDLQ-- 365
           I  +I E   TGKL KLE    D+   +I+    V GIGPA A + +D+G +TLDDL+  
Sbjct: 69  IAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVTGIGPAAARKFFDEGIKTLDDLRNN 128

Query: 366 KESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGKSSC 425
           +  L H QKIGLK+FDD ++RIPR E+  M+ ++     ++ P  +    GSFRRG  S 
Sbjct: 129 EHKLNHHQKIGLKHFDDFEKRIPRKEMLQMQEIILDKVNNLDPEYIATVCGSFRRGAESS 188

Query: 426 GDMDIVITHPDGKRFDSTDNH--YGLTQTLTDIKNLCIRL-------------------- 485
           GDMDI++THPD     +      + + Q L D   +   L                    
Sbjct: 189 GDMDILLTHPDFTSESAKQPRLLHQVVQCLEDCNFITDTLVKGDTKFMGVCQLPCESDQD 248

Query: 486 -------LQVYPRDIYAFGLLAWTGNDVLN-------------------RRYAVSGAKGS 522
                  +++ P+D Y  G+L +TG+D+ N                   R   V+G  G 
Sbjct: 249 YPYRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTLRPLGVTGIAGE 308

[Close]

BLAST of Cp4.1LG01g03980 vs. ExPASy Swiss-Prot
Match: P06766 (DNA polymerase beta OS=Rattus norvegicus OX=10116 GN=Polb PE=1 SV=4)

HSP 1 Score: 137.1 bits (344), Expect = 5.6e-31
Identity = 106/388 (27.32%), Postives = 164/388 (42.27%), Query Frame = 0


Query: 189 LNKNITEIFGKLINIYRALGDERRSF-SYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQ 248
           LN  IT++  +L N  + +      + +Y KA  VI K P KI+S  + K LP +G  + 
Sbjct: 11  LNGGITDMLVELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIA 70

Query: 249 DHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLIIERLCIV 308
           +                                                           
Sbjct: 71  E----------------------------------------------------------- 130

Query: 309 LQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLDDLQK--E 368
            +I E   TGKL KLE    D+   +I+    V GIGP+ A +L D+G +TL+DL+K  +
Sbjct: 131 -KIDEFLATGKLRKLEKIRQDDTSSSINFLTRVTGIGPSAARKLVDEGIKTLEDLRKNED 190

Query: 369 SLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGKSSCGD 428
            L H Q+IGLKYF+D ++RIPR E+  M+ ++    + + P  +    GSFRRG  S GD
Sbjct: 191 KLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKLDPEYIATVCGSFRRGAESSGD 250

Query: 429 MDIVITHPD------------GKRFDSTDNHYGLTQTL----TDIKNLC----------- 488
           MD+++THP+             +  +       +T TL    T    +C           
Sbjct: 251 MDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSENDENEY 310

Query: 489 ------IRLLQVYPRDIYAFGLLAWTGNDVLN-------------------RRYAVSGAK 522
                 IRL+   P+D Y  G+L +TG+D+ N                   R   V+G  
Sbjct: 311 PHRRIDIRLI---PKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVA 334

[Close]

BLAST of Cp4.1LG01g03980 vs. NCBI nr
Match: XP_023524101.1 (DNA polymerase lambda isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 800 bits (2066), Expect = 4.22e-288
Identity = 440/577 (76.26%), Postives = 445/577 (77.12%), Query Frame = 0


Query: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
           MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH
Sbjct: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60

Query: 61  IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
           IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE
Sbjct: 61  IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120

Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
           PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT
Sbjct: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180

Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
           SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240

Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
           AIGKSLQDH                                                   
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300

Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
                    IQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360

Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
           DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420

Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
           SSCGDMDIVITHPDGK                   R D   ST +  G    +     LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480

Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
                    R+ L+VYPRDIYAFGLLAWTGNDVLNRR  +                    
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAESKGFRMDDTGLYPATQG 517

[Close]

BLAST of Cp4.1LG01g03980 vs. NCBI nr
Match: XP_023524186.1 (DNA polymerase lambda isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 793 bits (2049), Expect = 1.57e-285
Identity = 439/577 (76.08%), Postives = 444/577 (76.95%), Query Frame = 0


Query: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
           MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH
Sbjct: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60

