Cp4.1LG00g01570 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG00g01570
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CRIB domain-containing protein RIC4
Location	Cp4.1LG00: 3859891 .. 3861357 (-)
RNA-Seq Expression	Cp4.1LG00g01570
Synteny	Cp4.1LG00g01570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGTTCTTTCGATGAACAACAATGAGACGTAAAATGGAGAGATTTGTTCTTCTTCCTTTCTCGATCGGATGCATCTCCGAGTCAAGCGTGGCCGTGGGGATTCAACGTAATGCAACATCCAAACCCACCGACCCTAATTCGTCTCCTCGATCAAGTCCTTTCTCGAACTCTCTCTCTTTCGTTCTTCGCTGGTTATTACGAGCTTGTTTGATATCTTATCCCGTTCGAGTTTTTCGTGAATCGATCGAATGGCTAATTTTTGTATGGGTTTTGTATTGAAGGTGAGAAAGATGAAATGGTATTAGAAGAAAGTTTGAAGAACTCACAGAGATTCACACCACTTGCAAAGCCTAATATAGGAGTTGGATTTCATAGGCTTTACAAAGGTTTCAAGAATTTCTCTCAATTATTTGGTGAGTTCTATTTTTTTTTAATTGAAAAAAGAAATTAAAATATTTACTTCTCCGTGTTATTCGGAAGGTTCGTGGGTCAGTTGGGTCTGCTCGAGTTTAGACATTTTTCTTAGATCAACCCAATTGTTGGGTTGGTTCTTCGTAAGCAAAAATGTATATTTTAAAATGAAACAATAAATTCGGGTCGATTCAATTCAACCCAGCTTAGTTTTACGAGAACCCTAACCAACCCAATCTATAAAATTTTCATTTATTTGAACGTGATCCAAGCCTACCACTAGCAGATATTGTCCACTTTAGCTCGTTACATATAGTCATGAGTCTCATGGTTTTAAAACATGTCTGTTAGAGAGAAGTGTCCACGCCCTTACAACATATGCTTCGTTCCCCTCTCCAACCGACGTGAAATCTCACAAATAAGTTCCAGACCCAACCCAAACCCTACGAAATGAATTGGGTTGCTCGAGTTTTATGAATCATCGAGTTTTTTCTAAATTATCTCGTCATTATTTCTAAATTCTAATTATTTTTTTGTTTTTTTTTTTTTTTTGGTAATGATATTATTTTGGGAAGTGTACAAAGAGGAGATGGAAGAAATGGAAGAAATGGAAGTAGGATGTCCCACAGATGTGAAGCATTTGACCCACATCGGTTGCGATGCCACCACAATATCAGATGACCCCAACAATCCCTTCATAGATTGGGAAACTCTTCTAGCTTCCGGCCTCTTCTCTCTTCCCTCTTCTCGTTCTTGGACCGAACTCGAACTCGATCATCATCTTTCAAACCCTAATGTTCTACCTCATTCTATTTGAAAACCAAAAACGTATGTTAAAAAAGCTCGTGTTGATTCGATGTATAATTTCTTATCTATAAAATAACTCGACATGTTACGTGGCTTATTCGTTTATAATTGTTGTAAGGAATGTTGGGGCGTTAATGTAATGGATCAAGCGTCAAATTCAGATTTTCAATCGGTTTGAGGCTCAACAGATATAGAAGGTGGTAGGCTGGTCAGTTTACGGAGGGATAAACTCCATCGTCGTGTGACGA

mRNA sequence

AGGGTTCTTTCGATGAACAACAATGAGACGTAAAATGGAGAGATTTGTTCTTCTTCCTTTCTCGATCGGATGCATCTCCGAGTCAAGCGTGGCCGTGGGGATTCAACGTAATGCAACATCCAAACCCACCGACCCTAATTCGTCTCCTCGATCAAGTGAGAAAGATGAAATGGTATTAGAAGAAAGTTTGAAGAACTCACAGAGATTCACACCACTTGCAAAGCCTAATATAGGAGTTGGATTTCATAGGCTTTACAAAGGTTTCAAGAATTTCTCTCAATTATTTGTGTACAAAGAGGAGATGGAAGAAATGGAAGAAATGGAAGTAGGATGTCCCACAGATGTGAAGCATTTGACCCACATCGGTTGCGATGCCACCACAATATCAGATGACCCCAACAATCCCTTCATAGATTGGGAAACTCTTCTAGCTTCCGGCCTCTTCTCTCTTCCCTCTTCTCGTTCTTGGACCGAACTCGAACTCGATCATCATCTTTCAAACCCTAATGTTCTACCTCATTCTATTTGAAAACCAAAAACGTATGTTAAAAAAGCTCGTGTTGATTCGATGTATAATTTCTTATCTATAAAATAACTCGACATGTTACGTGGCTTATTCGTTTATAATTGTTGTAAGGAATGTTGGGGCGTTAATGTAATGGATCAAGCGTCAAATTCAGATTTTCAATCGGTTTGAGGCTCAACAGATATAGAAGGTGGTAGGCTGGTCAGTTTACGGAGGGATAAACTCCATCGTCGTGTGACGA

Coding sequence (CDS)

ATGAGACGTAAAATGGAGAGATTTGTTCTTCTTCCTTTCTCGATCGGATGCATCTCCGAGTCAAGCGTGGCCGTGGGGATTCAACGTAATGCAACATCCAAACCCACCGACCCTAATTCGTCTCCTCGATCAAGTGAGAAAGATGAAATGGTATTAGAAGAAAGTTTGAAGAACTCACAGAGATTCACACCACTTGCAAAGCCTAATATAGGAGTTGGATTTCATAGGCTTTACAAAGGTTTCAAGAATTTCTCTCAATTATTTGTGTACAAAGAGGAGATGGAAGAAATGGAAGAAATGGAAGTAGGATGTCCCACAGATGTGAAGCATTTGACCCACATCGGTTGCGATGCCACCACAATATCAGATGACCCCAACAATCCCTTCATAGATTGGGAAACTCTTCTAGCTTCCGGCCTCTTCTCTCTTCCCTCTTCTCGTTCTTGGACCGAACTCGAACTCGATCATCATCTTTCAAACCCTAATGTTCTACCTCATTCTATTTGA

Protein sequence

MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTPLAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNPNVLPHSI

Homology

[Close]

BLAST of Cp4.1LG00g01570 vs. ExPASy Swiss-Prot
Match: Q9FFD5 (CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana OX=3702 GN=RIC4 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-21
Identity = 68/161 (42.24%), Postives = 98/161 (60.87%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MR +MER V+LPFSIGCIS SSVAV    +  SKP   +S     E++E   E+++KN  
Sbjct: 1   MRDRMERLVVLPFSIGCISVSSVAV---LSPLSKPHHHHSRQVIREQEE---EDNMKNVF 60

Query: 61  RFTPLAKPNIGVGFHRLYKGFKNFSQLFVYK-EEMEEMEE--MEVGCPTDVKHLTHIGCD 120
           +F  ++KP I +G +R++K FK  SQLF  K EE EE+E   ME+G PT+VKH++HIG +
Sbjct: 61  KFLAVSKPEISIGINRIFKSFKTISQLFADKDEEKEEVETSGMEIGVPTNVKHVSHIGWE 120

Query: 121 ATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHL 159
           +   +     P   WE L+   L +  +S+     E++ HL
Sbjct: 121 SGLTA--ATGPGKGWEDLIPPELLAAAASKK----EINPHL 149

[Close]

BLAST of Cp4.1LG00g01570 vs. ExPASy Swiss-Prot
Match: Q8GYU0 (CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana OX=3702 GN=RIC2 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.7e-09
Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 69  NIGVGFHRLYKGFKNFSQLFV-YKEEMEEME-EMEVGCPTDVKHLTHIGCDAT-TISDDP 128
           NI  G +R+ + FK+FS  F+ Y+EE +E E EME+G PTDVKHL+HIG D T T  D+ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

Query: 129 NNPF 130
           ++ F
Sbjct: 96  SSSF 99

[Close]

BLAST of Cp4.1LG00g01570 vs. ExPASy Swiss-Prot
Match: Q1G3Y0 (CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana OX=3702 GN=RIC9 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.8e-05
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 74  FHRLY-KGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATTIS 123
           F  LY K FK FS +F    ++EE EEME+G PTDV+H++HIG D+++ S
Sbjct: 5   FKGLYNKSFKCFSDIF----DVEEEEEMEIGYPTDVRHVSHIGWDSSSSS 50

[Close]

BLAST of Cp4.1LG00g01570 vs. ExPASy Swiss-Prot
Match: Q9M0Y9 (CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.4e-04
Identity = 21/44 (47.73%), Postives = 32/44 (72.73%), Query Frame = 0


Query: 77  LYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 121
           +YKGFK  SQ+F  +   +E +E+E+G PTDVKH+ HIG + ++
Sbjct: 8   IYKGFKCISQIFAVE---KERDEIEIGFPTDVKHVAHIGWEGSS 48

[Close]

BLAST of Cp4.1LG00g01570 vs. ExPASy Swiss-Prot
Match: Q1G3K8 (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 9.4e-04
Identity = 25/52 (48.08%), Postives = 32/52 (61.54%), Query Frame = 0


Query: 77  LYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATTISDDPNNP 129
           L KG +  SQ+F  + E E  EEM++G PTDVKH+ HIG D    SD+   P
Sbjct: 13  LLKGLRYISQVFAIEGEKE--EEMQIGNPTDVKHVAHIGWDGP--SDNATAP 60

[Close]

BLAST of Cp4.1LG00g01570 vs. NCBI nr
Match: XP_023520680.1 (CRIB domain-containing protein RIC4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345 bits (884), Expect = 1.02e-119
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60

Query: 61  RFTPLAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120
           RFTPLAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT
Sbjct: 61  RFTPLAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120

Query: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNPNVLPHSI 168
           ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNPNVLPHSI
Sbjct: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNPNVLPHSI 168

[Close]

BLAST of Cp4.1LG00g01570 vs. NCBI nr
Match: XP_022933781.1 (CRIB domain-containing protein RIC4 [Cucurbita moschata])

HSP 1 Score: 342 bits (876), Expect = 1.70e-118
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60

Query: 61  RFTPLAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120
           RFT LAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT
Sbjct: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120

Query: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNPNVLPHSI 168
           ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNPNVLPHSI
Sbjct: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNPNVLPHSI 168

[Close]

BLAST of Cp4.1LG00g01570 vs. NCBI nr
Match: KAG6588282.1 (CRIB domain-containing protein RIC4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 337 bits (863), Expect = 1.75e-116
Identity = 167/170 (98.24%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60

Query: 61  RFTPLAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120
           RFT LAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT
Sbjct: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120

Query: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELEL--DHHLSNPNVLPHSI 168
           ISDDPNNPFIDWETLLASGLFSLPSSRSWTELEL  DHHLSNPNVLPHSI
Sbjct: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI 170

[Close]

BLAST of Cp4.1LG00g01570 vs. NCBI nr
Match: XP_023006430.1 (CRIB domain-containing protein RIC4 [Cucurbita maxima])

HSP 1 Score: 333 bits (853), Expect = 5.48e-115
Identity = 164/168 (97.62%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKN Q
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNLQ 60

Query: 61  RFTPLAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120
           RFT LAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT
Sbjct: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120

Query: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNPNVLPHSI 168
           ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELD HLSN NVLPHSI
Sbjct: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDDHLSNSNVLPHSI 168

[Close]

BLAST of Cp4.1LG00g01570 vs. NCBI nr
Match: KAG7022201.1 (CRIB domain-containing protein RIC4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325 bits (834), Expect = 4.18e-112
Identity = 164/170 (96.47%), Postives = 164/170 (96.47%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60

Query: 61  RFTPLAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120
           RFT LAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEME   VGCPTDVKHLTHIGCDATT
Sbjct: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEME---VGCPTDVKHLTHIGCDATT 120

Query: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELEL--DHHLSNPNVLPHSI 168
           ISDDPNNPFIDWETLLASGLFSLPSSRSWTELEL  DHHLSNPNVLPHSI
Sbjct: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI 167

[Close]

BLAST of Cp4.1LG00g01570 vs. ExPASy TrEMBL
Match: A0A6J1F000 (CRIB domain-containing protein RIC4 OS=Cucurbita moschata OX=3662 GN=LOC111441091 PE=4 SV=1)

HSP 1 Score: 342 bits (876), Expect = 8.24e-119
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60

Query: 61  RFTPLAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120
           RFT LAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT
Sbjct: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120

Query: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNPNVLPHSI 168
           ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNPNVLPHSI
Sbjct: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNPNVLPHSI 168

[Close]

BLAST of Cp4.1LG00g01570 vs. ExPASy TrEMBL
Match: A0A6J1L039 (CRIB domain-containing protein RIC4 OS=Cucurbita maxima OX=3661 GN=LOC111499156 PE=4 SV=1)

HSP 1 Score: 333 bits (853), Expect = 2.65e-115
Identity = 164/168 (97.62%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKN Q
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNLQ 60

Query: 61  RFTPLAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120
           RFT LAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT
Sbjct: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120

Query: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNPNVLPHSI 168
           ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELD HLSN NVLPHSI
Sbjct: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDDHLSNSNVLPHSI 168

[Close]

BLAST of Cp4.1LG00g01570 vs. ExPASy TrEMBL
Match: A0A1S3B9E6 (CRIB domain-containing protein RIC4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487233 PE=4 SV=1)

HSP 1 Score: 221 bits (562), Expect = 6.65e-71
Identity = 124/182 (68.13%), Postives = 133/182 (73.08%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDE---------MV 60
           MRRKMER VLLPFS+GCISE+SVAVGIQ N+T+    P SSP SSEKDE           
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCERS 60

Query: 61  LEESLKNSQRFTPLAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEME-EMEVGCPTDVKH 120
           LEESLKNSQRFT LAKPNIGVGFHRLYKGFKN SQLFVYKEEMEEME EME+G PTDVKH
Sbjct: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKH 120

Query: 121 LTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNP----NVLPH 168
           +THIGCDAT  S+D  N FI WETLLAS         SW +   D  LSNP    N+L H
Sbjct: 121 VTHIGCDATARSEDAANSFIAWETLLASS--------SWRQF--DDQLSNPKHLPNILGH 172

[Close]

BLAST of Cp4.1LG00g01570 vs. ExPASy TrEMBL
Match: A0A0A0LY31 (CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G658520 PE=4 SV=1)

HSP 1 Score: 218 bits (556), Expect = 5.27e-70
Identity = 124/182 (68.13%), Postives = 134/182 (73.63%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDE---------MV 60
           MRRKMER VLLPFS+GCISE+SVAVGIQ N+T+    P SSP SSEKDE          +
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESL 60

Query: 61  LEESLKNSQRFTPLAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEME-EMEVGCPTDVKH 120
           LEESLKNSQRFT LAKPNIGVGFHRLYKGFKN SQLFVYKEEMEEME EME+G PTDVKH
Sbjct: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKH 120

Query: 121 LTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNP----NVLPH 168
           +THIGCDATT  +D  N FI WETLLAS         SW +   D  LSNP    N+L H
Sbjct: 121 VTHIGCDATT-REDAANSFIAWETLLASS--------SWRQF--DDQLSNPKHLPNILGH 171

[Close]

BLAST of Cp4.1LG00g01570 vs. ExPASy TrEMBL
Match: A0A1S3B8Q2 (CRIB domain-containing protein RIC4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487233 PE=4 SV=1)

HSP 1 Score: 214 bits (546), Expect = 1.87e-68
Identity = 123/183 (67.21%), Postives = 132/183 (72.13%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSS-EKDE---------M 60
           MRRKMER VLLPFS+GCISE+SVAVGIQ N+T+    P SSP S  EKDE          
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCER 60

Query: 61  VLEESLKNSQRFTPLAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEME-EMEVGCPTDVK 120
            LEESLKNSQRFT LAKPNIGVGFHRLYKGFKN SQLFVYKEEMEEME EME+G PTDVK
Sbjct: 61  SLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120

Query: 121 HLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNP----NVLP 168
           H+THIGCDAT  S+D  N FI WETLLAS         SW +   D  LSNP    N+L 
Sbjct: 121 HVTHIGCDATARSEDAANSFIAWETLLASS--------SWRQF--DDQLSNPKHLPNILG 173

[Close]

BLAST of Cp4.1LG00g01570 vs. TAIR 10
Match: AT5G16490.1 (ROP-interactive CRIB motif-containing protein 4 )

HSP 1 Score: 103.6 bits (257), Expect = 1.6e-22
Identity = 68/161 (42.24%), Postives = 98/161 (60.87%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MR +MER V+LPFSIGCIS SSVAV    +  SKP   +S     E++E   E+++KN  
Sbjct: 1   MRDRMERLVVLPFSIGCISVSSVAV---LSPLSKPHHHHSRQVIREQEE---EDNMKNVF 60

Query: 61  RFTPLAKPNIGVGFHRLYKGFKNFSQLFVYK-EEMEEMEE--MEVGCPTDVKHLTHIGCD 120
           +F  ++KP I +G +R++K FK  SQLF  K EE EE+E   ME+G PT+VKH++HIG +
Sbjct: 61  KFLAVSKPEISIGINRIFKSFKTISQLFADKDEEKEEVETSGMEIGVPTNVKHVSHIGWE 120

Query: 121 ATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHL 159
           +   +     P   WE L+   L +  +S+     E++ HL
Sbjct: 121 SGLTA--ATGPGKGWEDLIPPELLAAAASKK----EINPHL 149

[Close]

BLAST of Cp4.1LG00g01570 vs. TAIR 10
Match: AT1G27380.2 (ROP-interactive CRIB motif-containing protein 2 )

HSP 1 Score: 62.4 bits (150), Expect = 4.0e-10
Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 69  NIGVGFHRLYKGFKNFSQLFV-YKEEMEEME-EMEVGCPTDVKHLTHIGCDAT-TISDDP 128
           NI  G +R+ + FK+FS  F+ Y+EE +E E EME+G PTDVKHL+HIG D T T  D+ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

Query: 129 NNPF 130
           ++ F
Sbjct: 96  SSSF 99

[Close]

BLAST of Cp4.1LG00g01570 vs. TAIR 10
Match: AT1G27380.1 (ROP-interactive CRIB motif-containing protein 2 )

HSP 1 Score: 62.4 bits (150), Expect = 4.0e-10
Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 69  NIGVGFHRLYKGFKNFSQLFV-YKEEMEEME-EMEVGCPTDVKHLTHIGCDAT-TISDDP 128
           NI  G +R+ + FK+FS  F+ Y+EE +E E EME+G PTDVKHL+HIG D T T  D+ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

Query: 129 NNPF 130
           ++ F
Sbjct: 96  SSSF 99

[Close]

BLAST of Cp4.1LG00g01570 vs. TAIR 10
Match: AT1G61795.1 (PAK-box/P21-Rho-binding family protein )

HSP 1 Score: 49.7 bits (117), Expect = 2.7e-06
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 74  FHRLY-KGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATTIS 123
           F  LY K FK FS +F    ++EE EEME+G PTDV+H++HIG D+++ S
Sbjct: 5   FKGLYNKSFKCFSDIF----DVEEEEEMEIGYPTDVRHVSHIGWDSSSSS 50

[Close]

BLAST of Cp4.1LG00g01570 vs. TAIR 10
Match: AT4G04900.1 (ROP-interactive CRIB motif-containing protein 10 )

HSP 1 Score: 47.8 bits (112), Expect = 1.0e-05
Identity = 21/44 (47.73%), Postives = 32/44 (72.73%), Query Frame = 0


Query: 77  LYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 121
           +YKGFK  SQ+F  +   +E +E+E+G PTDVKH+ HIG + ++
Sbjct: 8   IYKGFKCISQIFAVE---KERDEIEIGFPTDVKHVAHIGWEGSS 48

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g01570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFD5	2.2e-21	42.24	CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana OX=3702 GN=RIC4 PE=1...	[more]
Q8GYU0	5.7e-09	51.56	CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana OX=3702 GN=RIC2 PE=1...	[more]
Q1G3Y0	3.8e-05	52.00	CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana OX=3702 GN=RIC9 PE=1...	[more]
Q9M0Y9	1.4e-04	47.73	CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE...	[more]
Q1G3K8	9.4e-04	48.08	CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1...	[more]

BLAST of Cp4.1LG00g01570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520680.1	1.02e-119	100.00	CRIB domain-containing protein RIC4 [Cucurbita pepo subsp. pepo]	[more]
XP_022933781.1	1.70e-118	99.40	CRIB domain-containing protein RIC4 [Cucurbita moschata]	[more]
KAG6588282.1	1.75e-116	98.24	CRIB domain-containing protein RIC4, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_023006430.1	5.48e-115	97.62	CRIB domain-containing protein RIC4 [Cucurbita maxima]	[more]
KAG7022201.1	4.18e-112	96.47	CRIB domain-containing protein RIC4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG00g01570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F000	8.24e-119	99.40	CRIB domain-containing protein RIC4 OS=Cucurbita moschata OX=3662 GN=LOC11144109...	[more]
A0A6J1L039	2.65e-115	97.62	CRIB domain-containing protein RIC4 OS=Cucurbita maxima OX=3661 GN=LOC111499156 ...	[more]
A0A1S3B9E6	6.65e-71	68.13	CRIB domain-containing protein RIC4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0LY31	5.27e-70	68.13	CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G658520 PE=4 S...	[more]
A0A1S3B8Q2	1.87e-68	67.21	CRIB domain-containing protein RIC4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Cp4.1LG00g01570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16490.1	1.6e-22	42.24	ROP-interactive CRIB motif-containing protein 4	[more]
AT1G27380.2	4.0e-10	51.56	ROP-interactive CRIB motif-containing protein 2	[more]
AT1G27380.1	4.0e-10	51.56	ROP-interactive CRIB motif-containing protein 2	[more]
AT1G61795.1	2.7e-06	52.00	PAK-box/P21-Rho-binding family protein	[more]
AT4G04900.1	1.0e-05	47.73	ROP-interactive CRIB motif-containing protein 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 101..136 e-value: 1.6E-4 score: 22.0
IPR000095	CRIB domain	PROSITE	PS50108	CRIB	coord: 102..115 score: 8.307275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..53
None	No IPR available	PANTHER	PTHR46931:SF6	CRIB DOMAIN-CONTAINING PROTEIN RIC4	coord: 1..155
IPR044509	CRIB domain-containing protein RIC2/4	PANTHER	PTHR46931	CRIB DOMAIN-CONTAINING PROTEIN RIC2	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g01570.1	Cp4.1LG00g01570.1	mRNA