Homology
BLAST of Cp4.1LG01g03980 vs. ExPASy Swiss-Prot
Match:
Q9FNY4 (DNA polymerase lambda OS=Arabidopsis thaliana OX=3702 GN=POLL PE=1 SV=1)
HSP 1 Score: 498.0 bits (1281), Expect = 1.3e-139
Identity = 283/589 (48.05%), Postives = 359/589 (60.95%), Query Frame = 0
Query: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACI-EDRLSKRVS 60
MA KR ++++ DP GMFAGMVV ++E GVQ RRLQIWKQKLVQMGA I EDR++K+V+
Sbjct: 1 MAAKRGRNRSPSPDPEGMFAGMVVFMVEIGVQRRRLQIWKQKLVQMGAVIEEDRVTKKVT 60
Query: 61 HIFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRD 120
H+ A +ALL K ERL+ F +++ Y+WLEDSL SGE+A+EDLY +K+ + +
Sbjct: 61 HVLAMNLEALLHKFGKERLSHFTARLMLYQWLEDSLTSGEKANEDLYVLKIDSEEVDKPK 120
Query: 121 EPQPSIS---------KKLKLSPNNSEEGSVESGGDS-NAPTLVTKTATDQTVTNPRTSD 180
+ P+IS K+ + SP+ + VES ++ +P T + T +P
Sbjct: 121 KSLPAISGSEDQSSPQKRTRYSPDAGDFKGVESHSNTQGSPDSPTSCSVPSTSASPGEGI 180
Query: 181 SLNSNVKLVQTSMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFK 240
+ +++ Y PPDLN+NITEIFGKLINIYRALG++RRSFSYYKAIPVIEK P +
Sbjct: 181 AETPTSPQSESTSVYKPPDLNRNITEIFGKLINIYRALGEDRRSFSYYKAIPVIEKFPTR 240
Query: 241 IESIDQVKHLPAIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIV 300
IES+DQ+KHLP IGK+++DH
Sbjct: 241 IESVDQLKHLPGIGKAMRDH---------------------------------------- 300
Query: 301 LNALQFVYGLIIERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATAL 360
IQEI TTGKLSKLEHFETDEKV TISLFGEVWG+GPATAL
Sbjct: 301 --------------------IQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGVGPATAL 360
Query: 361 RLYDKGCRTLDDLQKE-SLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGV 420
+LY+KG RTL+DL+ E SLTHAQK+GLKYFDDIK RIPR EVQ+ME LL++ GE+ LPGV
Sbjct: 361 KLYEKGHRTLEDLKNEDSLTHAQKLGLKYFDDIKTRIPRQEVQEMEQLLQRVGEETLPGV 420
Query: 421 LIVCGGSFRRGKSSCGDMDIVITHPDGK-------------------RFD---STDNHYG 480
IVCGGS+RRGK++CGD+DIV+THPDG+ R D ST + G
Sbjct: 421 NIVCGGSYRRGKATCGDLDIVVTHPDGQSHKGFLTKFVKRLKEMNFLREDLIFSTHSEEG 480
Query: 481 LTQTLTDIKNLCI--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------- 523
+ LC R+ +VYPRDIY+FGL+AWTGNDVLNRR +
Sbjct: 481 TDSGVDTYFGLCTYPGQELRRRIDFKVYPRDIYSFGLIAWTGNDVLNRRLRLLAESKGYR 529
BLAST of Cp4.1LG01g03980 vs. ExPASy Swiss-Prot
Match:
Q67VC8 (DNA polymerase lambda OS=Oryza sativa subsp. japonica OX=39947 GN=POLL PE=1 SV=1)
HSP 1 Score: 446.0 bits (1146), Expect = 5.7e-124
Identity = 273/619 (44.10%), Postives = 349/619 (56.38%), Query Frame = 0
Query: 1 MAPKR---SKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKR 60
MAPKR +++ DP GMF G+ ++ VQ+RRL++WKQ+L QMG ++++L+ +
Sbjct: 1 MAPKRKPPARAAAAKLDPDGMFRGVSAFVVPHAVQSRRLEVWKQRLAQMGGRVQEKLAAK 60
Query: 61 -----VSHIFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGL 120
V+H+ AA + ALL++LD L RF G V+S+EWLE+ L+SGER E + +
Sbjct: 61 GGGGAVTHVLAADAKALLRELDAAWLHRFRGSVVSFEWLEECLKSGERLPEHKFAI---- 120
Query: 121 DGENGRDEPQP------------SISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATD- 180
N +E +P +K+ K+S + E +GG+ + + D
Sbjct: 121 ---NYEEEFKPKKEGGAAGSGVLQSAKRSKISSDGPENRKETAGGNRESRDAIAHPNEDS 180
Query: 181 QTVTNPRT---SDSLNSNVKLVQTSM--------------SYSPPDLNKNITEIFGKLIN 240
V P T S S + + K S +Y+PPDLN+NITEIFGKLIN
Sbjct: 181 DVVKGPSTCTSSQSASGDSKETIASQNAFKAEEASSGESSTYAPPDLNRNITEIFGKLIN 240
Query: 241 IYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHGWPVLARFFLDLR 300
IYRALGD+RRSFSYYKAIPVIEKLPFKIES DQVK LPAIGKSL+DH