Query: 61  IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
           IFAATSDALLQKLDGERLARFEG VLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE
Sbjct: 61  IFAATSDALLQKLDGERLARFEG-VLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120

Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
           PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT
Sbjct: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180

Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
           SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240

Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
           AIGKSLQDH                                                   
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300

Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
                    IQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360

Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
           DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420

Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
           SSCGDMDIVITHPDGK                   R D   ST +  G    +     LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480

Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
                    R+ L+VYPRDIYAFGLLAWTGNDVLNRR  +                    
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAESKGFRMDDTGLYPATQG 516

[Close]

BLAST of Cp4.1LG01g03980 vs. NCBI nr
Match: XP_023524268.1 (DNA polymerase lambda isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 785 bits (2028), Expect = 2.12e-282
Identity = 435/577 (75.39%), Postives = 440/577 (76.26%), Query Frame = 0


Query: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
           MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH
Sbjct: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60

Query: 61  IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
           IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE
Sbjct: 61  IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120

Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
           PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN     T
Sbjct: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN-----T 180

Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
           SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240

Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
           AIGKSLQDH                                                   
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300

Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
                    IQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360

Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
           DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420

Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
           SSCGDMDIVITHPDGK                   R D   ST +  G    +     LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480

Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
                    R+ L+VYPRDIYAFGLLAWTGNDVLNRR  +                    
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAESKGFRMDDTGLYPATQG 512

[Close]

BLAST of Cp4.1LG01g03980 vs. NCBI nr
Match: KAG7030802.1 (DNA polymerase lambda [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 782 bits (2019), Expect = 1.62e-280
Identity = 431/579 (74.44%), Postives = 447/579 (77.20%), Query Frame = 0


Query: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
           MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH
Sbjct: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60

Query: 61  IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
           IFAA SDALLQKLD ERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE
Sbjct: 61  IFAANSDALLQKLDSERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120

Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
           PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN     T
Sbjct: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN-----T 180

Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
           SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240

Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
           AIGKSLQDH   V++   +   L  TS  +H                          G+ 
Sbjct: 241 AIGKSLQDH---VISGPEIASDLCRTSLEIH-------------------------LGMG 300

Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
            +R C    IQEI TTGKLSKLEHFETDEKV TISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 EDRTCP--WIQEILTTGKLSKLEHFETDEKVQTISLFGEVWGIGPATALRLYDKGCRTLD 360

Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
           DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420

Query: 421 SSCGDMDIVITHPDGKRF--------------------------------DSTDNHYGL- 480
           SSCGDMDIVITHPDGK                                     D ++GL 
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480

Query: 481 TQTLTDIKNLCIRLLQVYPRDIYAFGLLAWTGNDVLNRRYAV------------------ 522
           T    ++++      +VYPRDIYAFGLLAWTGNDVLNRR  +                  
Sbjct: 481 TYPGRELRHRIDLKARVYPRDIYAFGLLAWTGNDVLNRRLRLVAESKGFRMDDTGLYPAT 540

[Close]

BLAST of Cp4.1LG01g03980 vs. NCBI nr
Match: XP_022942603.1 (DNA polymerase lambda isoform X1 [Cucurbita moschata])

HSP 1 Score: 776 bits (2003), Expect = 1.63e-278
Identity = 428/577 (74.18%), Postives = 439/577 (76.08%), Query Frame = 0


Query: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
           MAPKRSKSQ+LLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKL+QMGA IEDRLSKRVSH
Sbjct: 1   MAPKRSKSQSLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLLQMGARIEDRLSKRVSH 60

Query: 61  IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
           IFAA+SDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE
Sbjct: 61  IFAASSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120

Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
           PQPSISKKLKLSPNNSEEGS+ESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN+KLVQT
Sbjct: 121 PQPSISKKLKLSPNNSEEGSIESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNMKLVQT 180

Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
           SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240

Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
           AIGKSLQDH                                                   
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300

Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
                    IQEI TTGKL KLEHFETDEKV TISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEILTTGKLLKLEHFETDEKVQTISLFGEVWGIGPATALRLYDKGCRTLD 360

Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
           DLQKESLTHAQKIGLKYFDDIKQRIP NEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420

Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
           SSCGDMDIVITHPDGK                   R D   ST +  G    +     LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480

Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
                    R+ L+VYPRDIYAFGLLAWTGNDVLNRR  +                    
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAETKGFRMDDTGLYPAAQG 517

[Close]

BLAST of Cp4.1LG01g03980 vs. ExPASy TrEMBL
Match: A0A6J1FV83 (DNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447588 PE=3 SV=1)

HSP 1 Score: 776 bits (2003), Expect = 7.89e-279
Identity = 428/577 (74.18%), Postives = 439/577 (76.08%), Query Frame = 0


Query: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
           MAPKRSKSQ+LLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKL+QMGA IEDRLSKRVSH
Sbjct: 1   MAPKRSKSQSLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLLQMGARIEDRLSKRVSH 60

Query: 61  IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
           IFAA+SDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE
Sbjct: 61  IFAASSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120

Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
           PQPSISKKLKLSPNNSEEGS+ESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN+KLVQT
Sbjct: 121 PQPSISKKLKLSPNNSEEGSIESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNMKLVQT 180

Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
           SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240

Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
           AIGKSLQDH                                                   
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300

Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
                    IQEI TTGKL KLEHFETDEKV TISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEILTTGKLLKLEHFETDEKVQTISLFGEVWGIGPATALRLYDKGCRTLD 360

Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
           DLQKESLTHAQKIGLKYFDDIKQRIP NEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420

Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
           SSCGDMDIVITHPDGK                   R D   ST +  G    +     LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480

Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
                    R+ L+VYPRDIYAFGLLAWTGNDVLNRR  +                    
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAETKGFRMDDTGLYPAAQG 517

[Close]

BLAST of Cp4.1LG01g03980 vs. ExPASy TrEMBL
Match: A0A6J1J8G3 (DNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111483514 PE=3 SV=1)

HSP 1 Score: 771 bits (1991), Expect = 5.28e-277
Identity = 425/577 (73.66%), Postives = 437/577 (75.74%), Query Frame = 0


Query: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
           MAPKRSKSQNLLQDPHGMF GMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH
Sbjct: 1   MAPKRSKSQNLLQDPHGMFGGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60

Query: 61  IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
           IFAA+SDALLQKLDGERLARF  KVLSYEWLEDSLRSGERASEDLYTV VGLDGENGRDE
Sbjct: 61  IFAASSDALLQKLDGERLARFGRKVLSYEWLEDSLRSGERASEDLYTVNVGLDGENGRDE 120

Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
           PQPSISKKLKLSPNNSEEGSVESGGDS APTLVTKTATDQTVTNPRTSDSLNSNVKLVQT
Sbjct: 121 PQPSISKKLKLSPNNSEEGSVESGGDSIAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180

Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
           SMSYSPPDLNKNIT+IFGKLINIYRALGDERRSFSYYKAIPVIE+LPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITDIFGKLINIYRALGDERRSFSYYKAIPVIEELPFKIESIDQVKHLP 240

Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
           AIGKSLQDH                                                   
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300

Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
                    IQEI TTGKLSKLEHFETDEKV TISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEILTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGCRTLD 360

Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
           DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMES+LKKAGE+VLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESILKKAGEEVLPGVLIVCGGSFRRGK 420

Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
           SSCGDMDIVITHPDGK                   R D   ST +  G    +     LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480

Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
                    R+ L+VYPRDIYAFGLLAWTGNDVLNRR  +                    
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAESKGFRMDDTGLYPATQG 517

[Close]

BLAST of Cp4.1LG01g03980 vs. ExPASy TrEMBL
Match: A0A6J1J542 (DNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111483514 PE=3 SV=1)

HSP 1 Score: 769 bits (1986), Expect = 2.93e-276
Identity = 425/577 (73.66%), Postives = 438/577 (75.91%), Query Frame = 0


Query: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
           MAPKRSKSQNLLQDPHGMF GMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH
Sbjct: 1   MAPKRSKSQNLLQDPHGMFGGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60

Query: 61  IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
           IFAA+SDALLQKLDGERLARF G+VLSYEWLEDSLRSGERASEDLYTV VGLDGENGRDE
Sbjct: 61  IFAASSDALLQKLDGERLARF-GRVLSYEWLEDSLRSGERASEDLYTVNVGLDGENGRDE 120

Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
           PQPSISKKLKLSPNNSEEGSVESGGDS APTLVTKTATDQTVTNPRTSDSLNSNVKLVQT
Sbjct: 121 PQPSISKKLKLSPNNSEEGSVESGGDSIAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180

Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
           SMSYSPPDLNKNIT+IFGKLINIYRALGDERRSFSYYKAIPVIE+LPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITDIFGKLINIYRALGDERRSFSYYKAIPVIEELPFKIESIDQVKHLP 240

Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
           AIGKSLQDH                                                   
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300

Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
                    IQEI TTGKLSKLEHFETDEKV TISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEILTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGCRTLD 360

Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
           DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMES+LKKAGE+VLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESILKKAGEEVLPGVLIVCGGSFRRGK 420

Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
           SSCGDMDIVITHPDGK                   R D   ST +  G    +     LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480

Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
                    R+ L+VYPRDIYAFGLLAWTGNDVLNRR  +                    
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAESKGFRMDDTGLYPATQG 516

[Close]

BLAST of Cp4.1LG01g03980 vs. ExPASy TrEMBL
Match: A0A6J1FRT1 (DNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447588 PE=3 SV=1)

HSP 1 Score: 762 bits (1968), Expect = 1.39e-273
Identity = 424/577 (73.48%), Postives = 434/577 (75.22%), Query Frame = 0


Query: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
           MAPKRSKSQ+LLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKL+QMGA IEDRLSKRVSH
Sbjct: 1   MAPKRSKSQSLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLLQMGARIEDRLSKRVSH 60

Query: 61  IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
           IFAA+SDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE
Sbjct: 61  IFAASSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120

Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
           PQPSISKKLKLSPNNSEEGS+ESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN     T
Sbjct: 121 PQPSISKKLKLSPNNSEEGSIESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN-----T 180

Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
           SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240

Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
           AIGKSLQDH                                                   
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300

Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
                    IQEI TTGKL KLEHFETDEKV TISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEILTTGKLLKLEHFETDEKVQTISLFGEVWGIGPATALRLYDKGCRTLD 360

Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
           DLQKESLTHAQKIGLKYFDDIKQRIP NEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420

Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
           SSCGDMDIVITHPDGK                   R D   ST +  G    +     LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480

Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
                    R+ L+VYPRDIYAFGLLAWTGNDVLNRR  +                    
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAETKGFRMDDTGLYPAAQG 512

[Close]

BLAST of Cp4.1LG01g03980 vs. ExPASy TrEMBL
Match: A0A6J1JDV4 (DNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111483514 PE=3 SV=1)

HSP 1 Score: 756 bits (1953), Expect = 2.65e-271
Identity = 420/577 (72.79%), Postives = 432/577 (74.87%), Query Frame = 0


Query: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
           MAPKRSKSQNLLQDPHGMF GMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH
Sbjct: 1   MAPKRSKSQNLLQDPHGMFGGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60

Query: 61  IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
           IFAA+SDALLQKLDGERLARF  KVLSYEWLEDSLRSGERASEDLYTV VGLDGENGRDE
Sbjct: 61  IFAASSDALLQKLDGERLARFGRKVLSYEWLEDSLRSGERASEDLYTVNVGLDGENGRDE 120

Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
           PQPSISKKLKLSPNNSEEGSVESGGDS APTLVTKTATDQTVTNPRTSDSLNSN     T
Sbjct: 121 PQPSISKKLKLSPNNSEEGSVESGGDSIAPTLVTKTATDQTVTNPRTSDSLNSN-----T 180

Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
           SMSYSPPDLNKNIT+IFGKLINIYRALGDERRSFSYYKAIPVIE+LPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITDIFGKLINIYRALGDERRSFSYYKAIPVIEELPFKIESIDQVKHLP 240

Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
           AIGKSLQDH                                                   
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300

Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
                    IQEI TTGKLSKLEHFETDEKV TISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEILTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGCRTLD 360

Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
           DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMES+LKKAGE+VLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESILKKAGEEVLPGVLIVCGGSFRRGK 420

Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
           SSCGDMDIVITHPDGK                   R D   ST +  G    +     LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480

Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
                    R+ L+VYPRDIYAFGLLAWTGNDVLNRR  +                    
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAESKGFRMDDTGLYPATQG 512

[Close]

BLAST of Cp4.1LG01g03980 vs. TAIR 10
Match: AT1G10520.1 (DNA polymerase lambda (POLL) )

