CmoCh20G004390 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G004390
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Cmo_Chr20: 2050641 .. 2053367 (-)
RNA-Seq Expression	CmoCh20G004390
Synteny	CmoCh20G004390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTGATGGTTTTACAACTAATGTTAGAAACCTGGCTAATGCTCGTTATAGTTGAATGGATATACTTCTCTTACTACATAGAAGGAACGGTTCGTTTGAAATTTGTGAGATTCCATATCAGTTGGAAGGAAAACGTAGCATTTTTTATAAGGGTGTAGAAATCTTTCTAGATGTGTTTTAAAACCGTGAGGCTGACGATGATTATCAAATCAAAACATATAATATCAGCTCGCAATTGGTTTGGACTCTAGACTGTTATAGAATCTGATTAGATATCTAATAGTTGAGTTTGATTTTCTTTTATTTTATAATCCTTCCTTTTATTTTCTTTATTTCTTACTATTTTACAATTTATTATTATTATATTCCATTTTTGAGCACTTATTAATATATGAAAAGTAAATTAAAATTTAAGATATATTATTATTTTATTAATAAATTATTATAATGGTATAAGATTTATAAATATAAATTTTAAAATATATGTTTTACTAAATATTTAAATATTTACCATTAAGCTTATATAAATAAAACCTCAATTTGCACATAATACTGAACCTTGAGCTTTTCGGCTCAAATTTGTTACCCGCGTCTCAGTTTCTTGTTCTTGCTTCCACATTTTTTTTTTCAGTCAAGTATGCGATTGGGGGCGTTCCTCTCGGGGTATAGGCTCATTCAAGCATTTCGTCGAACAGTTTCTAGCACTTCTTCGGCGGTTAATACAGTCCCCTTTCGATTCAATTTTCTTTGCACTCAAATCTCCGATAACTCATCGGGGAAAGTTTTAGATTCAGAATTGGAGGGACCCAAGTGCTTATCATTGAGAATTGAGAGAATACCGAAGGGAGAAACGGTTGGGTATGCCTTCAGGAGCTGGATGGGCGATGGCTTTCCTATTCATCGTGGCGATATTTTTCATGCTATCAATCGCCTCAGGAAGCTCGAAAGGAACAAGCACGCGCTTGAGGTTGCTACATCTATCTCCCTCTTTAAAGCTCCATTTTCGTTTGCTGTTTTTCTTAGATGTTGTGAATTTTAATCTGCATCACAGTTGAGTTGGCTGATATCTTTTAAGAATGTAATCCAGAGAAGAACTTGAAAAATAGCAGTTTCAAGTGTTTGCTTAAATCATTAAGAAGCTGAAAGTTTCAGAAATGGTGAATTTGGATGCAATATCTTCTCCACGGATCATGAAAATTGCACATAAGTAAAGACTATGGGGATGTTAAGCGGAAGATTGTATTTTCTTAACTTTCCATTAGATTTCATCACTGCATAATGCATAGAAGAGAACATTGTTTTTTCTTGATTACTCTATTTCTTAGTGTAATGCTGTGTGCTTTTAGTTCATTTTACTTATAGTAGAGTCACTATGATGTAGTATACCAGGCCTGCTTTATAATATAAGATTCATCTTCTGTTAACAGGGCTCCTTTTGTTAATTTGGATTTGTCTTCTGTTCTTGGCAGGTTATGGAGTGGGTGATCAGGGAGAAACCATATCGGATAAATGAATTGGACTACTCCTATTTGCTGGAATTTACAATCAAACACCATGGCATATCACAAGGTGAGAAGCTCTTTTCTAACATCCCTGTGGAATTTCAAGGAGAGTTGCTCTTCAACAATCTTGTGATTGCATGTTTAGATAAGGGAGCTATTAGACTTTCACTGGCTTACATGAGAAAAATGAGGGAAGTTTCCCATCGCATATCACACTTAGTTTTTAACCGCCTCATTATACTCCACTCGTCTCCCCGTCGTCGGAAACTTATCCCGAAAATTCTTACTCAGATGAAGGCTGATAAAGTGCCTTTACATGTTTCTACATATAACATTCTTATGAAAATAGAAGCCAATGAGCACAATATTGAAGGGTTGATGAAAGTATTTGGTGATATGAAACAAGCTAAAGTTGAACCAAATGAGGTGTCTTACTGCATAGTAGCTACTGCACACGCCGTGGCAAAGTTGTATACTGTAGCTGAAGCCTACACCGAGGCTATCGAAAAATCTTTCGCTGGGAGTAATTGGTCGACCTATGATGTCCTAATCATCTTGTATGGCTATTTGAAGAAGGAGAAAGAGCTAGAGAGGACTTGGGGTACCATACAAGGATTGCCCCACATCCCATCTAAAAGTTTTATACTAGCTATTGAAGCATTTGGTAAAATTGGTTTACTAAGCCGAGCAGAAGAGCTCTGGTTAGAGATGAAAACCATAAGAGGAATTAAAGCCACAGATCAACTCAATTCTATTTTATCTGTGTATTGCAAACACGGTTTGATTAAAAAGGCAACAGAAATCTTTAGGGAAATTGAAGCAAATGGGTGCGAACCAAACGCCATAACCTTTCGAAACCTGGCTTTAGGCTGCTTGAAAGCTGGCTTGGTGGAGGAAGGCATGAAAACACTAGATCTTGGATCAAATATAAGAAGCAGCAGCAGGAGAATTAGAATGTCAACTCCATGGTTGGAAACCACTCTTTCAATGATTGAAATTTTGGCAGAGAGGGGAGACGTTGAAAATACTGAAAAGTTATTCGAGGAACTCAAGGAAGCGAAGTATACAAGGTACACATTCGTTTACAACACTTTGTTAAGGGCTTACGTGAAGGCCAAGATTCATAATCCAAATCTTTTGAGGAGGATGATCATAGGAGGAGCTAGGCCTGATTCTGAAACCTACAGTTTGATCAAACTTACTGAGCAGTTTCAAAGCTAA