Sbjct: 241 IYRALGDDRRSFSYYKAIPVIEKLPFKIESADQVKDLPAIGKSLKDH------------- 300
Query: 301 LLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLIIERLCIVLQIQEISTTGKLSKL 360
I EI TGKLSKL
Sbjct: 301 -----------------------------------------------INEIVNTGKLSKL 360
Query: 361 EHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLDDLQK-ESLTHAQKIGLKYFDDI 420
EHFE DEKV T+SLFGEVWG+GPATAL+LYDKG RTLDDLQK +SLT AQ+IGLK+FDDI
Sbjct: 361 EHFENDEKVRTVSLFGEVWGVGPATALKLYDKGHRTLDDLQKDDSLTSAQRIGLKFFDDI 420
Query: 421 KQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGKSSCGDMDIVITHPDGK----- 480
KQRIPR+EV +ME LL++ G D+LPGV+IVCGGS+RRGKSSCGDMDI+ITHPDG+
Sbjct: 421 KQRIPRHEVSEMEKLLQEVGTDILPGVIIVCGGSYRRGKSSCGDMDIIITHPDGESHVGF 480
Query: 481 --------------RFD-------------STDNHYGL-TQTLTDIKNLCIRL-LQVYPR 523
R D D ++GL T ++++ R+ L+VYPR
Sbjct: 481 LPKFVQRLKGINFLREDLIFSIHSIEGTDCGVDTYFGLCTYPGRELRH---RIDLKVYPR 540
BLAST of Cp4.1LG01g03980 vs. ExPASy Swiss-Prot
Match:
Q6DRD3 (DNA polymerase beta OS=Danio rerio OX=7955 GN=polb PE=2 SV=2)
HSP 1 Score: 142.9 bits (359), Expect = 1.0e-32
Identity = 95/269 (35.32%), Postives = 139/269 (51.67%), Query Frame = 0
Query: 306 IVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLDDLQK- 365
I +I E TTGKL KLE D+ +I+ V GIGPA A + +D+G R L+DL+K
Sbjct: 68 IAEKIDEFLTTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFDEGVRNLEDLKKI 127
Query: 366 -ESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGKSSC 425
L H Q+IGLKYF++ ++RIPR+E+Q ME+L+ K + V P + GS+RRG S
Sbjct: 128 EHKLNHHQQIGLKYFEEFEKRIPRSEMQKMEALILKELDIVDPEYIGTICGSYRRGAESS 187
Query: 426 GDMDIVITHPD--------GKRFDSTDNHYG----LTQTLT--DIKNLCIRLLQ------ 485
GD+DI++THPD K + +H +T TL+ D K + + LQ
Sbjct: 188 GDIDILLTHPDFTSQSEKQPKLLHAVVDHLESIGFITDTLSKGDTKFMGVCQLQKEKEEE 247
Query: 486 ------------VYPRDIYAFGLLAWTGNDVLN-------------------RRYAVSGA 522
+ P+D Y G+L +TG+D+ N R V+G
Sbjct: 248 EEESLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIRPLGVTGV 307
BLAST of Cp4.1LG01g03980 vs. ExPASy Swiss-Prot
Match:
O57383 (DNA polymerase beta OS=Xenopus laevis OX=8355 GN=polb PE=1 SV=3)
HSP 1 Score: 137.9 bits (346), Expect = 3.3e-31
Identity = 87/266 (32.71%), Postives = 130/266 (48.87%), Query Frame = 0
Query: 306 IVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLDDLQ-- 365
I +I E TGKL KLE D+ +I+ V GIGPA A + +D+G +TLDDL+
Sbjct: 69 IAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVTGIGPAAARKFFDEGIKTLDDLRNN 128
Query: 366 KESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGKSSC 425
+ L H QKIGLK+FDD ++RIPR E+ M+ ++ ++ P + GSFRRG S
Sbjct: 129 EHKLNHHQKIGLKHFDDFEKRIPRKEMLQMQEIILDKVNNLDPEYIATVCGSFRRGAESS 188
Query: 426 GDMDIVITHPDGKRFDSTDNH--YGLTQTLTDIKNLCIRL-------------------- 485
GDMDI++THPD + + + Q L D + L
Sbjct: 189 GDMDILLTHPDFTSESAKQPRLLHQVVQCLEDCNFITDTLVKGDTKFMGVCQLPCESDQD 248
Query: 486 -------LQVYPRDIYAFGLLAWTGNDVLN-------------------RRYAVSGAKGS 522
+++ P+D Y G+L +TG+D+ N R V+G G
Sbjct: 249 YPYRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTLRPLGVTGIAGE 308
BLAST of Cp4.1LG01g03980 vs. ExPASy Swiss-Prot
Match:
P06766 (DNA polymerase beta OS=Rattus norvegicus OX=10116 GN=Polb PE=1 SV=4)
HSP 1 Score: 137.1 bits (344), Expect = 5.6e-31
Identity = 106/388 (27.32%), Postives = 164/388 (42.27%), Query Frame = 0
Query: 189 LNKNITEIFGKLINIYRALGDERRSF-SYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQ 248
LN IT++ +L N + + + +Y KA VI K P KI+S + K LP +G +
