Cp4.1LG01g00660 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g00660
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG01: 3487128 .. 3487448 (-)
RNA-Seq ExpressionCp4.1LG01g00660
SyntenyCp4.1LG01g00660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAATCTCCACCGAATCTTCTACTCCCTCCTCCTCTTGCTTCATCGAATGCGGCACTCCGACGATTCCGAGCGTTCAACTCGTGTCGAAATCGGTGTCGGATCGGCTTCTCGGCAAGTTCTTCGACGCCTCGCAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGGCGAGTTTTTTTGGATTCTCCGGTCGATGTTTGCTCCGGTTATGAGGTTCTCTCGAAGCTTGAGAAGGCGAAGACGGCATGGAGGAAATTCGTAATCTGTTTTAGAGTAAGTGCTCTCACGATCGCATTGTGA

mRNA sequence

ATGCCAATCTCCACCGAATCTTCTACTCCCTCCTCCTCTTGCTTCATCGAATGCGGCACTCCGACGATTCCGAGCGTTCAACTCGTGTCGAAATCGGTGTCGGATCGGCTTCTCGGCAAGTTCTTCGACGCCTCGCAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGGCGAGTTTTTTTGGATTCTCCGGTCGATGTTTGCTCCGGTTATGAGGTTCTCTCGAAGCTTGAGAAGGCGAAGACGGCATGGAGGAAATTCGTAATCTGTTTTAGAGTAAGTGCTCTCACGATCGCATTGTGA

Coding sequence (CDS)

ATGCCAATCTCCACCGAATCTTCTACTCCCTCCTCCTCTTGCTTCATCGAATGCGGCACTCCGACGATTCCGAGCGTTCAACTCGTGTCGAAATCGGTGTCGGATCGGCTTCTCGGCAAGTTCTTCGACGCCTCGCAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGGCGAGTTTTTTTGGATTCTCCGGTCGATGTTTGCTCCGGTTATGAGGTTCTCTCGAAGCTTGAGAAGGCGAAGACGGCATGGAGGAAATTCGTAATCTGTTTTAGAGTAAGTGCTCTCACGATCGCATTGTGA

Protein sequence

MPISTESSTPSSSCFIECGTPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPVDVCSGYEVLSKLEKAKTAWRKFVICFRVSALTIAL
Homology
BLAST of Cp4.1LG01g00660 vs. NCBI nr
Match: KAG7031141.1 (hypothetical protein SDJN02_05180, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206 bits (525), Expect = 5.68e-67
Identity = 103/106 (97.17%), Postives = 104/106 (98.11%), Query Frame = 0

Query: 1   MPISTESSTPSSSCFIECGTPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP 60
           MPISTESSTPSSSCFIEC  PTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP
Sbjct: 1   MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP 60

Query: 61  IPRRVFLDSPVDVCSGYEVLSKLEKAKTAWRKFVICFRVSALTIAL 106
           IPRRVFLDSP+DVCSGYEVLSKLEKAKTAWRKFVICFRVSALTIAL
Sbjct: 61  IPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRVSALTIAL 106

BLAST of Cp4.1LG01g00660 vs. NCBI nr
Match: XP_023516499.1 (uncharacterized protein LOC111780353 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 200 bits (509), Expect = 1.57e-64
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0

Query: 1  MPISTESSTPSSSCFIECGTPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP 60
          MPISTESSTPSSSCFIECGTPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP
Sbjct: 1  MPISTESSTPSSSCFIECGTPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP 60

Query: 61 IPRRVFLDSPVDVCSGYEVLSKLEKAKTAWRKFVICFR 98
          IPRRVFLDSPVDVCSGYEVLSKLEKAKTAWRKFVICFR
Sbjct: 61 IPRRVFLDSPVDVCSGYEVLSKLEKAKTAWRKFVICFR 98

BLAST of Cp4.1LG01g00660 vs. NCBI nr
Match: XP_022983484.1 (uncharacterized protein LOC111482071 [Cucurbita maxima])

HSP 1 Score: 197 bits (500), Expect = 3.70e-63
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0

Query: 1  MPISTESSTPSSSCFIECGTPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP 60
          MPISTESSTPSSSCFIEC TPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP
Sbjct: 1  MPISTESSTPSSSCFIECATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP 60