mRNA sequence

ATGCAGTCAAGTATGCGATTGGGGGCGTTCCTCTCGGGGTATAGGCTCATTCAAGCATTTCGTCGAACAGTTTCTAGCACTTCTTCGGCGGTTAATACAGTCCCCTTTCGATTCAATTTTCTTTGCACTCAAATCTCCGATAACTCATCGGGGAAAGTTTTAGATTCAGAATTGGAGGGACCCAAGTGCTTATCATTGAGAATTGAGAGAATACCGAAGGGAGAAACGGTTGGGTATGCCTTCAGGAGCTGGATGGGCGATGGCTTTCCTATTCATCGTGGCGATATTTTTCATGCTATCAATCGCCTCAGGAAGCTCGAAAGGAACAAGCACGCGCTTGAGGTTGCTACATCTATCTCCCTCTTTAAAGCTCCATTTTCGTTTGCTGTTATGGAGTGGGTGATCAGGGAGAAACCATATCGGATAAATGAATTGGACTACTCCTATTTGCTGGAATTTACAATCAAACACCATGGCATATCACAAGGTGAGAAGCTCTTTTCTAACATCCCTGTGGAATTTCAAGGAGAGTTGCTCTTCAACAATCTTGTGATTGCATGTTTAGATAAGGGAGCTATTAGACTTTCACTGGCTTACATGAGAAAAATGAGGGAAGTTTCCCATCGCATATCACACTTAGTTTTTAACCGCCTCATTATACTCCACTCGTCTCCCCGTCGTCGGAAACTTATCCCGAAAATTCTTACTCAGATGAAGGCTGATAAAGTGCCTTTACATGTTTCTACATATAACATTCTTATGAAAATAGAAGCCAATGAGCACAATATTGAAGGGTTGATGAAAGTATTTGGTGATATGAAACAAGCTAAAGTTGAACCAAATGAGGTGTCTTACTGCATAGTAGCTACTGCACACGCCGTGGCAAAGTTGTATACTGTAGCTGAAGCCTACACCGAGGCTATCGAAAAATCTTTCGCTGGGAGTAATTGGTCGACCTATGATGTCCTAATCATCTTGTATGGCTATTTGAAGAAGGAGAAAGAGCTAGAGAGGACTTGGGGTACCATACAAGGATTGCCCCACATCCCATCTAAAAGTTTTATACTAGCTATTGAAGCATTTGGTAAAATTGGTTTACTAAGCCGAGCAGAAGAGCTCTGGTTAGAGATGAAAACCATAAGAGGAATTAAAGCCACAGATCAACTCAATTCTATTTTATCTGTGTATTGCAAACACGGTTTGATTAAAAAGGCAACAGAAATCTTTAGGGAAATTGAAGCAAATGGGTGCGAACCAAACGCCATAACCTTTCGAAACCTGGCTTTAGGCTGCTTGAAAGCTGGCTTGGTGGAGGAAGGCATGAAAACACTAGATCTTGGATCAAATATAAGAAGCAGCAGCAGGAGAATTAGAATGTCAACTCCATGGTTGGAAACCACTCTTTCAATGATTGAAATTTTGGCAGAGAGGGGAGACGTTGAAAATACTGAAAAGTTATTCGAGGAACTCAAGGAAGCGAAGTATACAAGGTACACATTCGTTTACAACACTTTGTTAAGGGCTTACGTGAAGGCCAAGATTCATAATCCAAATCTTTTGAGGAGGATGATCATAGGAGGAGCTAGGCCTGATTCTGAAACCTACAGTTTGATCAAACTTACTGAGCAGTTTCAAAGCTAA

Coding sequence (CDS)

ATGCAGTCAAGTATGCGATTGGGGGCGTTCCTCTCGGGGTATAGGCTCATTCAAGCATTTCGTCGAACAGTTTCTAGCACTTCTTCGGCGGTTAATACAGTCCCCTTTCGATTCAATTTTCTTTGCACTCAAATCTCCGATAACTCATCGGGGAAAGTTTTAGATTCAGAATTGGAGGGACCCAAGTGCTTATCATTGAGAATTGAGAGAATACCGAAGGGAGAAACGGTTGGGTATGCCTTCAGGAGCTGGATGGGCGATGGCTTTCCTATTCATCGTGGCGATATTTTTCATGCTATCAATCGCCTCAGGAAGCTCGAAAGGAACAAGCACGCGCTTGAGGTTGCTACATCTATCTCCCTCTTTAAAGCTCCATTTTCGTTTGCTGTTATGGAGTGGGTGATCAGGGAGAAACCATATCGGATAAATGAATTGGACTACTCCTATTTGCTGGAATTTACAATCAAACACCATGGCATATCACAAGGTGAGAAGCTCTTTTCTAACATCCCTGTGGAATTTCAAGGAGAGTTGCTCTTCAACAATCTTGTGATTGCATGTTTAGATAAGGGAGCTATTAGACTTTCACTGGCTTACATGAGAAAAATGAGGGAAGTTTCCCATCGCATATCACACTTAGTTTTTAACCGCCTCATTATACTCCACTCGTCTCCCCGTCGTCGGAAACTTATCCCGAAAATTCTTACTCAGATGAAGGCTGATAAAGTGCCTTTACATGTTTCTACATATAACATTCTTATGAAAATAGAAGCCAATGAGCACAATATTGAAGGGTTGATGAAAGTATTTGGTGATATGAAACAAGCTAAAGTTGAACCAAATGAGGTGTCTTACTGCATAGTAGCTACTGCACACGCCGTGGCAAAGTTGTATACTGTAGCTGAAGCCTACACCGAGGCTATCGAAAAATCTTTCGCTGGGAGTAATTGGTCGACCTATGATGTCCTAATCATCTTGTATGGCTATTTGAAGAAGGAGAAAGAGCTAGAGAGGACTTGGGGTACCATACAAGGATTGCCCCACATCCCATCTAAAAGTTTTATACTAGCTATTGAAGCATTTGGTAAAATTGGTTTACTAAGCCGAGCAGAAGAGCTCTGGTTAGAGATGAAAACCATAAGAGGAATTAAAGCCACAGATCAACTCAATTCTATTTTATCTGTGTATTGCAAACACGGTTTGATTAAAAAGGCAACAGAAATCTTTAGGGAAATTGAAGCAAATGGGTGCGAACCAAACGCCATAACCTTTCGAAACCTGGCTTTAGGCTGCTTGAAAGCTGGCTTGGTGGAGGAAGGCATGAAAACACTAGATCTTGGATCAAATATAAGAAGCAGCAGCAGGAGAATTAGAATGTCAACTCCATGGTTGGAAACCACTCTTTCAATGATTGAAATTTTGGCAGAGAGGGGAGACGTTGAAAATACTGAAAAGTTATTCGAGGAACTCAAGGAAGCGAAGTATACAAGGTACACATTCGTTTACAACACTTTGTTAAGGGCTTACGTGAAGGCCAAGATTCATAATCCAAATCTTTTGAGGAGGATGATCATAGGAGGAGCTAGGCCTGATTCTGAAACCTACAGTTTGATCAAACTTACTGAGCAGTTTCAAAGCTAA

Protein sequence

MQSSMRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCLSLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKAPFSFAVMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQS

Homology

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BLAST of CmoCh20G004390 vs. ExPASy Swiss-Prot
Match: Q940Q2 (Pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g07590 PE=2 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 1.0e-192
Identity = 335/535 (62.62%), Postives = 419/535 (78.32%), Query Frame = 0


Query: 17  IQAFRRTVSSTSSAVNTVPFR-FNFLCTQISDNSSGKVL-----DSELEGPKCLSLRIER 76
           +QA RRT    S A+N   F+  +FL T IS   S +       + E E  KCLSLRIE+
Sbjct: 15  VQAIRRTTCVASPALNQTNFQASSFLTTLISSKKSPEETCIGSEEEEEEPNKCLSLRIEK 74

Query: 77  IPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKAPFSFAV 136
           +PKG TVG A +SWMGDGFP+H GD++HAINRLRKL RNK ALE               +
Sbjct: 75  LPKGVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALE---------------L 134

Query: 137 MEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDK 196
           MEW+IRE+PYR+ EL+YSYLLEFT+K HG+SQGEKLF+ +P EFQ ELL+NNLVIACLD+
Sbjct: 135 MEWIIRERPYRLGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQ 194

Query: 197 GAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTY 256
           G IRL+L YM+KMRE+ +R SHLV+NRLII +S+P RRKLI K L  MKADK   HVSTY
Sbjct: 195 GVIRLALEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTY 254