Sbjct: 11 LNGGITDMLVELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIA 70
Query: 249 DHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLIIERLCIV 308
+
Sbjct: 71 E----------------------------------------------------------- 130
Query: 309 LQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLDDLQK--E 368
+I E TGKL KLE D+ +I+ V GIGP+ A +L D+G +TL+DL+K +
Sbjct: 131 -KIDEFLATGKLRKLEKIRQDDTSSSINFLTRVTGIGPSAARKLVDEGIKTLEDLRKNED 190
Query: 369 SLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGKSSCGD 428
L H Q+IGLKYF+D ++RIPR E+ M+ ++ + + P + GSFRRG S GD
Sbjct: 191 KLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKLDPEYIATVCGSFRRGAESSGD 250
Query: 429 MDIVITHPD------------GKRFDSTDNHYGLTQTL----TDIKNLC----------- 488
MD+++THP+ + + +T TL T +C
Sbjct: 251 MDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSENDENEY 310
Query: 489 ------IRLLQVYPRDIYAFGLLAWTGNDVLN-------------------RRYAVSGAK 522
IRL+ P+D Y G+L +TG+D+ N R V+G
Sbjct: 311 PHRRIDIRLI---PKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVA 334
BLAST of Cp4.1LG01g03980 vs. NCBI nr
Match:
XP_023524101.1 (DNA polymerase lambda isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 800 bits (2066), Expect = 4.22e-288
Identity = 440/577 (76.26%), Postives = 445/577 (77.12%), Query Frame = 0
Query: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH
Sbjct: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
Query: 61 IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE
Sbjct: 61 IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT
Sbjct: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
AIGKSLQDH
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300
Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
IQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
SSCGDMDIVITHPDGK R D ST + G + LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480
Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
R+ L+VYPRDIYAFGLLAWTGNDVLNRR +
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAESKGFRMDDTGLYPATQG 517
BLAST of Cp4.1LG01g03980 vs. NCBI nr
Match:
XP_023524186.1 (DNA polymerase lambda isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 793 bits (2049), Expect = 1.57e-285
Identity = 439/577 (76.08%), Postives = 444/577 (76.95%), Query Frame = 0
Query: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH
Sbjct: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
Query: 61 IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
IFAATSDALLQKLDGERLARFEG VLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE
Sbjct: 61 IFAATSDALLQKLDGERLARFEG-VLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT
Sbjct: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
AIGKSLQDH
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300
Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
IQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
SSCGDMDIVITHPDGK R D ST + G + LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480
Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
R+ L+VYPRDIYAFGLLAWTGNDVLNRR +
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAESKGFRMDDTGLYPATQG 516
BLAST of Cp4.1LG01g03980 vs. NCBI nr
Match:
XP_023524268.1 (DNA polymerase lambda isoform X3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 785 bits (2028), Expect = 2.12e-282