Query: 61 IPRRVFLDSPVDVCSGYEVLSKLEKAKTAWRKFVICFR 98
          IPRRVFLDSP+DVCSGYEVLSKLEKAKTAWRKFVICFR
Sbjct: 61 IPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR 98

BLAST of Cp4.1LG01g00660 vs. NCBI nr
Match: XP_022942868.1 (uncharacterized protein LOC111447770 [Cucurbita moschata])

HSP 1 Score: 195 bits (496), Expect = 1.51e-62
Identity = 95/98 (96.94%), Postives = 97/98 (98.98%), Query Frame = 0

Query: 1  MPISTESSTPSSSCFIECGTPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP 60
          MPISTESSTPSSSCFI+C TPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP
Sbjct: 1  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP 60

Query: 61 IPRRVFLDSPVDVCSGYEVLSKLEKAKTAWRKFVICFR 98
          IPRRVFLDSP+DVCSGYEVLSKLEKAKTAWRKFVICFR
Sbjct: 61 IPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR 98

BLAST of Cp4.1LG01g00660 vs. NCBI nr
Match: KAG6600501.1 (hypothetical protein SDJN03_05734, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 192 bits (488), Expect = 1.34e-60
Identity = 94/98 (95.92%), Postives = 95/98 (96.94%), Query Frame = 0

Query: 1  MPISTESSTPSSSCFIECGTPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP 60
          MPISTESSTPSSSCFIEC  PTIPSVQLVSKSVSDRLLGKFF ASQFDFDYEQSSLWSPP
Sbjct: 1  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFHASQFDFDYEQSSLWSPP 60

Query: 61 IPRRVFLDSPVDVCSGYEVLSKLEKAKTAWRKFVICFR 98
          IPRRVFLDSP+DVCSGYEVLSKLEKAKTAWRKFVICFR
Sbjct: 61 IPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR 98

BLAST of Cp4.1LG01g00660 vs. ExPASy TrEMBL
Match: A0A6J1J7J0 (uncharacterized protein LOC111482071 OS=Cucurbita maxima OX=3661 GN=LOC111482071 PE=4 SV=1)

HSP 1 Score: 197 bits (500), Expect = 1.79e-63
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0

Query: 1  MPISTESSTPSSSCFIECGTPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP 60
          MPISTESSTPSSSCFIEC TPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP
Sbjct: 1  MPISTESSTPSSSCFIECATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP 60

Query: 61 IPRRVFLDSPVDVCSGYEVLSKLEKAKTAWRKFVICFR 98
          IPRRVFLDSP+DVCSGYEVLSKLEKAKTAWRKFVICFR
Sbjct: 61 IPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR 98

BLAST of Cp4.1LG01g00660 vs. ExPASy TrEMBL
Match: A0A6J1FVV1 (uncharacterized protein LOC111447770 OS=Cucurbita moschata OX=3662 GN=LOC111447770 PE=4 SV=1)

HSP 1 Score: 195 bits (496), Expect = 7.31e-63
Identity = 95/98 (96.94%), Postives = 97/98 (98.98%), Query Frame = 0

Query: 1  MPISTESSTPSSSCFIECGTPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP 60
          MPISTESSTPSSSCFI+C TPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP
Sbjct: 1  MPISTESSTPSSSCFIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP 60

Query: 61 IPRRVFLDSPVDVCSGYEVLSKLEKAKTAWRKFVICFR 98
          IPRRVFLDSP+DVCSGYEVLSKLEKAKTAWRKFVICFR
Sbjct: 61 IPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR 98

BLAST of Cp4.1LG01g00660 vs. ExPASy TrEMBL
Match: A0A6J1CMP9 (uncharacterized protein LOC111012878 OS=Momordica charantia OX=3673 GN=LOC111012878 PE=4 SV=1)

HSP 1 Score: 166 bits (419), Expect = 4.30e-51
Identity = 83/100 (83.00%), Postives = 89/100 (89.00%), Query Frame = 0