Query: 257 NILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEK 316
           +ILMK+EANEHNI+G++K F  MK+A VEPNEVSYCI+A AHAVA+LYTVAEAYTE IEK
Sbjct: 255 HILMKLEANEHNIDGVLKAFDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEK 314

Query: 317 SFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLLSRA 376
           S  G NWST D+L+ILYG L KEKEL RTW  I+G  H+ SKS++LA EAF ++G L RA
Sbjct: 315 SITGDNWSTLDILMILYGRLGKEKELARTWNVIRGFHHVRSKSYLLATEAFARVGNLDRA 374

Query: 377 EELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALG 436
           EELWLEMK ++G+K T+Q NS+LSVYCK GLI+KA  +FRE+  NG +PN+IT+R+LALG
Sbjct: 375 EELWLEMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALG 434

Query: 437 CLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEEL 496
           C KA L++E +K +++G N++ +S+ I  STPWLETTLS+IE  AE+GDVEN+EKLFEE+
Sbjct: 435 CAKAKLMKEALKNIEMGLNLK-TSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEV 494

Query: 497 KEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQ 546
           K AKY RY FVYN L +AYVKAK+++PNL +RM++GGARPD+E+YSL+KL EQ++
Sbjct: 495 KNAKYNRYAFVYNALFKAYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLVEQYK 533

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BLAST of CmoCh20G004390 vs. ExPASy Swiss-Prot
Match: Q9C977 (Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80270 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.1e-42
Identity = 115/440 (26.14%), Postives = 223/440 (50.68%), Query Frame = 0


Query: 74  GETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKAPFSFAVMEW 133
           G ++G A   W+ +G  I R +I  A+ +LR+      AL+++               EW
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMS---------------EW 200

Query: 134 VIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAI 193
           +   K   + E DY+  L+ T+K  G+ +GE     IP  F+GE+L+  L+  C+  G +
Sbjct: 201 LEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNV 260

Query: 194 RLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNIL 253
           + S     KM+++   +S    +++++LH    R+K I  +L  M+ + +   + TY IL
Sbjct: 261 KKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRKK-IADVLLLMEKENIKPSLLTYKIL 320

Query: 254 MKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSFA 313
           + ++   ++I G+ ++   MK   VE +  +  + A  ++ A L   AE   + +E    
Sbjct: 321 IDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESL 380

Query: 314 GSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLLSRAEEL 373
            +N   +  L+ +Y  L +E E++R W   +  P+   +  + AI+AFGK+  +  AE +
Sbjct: 381 EANRRAFKDLLSIYASLGREDEVKRIWKICESKPYF--EESLAAIQAFGKLNKVQEAEAI 440

Query: 374 WLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALGCLK 433
           + ++  +    ++   + +L VY  H ++ K  ++ + +  +GC   A T+  L    ++
Sbjct: 441 FEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVE 500

Query: 434 AGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEA 493
           AG VE+    LD  S  + S  ++ M+     + + +++  ++RGDV NTEK+F +++EA
Sbjct: 501 AGEVEKADSLLDKAS--KQSHTKLMMN-----SFMYIMDEYSKRGDVHNTEKIFLKMREA 555

Query: 494 KYTRYTFVYNTLLRAYVKAK 514
            YT     +  L++AY+ AK
Sbjct: 561 GYTSRLRQFQALMQAYINAK 555

[Close]

BLAST of CmoCh20G004390 vs. ExPASy Swiss-Prot
Match: Q9XI21 (Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g15480 PE=2 SV=2)

HSP 1 Score: 169.5 bits (428), Expect = 1.1e-40
Identity = 118/472 (25.00%), Postives = 227/472 (48.09%), Query Frame = 0


Query: 74  GETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKAPFSFAVMEW 133
           G +VG A   W+  G   +R +   A+ +LRK      AL++                EW
Sbjct: 139 GLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMT---------------EW 198

Query: 134 VIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAI 193
           +   K + + E DY+  L+   K  G  +GE     IP  F+GEL++  L+   +    +
Sbjct: 199 LDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNV 258

Query: 194 RLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNIL 253
           R + A   KM+++   +S    N+++IL+    ++K I  +L  ++ + +  +++TY IL
Sbjct: 259 RTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKKK-IADVLLLLEKENLKPNLNTYKIL 318

Query: 254 MKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSFA 313
           +  + + ++I G+ ++   MK   VE +  +  ++A  +A A L   AE   + +E    
Sbjct: 319 IDTKGSSNDITGMEQIVETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESL 378

Query: 314 GSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLLSRAEEL 373
             N      L+ +YGYL++E E+ R W   +  P       + AI AFGKI  +  AE +
Sbjct: 379 EENRHMCKDLLSVYGYLQREDEVRRVWKICEENPRY--NEVLAAILAFGKIDKVKDAEAV 438

Query: 374 WLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALGCLK 433
           + ++  +    +++  + +L VY  H ++ +  ++ +++  +GC   A+T+  +    ++
Sbjct: 439 FEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVE 498

Query: 434 AGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEA 493
           AG VE+   +L       S + + +   P + + + ++     RGDV NTEK+F+ +K+A
Sbjct: 499 AGEVEKAESSL-------SKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQA 558

Query: 494 KYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQ 546
            Y    + Y TL++AYV AK     +  RM      P+    + +   + F+
Sbjct: 559 GYQSRFWAYQTLIQAYVNAKAPAYGMKERMKADNIFPNKRLAAQLAKADPFK 585

[Close]

BLAST of CmoCh20G004390 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 4.8e-33
Identity = 114/465 (24.52%), Postives = 211/465 (45.38%), Query Frame = 0


Query: 82  RSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKAPFSFAVMEWVIREKPYR 141
           R W  +G  + + ++   +  LRK++R KHALE+                EW++ ++  +
Sbjct: 82  RKWKEEGHSVRKYELNRIVRELRKIKRYKHALEIC---------------EWMVVQEDIK 141

Query: 142 INELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMR 201
           +   DY+  L+   K  G++  EK F ++P + +G     +L+ + +       + A   
Sbjct: 142 LQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFE 201

Query: 202 KMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNILMKIEANEH 261
           KM E     S L +N ++ ++ S  + + +P ++ ++K    P  + TYN+ +   A+ +
Sbjct: 202 KMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSP-DIVTYNLWLTAFASGN 261

Query: 262 NIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSFAGSNWSTYD 321
           ++EG  KV+   K+ K+ P+ V+Y ++   +A       A    + +EK  +  N   Y 
Sbjct: 262 DVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYA 321

Query: 322 VLIILYGYLKKEKELERTWGTIQ-GLPHIPSKSFILAIEAFGKIGLLSRAEELWLEMKTI 381
            LI L+  L  +  +  TW  ++     +    ++  I A  K+G   +A+ L+ E +++
Sbjct: 322 SLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESV 381

Query: 382 RGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALGCLKAGLVEEG 441
            G       N IL+ Y     +    + +  I   G  P+  T+  L    LK   +E  
Sbjct: 382 SGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDME-- 441

Query: 442 MKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEAKYTRYTF 501
            K LD       S ++  ++   ++     +E   E+G+V+  EKL   L++A Y   T 
Sbjct: 442 -KVLDCFGKAIDSVKKWTVNVRLVKGACKELE---EQGNVKGAEKLMTLLQKAGYVN-TQ 501

Query: 502 VYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQ 546
           +YN+LLR Y KA      +  RM       D ET  LI+LT Q +
Sbjct: 502 LYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELIRLTSQMR 523

[Close]

BLAST of CmoCh20G004390 vs. ExPASy Swiss-Prot
Match: Q9LRP6 (Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g15590 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 4.7e-28
Identity = 111/478 (23.22%), Postives = 211/478 (44.14%), Query Frame = 0


Query: 69  ERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKAPFSF 128
           E I   ++V +    W+ +G  + + ++  AI+ LRK  R  +A+               
Sbjct: 149 ESIVAYKSVKHVLEKWVKEGKDLSQAEVTLAIHNLRK--RKSYAM-------------CL 208

Query: 129 AVMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACL 188
            + EW+     +   E +Y+  L+   K H + + E    +IP   +GE+++  L+  C+
Sbjct: 209 QLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCV 268

Query: 189 DKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVS 248
            K  +  +     KM+E+    S    N+L++L+S   R+K I  +L  M+ + +    +
Sbjct: 269 LKHHVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMHDRKK-ISDVLLLMERENIKPSRA 328

Query: 249 TYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAYTEAI 308
           TY+ L+  +    +I G+ K+   +K+  +E +     I+A  +  A L   A+   + I
Sbjct: 329 TYHFLINSKGLAGDITGMEKIVETIKEEGIELDPELQSILAKYYIRAGLKERAQDLMKEI 388

Query: 309 E-KSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLL 368
           E K    + W     L+ LY  +     + R    +   P     + I AI+A+GK+  +
Sbjct: 389 EGKGLQQTPWVCRS-LLPLYADIGDSDNVRRLSRFVDQNPRY--DNCISAIKAWGKLKEV 448

Query: 369 SRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNL 428
             AE ++  +     I       +++ +Y ++ ++ K  ++ + +   G      T+  L
Sbjct: 449 EEAEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHAL 508

Query: 429 ALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLF 488
               +KAG  E G   L L    + +  R     P   T ++++E  A+RGDV NTEK+F
Sbjct: 509 VKLYIKAG--EVGKAELILNRATKDNKMR-----PMFTTYMAILEEYAKRGDVHNTEKVF 568

Query: 489 EELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQ 546
            ++K A Y      Y T+L AY+ AK     ++ RM      P+    + +     F+
Sbjct: 569 MKMKRASYAAQLMQYETVLLAYINAKTPAYGMIERMKADNVFPNKSLAAKLAQVNPFK 600

[Close]

BLAST of CmoCh20G004390 vs. ExPASy TrEMBL
Match: A0A6J1FT35 (pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111448520 PE=4 SV=1)

HSP 1 Score: 1033.1 bits (2670), Expect = 4.2e-298
Identity = 527/542 (97.23%), Postives = 527/542 (97.23%), Query Frame = 0


Query: 5   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL 64
           MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL
Sbjct: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL 60

Query: 65  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKA 124
           SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALE          
Sbjct: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALE---------- 120

Query: 125 PFSFAVMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 184
                VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV
Sbjct: 121 -----VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 180

Query: 185 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP 244
           IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP
Sbjct: 181 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP 240

Query: 245 LHVSTYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAY 304
           LHVSTYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAY
Sbjct: 241 LHVSTYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAY 300

Query: 305 TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 364
           TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI
Sbjct: 301 TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 360

Query: 365 GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 424
           GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF
Sbjct: 361 GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 420

Query: 425 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 484
           RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE
Sbjct: 421 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 480

Query: 485 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 544
           KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF
Sbjct: 481 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 527

Query: 545 QS 547
           QS
Sbjct: 541 QS 527

[Close]

BLAST of CmoCh20G004390 vs. ExPASy TrEMBL
Match: A0A6J1J8P8 (pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484462 PE=4 SV=1)

HSP 1 Score: 1016.1 bits (2626), Expect = 5.3e-293
Identity = 517/542 (95.39%), Postives = 521/542 (96.13%), Query Frame = 0


Query: 5   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL 64
           MRLGA LSGYRLIQAFRRTVSSTSS VNT+PFRFNFLCTQI DNSSGKVL+SELEGPKCL
Sbjct: 1   MRLGAILSGYRLIQAFRRTVSSTSSVVNTIPFRFNFLCTQIPDNSSGKVLESELEGPKCL 60

Query: 65  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKA 124
           SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALE          
Sbjct: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALE---------- 120

Query: 125 PFSFAVMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 184
                VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV
Sbjct: 121 -----VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 180

Query: 185 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP 244
           IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRK+IPKILTQMKADKVP
Sbjct: 181 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKIIPKILTQMKADKVP 240

Query: 245 LHVSTYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAY 304
           LHVSTYNILMKIEANEHNIEGLMKVFGDMK+A VEPNEVSYCIVATAHAVAKLYTVAEAY
Sbjct: 241 LHVSTYNILMKIEANEHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAY 300

Query: 305 TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 364
           TEAIEKS AGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI
Sbjct: 301 TEAIEKSIAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 360

Query: 365 GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 424
           GLLSRAEELWLEMKT RGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF
Sbjct: 361 GLLSRAEELWLEMKTKRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 420

Query: 425 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 484
           RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE
Sbjct: 421 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 480

Query: 485 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 544
           KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF
Sbjct: 481 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 527

Query: 545 QS 547
           QS
Sbjct: 541 QS 527

[Close]

BLAST of CmoCh20G004390 vs. ExPASy TrEMBL
Match: A0A5A7V3P3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G001110 PE=4 SV=1)

HSP 1 Score: 935.6 bits (2417), Expect = 9.1e-269
Identity = 471/542 (86.90%), Postives = 494/542 (91.14%), Query Frame = 0


Query: 5   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL 64
           MR G F SGYRLIQAFRRTVSST S V T+PFRFNFLCTQI DN S    +SELEGPKCL
Sbjct: 1   MRTGDFFSGYRLIQAFRRTVSSTPSTVGTIPFRFNFLCTQIPDNLSANFSESELEGPKCL 60

Query: 65  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKA 124
           SLRIERIPKGE+VGYAFRSWMGDGFPIHRGDIFH INRLRK ERNK ALE          
Sbjct: 61  SLRIERIPKGESVGYAFRSWMGDGFPIHRGDIFHTINRLRKFERNKRALE---------- 120

Query: 125 PFSFAVMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 184
                VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV
Sbjct: 121 -----VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 180

Query: 185 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP 244
           IACLDKGAIRLSLAYMRKMREV H ISHLVFNRLIILHSS RRRK+IPKIL+QMKADKVP
Sbjct: 181 IACLDKGAIRLSLAYMRKMREVGHSISHLVFNRLIILHSSFRRRKIIPKILSQMKADKVP 240

Query: 245 LHVSTYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAY 304
           LHVSTYNILMKIEANEHN+EGLM+VF DMK+AKVEPNEVSYCIVATAHAVAKLY V EAY
Sbjct: 241 LHVSTYNILMKIEANEHNVEGLMRVFSDMKRAKVEPNEVSYCIVATAHAVAKLYIVVEAY 300

Query: 305 TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 364
            EAIEKS AG+NWSTYDVLIILYGYLKKEKELERTWGTIQG PHIPSKSFILAIEAFG+I
Sbjct: 301 VEAIEKSIAGNNWSTYDVLIILYGYLKKEKELERTWGTIQGFPHIPSKSFILAIEAFGRI 360

Query: 365 GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 424
           GLLSRAEELWLEMKT RGIKATDQ NSILSVYC+HGLIKKATEIFR+IE NGC+PNAITF
Sbjct: 361 GLLSRAEELWLEMKTKRGIKATDQFNSILSVYCRHGLIKKATEIFRKIEENGCKPNAITF 420

Query: 425 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 484
           R+LALGCLKAGLVEE +KTLDLGSN  SS++ +R STPWLETTLSMIEILAERGD+ENTE
Sbjct: 421 RHLALGCLKAGLVEEALKTLDLGSNTTSSTKIVRKSTPWLETTLSMIEILAERGDIENTE 480

Query: 485 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 544
           KLF+ELKEAKYTRYTFVYN L++AYVKAKIHNPNLLRRMIIGGARPDSETYSLIKL+EQF
Sbjct: 481 KLFKELKEAKYTRYTFVYNILIKAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLSEQF 527

Query: 545 QS 547
           QS
Sbjct: 541 QS 527

[Close]

BLAST of CmoCh20G004390 vs. ExPASy TrEMBL
Match: A0A1S3CKS5 (pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502083 PE=4 SV=1)

HSP 1 Score: 935.6 bits (2417), Expect = 9.1e-269
Identity = 471/542 (86.90%), Postives = 494/542 (91.14%), Query Frame = 0


Query: 5   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL 64
           MR G F SGYRLIQAFRRTVSST S V T+PFRFNFLCTQI DN S    +SELEGPKCL
Sbjct: 1   MRTGDFFSGYRLIQAFRRTVSSTPSTVGTIPFRFNFLCTQIPDNLSANFSESELEGPKCL 60

Query: 65  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKA 124
           SLRIERIPKGE+VGYAFRSWMGDGFPIHRGDIFH INRLRK ERNK ALE          
Sbjct: 61  SLRIERIPKGESVGYAFRSWMGDGFPIHRGDIFHTINRLRKFERNKRALE---------- 120

Query: 125 PFSFAVMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 184
                VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV
Sbjct: 121 -----VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 180

Query: 185 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP 244
           IACLDKGAIRLSLAYMRKMREV H ISHLVFNRLIILHSS RRRK+IPKIL+QMKADKVP
Sbjct: 181 IACLDKGAIRLSLAYMRKMREVGHSISHLVFNRLIILHSSFRRRKIIPKILSQMKADKVP 240

Query: 245 LHVSTYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAY 304
           LHVSTYNILMKIEANEHN+EGLM+VF DMK+AKVEPNEVSYCIVATAHAVAKLY V EAY
Sbjct: 241 LHVSTYNILMKIEANEHNVEGLMRVFSDMKRAKVEPNEVSYCIVATAHAVAKLYIVVEAY 300

Query: 305 TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 364
            EAIEKS AG+NWSTYDVLIILYGYLKKEKELERTWGTIQG PHIPSKSFILAIEAFG+I
Sbjct: 301 VEAIEKSIAGNNWSTYDVLIILYGYLKKEKELERTWGTIQGFPHIPSKSFILAIEAFGRI 360

Query: 365 GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 424
           GLLSRAEELWLEMKT RGIKATDQ NSILSVYC+HGLIKKATEIFR+IE NGC+PNAITF
Sbjct: 361 GLLSRAEELWLEMKTKRGIKATDQFNSILSVYCRHGLIKKATEIFRKIEENGCKPNAITF 420

Query: 425 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 484
           R+LALGCLKAGLVEE +KTLDLGSN  SS++ +R STPWLETTLSMIEILAERGD+ENTE
Sbjct: 421 RHLALGCLKAGLVEEALKTLDLGSNTTSSTKIVRKSTPWLETTLSMIEILAERGDIENTE 480

Query: 485 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 544
           KLF+ELKEAKYTRYTFVYN L++AYVKAKIHNPNLLRRMIIGGARPDSETYSLIKL+EQF
Sbjct: 481 KLFKELKEAKYTRYTFVYNILIKAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLSEQF 527

Query: 545 QS 547
           QS
Sbjct: 541 QS 527

[Close]

BLAST of CmoCh20G004390 vs. ExPASy TrEMBL
Match: A0A0A0KFE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190380 PE=4 SV=1)

HSP 1 Score: 934.9 bits (2415), Expect = 1.6e-268
Identity = 471/542 (86.90%), Postives = 497/542 (91.70%), Query Frame = 0


Query: 5   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL 64
           M  G+F SGYRLIQAFRRTVSST SAV+T+PFRFNFLCTQI  N S  VL+SELE PKCL
Sbjct: 1   MPTGSFFSGYRLIQAFRRTVSSTPSAVSTIPFRFNFLCTQIPGNLSPNVLESELEEPKCL 60

Query: 65  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKA 124
           SLRIERIPKGE VGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNK ALE          
Sbjct: 61  SLRIERIPKGELVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKRALE---------- 120

Query: 125 PFSFAVMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 184
                VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV
Sbjct: 121 -----VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 180

Query: 185 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP 244
           IACLDKGAIRLSLAYMRKMREV H ISHLVFNRLIILHSS RRRK+IPKIL+QMKADKVP
Sbjct: 181 IACLDKGAIRLSLAYMRKMREVGHSISHLVFNRLIILHSSFRRRKIIPKILSQMKADKVP 240

Query: 245 LHVSTYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAY 304
           LHVSTYNILMKIEANEHNIEGLM+VF DM++AKVEPNEVSYCIVATAHAVAKLYTV EAY
Sbjct: 241 LHVSTYNILMKIEANEHNIEGLMRVFSDMRRAKVEPNEVSYCIVATAHAVAKLYTVVEAY 300

Query: 305 TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 364
            EA+EKS AG+NWSTYDVLIILYGYL KEKELERTWG IQG PHIPSKSFILAIEAFG+I
Sbjct: 301 VEALEKSIAGNNWSTYDVLIILYGYLNKEKELERTWGIIQGFPHIPSKSFILAIEAFGRI 360

Query: 365 GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 424
           GLLSRAEELWLEMKT RGIKATDQ NSILSVYC+HGLIKKATEIFR+IEANGC+PNAITF
Sbjct: 361 GLLSRAEELWLEMKTKRGIKATDQFNSILSVYCRHGLIKKATEIFRKIEANGCKPNAITF 420

Query: 425 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 484
           R+LA GCLKAGLVEE +KTLDLGSN  SS++ +R STPWLETTLSMIEILAERGD+ENTE
Sbjct: 421 RHLAFGCLKAGLVEEALKTLDLGSNTTSSTKIVRKSTPWLETTLSMIEILAERGDIENTE 480

Query: 485 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 544
           KLF+ELKEAKYTRYTFVYNTL++AYVKAKIHNPNLLRRMI+GGARPDSETYSLIKL+EQF
Sbjct: 481 KLFKELKEAKYTRYTFVYNTLIKAYVKAKIHNPNLLRRMIVGGARPDSETYSLIKLSEQF 527

Query: 545 QS 547
           QS
Sbjct: 541 QS 527

[Close]

BLAST of CmoCh20G004390 vs. NCBI nr
Match: XP_022943946.1 (pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1033.1 bits (2670), Expect = 8.7e-298
Identity = 527/542 (97.23%), Postives = 527/542 (97.23%), Query Frame = 0


Query: 5   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL 64
           MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL
Sbjct: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL 60

Query: 65  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKA 124
           SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALE          
Sbjct: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALE---------- 120

Query: 125 PFSFAVMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 184
                VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV
Sbjct: 121 -----VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 180

Query: 185 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP 244
           IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP
Sbjct: 181 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP 240

Query: 245 LHVSTYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAY 304
           LHVSTYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAY
Sbjct: 241 LHVSTYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAY 300

Query: 305 TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 364
           TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI
Sbjct: 301 TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 360

Query: 365 GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 424
           GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF
Sbjct: 361 GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 420

Query: 425 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 484
           RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE
Sbjct: 421 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 480

Query: 485 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 544
           KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF
Sbjct: 481 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 527

Query: 545 QS 547
           QS
Sbjct: 541 QS 527

[Close]

BLAST of CmoCh20G004390 vs. NCBI nr
Match: KAG6570702.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1025.8 bits (2651), Expect = 1.4e-295
Identity = 523/542 (96.49%), Postives = 525/542 (96.86%), Query Frame = 0


Query: 5   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL 64
           MRLGA LSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQI DNSSGKVL+SELEGPKCL
Sbjct: 1   MRLGAILSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQIPDNSSGKVLESELEGPKCL 60

Query: 65  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKA 124
           SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALE          
Sbjct: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALE---------- 120

Query: 125 PFSFAVMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 184
                VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV
Sbjct: 121 -----VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 180

Query: 185 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP 244
           IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP
Sbjct: 181 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP 240

Query: 245 LHVSTYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAY 304
           LHVSTYNILMKIEANEHNIEGLMKVFGDMK+AKVEPNEVSYCIVATAHAVAKLYTVAEAY
Sbjct: 241 LHVSTYNILMKIEANEHNIEGLMKVFGDMKRAKVEPNEVSYCIVATAHAVAKLYTVAEAY 300

Query: 305 TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 364
           TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI
Sbjct: 301 TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 360

Query: 365 GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 424
           GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF
Sbjct: 361 GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 420

Query: 425 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 484
           RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE
Sbjct: 421 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 480

Query: 485 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 544
           KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF
Sbjct: 481 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 527

Query: 545 QS 547
           QS
Sbjct: 541 QS 527

[Close]

BLAST of CmoCh20G004390 vs. NCBI nr
Match: KAG7010548.1 (Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1020.4 bits (2637), Expect = 5.8e-294
Identity = 520/542 (95.94%), Postives = 524/542 (96.68%), Query Frame = 0


Query: 5   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL 64
           MRLGA LSGYRLIQAFRRTVSSTSSAV+TVP+RFNFLCTQI DNSSGKVL+SELEGPKCL
Sbjct: 1   MRLGAILSGYRLIQAFRRTVSSTSSAVDTVPYRFNFLCTQIPDNSSGKVLESELEGPKCL 60

Query: 65  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKA 124
           SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALE          
Sbjct: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALE---------- 120

Query: 125 PFSFAVMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 184
                VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV
Sbjct: 121 -----VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 180

Query: 185 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP 244
           IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP
Sbjct: 181 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP 240

Query: 245 LHVSTYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAY 304
           LHVSTYNILMKIEANEHNIEGLMKVFGDMK+AKVEPNEVSYCIVATAHAVAKLYTVAEAY
Sbjct: 241 LHVSTYNILMKIEANEHNIEGLMKVFGDMKRAKVEPNEVSYCIVATAHAVAKLYTVAEAY 300

Query: 305 TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 364
           TEAIEKS AGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI
Sbjct: 301 TEAIEKSIAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 360

Query: 365 GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 424
           GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF
Sbjct: 361 GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 420

Query: 425 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 484
           RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE
Sbjct: 421 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 480

Query: 485 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 544
           KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF
Sbjct: 481 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 527

Query: 545 QS 547
           QS
Sbjct: 541 QS 527

[Close]

BLAST of CmoCh20G004390 vs. NCBI nr
Match: XP_023511959.1 (pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1018.1 bits (2631), Expect = 2.9e-293
Identity = 519/542 (95.76%), Postives = 522/542 (96.31%), Query Frame = 0


Query: 5   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL 64
           MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVL+SELEG KCL
Sbjct: 1   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLESELEGSKCL 60

Query: 65  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKA 124
           SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALE          
Sbjct: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALE---------- 120

Query: 125 PFSFAVMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 184
                VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV
Sbjct: 121 -----VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 180

Query: 185 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP 244
           IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP
Sbjct: 181 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP 240

Query: 245 LHVSTYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAY 304
           LHVSTYNILMKIEANEHNIEGLMKVFGDMK+A VEPNEVSYCIVATAHAVAKLYTVAEAY
Sbjct: 241 LHVSTYNILMKIEANEHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAY 300

Query: 305 TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 364
           TEAIEKS AGSNWSTYDVLIILYGYLKKEKELERTWGT+QGLPHIPSKSFILAIEAFGKI
Sbjct: 301 TEAIEKSIAGSNWSTYDVLIILYGYLKKEKELERTWGTVQGLPHIPSKSFILAIEAFGKI 360

Query: 365 GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 424
           GLLSRAEELWLEMKT RGIKATDQLNSILSVYCKHGLIKKATE FREIEANGCEPNAITF
Sbjct: 361 GLLSRAEELWLEMKTKRGIKATDQLNSILSVYCKHGLIKKATEFFREIEANGCEPNAITF 420

Query: 425 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 484
           RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE
Sbjct: 421 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 480

Query: 485 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 544
           KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF
Sbjct: 481 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 527

Query: 545 QS 547
           QS
Sbjct: 541 QS 527

[Close]

BLAST of CmoCh20G004390 vs. NCBI nr
Match: XP_022986847.1 (pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1016.1 bits (2626), Expect = 1.1e-292
Identity = 517/542 (95.39%), Postives = 521/542 (96.13%), Query Frame = 0


Query: 5   MRLGAFLSGYRLIQAFRRTVSSTSSAVNTVPFRFNFLCTQISDNSSGKVLDSELEGPKCL 64
           MRLGA LSGYRLIQAFRRTVSSTSS VNT+PFRFNFLCTQI DNSSGKVL+SELEGPKCL
Sbjct: 1   MRLGAILSGYRLIQAFRRTVSSTSSVVNTIPFRFNFLCTQIPDNSSGKVLESELEGPKCL 60

Query: 65  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKA 124
           SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALE          
Sbjct: 61  SLRIERIPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALE---------- 120

Query: 125 PFSFAVMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 184
                VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV
Sbjct: 121 -----VMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLV 180

Query: 185 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVP 244
           IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRK+IPKILTQMKADKVP
Sbjct: 181 IACLDKGAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKIIPKILTQMKADKVP 240

Query: 245 LHVSTYNILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAY 304
           LHVSTYNILMKIEANEHNIEGLMKVFGDMK+A VEPNEVSYCIVATAHAVAKLYTVAEAY
Sbjct: 241 LHVSTYNILMKIEANEHNIEGLMKVFGDMKRANVEPNEVSYCIVATAHAVAKLYTVAEAY 300

Query: 305 TEAIEKSFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 364
           TEAIEKS AGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI
Sbjct: 301 TEAIEKSIAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKI 360

Query: 365 GLLSRAEELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 424
           GLLSRAEELWLEMKT RGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF
Sbjct: 361 GLLSRAEELWLEMKTKRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITF 420

Query: 425 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 484
           RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE
Sbjct: 421 RNLALGCLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTE 480

Query: 485 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 544
           KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF
Sbjct: 481 KLFEELKEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQF 527

Query: 545 QS 547
           QS
Sbjct: 541 QS 527

[Close]

BLAST of CmoCh20G004390 vs. TAIR 10
Match: AT1G07590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 674.5 bits (1739), Expect = 7.3e-194
Identity = 335/535 (62.62%), Postives = 419/535 (78.32%), Query Frame = 0


Query: 17  IQAFRRTVSSTSSAVNTVPFR-FNFLCTQISDNSSGKVL-----DSELEGPKCLSLRIER 76
           +QA RRT    S A+N   F+  +FL T IS   S +       + E E  KCLSLRIE+
Sbjct: 15  VQAIRRTTCVASPALNQTNFQASSFLTTLISSKKSPEETCIGSEEEEEEPNKCLSLRIEK 74

Query: 77  IPKGETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKAPFSFAV 136
           +PKG TVG A +SWMGDGFP+H GD++HAINRLRKL RNK ALE               +
Sbjct: 75  LPKGVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALE---------------L 134

Query: 137 MEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDK 196
           MEW+IRE+PYR+ EL+YSYLLEFT+K HG+SQGEKLF+ +P EFQ ELL+NNLVIACLD+
Sbjct: 135 MEWIIRERPYRLGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQ 194

Query: 197 GAIRLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTY 256
           G IRL+L YM+KMRE+ +R SHLV+NRLII +S+P RRKLI K L  MKADK   HVSTY
Sbjct: 195 GVIRLALEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTY 254

Query: 257 NILMKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEK 316
           +ILMK+EANEHNI+G++K F  MK+A VEPNEVSYCI+A AHAVA+LYTVAEAYTE IEK
Sbjct: 255 HILMKLEANEHNIDGVLKAFDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEK 314

Query: 317 SFAGSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLLSRA 376
           S  G NWST D+L+ILYG L KEKEL RTW  I+G  H+ SKS++LA EAF ++G L RA
Sbjct: 315 SITGDNWSTLDILMILYGRLGKEKELARTWNVIRGFHHVRSKSYLLATEAFARVGNLDRA 374

Query: 377 EELWLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALG 436
           EELWLEMK ++G+K T+Q NS+LSVYCK GLI+KA  +FRE+  NG +PN+IT+R+LALG
Sbjct: 375 EELWLEMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALG 434

Query: 437 CLKAGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEEL 496
           C KA L++E +K +++G N++ +S+ I  STPWLETTLS+IE  AE+GDVEN+EKLFEE+
Sbjct: 435 CAKAKLMKEALKNIEMGLNLK-TSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEV 494

Query: 497 KEAKYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQ 546
           K AKY RY FVYN L +AYVKAK+++PNL +RM++GGARPD+E+YSL+KL EQ++
Sbjct: 495 KNAKYNRYAFVYNALFKAYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLVEQYK 533

[Close]

BLAST of CmoCh20G004390 vs. TAIR 10
Match: AT1G80270.1 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 176.0 bits (445), Expect = 8.1e-44
Identity = 115/440 (26.14%), Postives = 223/440 (50.68%), Query Frame = 0


Query: 74  GETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKAPFSFAVMEW 133
           G ++G A   W+ +G  I R +I  A+ +LR+      AL+++               EW
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMS---------------EW 200

Query: 134 VIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAI 193
           +   K   + E DY+  L+ T+K  G+ +GE     IP  F+GE+L+  L+  C+  G +
Sbjct: 201 LEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNV 260

Query: 194 RLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNIL 253
           + S     KM+++   +S    +++++LH    R+K I  +L  M+ + +   + TY IL
Sbjct: 261 KKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRKK-IADVLLLMEKENIKPSLLTYKIL 320

Query: 254 MKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSFA 313
           + ++   ++I G+ ++   MK   VE +  +  + A  ++ A L   AE   + +E    
Sbjct: 321 IDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESL 380

Query: 314 GSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLLSRAEEL 373
            +N   +  L+ +Y  L +E E++R W   +  P+   +  + AI+AFGK+  +  AE +
Sbjct: 381 EANRRAFKDLLSIYASLGREDEVKRIWKICESKPYF--EESLAAIQAFGKLNKVQEAEAI 440

Query: 374 WLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALGCLK 433
           + ++  +    ++   + +L VY  H ++ K  ++ + +  +GC   A T+  L    ++
Sbjct: 441 FEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVE 500

Query: 434 AGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEA 493
           AG VE+    LD  S  + S  ++ M+     + + +++  ++RGDV NTEK+F +++EA
Sbjct: 501 AGEVEKADSLLDKAS--KQSHTKLMMN-----SFMYIMDEYSKRGDVHNTEKIFLKMREA 555

Query: 494 KYTRYTFVYNTLLRAYVKAK 514
            YT     +  L++AY+ AK
Sbjct: 561 GYTSRLRQFQALMQAYINAK 555

[Close]

BLAST of CmoCh20G004390 vs. TAIR 10
Match: AT1G80270.2 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 176.0 bits (445), Expect = 8.1e-44
Identity = 115/440 (26.14%), Postives = 223/440 (50.68%), Query Frame = 0


Query: 74  GETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKAPFSFAVMEW 133
           G ++G A   W+ +G  I R +I  A+ +LR+      AL+++               EW
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMS---------------EW 200

Query: 134 VIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAI 193
           +   K   + E DY+  L+ T+K  G+ +GE     IP  F+GE+L+  L+  C+  G +
Sbjct: 201 LEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNV 260

Query: 194 RLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNIL 253
           + S     KM+++   +S    +++++LH    R+K I  +L  M+ + +   + TY IL
Sbjct: 261 KKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRKK-IADVLLLMEKENIKPSLLTYKIL 320

Query: 254 MKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSFA 313
           + ++   ++I G+ ++   MK   VE +  +  + A  ++ A L   AE   + +E    
Sbjct: 321 IDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESL 380

Query: 314 GSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLLSRAEEL 373
            +N   +  L+ +Y  L +E E++R W   +  P+   +  + AI+AFGK+  +  AE +
Sbjct: 381 EANRRAFKDLLSIYASLGREDEVKRIWKICESKPYF--EESLAAIQAFGKLNKVQEAEAI 440

Query: 374 WLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALGCLK 433
           + ++  +    ++   + +L VY  H ++ K  ++ + +  +GC   A T+  L    ++
Sbjct: 441 FEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVE 500

Query: 434 AGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEA 493
           AG VE+    LD  S  + S  ++ M+     + + +++  ++RGDV NTEK+F +++EA
Sbjct: 501 AGEVEKADSLLDKAS--KQSHTKLMMN-----SFMYIMDEYSKRGDVHNTEKIFLKMREA 555

Query: 494 KYTRYTFVYNTLLRAYVKAK 514
            YT     +  L++AY+ AK
Sbjct: 561 GYTSRLRQFQALMQAYINAK 555

[Close]