HSP 1 Score: 498.0 bits (1281), Expect = 8.9e-141
Identity = 283/589 (48.05%), Postives = 359/589 (60.95%), Query Frame = 0


Query: 1   MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACI-EDRLSKRVS 60
           MA KR ++++   DP GMFAGMVV ++E GVQ RRLQIWKQKLVQMGA I EDR++K+V+
Sbjct: 1   MAAKRGRNRSPSPDPEGMFAGMVVFMVEIGVQRRRLQIWKQKLVQMGAVIEEDRVTKKVT 60

Query: 61  HIFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRD 120
           H+ A   +ALL K   ERL+ F  +++ Y+WLEDSL SGE+A+EDLY +K+  +  +   
Sbjct: 61  HVLAMNLEALLHKFGKERLSHFTARLMLYQWLEDSLTSGEKANEDLYVLKIDSEEVDKPK 120

Query: 121 EPQPSIS---------KKLKLSPNNSEEGSVESGGDS-NAPTLVTKTATDQTVTNPRTSD 180
           +  P+IS         K+ + SP+  +   VES  ++  +P   T  +   T  +P    
Sbjct: 121 KSLPAISGSEDQSSPQKRTRYSPDAGDFKGVESHSNTQGSPDSPTSCSVPSTSASPGEGI 180

Query: 181 SLNSNVKLVQTSMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFK 240
           +        +++  Y PPDLN+NITEIFGKLINIYRALG++RRSFSYYKAIPVIEK P +
Sbjct: 181 AETPTSPQSESTSVYKPPDLNRNITEIFGKLINIYRALGEDRRSFSYYKAIPVIEKFPTR 240

Query: 241 IESIDQVKHLPAIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIV 300
           IES+DQ+KHLP IGK+++DH                                        
Sbjct: 241 IESVDQLKHLPGIGKAMRDH---------------------------------------- 300

Query: 301 LNALQFVYGLIIERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATAL 360
                               IQEI TTGKLSKLEHFETDEKV TISLFGEVWG+GPATAL
Sbjct: 301 --------------------IQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGVGPATAL 360

Query: 361 RLYDKGCRTLDDLQKE-SLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGV 420
           +LY+KG RTL+DL+ E SLTHAQK+GLKYFDDIK RIPR EVQ+ME LL++ GE+ LPGV
Sbjct: 361 KLYEKGHRTLEDLKNEDSLTHAQKLGLKYFDDIKTRIPRQEVQEMEQLLQRVGEETLPGV 420

Query: 421 LIVCGGSFRRGKSSCGDMDIVITHPDGK-------------------RFD---STDNHYG 480
            IVCGGS+RRGK++CGD+DIV+THPDG+                   R D   ST +  G
Sbjct: 421 NIVCGGSYRRGKATCGDLDIVVTHPDGQSHKGFLTKFVKRLKEMNFLREDLIFSTHSEEG 480

Query: 481 LTQTLTDIKNLCI--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------- 523
               +     LC         R+  +VYPRDIY+FGL+AWTGNDVLNRR  +        
Sbjct: 481 TDSGVDTYFGLCTYPGQELRRRIDFKVYPRDIYSFGLIAWTGNDVLNRRLRLLAESKGYR 529

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g03980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNY4	1.3e-139	48.05	DNA polymerase lambda OS=Arabidopsis thaliana OX=3702 GN=POLL PE=1 SV=1	[more]
Q67VC8	5.7e-124	44.10	DNA polymerase lambda OS=Oryza sativa subsp. japonica OX=39947 GN=POLL PE=1 SV=1	[more]
Q6DRD3	1.0e-32	35.32	DNA polymerase beta OS=Danio rerio OX=7955 GN=polb PE=2 SV=2	[more]
O57383	3.3e-31	32.71	DNA polymerase beta OS=Xenopus laevis OX=8355 GN=polb PE=1 SV=3	[more]
P06766	5.6e-31	27.32	DNA polymerase beta OS=Rattus norvegicus OX=10116 GN=Polb PE=1 SV=4	[more]