Identity = 435/577 (75.39%), Postives = 440/577 (76.26%), Query Frame = 0
Query: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH
Sbjct: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
Query: 61 IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE
Sbjct: 61 IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN T
Sbjct: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN-----T 180
Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
AIGKSLQDH
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300
Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
IQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
SSCGDMDIVITHPDGK R D ST + G + LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480
Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
R+ L+VYPRDIYAFGLLAWTGNDVLNRR +
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAESKGFRMDDTGLYPATQG 512
BLAST of Cp4.1LG01g03980 vs. NCBI nr
Match:
KAG7030802.1 (DNA polymerase lambda [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 782 bits (2019), Expect = 1.62e-280
Identity = 431/579 (74.44%), Postives = 447/579 (77.20%), Query Frame = 0
Query: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH
Sbjct: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
Query: 61 IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
IFAA SDALLQKLD ERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE
Sbjct: 61 IFAANSDALLQKLDSERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN T
Sbjct: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN-----T 180
Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
AIGKSLQDH V++ + L TS +H G+
Sbjct: 241 AIGKSLQDH---VISGPEIASDLCRTSLEIH-------------------------LGMG 300
Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
+R C IQEI TTGKLSKLEHFETDEKV TISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 EDRTCP--WIQEILTTGKLSKLEHFETDEKVQTISLFGEVWGIGPATALRLYDKGCRTLD 360
Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
Query: 421 SSCGDMDIVITHPDGKRF--------------------------------DSTDNHYGL- 480
SSCGDMDIVITHPDGK D ++GL
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480
Query: 481 TQTLTDIKNLCIRLLQVYPRDIYAFGLLAWTGNDVLNRRYAV------------------ 522
T ++++ +VYPRDIYAFGLLAWTGNDVLNRR +
Sbjct: 481 TYPGRELRHRIDLKARVYPRDIYAFGLLAWTGNDVLNRRLRLVAESKGFRMDDTGLYPAT 540
BLAST of Cp4.1LG01g03980 vs. NCBI nr
Match:
XP_022942603.1 (DNA polymerase lambda isoform X1 [Cucurbita moschata])
HSP 1 Score: 776 bits (2003), Expect = 1.63e-278
Identity = 428/577 (74.18%), Postives = 439/577 (76.08%), Query Frame = 0
Query: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
MAPKRSKSQ+LLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKL+QMGA IEDRLSKRVSH
Sbjct: 1 MAPKRSKSQSLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLLQMGARIEDRLSKRVSH 60
Query: 61 IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
IFAA+SDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE
Sbjct: 61 IFAASSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
PQPSISKKLKLSPNNSEEGS+ESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN+KLVQT
Sbjct: 121 PQPSISKKLKLSPNNSEEGSIESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNMKLVQT 180
Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
AIGKSLQDH
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300
Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
IQEI TTGKL KLEHFETDEKV TISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEILTTGKLLKLEHFETDEKVQTISLFGEVWGIGPATALRLYDKGCRTLD 360
Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
DLQKESLTHAQKIGLKYFDDIKQRIP NEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
SSCGDMDIVITHPDGK R D ST + G + LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480
Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
R+ L+VYPRDIYAFGLLAWTGNDVLNRR +
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAETKGFRMDDTGLYPAAQG 517
BLAST of Cp4.1LG01g03980 vs. ExPASy TrEMBL
Match:
A0A6J1FV83 (DNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447588 PE=3 SV=1)
HSP 1 Score: 776 bits (2003), Expect = 7.89e-279
Identity = 428/577 (74.18%), Postives = 439/577 (76.08%), Query Frame = 0
Query: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
MAPKRSKSQ+LLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKL+QMGA IEDRLSKRVSH
Sbjct: 1 MAPKRSKSQSLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLLQMGARIEDRLSKRVSH 60
Query: 61 IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
IFAA+SDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE
Sbjct: 61 IFAASSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
PQPSISKKLKLSPNNSEEGS+ESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN+KLVQT
Sbjct: 121 PQPSISKKLKLSPNNSEEGSIESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNMKLVQT 180
Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
AIGKSLQDH
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300
Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
IQEI TTGKL KLEHFETDEKV TISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEILTTGKLLKLEHFETDEKVQTISLFGEVWGIGPATALRLYDKGCRTLD 360
Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
DLQKESLTHAQKIGLKYFDDIKQRIP NEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
SSCGDMDIVITHPDGK R D ST + G + LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480
Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
R+ L+VYPRDIYAFGLLAWTGNDVLNRR +
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAETKGFRMDDTGLYPAAQG 517
BLAST of Cp4.1LG01g03980 vs. ExPASy TrEMBL
Match:
A0A6J1J8G3 (DNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111483514 PE=3 SV=1)
HSP 1 Score: 771 bits (1991), Expect = 5.28e-277
Identity = 425/577 (73.66%), Postives = 437/577 (75.74%), Query Frame = 0
Query: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
MAPKRSKSQNLLQDPHGMF GMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH
Sbjct: 1 MAPKRSKSQNLLQDPHGMFGGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
Query: 61 IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
IFAA+SDALLQKLDGERLARF KVLSYEWLEDSLRSGERASEDLYTV VGLDGENGRDE
Sbjct: 61 IFAASSDALLQKLDGERLARFGRKVLSYEWLEDSLRSGERASEDLYTVNVGLDGENGRDE 120
Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
PQPSISKKLKLSPNNSEEGSVESGGDS APTLVTKTATDQTVTNPRTSDSLNSNVKLVQT
Sbjct: 121 PQPSISKKLKLSPNNSEEGSVESGGDSIAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
SMSYSPPDLNKNIT+IFGKLINIYRALGDERRSFSYYKAIPVIE+LPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITDIFGKLINIYRALGDERRSFSYYKAIPVIEELPFKIESIDQVKHLP 240
Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
AIGKSLQDH
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300
Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
IQEI TTGKLSKLEHFETDEKV TISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEILTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGCRTLD 360
Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMES+LKKAGE+VLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESILKKAGEEVLPGVLIVCGGSFRRGK 420
Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
SSCGDMDIVITHPDGK R D ST + G + LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480
Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
R+ L+VYPRDIYAFGLLAWTGNDVLNRR +
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAESKGFRMDDTGLYPATQG 517
BLAST of Cp4.1LG01g03980 vs. ExPASy TrEMBL
Match:
A0A6J1J542 (DNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111483514 PE=3 SV=1)
HSP 1 Score: 769 bits (1986), Expect = 2.93e-276
Identity = 425/577 (73.66%), Postives = 438/577 (75.91%), Query Frame = 0
Query: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
MAPKRSKSQNLLQDPHGMF GMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH
Sbjct: 1 MAPKRSKSQNLLQDPHGMFGGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
Query: 61 IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
IFAA+SDALLQKLDGERLARF G+VLSYEWLEDSLRSGERASEDLYTV VGLDGENGRDE
Sbjct: 61 IFAASSDALLQKLDGERLARF-GRVLSYEWLEDSLRSGERASEDLYTVNVGLDGENGRDE 120
Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
PQPSISKKLKLSPNNSEEGSVESGGDS APTLVTKTATDQTVTNPRTSDSLNSNVKLVQT
Sbjct: 121 PQPSISKKLKLSPNNSEEGSVESGGDSIAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
SMSYSPPDLNKNIT+IFGKLINIYRALGDERRSFSYYKAIPVIE+LPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITDIFGKLINIYRALGDERRSFSYYKAIPVIEELPFKIESIDQVKHLP 240
Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
AIGKSLQDH
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300
Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
IQEI TTGKLSKLEHFETDEKV TISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEILTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGCRTLD 360
Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMES+LKKAGE+VLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESILKKAGEEVLPGVLIVCGGSFRRGK 420
Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
SSCGDMDIVITHPDGK R D ST + G + LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480
Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
R+ L+VYPRDIYAFGLLAWTGNDVLNRR +
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAESKGFRMDDTGLYPATQG 516
BLAST of Cp4.1LG01g03980 vs. ExPASy TrEMBL
Match:
A0A6J1FRT1 (DNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447588 PE=3 SV=1)
HSP 1 Score: 762 bits (1968), Expect = 1.39e-273
Identity = 424/577 (73.48%), Postives = 434/577 (75.22%), Query Frame = 0
Query: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
MAPKRSKSQ+LLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKL+QMGA IEDRLSKRVSH
Sbjct: 1 MAPKRSKSQSLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLLQMGARIEDRLSKRVSH 60
Query: 61 IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
IFAA+SDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE
Sbjct: 61 IFAASSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
PQPSISKKLKLSPNNSEEGS+ESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN T
Sbjct: 121 PQPSISKKLKLSPNNSEEGSIESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSN-----T 180
Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
AIGKSLQDH
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300
Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
IQEI TTGKL KLEHFETDEKV TISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEILTTGKLLKLEHFETDEKVQTISLFGEVWGIGPATALRLYDKGCRTLD 360
Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
DLQKESLTHAQKIGLKYFDDIKQRIP NEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
SSCGDMDIVITHPDGK R D ST + G + LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480
Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
R+ L+VYPRDIYAFGLLAWTGNDVLNRR +
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAETKGFRMDDTGLYPAAQG 512
BLAST of Cp4.1LG01g03980 vs. ExPASy TrEMBL
Match:
A0A6J1JDV4 (DNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111483514 PE=3 SV=1)
HSP 1 Score: 756 bits (1953), Expect = 2.65e-271
Identity = 420/577 (72.79%), Postives = 432/577 (74.87%), Query Frame = 0
Query: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
MAPKRSKSQNLLQDPHGMF GMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH
Sbjct: 1 MAPKRSKSQNLLQDPHGMFGGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH 60
Query: 61 IFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120
IFAA+SDALLQKLDGERLARF KVLSYEWLEDSLRSGERASEDLYTV VGLDGENGRDE
Sbjct: 61 IFAASSDALLQKLDGERLARFGRKVLSYEWLEDSLRSGERASEDLYTVNVGLDGENGRDE 120
Query: 121 PQPSISKKLKLSPNNSEEGSVESGGDSNAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT 180
PQPSISKKLKLSPNNSEEGSVESGGDS APTLVTKTATDQTVTNPRTSDSLNSN T
Sbjct: 121 PQPSISKKLKLSPNNSEEGSVESGGDSIAPTLVTKTATDQTVTNPRTSDSLNSN-----T 180
Query: 181 SMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLP 240
SMSYSPPDLNKNIT+IFGKLINIYRALGDERRSFSYYKAIPVIE+LPFKIESIDQVKHLP
Sbjct: 181 SMSYSPPDLNKNITDIFGKLINIYRALGDERRSFSYYKAIPVIEELPFKIESIDQVKHLP 240
Query: 241 AIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIVLNALQFVYGLI 300
AIGKSLQDH
Sbjct: 241 AIGKSLQDH--------------------------------------------------- 300
Query: 301 IERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATALRLYDKGCRTLD 360
IQEI TTGKLSKLEHFETDEKV TISLFGEVWGIGPATALRLYDKGCRTLD
Sbjct: 301 ---------IQEILTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGCRTLD 360
Query: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVLIVCGGSFRRGK 420
DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMES+LKKAGE+VLPGVLIVCGGSFRRGK
Sbjct: 361 DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESILKKAGEEVLPGVLIVCGGSFRRGK 420
Query: 421 SSCGDMDIVITHPDGK-------------------RFD---STDNHYGLTQTLTDIKNLC 480
SSCGDMDIVITHPDGK R D ST + G + LC
Sbjct: 421 SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC 480
Query: 481 I--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------------------- 522
R+ L+VYPRDIYAFGLLAWTGNDVLNRR +
Sbjct: 481 TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAESKGFRMDDTGLYPATQG 512
BLAST of Cp4.1LG01g03980 vs. TAIR 10
Match:
AT1G10520.1 (DNA polymerase lambda (POLL) )
HSP 1 Score: 498.0 bits (1281), Expect = 8.9e-141
Identity = 283/589 (48.05%), Postives = 359/589 (60.95%), Query Frame = 0
Query: 1 MAPKRSKSQNLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLVQMGACI-EDRLSKRVS 60
MA KR ++++ DP GMFAGMVV ++E GVQ RRLQIWKQKLVQMGA I EDR++K+V+
Sbjct: 1 MAAKRGRNRSPSPDPEGMFAGMVVFMVEIGVQRRRLQIWKQKLVQMGAVIEEDRVTKKVT 60
Query: 61 HIFAATSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRD 120
H+ A +ALL K ERL+ F +++ Y+WLEDSL SGE+A+EDLY +K+ + +
Sbjct: 61 HVLAMNLEALLHKFGKERLSHFTARLMLYQWLEDSLTSGEKANEDLYVLKIDSEEVDKPK 120
Query: 121 EPQPSIS---------KKLKLSPNNSEEGSVESGGDS-NAPTLVTKTATDQTVTNPRTSD 180
+ P+IS K+ + SP+ + VES ++ +P T + T +P
Sbjct: 121 KSLPAISGSEDQSSPQKRTRYSPDAGDFKGVESHSNTQGSPDSPTSCSVPSTSASPGEGI 180
Query: 181 SLNSNVKLVQTSMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFK 240
+ +++ Y PPDLN+NITEIFGKLINIYRALG++RRSFSYYKAIPVIEK P +
Sbjct: 181 AETPTSPQSESTSVYKPPDLNRNITEIFGKLINIYRALGEDRRSFSYYKAIPVIEKFPTR 240
Query: 241 IESIDQVKHLPAIGKSLQDHGWPVLARFFLDLRLLPTSAGLHWKSISAWGRTGHVLDIIV 300
IES+DQ+KHLP IGK+++DH
Sbjct: 241 IESVDQLKHLPGIGKAMRDH---------------------------------------- 300
Query: 301 LNALQFVYGLIIERLCIVLQIQEISTTGKLSKLEHFETDEKVHTISLFGEVWGIGPATAL 360
IQEI TTGKLSKLEHFETDEKV TISLFGEVWG+GPATAL
Sbjct: 301 --------------------IQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGVGPATAL 360
Query: 361 RLYDKGCRTLDDLQKE-SLTHAQKIGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGV 420
+LY+KG RTL+DL+ E SLTHAQK+GLKYFDDIK RIPR EVQ+ME LL++ GE+ LPGV
Sbjct: 361 KLYEKGHRTLEDLKNEDSLTHAQKLGLKYFDDIKTRIPRQEVQEMEQLLQRVGEETLPGV 420
Query: 421 LIVCGGSFRRGKSSCGDMDIVITHPDGK-------------------RFD---STDNHYG 480
IVCGGS+RRGK++CGD+DIV+THPDG+ R D ST + G
Sbjct: 421 NIVCGGSYRRGKATCGDLDIVVTHPDGQSHKGFLTKFVKRLKEMNFLREDLIFSTHSEEG 480
Query: 481 LTQTLTDIKNLCI--------RL-LQVYPRDIYAFGLLAWTGNDVLNRRYAV-------- 523
+ LC R+ +VYPRDIY+FGL+AWTGNDVLNRR +
Sbjct: 481 TDSGVDTYFGLCTYPGQELRRRIDFKVYPRDIYSFGLIAWTGNDVLNRRLRLLAESKGYR 529
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FNY4 | 1.3e-139 | 48.05 | DNA polymerase lambda OS=Arabidopsis thaliana OX=3702 GN=POLL PE=1 SV=1 | [more] |
Q67VC8 | 5.7e-124 | 44.10 | DNA polymerase lambda OS=Oryza sativa subsp. japonica OX=39947 GN=POLL PE=1 SV=1 | [more] |
Q6DRD3 | 1.0e-32 | 35.32 | DNA polymerase beta OS=Danio rerio OX=7955 GN=polb PE=2 SV=2 | [more] |
O57383 | 3.3e-31 | 32.71 | DNA polymerase beta OS=Xenopus laevis OX=8355 GN=polb PE=1 SV=3 | [more] |
P06766 | 5.6e-31 | 27.32 | DNA polymerase beta OS=Rattus norvegicus OX=10116 GN=Polb PE=1 SV=4 | [more] |
Match Name | E-value | Identity | Description | |
XP_023524101.1 | 4.22e-288 | 76.26 | DNA polymerase lambda isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
XP_023524186.1 | 1.57e-285 | 76.08 | DNA polymerase lambda isoform X2 [Cucurbita pepo subsp. pepo] | [more] |
XP_023524268.1 | 2.12e-282 | 75.39 | DNA polymerase lambda isoform X3 [Cucurbita pepo subsp. pepo] | [more] |
KAG7030802.1 | 1.62e-280 | 74.44 | DNA polymerase lambda [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022942603.1 | 1.63e-278 | 74.18 | DNA polymerase lambda isoform X1 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FV83 | 7.89e-279 | 74.18 | DNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447588 PE=3 SV=1 | [more] |
A0A6J1J8G3 | 5.28e-277 | 73.66 | DNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111483514 PE=3 SV=1 | [more] |
A0A6J1J542 | 2.93e-276 | 73.66 | DNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111483514 PE=3 SV=1 | [more] |
A0A6J1FRT1 | 1.39e-273 | 73.48 | DNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447588 PE=3 SV=1 | [more] |
A0A6J1JDV4 | 2.65e-271 | 72.79 | DNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111483514 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G10520.1 | 8.9e-141 | 48.05 | DNA polymerase lambda (POLL) | [more] |