Query: 1   MPIS--TESSTPSSSCFIECGTPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60
           MPIS  + SS+ SSS F+EC +PT PSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS
Sbjct: 1   MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPVDVCSGYEVLSKLEKAKTAWRKFVICFR 98
           PPIPRRVFLDSP +VCSGYEV SKL+ AK AWRKFVICFR
Sbjct: 61  PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFR 100

BLAST of Cp4.1LG01g00660 vs. ExPASy TrEMBL
Match: A0A6J1EYJ9 (uncharacterized protein LOC111437603 OS=Cucurbita moschata OX=3662 GN=LOC111437603 PE=4 SV=1)

HSP 1 Score: 152 bits (384), Expect = 9.90e-46
Identity = 74/94 (78.72%), Postives = 80/94 (85.11%), Query Frame = 0

Query: 4   STESSTPSSSCFIECGTPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPR 63
           S+ SS+ SSS F++C TP   SVQLVSK  SDRLLGKFFDAS+FDFDYEQSSLWSPPIPR
Sbjct: 11  SSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPR 70

Query: 64  RVFLDSPVDVCSGYEVLSKLEKAKTAWRKFVICF 97
           RVFLDSP DVCSGYEVLSKLE AK AWRK + CF
Sbjct: 71  RVFLDSPADVCSGYEVLSKLENAKKAWRKLITCF 104

BLAST of Cp4.1LG01g00660 vs. ExPASy TrEMBL
Match: A0A0A0KVF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G082960 PE=4 SV=1)

HSP 1 Score: 150 bits (378), Expect = 9.78e-45
Identity = 75/102 (73.53%), Postives = 86/102 (84.31%), Query Frame = 0

Query: 1   MPISTESSTPSSSCFIECGTPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPP 60
           MPIS  SS+  SS F++C TPT P++Q+VSKS SDRLL KFFDAS+FDFDY QSSLWSPP
Sbjct: 1   MPISLHSSSSPSSSFLQCLTPTSPTIQIVSKSASDRLLAKFFDASKFDFDYLQSSLWSPP 60

Query: 61  IPRRVFLDSPVDVCSGYEV-LSKLEKAKTAWRKFVICFRVSA 101
           I RR+FLDSP DVCSG +V LSKLE AK AWRKF+ICFRVS+
Sbjct: 61  IQRRLFLDSPADVCSGSKVVLSKLENAKKAWRKFIICFRVSS 102

BLAST of Cp4.1LG01g00660 vs. TAIR 10
Match: AT4G15140.1 (unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.2e-04
Identity = 23/51 (45.10%), Postives = 28/51 (54.90%), Query Frame = 0

Query: 22 TIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPVD 73
          T   V+ +   +   LL KF D S F FDY QSSLWSP +PR     S +D
Sbjct: 21 TTKVVEYLQPVMCRELLCKFPDNSAFGFDYSQSSLWSPLLPRNYASPSDLD 71

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG7031141.15.68e-6797.17hypothetical protein SDJN02_05180, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023516499.11.57e-64100.00uncharacterized protein LOC111780353 [Cucurbita pepo subsp. pepo][more]
XP_022983484.13.70e-6397.96uncharacterized protein LOC111482071 [Cucurbita maxima][more]
XP_022942868.11.51e-6296.94uncharacterized protein LOC111447770 [Cucurbita moschata][more]
KAG6600501.11.34e-6095.92hypothetical protein SDJN03_05734, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1J7J01.79e-6397.96uncharacterized protein LOC111482071 OS=Cucurbita maxima OX=3661 GN=LOC111482071... [more]
A0A6J1FVV17.31e-6396.94uncharacterized protein LOC111447770 OS=Cucurbita moschata OX=3662 GN=LOC1114477... [more]
A0A6J1CMP94.30e-5183.00uncharacterized protein LOC111012878 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A6J1EYJ99.90e-4678.72uncharacterized protein LOC111437603 OS=Cucurbita moschata OX=3662 GN=LOC1114376... [more]
A0A0A0KVF59.78e-4573.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G082960 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G15140.11.2e-0445.10unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34287OS06G0551500 PROTEIN-RELATEDcoord: 1..99
NoneNo IPR availablePANTHERPTHR34287:SF12SUBFAMILY NOT NAMEDcoord: 1..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g00660.1Cp4.1LG01g00660.1mRNA