BLAST of Cp4.1LG01g03980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524101.1	4.22e-288	76.26	DNA polymerase lambda isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023524186.1	1.57e-285	76.08	DNA polymerase lambda isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023524268.1	2.12e-282	75.39	DNA polymerase lambda isoform X3 [Cucurbita pepo subsp. pepo]	[more]
KAG7030802.1	1.62e-280	74.44	DNA polymerase lambda [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022942603.1	1.63e-278	74.18	DNA polymerase lambda isoform X1 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG01g03980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FV83	7.89e-279	74.18	DNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447588 PE=3 SV=1	[more]
A0A6J1J8G3	5.28e-277	73.66	DNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111483514 PE=3 SV=1	[more]
A0A6J1J542	2.93e-276	73.66	DNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111483514 PE=3 SV=1	[more]
A0A6J1FRT1	1.39e-273	73.48	DNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447588 PE=3 SV=1	[more]
A0A6J1JDV4	2.65e-271	72.79	DNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111483514 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g03980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10520.1	8.9e-141	48.05	DNA polymerase lambda (POLL)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002008	DNA polymerase family X, beta-like	PRINTS	PR00870	DNAPOLXBETA	coord: 372..386 score: 57.33 coord: 412..431 score: 52.0
IPR022312	DNA polymerase family X	PRINTS	PR00869	DNAPOLX	coord: 425..433 score: 54.7 coord: 411..425 score: 49.74 coord: 342..359 score: 43.59
IPR022312	DNA polymerase family X	PANTHER	PTHR11276	DNA POLYMERASE TYPE-X FAMILY MEMBER	coord: 18..521
IPR002054	DNA-directed DNA polymerase X	SMART	SM00483	polxneu3	coord: 188..521 e-value: 2.6E-62 score: 223.0
IPR002054	DNA-directed DNA polymerase X	CDD	cd00141	NT_POLXc	coord: 191..520 e-value: 6.49806E-78 score: 245.182
IPR028207	DNA polymerase beta, palm domain	PFAM	PF14792	DNA_pol_B_palm	coord: 384..444 e-value: 1.3E-17 score: 64.1
None	No IPR available	GENE3D	1.10.150.20		coord: 327..383 e-value: 6.3E-22 score: 79.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..171
None	No IPR available	PANTHER	PTHR11276:SF1	DNA POLYMERASE IV	coord: 18..521
None	No IPR available	SUPERFAMILY	81585	PsbU/PolX domain-like	coord: 328..384
IPR027421	DNA polymerase lambda lyase domain superfamily	GENE3D	1.10.150.110		coord: 172..326 e-value: 7.7E-19 score: 69.7
IPR027421	DNA polymerase lambda lyase domain superfamily	SUPERFAMILY	47802	DNA polymerase beta, N-terminal domain-like	coord: 184..248
IPR029398	DNA polymerase beta, thumb domain	PFAM	PF14791	DNA_pol_B_thumb	coord: 495..521 e-value: 7.8E-6 score: 26.0
IPR018944	DNA polymerase lambda, fingers domain	PFAM	PF10391	DNA_pol_lambd_f	coord: 336..381 e-value: 4.4E-19 score: 68.1
IPR010996	DNA polymerase beta-like, N-terminal domain	PFAM	PF14716	HHH_8	coord: 190..249 e-value: 7.3E-11 score: 42.3
IPR043519	Nucleotidyltransferase superfamily	GENE3D	3.30.460.10	Beta Polymerase, domain 2	coord: 384..471 e-value: 7.4E-16 score: 60.3
IPR043519	Nucleotidyltransferase superfamily	SUPERFAMILY	81301	Nucleotidyltransferase	coord: 384..521
IPR036420	BRCT domain superfamily	GENE3D	3.40.50.10190	BRCT domain	coord: 10..110 e-value: 3.0E-16 score: 61.1
IPR036420	BRCT domain superfamily	SUPERFAMILY	52113	BRCT domain	coord: 8..109
IPR037160	DNA polymerase, thumb domain superfamily	GENE3D	3.30.210.10	DNA polymerase, thumb domain	coord: 472..522 e-value: 7.0E-7 score: 31.2
IPR019843	DNA polymerase family X, binding site	PROSITE	PS00522	DNA_POLYMERASE_X	coord: 414..433
IPR001357	BRCT domain	PROSITE	PS50172	BRCT	coord: 14..108 score: 14.36894

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g03980.1	Cp4.1LG01g03980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006303	double-strand break repair via nonhomologous end joining
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0034061	DNA polymerase activity
molecular_function	GO:0016779	nucleotidyltransferase activity