CmoCh20G010110 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G010110
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	F-box protein
Location	Cmo_Chr20: 6505767 .. 6508353 (+)
RNA-Seq Expression	CmoCh20G010110
Synteny	CmoCh20G010110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCATACAGCGAAGTTCATGCGGGAGAGGATGAGATGAGAACGCCCTGGTGGCGGCCTCCTAGATTCCATGGAAACTGATAAAAGTTACCTAAATATTTTGGATATTTTTGGAGGTCAGAATCTAGAAATCATGGCGGTATGATGTCAACATCCTTTCTGTCTCTTTCTCTTTCTCCTTCTGTGGAATCTTCCACCTGCTTTTTTATGGTTCTCTTCTGCCATGGCATACGACACCGCAGACTTCTTCTTCCAAATTGATATGCGCAGAGGAGAGGGGAGGAGAAGAATGGATTCGGCTGCTGTTTGGGCGGTAGGGATGGACTTCGAGCCGGAGATTGATCGTTTGCCGATTGACCTACTCGCTCATATTTTTGCGATGATCACGTCCTTCACCGATTTGGCTCAGTAATTGATGTTAATTTCGGTTTTCTTTATGAATTTCTTTTGTTCAATTGCTTTTGTTCTTGTTCCTAATTTTGGGGGTTTCTGCGGAAAATTTTCCGGAAAAACGCAGGGCGTGCGGCGTTTGTCGGAAATGGAAGGAAGGAGTTAAACTGTCTCTTGGTAGGAAGGAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATGACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGAGACCTCGACATGTAATCCCTCTCTCTCTAGAATGATGAAACGAGTTTTTCAAAATCGCAGGATAATCAATTCAATCGGCTTTCTGTTTCCATTGTGTGTTTATCATTAATCAGGCAATTTGATTATGAACCACATAAACAGAGGTTTCTCTTATGATTGGAGTCTCCGAAAATGAAATGCTGGAGAAAGTTCTCTAAAATTGTTTTTATAAAGCTTTGTTAGATTCTTGATGGTTATGGTTATGGCTATGGCTGCCTTCATTGTTCTAGTGTCTAGTCGAGCAATGTTCTAGCCCATGATTCTGTTGTAATTTGTGCCTTTTCAGCTCAAGAAGCCGTTGGGGTAGCCAAATAACAGACCATGGATTGCACCAAATCTCTCTTGCAAACTGCATTCCCAACCTCACGTCCATTTCGCTATGGGGCATGGCAGGGATCACCGACAAGGGGGTTGTGCAGCTGGTATCATATTATCTTATCTTTACTCCAAACATGTCTGCATAAATAGCCCTTCAAATTGGCCTCAATGTGTGAATCAGAGTATGAGTTTAGGTGGAAATTGAGTAGGATATTTGTTGTTTCTATCTTCATTGATCTTTGCACCATTATGTTTTCAGTATTTTCTTACTTATTTTGGATCTTCTAGTGTCTATCTTCGAAAAGTAAACAACAACTTGAGAAATCATCCTGTCCTGAAGTTATTTCATGTTCTTCAGAGGAATTTAGGAGGCAGTTTTAGACAACATTTTGTATTCTCTGCTTCCAGAACCTTTTTGAAGTTCGAGGTTATTCTTAGGAATCACGGACCTCACAATGGTATGATATTGTCCACTTTGAGTATAAGTTCTCATGGCTTTGCTTTGGACTTCCCAAAAAGCTTCATGCCAATGGAGATCTATTCCTGACTTATAAATTCAGGATCATTCCCAAAATTAGTCAACGTGGGACTCCCTCCCAATAATCCTCAACAGTTATTACCGTGCTGATTGCTTGTGTCTATAGGCTACCTCTCTTATCCGCTTCTCTACAAGGTTGACTTTCTTCTTCCTTCAGATTGGACCAAGTCTTTAGGTTGTTTAAGTAGGTGGACTAGGTTAGGTTGATGTTTTGGAGTGATCTTCGATCAGGGTCGTCACATCCACTTTCCACGTTCTGATGTTGTACATGATTCATTAAAATTTTGCATTTGGTTGTGTTCCCAGATTTCCAGAGCCAACTCCTTGCAAAACCTGAATGTCGGTGGCACCTTTGTCACAGATGTCTCTCTACTTGCAATTGCGGATAACTGTCCAAATTTGAAGGTGAACATTCTAAGAAACTCCTCTTCCATTGCAGTGCCTTTCTCGAGGTCTATGAACCATATAACACCATTCATGACTTGCACAATCTTTAATCACTGCATTTCTTCCTTCCTTTCTGCAGAGCATTGTCCTGTGGAGCTGTCGCCATGTAACGGAGAGTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAAATGTCTGGGGAATGAGGGTACCTGTAGACTGCTTCATTGGTTTGGTGGCCATAAGTCCATCACTTCAAATAAAATCAAGAAGTCTGCTTCTAAATTCTATGTGGCCAGTCGTATGAAATATATGCTCTAATATTGTATCCTGTAAAGCTTCCATTTTAAGCATGTCTTCATCCTTGTGTTTTTCCTTATTCTTCCACCACCAATAAGCTGCCTATGGTTCTTCCAGTTCATCTAAAACTGAACTATTTTCTCCTCAAGTAAATATAATAAGGGTATGTAAAAACTATGCTGTCTTATTTTGGGGCTAAATGTATTTGTATCCCTATGGTCCCATAAATACATTTCTTTGGTTCCTCAACCTTAAGATTTGGCCAGTAATTTCTTTAGATCCAACTAATTCTTTTACTTGTTCAAGGTGTTCATATCAGC

mRNA sequence

ATCCATACAGCGAAGTTCATGCGGGAGAGGATGAGATGAGAACGCCCTGGTGGCGGCCTCCTAGATTCCATGGAAACTGATAAAAGTTACCTAAATATTTTGGATATTTTTGGAGGTCAGAATCTAGAAATCATGGCGGTATGATGTCAACATCCTTTCTGTCTCTTTCTCTTTCTCCTTCTGTGGAATCTTCCACCTGCTTTTTTATGGTTCTCTTCTGCCATGGCATACGACACCGCAGACTTCTTCTTCCAAATTGATATGCGCAGAGGAGAGGGGAGGAGAAGAATGGATTCGGCTGCTGTTTGGGCGGTAGGGATGGACTTCGAGCCGGAGATTGATCGTTTGCCGATTGACCTACTCGCTCATATTTTTGCGATGATCACGTCCTTCACCGATTTGGCTCAGGCGTGCGGCGTTTGTCGGAAATGGAAGGAAGGAGTTAAACTGTCTCTTGGTAGGAAGGAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATGACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGAGACCTCGACATCTCAAGAAGCCGTTGGGGTAGCCAAATAACAGACCATGGATTGCACCAAATCTCTCTTGCAAACTGCATTCCCAACCTCACGTCCATTTCGCTATGGGGCATGGCAGGGATCACCGACAAGGGGGTTGTGCAGCTGATTTCCAGAGCCAACTCCTTGCAAAACCTGAATGTCGGTGGCACCTTTGTCACAGATGTCTCTCTACTTGCAATTGCGGATAACTGTCCAAATTTGAAGAGCATTGTCCTGTGGAGCTGTCGCCATGTAACGGAGAGTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAAATGTCTGGGGAATGAGGGTACCTGTAGACTGCTTCATTGGTTTGGTGGCCATAAGTCCATCACTTCAAATAAAATCAAGAAGTCTGCTTCTAAATTCTATGTGGCCAGTCGTATGAAATATATGCTCTAATATTGTATCCTGTAAAGCTTCCATTTTAAGCATGTCTTCATCCTTGTGTTTTTCCTTATTCTTCCACCACCAATAAGCTGCCTATGGTTCTTCCAGTTCATCTAAAACTGAACTATTTTCTCCTCAAGTAAATATAATAAGGGTATGTAAAAACTATGCTGTCTTATTTTGGGGCTAAATGTATTTGTATCCCTATGGTCCCATAAATACATTTCTTTGGTTCCTCAACCTTAAGATTTGGCCAGTAATTTCTTTAGATCCAACTAATTCTTTTACTTGTTCAAGGTGTTCATATCAGC

Coding sequence (CDS)

ATGGCATACGACACCGCAGACTTCTTCTTCCAAATTGATATGCGCAGAGGAGAGGGGAGGAGAAGAATGGATTCGGCTGCTGTTTGGGCGGTAGGGATGGACTTCGAGCCGGAGATTGATCGTTTGCCGATTGACCTACTCGCTCATATTTTTGCGATGATCACGTCCTTCACCGATTTGGCTCAGGCGTGCGGCGTTTGTCGGAAATGGAAGGAAGGAGTTAAACTGTCTCTTGGTAGGAAGGAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATGACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGAGACCTCGACATCTCAAGAAGCCGTTGGGGTAGCCAAATAACAGACCATGGATTGCACCAAATCTCTCTTGCAAACTGCATTCCCAACCTCACGTCCATTTCGCTATGGGGCATGGCAGGGATCACCGACAAGGGGGTTGTGCAGCTGATTTCCAGAGCCAACTCCTTGCAAAACCTGAATGTCGGTGGCACCTTTGTCACAGATGTCTCTCTACTTGCAATTGCGGATAACTGTCCAAATTTGAAGAGCATTGTCCTGTGGAGCTGTCGCCATGTAACGGAGAGTGGACTTCTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCGATAAATGTCTGGGGAATGAGGGTACCTGTAGACTGCTTCATTGGTTTGGTGGCCATAAGTCCATCACTTCAAATAAAATCAAGAAGTCTGCTTCTAAATTCTATGTGGCCAGTCGTATGA

Protein sequence

MAYDTADFFFQIDMRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV

Homology

[Close]

BLAST of CmoCh20G010110 vs. ExPASy Swiss-Prot
Match: Q9FH99 (F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.9e-85
Identity = 149/221 (67.42%), Postives = 183/221 (82.81%), Query Frame = 0


Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           MD E  IDRLP+DLLA+IF++ TSFT LAQA GVC+KW++ V  S+ R+E+LSFAGWKMD
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQASGVCKKWRKAVNQSMARRETLSFAGWKMD 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDST+RL+  A++L++LDISRSRWG  ITD+GL+QI+ A C+ NL S+SLWGM  ITD G
Sbjct: 61  DDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           VVQLISR +SLQ+LN+GGTF+TD SL AIA+ C  LK+I +W CRHVTE GLL+LV+KCR
Sbjct: 121 VVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHVTERGLLVLVNKCR 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 254
           KLESIN+WG RVPVDCFI L+ ISP+LQIK   LLLN+  P
Sbjct: 181 KLESINLWGTRVPVDCFIALLTISPALQIKPMELLLNAQNP 221

[Close]

BLAST of CmoCh20G010110 vs. ExPASy Swiss-Prot
Match: O49286 (F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.7e-15
Identity = 59/206 (28.64%), Postives = 101/206 (49.03%), Query Frame = 0


Query: 42  LPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKM---------- 101
           +P++LL  I  ++   T +  +C +C  W++ V L L R  SLS+    M          
Sbjct: 31  IPVELLMKILNLVDDRTVIIASC-ICSGWRDAVSLGLTRL-SLSWCKKNMNSLVLSLAPK 90

Query: 102 ----------------DDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIP 161
                           +D++   +  H + L+DLD+S+S   S+ITDH L+  SLA    
Sbjct: 91  FVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKITDHSLY--SLARGCT 150

Query: 162 NLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTF--VTDVSLLAIADNCPNLKSIVL 220
           NLT ++L G    +D  +  L      L+ LN+ G    V+D +L AI +NC  L+S+ L
Sbjct: 151 NLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNL 210

[Close]

BLAST of CmoCh20G010110 vs. ExPASy Swiss-Prot
Match: Q9LPL4 (F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.4e-13
Identity = 53/207 (25.60%), Postives = 103/207 (49.76%), Query Frame = 0


Query: 42  LPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGR--------------------- 101
           +P++LL  I +++    ++  A GVC  W++ +   L R                     
Sbjct: 31  IPVELLMRILSLVDD-RNVIVASGVCTGWRDAISFGLTRLRLSWCNNNMNSLVLSLVPKF 90

Query: 102 --KESLSFAGWK--MDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPN 161
              ++L+    K  ++D++   +  H + L++LD+S+S    +ITD  L+  +LA+  P+
Sbjct: 91  VKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKS---LKITDRSLY--ALAHGCPD 150

Query: 162 LTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTF--VTDVSLLAIADNCPNLKSIVLW 221
           LT ++L G    +D  +  L      L+ LN+ G    VTD +L AI +NC  ++S+ L 
Sbjct: 151 LTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLG 210

[Close]