BLAST of CmoCh20G004390 vs. TAIR 10
Match: AT1G80270.3 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 176.0 bits (445), Expect = 8.1e-44
Identity = 115/440 (26.14%), Postives = 223/440 (50.68%), Query Frame = 0


Query: 74  GETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKAPFSFAVMEW 133
           G ++G A   W+ +G  I R +I  A+ +LR+      AL+++               EW
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMS---------------EW 200

Query: 134 VIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAI 193
           +   K   + E DY+  L+ T+K  G+ +GE     IP  F+GE+L+  L+  C+  G +
Sbjct: 201 LEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNV 260

Query: 194 RLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNIL 253
           + S     KM+++   +S    +++++LH    R+K I  +L  M+ + +   + TY IL
Sbjct: 261 KKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRKK-IADVLLLMEKENIKPSLLTYKIL 320

Query: 254 MKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSFA 313
           + ++   ++I G+ ++   MK   VE +  +  + A  ++ A L   AE   + +E    
Sbjct: 321 IDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESL 380

Query: 314 GSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLLSRAEEL 373
            +N   +  L+ +Y  L +E E++R W   +  P+   +  + AI+AFGK+  +  AE +
Sbjct: 381 EANRRAFKDLLSIYASLGREDEVKRIWKICESKPYF--EESLAAIQAFGKLNKVQEAEAI 440

Query: 374 WLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALGCLK 433
           + ++  +    ++   + +L VY  H ++ K  ++ + +  +GC   A T+  L    ++
Sbjct: 441 FEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVE 500

Query: 434 AGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEA 493
           AG VE+    LD  S  + S  ++ M+     + + +++  ++RGDV NTEK+F +++EA
Sbjct: 501 AGEVEKADSLLDKAS--KQSHTKLMMN-----SFMYIMDEYSKRGDVHNTEKIFLKMREA 555

Query: 494 KYTRYTFVYNTLLRAYVKAK 514
            YT     +  L++AY+ AK
Sbjct: 561 GYTSRLRQFQALMQAYINAK 555

[Close]

BLAST of CmoCh20G004390 vs. TAIR 10
Match: AT1G15480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 169.5 bits (428), Expect = 7.6e-42
Identity = 118/472 (25.00%), Postives = 227/472 (48.09%), Query Frame = 0


Query: 74  GETVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKHALEVATSISLFKAPFSFAVMEW 133
           G +VG A   W+  G   +R +   A+ +LRK      AL++                EW
Sbjct: 139 GLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMT---------------EW 198

Query: 134 VIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAI 193
           +   K + + E DY+  L+   K  G  +GE     IP  F+GEL++  L+   +    +
Sbjct: 199 LDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNV 258

Query: 194 RLSLAYMRKMREVSHRISHLVFNRLIILHSSPRRRKLIPKILTQMKADKVPLHVSTYNIL 253
           R + A   KM+++   +S    N+++IL+    ++K I  +L  ++ + +  +++TY IL
Sbjct: 259 RTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKKK-IADVLLLLEKENLKPNLNTYKIL 318

Query: 254 MKIEANEHNIEGLMKVFGDMKQAKVEPNEVSYCIVATAHAVAKLYTVAEAYTEAIEKSFA 313
           +  + + ++I G+ ++   MK   VE +  +  ++A  +A A L   AE   + +E    
Sbjct: 319 IDTKGSSNDITGMEQIVETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESL 378

Query: 314 GSNWSTYDVLIILYGYLKKEKELERTWGTIQGLPHIPSKSFILAIEAFGKIGLLSRAEEL 373
             N      L+ +YGYL++E E+ R W   +  P       + AI AFGKI  +  AE +
Sbjct: 379 EENRHMCKDLLSVYGYLQREDEVRRVWKICEENPRY--NEVLAAILAFGKIDKVKDAEAV 438

Query: 374 WLEMKTIRGIKATDQLNSILSVYCKHGLIKKATEIFREIEANGCEPNAITFRNLALGCLK 433
           + ++  +    +++  + +L VY  H ++ +  ++ +++  +GC   A+T+  +    ++
Sbjct: 439 FEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVE 498

Query: 434 AGLVEEGMKTLDLGSNIRSSSRRIRMSTPWLETTLSMIEILAERGDVENTEKLFEELKEA 493
           AG VE+   +L       S + + +   P + + + ++     RGDV NTEK+F+ +K+A
Sbjct: 499 AGEVEKAESSL-------SKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQA 558

Query: 494 KYTRYTFVYNTLLRAYVKAKIHNPNLLRRMIIGGARPDSETYSLIKLTEQFQ 546
            Y    + Y TL++AYV AK     +  RM      P+    + +   + F+
Sbjct: 559 GYQSRFWAYQTLIQAYVNAKAPAYGMKERMKADNIFPNKRLAAQLAKADPFK 585

The following BLAST results are available for this feature:

BLAST of CmoCh20G004390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940Q2	1.0e-192	62.62	Pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Arabidop...	[more]
Q9C977	1.1e-42	26.14	Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidop...	[more]
Q9XI21	1.1e-40	25.00	Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidop...	[more]
Q9SY07	4.8e-33	24.52	Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop...	[more]
Q9LRP6	4.7e-28	23.22	Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidop...	[more]

BLAST of CmoCh20G004390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FT35	4.2e-298	97.23	pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Cucurbit...	[more]
A0A6J1J8P8	5.3e-293	95.39	pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Cucurbit...	[more]
A0A5A7V3P3	9.1e-269	86.90	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CKS5	9.1e-269	86.90	pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Cucumis ...	[more]
A0A0A0KFE9	1.6e-268	86.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190380 PE=4 SV=1	[more]

BLAST of CmoCh20G004390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943946.1	8.7e-298	97.23	pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Cucurbita ...	[more]
KAG6570702.1	1.4e-295	96.49	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG7010548.1	5.8e-294	95.94	Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosper...	[more]
XP_023511959.1	2.9e-293	95.76	pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Cucurbita ...	[more]
XP_022986847.1	1.1e-292	95.39	pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Cucurbita ...	[more]

BLAST of CmoCh20G004390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07590.1	7.3e-194	62.62	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80270.1	8.1e-44	26.14	PENTATRICOPEPTIDE REPEAT 596	[more]
AT1G80270.2	8.1e-44	26.14	PENTATRICOPEPTIDE REPEAT 596	[more]
AT1G80270.3	8.1e-44	26.14	PENTATRICOPEPTIDE REPEAT 596	[more]
AT1G15480.1	7.6e-42	25.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 351..458 e-value: 6.7E-16 score: 60.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 459..544 e-value: 1.6E-7 score: 32.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 176..348 e-value: 1.1E-15 score: 59.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 249..282 e-value: 0.0032 score: 15.5 coord: 390..421 e-value: 1.4E-7 score: 29.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 390..431 e-value: 3.0E-8 score: 33.8 coord: 247..291 e-value: 2.4E-8 score: 34.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 469..493 e-value: 0.67 score: 10.3 coord: 358..379 e-value: 0.16 score: 12.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 246..280 score: 8.670445
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 385..419 score: 10.720209
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 16..543
None	No IPR available	PANTHER	PTHR45717:SF11	BNAC08G45480D PROTEIN	coord: 16..543

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G004390.1	CmoCh20G004390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding