Cp4.1LG00g01430 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG00g01430
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Flowering locus T-like protein
Location	Cp4.1LG00: 3714676 .. 3717236 (-)
RNA-Seq Expression	Cp4.1LG00g01430
Synteny	Cp4.1LG00g01430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACCAGACAATTACACATCTTTTCAGCTCTCTCTCACGTACATCAATACCCAACCTACCATCCTTTCGACGCCATGCCGAGAGACCGTGACCCTTTGGTCGTCGGGAGAGTCATCGGCGACGTTATCGACTCGTTCACGAGGTCCATTTCGATTAGGGCTACTTACAACAATAGGGAAATTAGCAATGGGTGTGAGCTCAAACCCTCTCAAGTTGTCAACCAGCCAAGAGTTGAGATTGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTAAATCCTTTGTTTTTACTTTTTCACTTTCTTGGCCATGCATGTTTTTTACCCTTTCATTTCACTTTGTTTGCTATAGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTGACCCTAATCTAAGGGAATACTTGCATTGGTAAGTCCATTTTTTTTTTACCTTTTCACTCTAATTTTTTTTTACGGTGTCGAGAGGTCATCATAATACAATCGACAATTTTACACCGTTAAATGTGAAACAAAAAATTTGTACGTCTCCTTCACTTTTGCATCCTATGATTATTAAAACGCAAACATTTTTTTGATATATATATATATATATAAATATATATATATATATATATATATATATATAATCGTTATTAAGAGTTGGCCACGTTGTGGCGACCTCATTGAATAATTTTTCATCATGGGTAATTTTTCTTTTTACTTTTTCCGAGAAAGGTAACCTATTTTTTTCCAAAACAGAAATCATTCTTTCTAATAACTAACCGTCCATACGTACATTTTTACCTGATCATGACGATTTTTTTTTTTATAGATTGAAAGTTTAAATTTTTAATGTTAATAATAATTTTTAAGCATTATTATATTTTAAATATAATAAGGTAAAGAATTGAACCATCGATTTTTAGGAGGTAAATTAGTGTCTTATCCAATAAGATATGTTCGAATAGAATCATAGATGTCTCTAGAATTGGAGATTGTCAGTGTCCTTTCGTGAATTAAATGGATAGTTTCGGGGACACGTGCCCCTTTAACTCCAACGTGGATCCGTCCCGATGTAAATGTATATAATTGTTTCGGTTCGATTTGCAGGTTGGTGACTGATATCCCCGCTACAACTGGAGCGACCTTTGGTATGTTATCTTTATGTTTCTAAACACTTTGTTTATAGAATTTGTTTATGTCGTCAAGTTTATTAAAAGTTTGATAGGGATGCCTCCATAACCTTATATATTCCTTACCATTATTAAAGTACTTTGAGAAAGAGATCCCGAAAAAATATTAAATTAGCTTTTTCTCCCGTCAATTTCTAATATTACGAGTATGAATCTGTGCACACTCTTCCAAATGTGAGATCCACATCAGTTGGAGAGAGAAATGAAACATTGAGGGTGGAAATCTCTCCCTAGTAGATGCGTTTTAAAACGGTGAGACTGATGACAATACGTAACGGGTTAAAGTGAACAATATCTGGCGGTGGGCTTGGACTGTTACAAATAGTATCAAAGTCCGTCTCCGAGCGGTGTACCAACGAGGACGTTGGGTCTCCAAGGGGGATTTGTGAGTTCCCACCTTGGTTGGAGAGGGGAACAAAACATACTTAAGGTGTGGAAACCTCTACCCAGCATACGTGTTCTAAAACCAAGAGGCTAACGACGACACGTAACGGGATAAAACGAACAATATGTACCAGCGGTGGGCTTGGACTGTTACAAATGGTATCAAACCCCCATCACTGAGCAGTGTGCCAGTGAGGACATTGGGTCTCCAAGGGTGATTTGTGAGATCCCACGTCGATTAGGAAGGAGAACGAAACATTCTTTATAAAAGTGCGTAAACTTCTCCCTAGCAGACGCGTTTCAAAACCGTGAAGCTGGCGGTGATACGTAACAGGCTAAAGTGGACAATCTGGATTATTACAAATGGTATCAAAACCCATCACCGAGCGGTATACTTCGAGGACGCTAGGTCTCCACGGGGGATGGATCGTGAGATCCAGCAGCCTTTCCCCAACAGACGCATTAGTCATAAATTCTAGTTTCTTCTTTTCTCGAGTTTAATGTCCCGTGAAAACATAGGACTTAAACCGACTCCGACATCTTAGTTATACATATATTAATCGATATTCATTTGTGGTTGGAACAATGGTAGGTCAAGAGATCGTGTGCTATGAGAGCCCAAGGCCAACGGTGGGTATCCATCGTCTGGTGCTGGTGTTGTTTCGACAGCTTGGAAGGCAAACGGTGTACGCTCCTGGGTGGCGCCAGAACTTCAACACAAGAGACTTTGCAGAGCTTTACAATCTAGGCTTGCCGGTGGCAGCCGTTTATTTCAATTGCCAAAGGGAAAGTGGGTCTGGTGGAAGGAGAAGAAGCCAAGATGATTTCTAAGTCCCCACTTCACATTAATTAGATTAATATTATAGCCCCTATCATCTATTAATCCTACCTTGCTTTTAGATTAACCTTTATTTTGGATCATAAATAAGCCCAAATGCATACCTAAATATTGCTCTTATACTATATATTATAATATTATATATATAATATGATCGTTTCGT

mRNA sequence

TCACCAGACAATTACACATCTTTTCAGCTCTCTCTCACGTACATCAATACCCAACCTACCATCCTTTCGACGCCATGCCGAGAGACCGTGACCCTTTGGTCGTCGGGAGAGTCATCGGCGACGTTATCGACTCGTTCACGAGGTCCATTTCGATTAGGGCTACTTACAACAATAGGGAAATTAGCAATGGGTGTGAGCTCAAACCCTCTCAAGTTGTCAACCAGCCAAGAGTTGAGATTGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTCAAGAGATCGTGTGCTATGAGAGCCCAAGGCCAACGGTGGGTATCCATCGTCTGGTGCTGGTGTTGTTTCGACAGCTTGGAAGGCAAACGGTGTACGCTCCTGGGTGGCGCCAGAACTTCAACACAAGAGACTTTGCAGAGCTTTACAATCTAGGCTTGCCGGTGGCAGCCGTTTATTTCAATTGCCAAAGGGAAAGTGGGTCTGGTGGAAGGAGAAGAAGCCAAGATGATTTCTAAGTCCCCACTTCACATTAATTAGATTAATATTATAGCCCCTATCATCTATTAATCCTACCTTGCTTTTAGATTAACCTTTATTTTGGATCATAAATAAGCCCAAATGCATACCTAAATATTGCTCTTATACTATATATTATAATATTATATATATAATATGATCGTTTCGT

Coding sequence (CDS)

ATGCCGAGAGACCGTGACCCTTTGGTCGTCGGGAGAGTCATCGGCGACGTTATCGACTCGTTCACGAGGTCCATTTCGATTAGGGCTACTTACAACAATAGGGAAATTAGCAATGGGTGTGAGCTCAAACCCTCTCAAGTTGTCAACCAGCCAAGAGTTGAGATTGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTCAAGAGATCGTGTGCTATGAGAGCCCAAGGCCAACGGTGGGTATCCATCGTCTGGTGCTGGTGTTGTTTCGACAGCTTGGAAGGCAAACGGTGTACGCTCCTGGGTGGCGCCAGAACTTCAACACAAGAGACTTTGCAGAGCTTTACAATCTAGGCTTGCCGGTGGCAGCCGTTTATTTCAATTGCCAAAGGGAAAGTGGGTCTGGTGGAAGGAGAAGAAGCCAAGATGATTTCTAA

Protein sequence

MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFFTLVMVDPDAPSPSQEIVCYESPRPTVGIHRLVLVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF

Homology

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BLAST of Cp4.1LG00g01430 vs. ExPASy Swiss-Prot
Match: Q93WI9 (Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.7e-66
Identity = 118/171 (69.01%), Postives = 137/171 (80.12%), Query Frame = 0


Query: 3   RDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRT 62
           RDRDPLVVGRV+GDV+D+F RS +++ TY ++ +SNGCELKPS V +QPRVE+GG D+RT
Sbjct: 6   RDRDPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDMRT 65

Query: 63  FFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLVLV 122
           F+TLVMVDPDAPSPS                        QE++CYESPRPT+GIHRLV V
Sbjct: 66  FYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFV 125

Query: 123 LFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 150
           LF+QLGRQTVYAPGWRQNFNT+DFAELYNLG PVAAVYFNCQRE+GSGGRR
Sbjct: 126 LFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGRR 176

[Close]

BLAST of Cp4.1LG00g01430 vs. ExPASy Swiss-Prot
Match: Q9SXZ2 (Protein FLOWERING LOCUS T OS=Arabidopsis thaliana OX=3702 GN=FT PE=1 SV=2)

HSP 1 Score: 235.0 bits (598), Expect = 5.9e-61
Identity = 110/169 (65.09%), Postives = 129/169 (76.33%), Query Frame = 0


Query: 5   RDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPL+V RV+GDV+D F RSI+++ TY  RE++NG +L+PSQV N+PRVEIGG DLR F+
Sbjct: 6   RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 65

Query: 65  TLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS                         EIVCYE+P PT GIHR+V +LF
Sbjct: 66  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 150
           RQLGRQTVYAPGWRQNFNTR+FAE+YNLGLPVAAV++NCQRESG GGRR
Sbjct: 126 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRR 174

[Close]

BLAST of Cp4.1LG00g01430 vs. ExPASy Swiss-Prot
Match: Q8VWH2 (Protein RICE FLOWERING LOCUS T 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFT1 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.8e-60
Identity = 110/168 (65.48%), Postives = 127/168 (75.60%), Query Frame = 0


Query: 6   DPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFFT 65
           DPLVVGR++GDV+D F R  ++  +Y  R +SNGCELKPS V  QPRV +GG D+RTF+T
Sbjct: 8   DPLVVGRIVGDVLDPFVRITNLSVSYGARIVSNGCELKPSMVTQQPRVVVGGNDMRTFYT 67

Query: 66  LVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLVLVLFR 125
           LVMVDPDAPSPS                        QE++CYESPRPT+GIHRLV VLF+
Sbjct: 68  LVMVDPDAPSPSNPNLREYLHWLVTDIPGTTGATFGQEVMCYESPRPTMGIHRLVFVLFQ 127

Query: 126 QLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 150
           QLGRQTVYAPGWRQNF+TR+FAELYNLG PVA VYFNCQRE+GSGGRR
Sbjct: 128 QLGRQTVYAPGWRQNFSTRNFAELYNLGSPVATVYFNCQREAGSGGRR 175

[Close]

BLAST of Cp4.1LG00g01430 vs. ExPASy Swiss-Prot
Match: Q9S7R5 (Protein TWIN SISTER of FT OS=Arabidopsis thaliana OX=3702 GN=TSF PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 5.0e-60
Identity = 110/169 (65.09%), Postives = 128/169 (75.74%), Query Frame = 0


Query: 5   RDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPLVVG V+GDV+D FTR +S++ TY +RE++NG +L+PSQV+N+P VEIGG D R F+
Sbjct: 6   RDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 65

Query: 65  TLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS                         E+VCYESPRP  GIHR+VLVLF
Sbjct: 66  TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 150
           RQLGRQTVYAPGWRQ FNTR+FAE+YNLGLPVAA YFNCQRE+G GGRR
Sbjct: 126 RQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174

[Close]

BLAST of Cp4.1LG00g01430 vs. ExPASy Swiss-Prot
Match: Q9FIT4 (Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana OX=3702 GN=BFT PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.8e-39
Identity = 89/176 (50.57%), Postives = 114/176 (64.77%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYN-NREISNGCELKPSQVVNQPRVEIGGTD 60
           M R+ +PL+VGRVIGDV++ F  S+++R T+N N  +SNG EL PS ++++PRVEIGG D
Sbjct: 1   MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60

Query: 61  LRTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRL 120
           LR+FFTL+M+DPDAPSPS                        +EIV YE+P+P  GIHR 
Sbjct: 61  LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRY 120

Query: 121 VLVLFRQLGRQTV-YAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 151
           V  LF+Q GRQ V  AP  R+ FNT  F+  + L  PVAAVYFN QRE+    RRR
Sbjct: 121 VFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAP--RRR 174

[Close]

BLAST of Cp4.1LG00g01430 vs. NCBI nr
Match: XP_023520641.1 (protein HEADING DATE 3A [Cucurbita pepo subsp. pepo] >KAG6588265.1 Protein HEADING DATE 3A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022184.1 Protein HEADING DATE 3A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305 bits (782), Expect = 3.17e-104
Identity = 155/179 (86.59%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 155
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179

[Close]

BLAST of Cp4.1LG00g01430 vs. NCBI nr
Match: ABR20499.1 (FTL2 [Cucurbita moschata])

HSP 1 Score: 305 bits (781), Expect = 4.50e-104
Identity = 154/179 (86.03%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 155
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179

[Close]

BLAST of Cp4.1LG00g01430 vs. NCBI nr
Match: XP_022973471.1 (protein HEADING DATE 3A [Cucurbita maxima] >ABI94606.1 flowering locus T-like 2 [Cucurbita maxima])

HSP 1 Score: 303 bits (776), Expect = 2.60e-103
Identity = 153/179 (85.47%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDVIDSFT+SISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFTKSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 155
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR+QDDF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRTQDDF 179

[Close]

BLAST of Cp4.1LG00g01430 vs. NCBI nr
Match: XP_022933924.1 (protein HEADING DATE 3A [Cucurbita moschata])

HSP 1 Score: 303 bits (776), Expect = 3.20e-103
Identity = 153/179 (85.47%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 155
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQ+DF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDF 179

[Close]

BLAST of Cp4.1LG00g01430 vs. NCBI nr
Match: XP_022149957.1 (protein HEADING DATE 3A [Momordica charantia])

HSP 1 Score: 291 bits (746), Expect = 9.74e-99
Identity = 145/179 (81.01%), Postives = 152/179 (84.92%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDV+DSF+RSISIR TY++RE++NGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDSFSRSISIRVTYSSREVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHR V
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 155
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR QDD+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDDY 179

[Close]

BLAST of Cp4.1LG00g01430 vs. ExPASy TrEMBL
Match: A6YE10 (FTL2 OS=Cucurbita moschata OX=3662 PE=2 SV=1)

HSP 1 Score: 305 bits (781), Expect = 2.18e-104
Identity = 154/179 (86.03%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 155
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179

[Close]

BLAST of Cp4.1LG00g01430 vs. ExPASy TrEMBL
Match: A6XN27 (Flowering locus T-like 2 OS=Cucurbita maxima OX=3661 GN=FTL2 PE=2 SV=1)

HSP 1 Score: 303 bits (776), Expect = 1.26e-103
Identity = 153/179 (85.47%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDVIDSFT+SISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFTKSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 155
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR+QDDF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRTQDDF 179

[Close]

BLAST of Cp4.1LG00g01430 vs. ExPASy TrEMBL
Match: A0A6J1F141 (protein HEADING DATE 3A OS=Cucurbita moschata OX=3662 GN=LOC111441191 PE=3 SV=1)

HSP 1 Score: 303 bits (776), Expect = 1.55e-103
Identity = 153/179 (85.47%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 155
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQ+DF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDF 179

[Close]

BLAST of Cp4.1LG00g01430 vs. ExPASy TrEMBL
Match: A0A6J1D9F0 (protein HEADING DATE 3A OS=Momordica charantia OX=3673 GN=LOC111018250 PE=3 SV=1)

HSP 1 Score: 291 bits (746), Expect = 4.72e-99
Identity = 145/179 (81.01%), Postives = 152/179 (84.92%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDV+DSF+RSISIR TY++RE++NGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDSFSRSISIRVTYSSREVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHR V
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 155
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR QDD+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDDY 179

[Close]

BLAST of Cp4.1LG00g01430 vs. ExPASy TrEMBL
Match: B9ZYL0 (FT-like protein OS=Cucumis sativus OX=3659 GN=CsFT PE=2 SV=1)

HSP 1 Score: 288 bits (737), Expect = 1.11e-97
Identity = 143/179 (79.89%), Postives = 150/179 (83.80%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDV+D F+RSISIR TY+ +E++NGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDPFSRSISIRVTYSTKEVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHR V
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 155
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR QDD+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDDY 179

[Close]

BLAST of Cp4.1LG00g01430 vs. TAIR 10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 235.0 bits (598), Expect = 4.2e-62
Identity = 110/169 (65.09%), Postives = 129/169 (76.33%), Query Frame = 0


Query: 5   RDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPL+V RV+GDV+D F RSI+++ TY  RE++NG +L+PSQV N+PRVEIGG DLR F+
Sbjct: 6   RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 65

Query: 65  TLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS                         EIVCYE+P PT GIHR+V +LF
Sbjct: 66  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 150
           RQLGRQTVYAPGWRQNFNTR+FAE+YNLGLPVAAV++NCQRESG GGRR
Sbjct: 126 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRR 174

[Close]

BLAST of Cp4.1LG00g01430 vs. TAIR 10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 231.9 bits (590), Expect = 3.5e-61
Identity = 110/169 (65.09%), Postives = 128/169 (75.74%), Query Frame = 0


Query: 5   RDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPLVVG V+GDV+D FTR +S++ TY +RE++NG +L+PSQV+N+P VEIGG D R F+
Sbjct: 6   RDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 65

Query: 65  TLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS                         E+VCYESPRP  GIHR+VLVLF
Sbjct: 66  TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 150
           RQLGRQTVYAPGWRQ FNTR+FAE+YNLGLPVAA YFNCQRE+G GGRR
Sbjct: 126 RQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174

[Close]

BLAST of Cp4.1LG00g01430 vs. TAIR 10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 162.9 bits (411), Expect = 2.0e-40
Identity = 89/176 (50.57%), Postives = 114/176 (64.77%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYN-NREISNGCELKPSQVVNQPRVEIGGTD 60
           M R+ +PL+VGRVIGDV++ F  S+++R T+N N  +SNG EL PS ++++PRVEIGG D
Sbjct: 1   MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60

Query: 61  LRTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRL 120
           LR+FFTL+M+DPDAPSPS                        +EIV YE+P+P  GIHR 
Sbjct: 61  LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRY 120

Query: 121 VLVLFRQLGRQTV-YAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 151
           V  LF+Q GRQ V  AP  R+ FNT  F+  + L  PVAAVYFN QRE+    RRR
Sbjct: 121 VFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAP--RRR 174

[Close]

BLAST of Cp4.1LG00g01430 vs. TAIR 10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.0e-39
Identity = 83/169 (49.11%), Postives = 110/169 (65.09%), Query Frame = 0


Query: 6   DPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFFT 65
           +PL++GRV+GDV+D FT +  +  +YN +++SNG EL PS V ++PRVEI G DLR+FFT
Sbjct: 10  EPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFT 69

Query: 66  LVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLVLVLFR 125
           LVM+DPD P PS                        +E+V YE PRP++GIHR V VLFR
Sbjct: 70  LVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFR 129

Query: 126 QLGRQTVY--APGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGR 149
           Q  R+ ++   P  R +FNTR FA  Y+LGLPVAAV+FN QRE+ +  R
Sbjct: 130 QKQRRVIFPNIPS-RDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

[Close]

BLAST of Cp4.1LG00g01430 vs. TAIR 10
Match: AT2G27550.1 (centroradialis )

HSP 1 Score: 155.6 bits (392), Expect = 3.2e-38
Identity = 82/171 (47.95%), Postives = 111/171 (64.91%), Query Frame = 0


Query: 6   DPLVVGRVIGDVIDSFTRSISIRATYN-NREISNGCELKPSQVVNQPRVEIGGTDLRTFF 65
           DPL+VGRVIGDV+D+  +++ +  TYN ++++ NG EL PS V  +P+VE+ G D+R+FF
Sbjct: 7   DPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFF 66

Query: 66  TLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLVLVLF 125
           TLVM DPD P PS                        +EI+ YE PRP +GIHR V +LF
Sbjct: 67  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVYLLF 126

Query: 126 RQLGRQTVYA-PGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 151
           +Q  R +V + P +R  FNTR+FA   +LGLPVAAV+FNCQRE+ +  RRR
Sbjct: 127 KQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAA--RRR 175

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g01430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WI9	2.7e-66	69.01	Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV...	[more]
Q9SXZ2	5.9e-61	65.09	Protein FLOWERING LOCUS T OS=Arabidopsis thaliana OX=3702 GN=FT PE=1 SV=2	[more]
Q8VWH2	3.8e-60	65.48	Protein RICE FLOWERING LOCUS T 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFT...	[more]
Q9S7R5	5.0e-60	65.09	Protein TWIN SISTER of FT OS=Arabidopsis thaliana OX=3702 GN=TSF PE=2 SV=1	[more]
Q9FIT4	2.8e-39	50.57	Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana OX=3702 GN=BFT PE=3 SV=1	[more]

BLAST of Cp4.1LG00g01430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520641.1	3.17e-104	86.59	protein HEADING DATE 3A [Cucurbita pepo subsp. pepo] >KAG6588265.1 Protein HEADI...	[more]
ABR20499.1	4.50e-104	86.03	FTL2 [Cucurbita moschata]	[more]
XP_022973471.1	2.60e-103	85.47	protein HEADING DATE 3A [Cucurbita maxima] >ABI94606.1 flowering locus T-like 2 ...	[more]
XP_022933924.1	3.20e-103	85.47	protein HEADING DATE 3A [Cucurbita moschata]	[more]
XP_022149957.1	9.74e-99	81.01	protein HEADING DATE 3A [Momordica charantia]	[more]

BLAST of Cp4.1LG00g01430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A6YE10	2.18e-104	86.03	FTL2 OS=Cucurbita moschata OX=3662 PE=2 SV=1	[more]
A6XN27	1.26e-103	85.47	Flowering locus T-like 2 OS=Cucurbita maxima OX=3661 GN=FTL2 PE=2 SV=1	[more]
A0A6J1F141	1.55e-103	85.47	protein HEADING DATE 3A OS=Cucurbita moschata OX=3662 GN=LOC111441191 PE=3 SV=1	[more]
A0A6J1D9F0	4.72e-99	81.01	protein HEADING DATE 3A OS=Momordica charantia OX=3673 GN=LOC111018250 PE=3 SV=1	[more]
B9ZYL0	1.11e-97	79.89	FT-like protein OS=Cucumis sativus OX=3659 GN=CsFT PE=2 SV=1	[more]

BLAST of Cp4.1LG00g01430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65480.1	4.2e-62	65.09	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT4G20370.1	3.5e-61	65.09	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G62040.1	2.0e-40	50.57	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G03840.1	1.0e-39	49.11	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT2G27550.1	3.2e-38	47.95	centroradialis	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036610	PEBP-like superfamily	GENE3D	3.90.280.10		coord: 79..143 e-value: 3.0E-18 score: 68.0
IPR036610	PEBP-like superfamily	GENE3D	3.90.280.10		coord: 3..78 e-value: 1.3E-21 score: 79.0
IPR036610	PEBP-like superfamily	SUPERFAMILY	49777	PEBP-like	coord: 6..146
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	PANTHER	PTHR11362	PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN	coord: 78..149 coord: 4..78
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	CDD	cd00866	PEBP_euk	coord: 27..139 e-value: 2.12758E-28 score: 100.526
None	No IPR available	PANTHER	PTHR11362:SF9	PROTEIN FLOWERING LOCUS T-RELATED	coord: 78..149 coord: 4..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g01430.1	Cp4.1LG00g01430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm