CmoCh20G006250 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTGGGAAAAGCAAGGCGAATCATCATCACTCTTCAAGAACTCTCGTATCCCGGAAATGGACACTCTTCCTTTGCTTGGCTAGCTTTTGCTCTGGAATGCTCTTCACCAACAGGTTTCGAACTCAGATTATTACTCTCTCAAATGGGTTTCTTGTTTGTTTCTCGATTTCCTGCTTACTTTTCAATTCTGCGATTCTTAAACTATTCTGCTGATGTTTGGGAATATTGTGTTCTTTTCACCACGTTTGTTGGTTTGCCCAGATGATCCAAAAGGACGCGTGTTCTGTGATTTTGTTTTCTTCTTGTTCTTTTCTTCTCTCTCTCTCTCTCTCTCTCTCCTAATAATGAATGGGGAGTTTGGTGGGTCTCATGTTTGCTTCCTTTTTCTTGTTCTTTTTTTGATTCAATTGATTTGGAATTAGTATTACCAGCAATTGCATTTATCAATACTCTTCCCATATATGAACAACTTGCTAGACTGCGGTTGA ATGTGTGGGAAAAGCAAGGCGAATCATCATCACTCTTCAAGAACTCTCGTATCCCGGAAATGGACACTCTTCCTTTGCTTGGCTAGCTTTTGCTCTGGAATGCTCTTCACCAACAGGTTTCGAACTCAGATTATTACTCTCTCAAATGGGTTTCTTTATTACCAGCAATTGCATTTATCAATACTCTTCCCATATATGAACAACTTGCTAGACTGCGGTTGA ATGTGTGGGAAAAGCAAGGCGAATCATCATCACTCTTCAAGAACTCTCGTATCCCGGAAATGGACACTCTTCCTTTGCTTGGCTAGCTTTTGCTCTGGAATGCTCTTCACCAACAGGTTTCGAACTCAGATTATTACTCTCTCAAATGGGTTTCTTTATTACCAGCAATTGCATTTATCAATACTCTTCCCATATATGAACAACTTGCTAGACTGCGGTTGA MCGKSKANHHHSSRTLVSRKWTLFLCLASFCSGMLFTNRFRTQIITLSNGFLYYQQLHLSILFPYMNNLLDCG Homology
BLAST of CmoCh20G006250 vs. ExPASy Swiss-Prot
Match: A8MRC7 (Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=B3GALT2 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 9.7e-06 Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 0
BLAST of CmoCh20G006250 vs. ExPASy Swiss-Prot
Match: Q9SAA4 (Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=B3GALT1 PE=2 SV=2) HSP 1 Score: 45.8 bits (107), Expect = 2.4e-04 Identity = 28/73 (38.36%), Postives = 40/73 (54.79%), Query Frame = 0
BLAST of CmoCh20G006250 vs. ExPASy Swiss-Prot
Match: Q8LEJ9 (Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=B3GALT4 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 3.1e-04 Identity = 19/37 (51.35%), Postives = 28/37 (75.68%), Query Frame = 0
BLAST of CmoCh20G006250 vs. ExPASy TrEMBL
Match: A0A6J1FY57 (Hexosyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111448367 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.5e-14 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of CmoCh20G006250 vs. ExPASy TrEMBL
Match: A0A6J1JFR4 (Hexosyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111484098 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 4.5e-14 Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of CmoCh20G006250 vs. ExPASy TrEMBL
Match: A0A6J1JG64 (Hexosyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111484098 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 4.5e-14 Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of CmoCh20G006250 vs. ExPASy TrEMBL
Match: A0A5A7UZG6 (Hexosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4837G00040 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 9.1e-07 Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of CmoCh20G006250 vs. ExPASy TrEMBL
Match: A0A0A0LQE6 (Hexosyltransferase OS=Cucumis sativus OX=3659 GN=Csa_2G418850 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 9.1e-07 Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of CmoCh20G006250 vs. NCBI nr
Match: XP_023512497.1 (probable beta-1,3-galactosyltransferase 2 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 87.0 bits (214), Expect = 7.1e-14 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of CmoCh20G006250 vs. NCBI nr
Match: XP_023512498.1 (probable beta-1,3-galactosyltransferase 2 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 87.0 bits (214), Expect = 7.1e-14 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of CmoCh20G006250 vs. NCBI nr
Match: XP_022943690.1 (probable beta-1,3-galactosyltransferase 2 [Cucurbita moschata]) HSP 1 Score: 87.0 bits (214), Expect = 7.1e-14 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of CmoCh20G006250 vs. NCBI nr
Match: XP_023512500.1 (probable beta-1,3-galactosyltransferase 2 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 87.0 bits (214), Expect = 7.1e-14 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of CmoCh20G006250 vs. NCBI nr
Match: KAG6570885.1 (NEDD8-activating enzyme E1 regulatory subunit AXR1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 87.0 bits (214), Expect = 7.1e-14 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of CmoCh20G006250 vs. TAIR 10
Match: AT1G05170.1 (Galactosyltransferase family protein ) HSP 1 Score: 50.4 bits (119), Expect = 6.9e-07 Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 0
BLAST of CmoCh20G006250 vs. TAIR 10
Match: AT1G05170.2 (Galactosyltransferase family protein ) HSP 1 Score: 50.4 bits (119), Expect = 6.9e-07 Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 0
BLAST of CmoCh20G006250 vs. TAIR 10
Match: AT1G11730.1 (Galactosyltransferase family protein ) HSP 1 Score: 45.8 bits (107), Expect = 1.7e-05 Identity = 28/73 (38.36%), Postives = 40/73 (54.79%), Query Frame = 0
BLAST of CmoCh20G006250 vs. TAIR 10
Match: AT4G26940.1 (Galactosyltransferase family protein ) HSP 1 Score: 45.4 bits (106), Expect = 2.2e-05 Identity = 19/37 (51.35%), Postives = 28/37 (75.68%), Query Frame = 0
BLAST of CmoCh20G006250 vs. TAIR 10
Match: AT4G26940.2 (Galactosyltransferase family protein ) HSP 1 Score: 45.4 bits (106), Expect = 2.2e-05 Identity = 19/37 (51.35%), Postives = 28/37 (75.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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