BLAST of CmoCh20G010110 vs. ExPASy Swiss-Prot
Match: Q9SKK0 (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.9e-12
Identity = 58/203 (28.57%), Postives = 96/203 (47.29%), Query Frame = 0


Query: 39  IDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKE---------------- 98
           ID LP + L  IF  ++   + +    V ++W   V  S+ +KE                
Sbjct: 64  IDVLPDECLFEIFRRLSGPQERSACAFVSKQWLTLVS-SIRQKEIDVPSKITEDGDDCEG 123

Query: 99  --SLSFAGWKMDDDSTARL---IRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNL 158
             S S  G K  D   A +         L  L I  S   ++++D GL   S+    P+L
Sbjct: 124 CLSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGSN-SAKVSDLGLR--SIGRSCPSL 183

Query: 159 TSISLWGMAGITDKGVVQLISRANSLQNLNVGG-TFVTDVSLLAIADNCPNLKSIVLWSC 218
            S+SLW ++ ITD G++++      L+ L +   + +TD  L+AIA +CPNL  + L +C
Sbjct: 184 GSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEAC 243

Query: 219 RHVTESGLLILVSKCRKLESINV 220
             + + GLL +   C KL+S+++
Sbjct: 244 SRIGDEGLLAIARSCSKLKSVSI 262

[Close]

BLAST of CmoCh20G010110 vs. ExPASy Swiss-Prot
Match: A6H779 (F-box/LRR-repeat protein 2 OS=Bos taurus OX=9913 GN=FBXL2 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.5e-10
Identity = 50/164 (30.49%), Postives = 77/164 (46.95%), Query Frame = 0


Query: 59  DLAQACGVCRKWKEGVKLSLGRKESLSFAGW--KMDDDSTARLIRHAYSLRDLDISRSRW 118
           DL     +     +G+       E L+ + W  ++  D    L+R    LR L +   R 
Sbjct: 136 DLTSCVSITNSSLKGISEGCRHLEYLNLS-WCDQITKDGVEALVRGCRGLRALLL---RG 195

Query: 119 GSQITDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGT-FVTD 178
            +Q+ D  L  I   N    L S++L   + +TD GVVQL      LQ L + G   +TD
Sbjct: 196 CTQLEDEALKHIQ--NYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTD 255

Query: 179 VSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINV 220
            SL A+A NCP L+ +    C H+T++G  +L   C  LE +++
Sbjct: 256 ASLTALALNCPRLQILEAARCSHLTDAGFTLLARNCHDLEKMDL 293

[Close]

BLAST of CmoCh20G010110 vs. ExPASy TrEMBL
Match: A0A6J1EIZ0 (F-box protein At5g67140-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434817 PE=4 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.2e-143
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MAYDTADFFFQIDMRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDL 60
           MAYDTADFFFQIDMRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDL
Sbjct: 1   MAYDTADFFFQIDMRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDL 60

Query: 61  AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQI 120
           AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQI
Sbjct: 61  AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQI 120

Query: 121 TDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLA 180
           TDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLA
Sbjct: 121 TDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLA 180

Query: 181 IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQ 240
           IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQ
Sbjct: 181 IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQ 240

Query: 241 IKSRSLLLNSMWPVV 256
           IKSRSLLLNSMWPVV
Sbjct: 241 IKSRSLLLNSMWPVV 255

[Close]

BLAST of CmoCh20G010110 vs. ExPASy TrEMBL
Match: A0A6J1J9G2 (F-box protein At5g67140-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483796 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 5.4e-139
Identity = 248/255 (97.25%), Postives = 249/255 (97.65%), Query Frame = 0


Query: 1   MAYDTADFFFQIDMRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDL 60
           MAYD  DFFFQIDMRRGEGRRRMDSA VWAVGM+FEPEIDRLPIDLLAHIFAMITSFTDL
Sbjct: 1   MAYDPTDFFFQIDMRRGEGRRRMDSADVWAVGMEFEPEIDRLPIDLLAHIFAMITSFTDL 60

Query: 61  AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQI 120
           AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLI HAYSLRDLDISRSRWGSQI
Sbjct: 61  AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLICHAYSLRDLDISRSRWGSQI 120

Query: 121 TDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLA 180
           TD GLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLA
Sbjct: 121 TDRGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLA 180

Query: 181 IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQ 240
           IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESIN WGMRVPVDCFIGLVAISPSLQ
Sbjct: 181 IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINAWGMRVPVDCFIGLVAISPSLQ 240

Query: 241 IKSRSLLLNSMWPVV 256
           IKSRSLLLNSMWPVV
Sbjct: 241 IKSRSLLLNSMWPVV 255

[Close]

BLAST of CmoCh20G010110 vs. ExPASy TrEMBL
Match: A0A6J1EIM3 (F-box protein At5g67140-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434817 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.1e-135
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 14  MRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEG 73
           MRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEG
Sbjct: 1   MRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEG 60

Query: 74  VKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANC 133
           VKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANC
Sbjct: 61  VKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANC 120

Query: 134 IPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVL 193
           IPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVL
Sbjct: 121 IPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVL 180

Query: 194 WSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 253
           WSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP
Sbjct: 181 WSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 240

Query: 254 VV 256
           VV
Sbjct: 241 VV 242

[Close]

BLAST of CmoCh20G010110 vs. ExPASy TrEMBL
Match: A0A6J1J645 (F-box protein At5g67140-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483796 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 6.4e-132
Identity = 237/242 (97.93%), Postives = 238/242 (98.35%), Query Frame = 0


Query: 14  MRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEG 73
           MRRGEGRRRMDSA VWAVGM+FEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEG
Sbjct: 1   MRRGEGRRRMDSADVWAVGMEFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEG 60

Query: 74  VKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANC 133
           VKLSLGRKESLSFAGWKMDDDSTARLI HAYSLRDLDISRSRWGSQITD GLHQISLANC
Sbjct: 61  VKLSLGRKESLSFAGWKMDDDSTARLICHAYSLRDLDISRSRWGSQITDRGLHQISLANC 120

Query: 134 IPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVL 193
           IPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVL
Sbjct: 121 IPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVL 180

Query: 194 WSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 253
           WSCRHVTESGLLILVSKCRKLESIN WGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP
Sbjct: 181 WSCRHVTESGLLILVSKCRKLESINAWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 240

Query: 254 VV 256
           VV
Sbjct: 241 VV 242

[Close]

BLAST of CmoCh20G010110 vs. ExPASy TrEMBL
Match: A0A1S4E1P2 (F-box protein At5g67140 OS=Cucumis melo OX=3656 GN=LOC103497375 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 9.0e-118
Identity = 212/233 (90.99%), Postives = 224/233 (96.14%), Query Frame = 0


Query: 23  MDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKE 82
           MDS  VW+V M+ EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGR++
Sbjct: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRK 60

Query: 83  SLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISL 142
           SLSFAGWKMDD+STARLIRHAYSLR+LDISRSRWG QITDHGL++ISLA CIPNL SISL
Sbjct: 61  SLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLKSISL 120

Query: 143 WGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTES 202
           WGMAGITDKGVVQLISRANSLQNLN+GGTFVTDVSL AIAD+CPNLK+IVLWSCRHVTE+
Sbjct: 121 WGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTET 180

Query: 203 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 256
           GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS LLNSMWPVV
Sbjct: 181 GLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRS-LLNSMWPVV 232

[Close]

BLAST of CmoCh20G010110 vs. NCBI nr
Match: XP_022927966.1 (F-box protein At5g67140-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 518.8 bits (1335), Expect = 2.6e-143
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MAYDTADFFFQIDMRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDL 60
           MAYDTADFFFQIDMRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDL
Sbjct: 1   MAYDTADFFFQIDMRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDL 60

Query: 61  AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQI 120
           AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQI
Sbjct: 61  AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQI 120

Query: 121 TDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLA 180
           TDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLA
Sbjct: 121 TDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLA 180

Query: 181 IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQ 240
           IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQ
Sbjct: 181 IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQ 240

Query: 241 IKSRSLLLNSMWPVV 256
           IKSRSLLLNSMWPVV
Sbjct: 241 IKSRSLLLNSMWPVV 255

[Close]

BLAST of CmoCh20G010110 vs. NCBI nr
Match: KAG7015628.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 511.9 bits (1317), Expect = 3.1e-141
Identity = 252/255 (98.82%), Postives = 253/255 (99.22%), Query Frame = 0


Query: 1   MAYDTADFFFQIDMRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDL 60
           MAYDTADFFFQIDMRRGEGRRRMDSAAVWAVGM+ EPEIDRLPIDLLAHIFAMITSFTDL
Sbjct: 1   MAYDTADFFFQIDMRRGEGRRRMDSAAVWAVGMESEPEIDRLPIDLLAHIFAMITSFTDL 60

Query: 61  AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQI 120
           AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQI
Sbjct: 61  AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQI 120

Query: 121 TDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLA 180
           TDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSL A
Sbjct: 121 TDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLRA 180

Query: 181 IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQ 240
           IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQ
Sbjct: 181 IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQ 240

Query: 241 IKSRSLLLNSMWPVV 256
           IKSRSLLLNSMWPVV
Sbjct: 241 IKSRSLLLNSMWPVV 255

[Close]

BLAST of CmoCh20G010110 vs. NCBI nr
Match: XP_023512668.1 (F-box protein At5g67140-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512669.1 F-box protein At5g67140-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 506.1 bits (1302), Expect = 1.7e-139
Identity = 248/255 (97.25%), Postives = 251/255 (98.43%), Query Frame = 0


Query: 1   MAYDTADFFFQIDMRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDL 60
           M YDTADFFFQI MRRGEGRRRMDSAAVWAVGMDF+PEIDRLPIDLLAHIFAMITSFTDL
Sbjct: 1   MPYDTADFFFQIHMRRGEGRRRMDSAAVWAVGMDFDPEIDRLPIDLLAHIFAMITSFTDL 60

Query: 61  AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQI 120
           AQAC VCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWG QI
Sbjct: 61  AQACAVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGCQI 120

Query: 121 TDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLA 180
           TDHGLHQISLA+CIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVS+LA
Sbjct: 121 TDHGLHQISLASCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSILA 180

Query: 181 IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQ 240
           IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQ
Sbjct: 181 IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQ 240

Query: 241 IKSRSLLLNSMWPVV 256
           IKSRSLLLNSMWPVV
Sbjct: 241 IKSRSLLLNSMWPVV 255

[Close]

BLAST of CmoCh20G010110 vs. NCBI nr
Match: XP_022985881.1 (F-box protein At5g67140-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 503.4 bits (1295), Expect = 1.1e-138
Identity = 248/255 (97.25%), Postives = 249/255 (97.65%), Query Frame = 0


Query: 1   MAYDTADFFFQIDMRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDL 60
           MAYD  DFFFQIDMRRGEGRRRMDSA VWAVGM+FEPEIDRLPIDLLAHIFAMITSFTDL
Sbjct: 1   MAYDPTDFFFQIDMRRGEGRRRMDSADVWAVGMEFEPEIDRLPIDLLAHIFAMITSFTDL 60

Query: 61  AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQI 120
           AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLI HAYSLRDLDISRSRWGSQI
Sbjct: 61  AQACGVCRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLICHAYSLRDLDISRSRWGSQI 120

Query: 121 TDHGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLA 180
           TD GLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLA
Sbjct: 121 TDRGLHQISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLA 180

Query: 181 IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQ 240
           IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESIN WGMRVPVDCFIGLVAISPSLQ
Sbjct: 181 IADNCPNLKSIVLWSCRHVTESGLLILVSKCRKLESINAWGMRVPVDCFIGLVAISPSLQ 240

Query: 241 IKSRSLLLNSMWPVV 256
           IKSRSLLLNSMWPVV
Sbjct: 241 IKSRSLLLNSMWPVV 255

[Close]

BLAST of CmoCh20G010110 vs. NCBI nr
Match: KAG6571264.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 498.8 bits (1283), Expect = 2.7e-137
Identity = 245/249 (98.39%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 7   DFFFQIDMRRGEGRRRMDSAAVWAVGMDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGV 66
           DFFFQID+RRGEGRRRMDSAAVWAVGM+ EPEIDRLPIDLLAHIFAMITSFTDLAQACGV
Sbjct: 16  DFFFQIDVRRGEGRRRMDSAAVWAVGMESEPEIDRLPIDLLAHIFAMITSFTDLAQACGV 75

Query: 67  CRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLH 126
           CRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWG+QITDHGLH
Sbjct: 76  CRKWKEGVKLSLGRKESLSFAGWKMDDDSTARLIRHAYSLRDLDISRSRWGNQITDHGLH 135

Query: 127 QISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCP 186
           QISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCP
Sbjct: 136 QISLANCIPNLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTFVTDVSLLAIADNCP 195

Query: 187 NLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSL 246
           NLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSL
Sbjct: 196 NLKSIVLWSCRHVTESGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSL 255

Query: 247 LLNSMWPVV 256
           LLNSMWPVV
Sbjct: 256 LLNSMWPVV 264

[Close]

BLAST of CmoCh20G010110 vs. TAIR 10
Match: AT5G67140.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 317.0 bits (811), Expect = 1.4e-86
Identity = 149/221 (67.42%), Postives = 183/221 (82.81%), Query Frame = 0


Query: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92
           MD E  IDRLP+DLLA+IF++ TSFT LAQA GVC+KW++ V  S+ R+E+LSFAGWKMD
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQASGVCKKWRKAVNQSMARRETLSFAGWKMD 60

Query: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152
           DDST+RL+  A++L++LDISRSRWG  ITD+GL+QI+ A C+ NL S+SLWGM  ITD G
Sbjct: 61  DDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSG 120

Query: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212
           VVQLISR +SLQ+LN+GGTF+TD SL AIA+ C  LK+I +W CRHVTE GLL+LV+KCR
Sbjct: 121 VVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHVTERGLLVLVNKCR 180

Query: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 254
           KLESIN+WG RVPVDCFI L+ ISP+LQIK   LLLN+  P
Sbjct: 181 KLESINLWGTRVPVDCFIALLTISPALQIKPMELLLNAQNP 221

[Close]

BLAST of CmoCh20G010110 vs. TAIR 10
Match: AT1G77000.1 (RNI-like superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 3.3e-16
Identity = 59/206 (28.64%), Postives = 101/206 (49.03%), Query Frame = 0


Query: 42  LPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKM---------- 101
           +P++LL  I  ++   T +  +C +C  W++ V L L R  SLS+    M          
Sbjct: 31  IPVELLMKILNLVDDRTVIIASC-ICSGWRDAVSLGLTRL-SLSWCKKNMNSLVLSLAPK 90

Query: 102 ----------------DDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIP 161
                           +D++   +  H + L+DLD+S+S   S+ITDH L+  SLA    
Sbjct: 91  FVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKITDHSLY--SLARGCT 150

Query: 162 NLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTF--VTDVSLLAIADNCPNLKSIVL 220
           NLT ++L G    +D  +  L      L+ LN+ G    V+D +L AI +NC  L+S+ L
Sbjct: 151 NLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNL 210

[Close]

BLAST of CmoCh20G010110 vs. TAIR 10
Match: AT1G77000.2 (RNI-like superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 3.3e-16
Identity = 59/206 (28.64%), Postives = 101/206 (49.03%), Query Frame = 0


Query: 42  LPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKM---------- 101
           +P++LL  I  ++   T +  +C +C  W++ V L L R  SLS+    M          
Sbjct: 31  IPVELLMKILNLVDDRTVIIASC-ICSGWRDAVSLGLTRL-SLSWCKKNMNSLVLSLAPK 90

Query: 102 ----------------DDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIP 161
                           +D++   +  H + L+DLD+S+S   S+ITDH L+  SLA    
Sbjct: 91  FVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKITDHSLY--SLARGCT 150

Query: 162 NLTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTF--VTDVSLLAIADNCPNLKSIVL 220
           NLT ++L G    +D  +  L      L+ LN+ G    V+D +L AI +NC  L+S+ L
Sbjct: 151 NLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNL 210

[Close]

BLAST of CmoCh20G010110 vs. TAIR 10
Match: AT1G21410.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-14
Identity = 53/207 (25.60%), Postives = 103/207 (49.76%), Query Frame = 0


Query: 42  LPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGR--------------------- 101
           +P++LL  I +++    ++  A GVC  W++ +   L R                     
Sbjct: 31  IPVELLMRILSLVDD-RNVIVASGVCTGWRDAISFGLTRLRLSWCNNNMNSLVLSLVPKF 90

Query: 102 --KESLSFAGWK--MDDDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPN 161
              ++L+    K  ++D++   +  H + L++LD+S+S    +ITD  L+  +LA+  P+
Sbjct: 91  VKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKS---LKITDRSLY--ALAHGCPD 150

Query: 162 LTSISLWGMAGITDKGVVQLISRANSLQNLNVGGTF--VTDVSLLAIADNCPNLKSIVLW 221
           LT ++L G    +D  +  L      L+ LN+ G    VTD +L AI +NC  ++S+ L 
Sbjct: 151 LTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLG 210

[Close]

BLAST of CmoCh20G010110 vs. TAIR 10
Match: AT2G25490.1 (EIN3-binding F box protein 1 )

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-13
Identity = 58/203 (28.57%), Postives = 96/203 (47.29%), Query Frame = 0


Query: 39  IDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKE---------------- 98
           ID LP + L  IF  ++   + +    V ++W   V  S+ +KE                
Sbjct: 64  IDVLPDECLFEIFRRLSGPQERSACAFVSKQWLTLVS-SIRQKEIDVPSKITEDGDDCEG 123

Query: 99  --SLSFAGWKMDDDSTARL---IRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNL 158
             S S  G K  D   A +         L  L I  S   ++++D GL   S+    P+L
Sbjct: 124 CLSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGSN-SAKVSDLGLR--SIGRSCPSL 183

Query: 159 TSISLWGMAGITDKGVVQLISRANSLQNLNVGG-TFVTDVSLLAIADNCPNLKSIVLWSC 218
            S+SLW ++ ITD G++++      L+ L +   + +TD  L+AIA +CPNL  + L +C
Sbjct: 184 GSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEAC 243

Query: 219 RHVTESGLLILVSKCRKLESINV 220
             + + GLL +   C KL+S+++
Sbjct: 244 SRIGDEGLLAIARSCSKLKSVSI 262

The following BLAST results are available for this feature:

BLAST of CmoCh20G010110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH99	1.9e-85	67.42	F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1	[more]
O49286	4.7e-15	28.64	F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1	[more]
Q9LPL4	3.4e-13	25.60	F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1	[more]
Q9SKK0	2.9e-12	28.57	EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1	[more]
A6H779	3.5e-10	30.49	F-box/LRR-repeat protein 2 OS=Bos taurus OX=9913 GN=FBXL2 PE=2 SV=1	[more]

BLAST of CmoCh20G010110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIZ0	1.2e-143	100.00	F-box protein At5g67140-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1J9G2	5.4e-139	97.25	F-box protein At5g67140-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483...	[more]
A0A6J1EIM3	2.1e-135	100.00	F-box protein At5g67140-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1J645	6.4e-132	97.93	F-box protein At5g67140-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483...	[more]
A0A1S4E1P2	9.0e-118	90.99	F-box protein At5g67140 OS=Cucumis melo OX=3656 GN=LOC103497375 PE=4 SV=1	[more]

BLAST of CmoCh20G010110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927966.1	2.6e-143	100.00	F-box protein At5g67140-like isoform X1 [Cucurbita moschata]	[more]
KAG7015628.1	3.1e-141	98.82	F-box protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023512668.1	1.7e-139	97.25	F-box protein At5g67140-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_0235126...	[more]
XP_022985881.1	1.1e-138	97.25	F-box protein At5g67140-like isoform X1 [Cucurbita maxima]	[more]
KAG6571264.1	2.7e-137	98.39	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh20G010110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67140.1	1.4e-86	67.42	F-box/RNI-like superfamily protein	[more]
AT1G77000.1	3.3e-16	28.64	RNI-like superfamily protein	[more]
AT1G77000.2	3.3e-16	28.64	RNI-like superfamily protein	[more]
AT1G21410.1	2.4e-14	25.60	F-box/RNI-like superfamily protein	[more]
AT2G25490.1	2.0e-13	28.57	EIN3-binding F box protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 134..159 e-value: 4.0 score: 16.4 coord: 185..210 e-value: 6.4E-4 score: 29.0 coord: 160..184 e-value: 19.0 score: 12.4 coord: 103..133 e-value: 660.0 score: 0.3
None	No IPR available	GENE3D	1.20.1280.50		coord: 40..74 e-value: 1.2E-5 score: 27.0
None	No IPR available	PANTHER	PTHR16134	F-BOX/TPR REPEAT PROTEIN POF3	coord: 26..250
None	No IPR available	PANTHER	PTHR16134:SF117	SUBFAMILY NOT NAMED	coord: 26..250
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 93..232
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 75..246 e-value: 8.5E-29 score: 102.2
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 39..72 e-value: 2.7E-6 score: 27.2
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 38..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G010110.1	CmoCh20G010110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding