CmoCh19G011330 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAAAGACTGCGACTAACACAAGAGCATATTGCCACAAAGACTGCGACTAACTAGAGCATATTGTGTTAATCCGTAAATTTTGGAGTGGTCTGCAGCTTTGCCACGTCATTAACCCAACCTTTTAAAATACTGGCCAACCAGTGGGACTCCGCCGTGAAACTGAGGGAGGGAGATTACAAGAACTTGCATCTCTGCTCTCACGCTCACTGAGCACCTTCCTTGTTTGACAGCAACCGAGATGGCATCCCCCTTCCGTTCCGACATATTGAAAGGGAAGGTGGCTTTGATTACTGGCGGCGGCTCTGGAATCGGCTACGAGATCGCCGCCCAATTTGGTCAACATGGAGCTTCCATTGCCATCATGGGTCGAAGGAAGCAAGTCCTCGATTCCGCCGTCTCCGCTCTCCGATCTCTTGGAATTTCAGTATTTCTCTTTCACTCTTTCTTCTTCCCTTTTTCATCATGCTTTTTTCTCCCTCTGCTTACTTGTTGGATGCGCTTTAACTTCTCCGTGATCTTACACGCCTGTCCTCCCTCTCCTTACATTTTCAATTCTTGTATTTGATAATCAAGGTGAATGTGAAAGCTTATTTGTAAACATTTGCATCTACGGTTTCTTTTTATTGTTTCGGAGTTATTAATGTTCTTATAAAGATGGGGCTTAGCTGGAGTCGTGAAAAAGGTTTTCTTCTAAGTTTCTTTGCTTTGTCATGGCAAGTACAATTATAAACTTATCAAAGCTAAAGCAGCCTATCTTACTTGCCGCTGTTAATTTAGATTGTAGTACACTGTACGATTAAAAATGAGATTACTTACGTTTTTTTTTAAGATAAACTGAAATGACAGTGCTCTAATTAACAAAGTTTTGCGGGGTTTTTTTTGGTTACATAATTTGATTTTCTGGACCTTCCTTTTTCTTTAAAAACATCTATCAATGACTTTGGATATTGCTAAAGTAGAGGCTGGAAGTAATCAGGGTGATGTTAGTTACATAAATTTGCATCTAATCAATTTAAGAGATAATAGGAAGACGAACTTGAGGAATTCGAGATATGTATAATTATTGTTCTAAAAGACTTCGATTGAGTCATGTGCTCTGCACTGTGTGCTTTTACAGATGACTCTGAAAAATACAACTAACGAACATGAAATTTATGAGTTTCCAAAAGCATATAAAATGCTGCATATGGAAAATTCAAAAGCAGTTGCATAGGTTTGTAATATGTGTATACCACACGGATGTGTAGATGGACTCACTAATATGTATAATCACCCATGTTATCCTCTGAGAACTGAACTTGATTCTGAAACCTGTTGTTTGTATACTGGCCATTGCAGGCATTTGGATTTGAAGGTGATGTTCGTAAACAAGAAGACGCAAGTAGAGTAGTGGAGTCTACTGTCAACAATCTTGGTAGTCTGGACATTCTTGTGAATGCAGCAGCTGGGAACTTTCTGGTATCAGCCGAAGATTTGTCTCCCAATGGATTTCGAACAGGTTCTTTTCGCATGCAATACCTACTGTCAATAATCTTGGTAGCCTGGCTTTTACTTGATATTAGTCCATAGGGATTAACGATCATGCAAAAAAGATTTGTCCGTTGGAAGTATTTTGTATTTTGTAGTTTTGGGTGCTCCAGAGATGTTATTTATCTTCATTTAATTGATCTTGGAACTACACTAATTTGAACGCATATTCACTCTGGAAATTAATGAAAATTGAATTCCATTGGTCATAACTCATATAGTTCTTATTCAACTCAAAGGAGTACGTGAAAATTTTCTCTGGCATGTTAGGTTGTTTGGTTGTATGTTGCGATATTTTGTAGTTTTGGGTGCTCCAGAGATGTTTTTTTTTTTTTTTTTTGTTTGTTTATTTGTTTTGTTATGTTAAATTACAAGTTTAGTCTCAAAACTTCCAAATTTGTGTCTATCTAGTCCTTAAACTTTTAAGAGTGTCTAATAGGTTCTTAAACTTTCAATTTTGATTCAATAGATACTTGAGCGTTGAATGTAATATGTCACTATCCTATTCGATGTGGTTTGAAATTTATGAACCTACAATTACAAAATCGAAAGTTAAGAAATTTATTAAACTTTTTAAAGTTGAGACCTTATAGACACGATTTTAAAAAAATCAGGAACCTACTAGACACTTTTTAAAGTTCAGTAGACTTAATTCTTAAATTTTCACCATTTTTTTTATTGCATGTGTTTGTCTTTCAAAGTTAATCTAATTATTTTAGATAGAGACGTGTTCATTTACGTAAAGATGTTTGATGAATATGTAAGATTGAAACCAGAAAGGAGTTATTACATAATACGAAATGGGCGCTTATTGCCGGAACATGCTTTTCATGAAGTGCCACATATTCTATTTACTTACACTTGATTTTAACAATCCCCTGCAGTTATGGATATTGATTCAGTTGGCACATTCACAATGTGCCATGAATCACTTAAATATCTCAAGAAAGGAGGACCTGGAAGAAATTCACTTACCGGTGGAACAATTATTAATATTAGTGCTACTTTGCATTACACAGCTGTCTGGTATCAAATTCATGTATCTGCAGCCAAGGTTAGTTGTGTTCATGTCTGAAGGTTATAATCTCTCTTTTTCGGTTGGAAGAACTTTCGTCAAATTTTCTTTCTAACAGGCAGCTGTAGATGCTATTACAAGAAACTTAGCTCTGGAGTGGGGCGCTGATTATGATATTAGGGTCAACGGCATTGCACCAGGACCCATCCAGGGTACTCCTGGTTTGAGTAAACTCGCACCTGAAGAGATAAGCAGTAAAGTAAGAGCTGATATGCCTTTGTACAGAGTAGGAGAAAAATGGGATATTGCTATGGCTGCTCTCTACCTTGCCTCGGATGCAGGTGCGCCCCTTGTTAATCATGCAACATTTCTTAATTTTCTACTTTTTGATGTTAATCTGAATGTTTCAAAACTTTTTTTTGTTGGGAAAAAAAGTCATGCTTTGAGAATGTTTTAAATGCTTAGTCTTTACATCTTGGCGTATGATCCGACATTTGAGGCCGTAATGCATATGTTTTTATCATTTTTGCATTAGAGACTTACCCAAACATGTTGCATTTGAAAAATGAGAAGTAGAAGCTCTCCATGTTTTCGGTTTAGGTTGATCTTGTTGACAACTTCCAAAAGCCTTGTTTGGTACTCGGAACACTTGAAAAAGAACTGTTGAATGATTTCTATCAATATTGACTTTCAAAATTGTTTTCAGATACTTTTTTATTTATTTAAACCTTTTATAGAAATGAATCTATCATATACAATTTTAAAAATTGAAAAGATCATTAGGTCATCGATGGAAAATAGAATGTTAAATTCCTTAACAGCATGGAAAGTATAAAAGGGTAAAATGTATTTGTTTAAGAATCTCAAATTTTAGGAGTCAATTATTTTGAAGTGCACAAGATTAATCTTTAGTTGATTAAATATCGTACATTATGTATATTTTGAAGGTAAATACGTGAATGGAACAACTATCATTGCCGATGGAGGGATGTGGTTGAGCACGCCTCGTCGCCTGCCCAAGGAGGCTGTTAAGCAGTTGTCGCGAGTGGTGGAAAAGAGGTCCAGAAATTCACCTGTTGGTGTTCCAAAGAGTAAGCTGTGATGGCGAACCTCACCGATAAATTAAGATAATCTTTATATACAGTACTTGTATGCCTTTGCTAGACATTATTCAAGGAATTCAACTTTCTGTGCACCAGAAACTTGAATGTCACTGGTAGCGAGAATTTTGAGTCCACACATTTGTGACGCTTGGACACTTATGCTAGTGAGAAAAGGTCATTTAGATTTCAAGAATAAATTAGCTGTTTATCTTTGTG ATAAAGACTGCGACTAACACAAGAGCATATTGCCACAAAGACTGCGACTAACTAGAGCATATTGTGTTAATCCGTAAATTTTGGAGTGGTCTGCAGCTTTGCCACGTCATTAACCCAACCTTTTAAAATACTGGCCAACCAGTGGGACTCCGCCGTGAAACTGAGGGAGGGAGATTACAAGAACTTGCATCTCTGCTCTCACGCTCACTGAGCACCTTCCTTGTTTGACAGCAACCGAGATGGCATCCCCCTTCCGTTCCGACATATTGAAAGGGAAGGTGGCTTTGATTACTGGCGGCGGCTCTGGAATCGGCTACGAGATCGCCGCCCAATTTGGTCAACATGGAGCTTCCATTGCCATCATGGGTCGAAGGAAGCAAGTCCTCGATTCCGCCGTCTCCGCTCTCCGATCTCTTGGAATTTCAGCATTTGGATTTGAAGGTGATGTTCGTAAACAAGAAGACGCAAGTAGAGTAGTGGAGTCTACTGTCAACAATCTTGGTAGTCTGGACATTCTTGTGAATGCAGCAGCTGGGAACTTTCTGGTATCAGCCGAAGATTTGTCTCCCAATGGATTTCGAACAGTTATGGATATTGATTCAGTTGGCACATTCACAATGTGCCATGAATCACTTAAATATCTCAAGAAAGGAGGACCTGGAAGAAATTCACTTACCGGTGGAACAATTATTAATATTAGTGCTACTTTGCATTACACAGCTGTCTGGTATCAAATTCATGTATCTGCAGCCAAGGCAGCTGTAGATGCTATTACAAGAAACTTAGCTCTGGAGTGGGGCGCTGATTATGATATTAGGGTCAACGGCATTGCACCAGGACCCATCCAGGGTACTCCTGGTTTGAGTAAACTCGCACCTGAAGAGATAAGCAGTAAAGTAAGAGCTGATATGCCTTTGTACAGAGTAGGAGAAAAATGGGATATTGCTATGGCTGCTCTCTACCTTGCCTCGGATGCAGGTAAATACGTGAATGGAACAACTATCATTGCCGATGGAGGGATGTGGTTGAGCACGCCTCGTCGCCTGCCCAAGGAGGCTGTTAAGCAGTTGTCGCGAGTGGTGGAAAAGAGGTCCAGAAATTCACCTGTTGGTGTTCCAAAGAGTAAGCTGTGATGGCGAACCTCACCGATAAATTAAGATAATCTTTATATACAGTACTTGTATGCCTTTGCTAGACATTATTCAAGGAATTCAACTTTCTGTGCACCAGAAACTTGAATGTCACTGGTAGCGAGAATTTTGAGTCCACACATTTGTGACGCTTGGACACTTATGCTAGTGAGAAAAGGTCATTTAGATTTCAAGAATAAATTAGCTGTTTATCTTTGTG ATGGCATCCCCCTTCCGTTCCGACATATTGAAAGGGAAGGTGGCTTTGATTACTGGCGGCGGCTCTGGAATCGGCTACGAGATCGCCGCCCAATTTGGTCAACATGGAGCTTCCATTGCCATCATGGGTCGAAGGAAGCAAGTCCTCGATTCCGCCGTCTCCGCTCTCCGATCTCTTGGAATTTCAGCATTTGGATTTGAAGGTGATGTTCGTAAACAAGAAGACGCAAGTAGAGTAGTGGAGTCTACTGTCAACAATCTTGGTAGTCTGGACATTCTTGTGAATGCAGCAGCTGGGAACTTTCTGGTATCAGCCGAAGATTTGTCTCCCAATGGATTTCGAACAGTTATGGATATTGATTCAGTTGGCACATTCACAATGTGCCATGAATCACTTAAATATCTCAAGAAAGGAGGACCTGGAAGAAATTCACTTACCGGTGGAACAATTATTAATATTAGTGCTACTTTGCATTACACAGCTGTCTGGTATCAAATTCATGTATCTGCAGCCAAGGCAGCTGTAGATGCTATTACAAGAAACTTAGCTCTGGAGTGGGGCGCTGATTATGATATTAGGGTCAACGGCATTGCACCAGGACCCATCCAGGGTACTCCTGGTTTGAGTAAACTCGCACCTGAAGAGATAAGCAGTAAAGTAAGAGCTGATATGCCTTTGTACAGAGTAGGAGAAAAATGGGATATTGCTATGGCTGCTCTCTACCTTGCCTCGGATGCAGGTAAATACGTGAATGGAACAACTATCATTGCCGATGGAGGGATGTGGTTGAGCACGCCTCGTCGCCTGCCCAAGGAGGCTGTTAAGCAGTTGTCGCGAGTGGTGGAAAAGAGGTCCAGAAATTCACCTGTTGGTGTTCCAAAGAGTAAGCTGTGA MASPFRSDILKGKVALITGGGSGIGYEIAAQFGQHGASIAIMGRRKQVLDSAVSALRSLGISAFGFEGDVRKQEDASRVVESTVNNLGSLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHESLKYLKKGGPGRNSLTGGTIINISATLHYTAVWYQIHVSAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIQGTPGLSKLAPEEISSKVRADMPLYRVGEKWDIAMAALYLASDAGKYVNGTTIIADGGMWLSTPRRLPKEAVKQLSRVVEKRSRNSPVGVPKSKL Homology
BLAST of CmoCh19G011330 vs. ExPASy Swiss-Prot
Match: Q9LTV6 (Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] OS=Arabidopsis thaliana OX=3702 GN=At3g12800 PE=2 SV=1) HSP 1 Score: 476.1 bits (1224), Expect = 2.9e-133 Identity = 235/298 (78.86%), Postives = 263/298 (88.26%), Query Frame = 0
BLAST of CmoCh19G011330 vs. ExPASy Swiss-Prot
Match: Q9WV68 (Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] OS=Mus musculus OX=10090 GN=Decr2 PE=1 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.4e-50 Identity = 118/275 (42.91%), Postives = 159/275 (57.82%), Query Frame = 0
BLAST of CmoCh19G011330 vs. ExPASy Swiss-Prot
Match: Q9NUI1 (Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] OS=Homo sapiens OX=9606 GN=DECR2 PE=1 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 4.0e-50 Identity = 119/265 (44.91%), Postives = 154/265 (58.11%), Query Frame = 0
BLAST of CmoCh19G011330 vs. ExPASy Swiss-Prot
Match: Q5RBV3 (Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] OS=Pongo abelii OX=9601 GN=DECR2 PE=2 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 6.9e-50 Identity = 119/265 (44.91%), Postives = 154/265 (58.11%), Query Frame = 0
BLAST of CmoCh19G011330 vs. ExPASy Swiss-Prot
Match: Q9Z2M4 (Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] OS=Rattus norvegicus OX=10116 GN=Decr2 PE=1 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 2.6e-49 Identity = 113/264 (42.80%), Postives = 154/264 (58.33%), Query Frame = 0
BLAST of CmoCh19G011330 vs. ExPASy TrEMBL
Match: A0A6J1GL22 (peroxisomal 2,4-dienoyl-CoA reductase OS=Cucurbita moschata OX=3662 GN=LOC111455238 PE=4 SV=1) HSP 1 Score: 583.9 bits (1504), Expect = 3.7e-163 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
BLAST of CmoCh19G011330 vs. ExPASy TrEMBL
Match: A0A6J1HZV1 (peroxisomal 2,4-dienoyl-CoA reductase OS=Cucurbita maxima OX=3661 GN=LOC111468426 PE=4 SV=1) HSP 1 Score: 581.6 bits (1498), Expect = 1.8e-162 Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0
BLAST of CmoCh19G011330 vs. ExPASy TrEMBL
Match: A0A1S3BHI1 (peroxisomal 2,4-dienoyl-CoA reductase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489636 PE=4 SV=1) HSP 1 Score: 553.5 bits (1425), Expect = 5.3e-154 Identity = 277/297 (93.27%), Postives = 288/297 (96.97%), Query Frame = 0
BLAST of CmoCh19G011330 vs. ExPASy TrEMBL
Match: A0A6J1D2B0 (peroxisomal 2,4-dienoyl-CoA reductase OS=Momordica charantia OX=3673 GN=LOC111016706 PE=4 SV=1) HSP 1 Score: 550.1 bits (1416), Expect = 5.9e-153 Identity = 274/297 (92.26%), Postives = 289/297 (97.31%), Query Frame = 0
BLAST of CmoCh19G011330 vs. ExPASy TrEMBL
Match: A0A067F2H7 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g022335mg PE=4 SV=1) HSP 1 Score: 501.1 bits (1289), Expect = 3.1e-138 Identity = 245/297 (82.49%), Postives = 272/297 (91.58%), Query Frame = 0
BLAST of CmoCh19G011330 vs. NCBI nr
Match: XP_022952598.1 (peroxisomal 2,4-dienoyl-CoA reductase [Cucurbita moschata] >XP_023511585.1 peroxisomal 2,4-dienoyl-CoA reductase [Cucurbita pepo subsp. pepo] >KAG6572475.1 Peroxisomal 2,4-dienoyl-CoA reductase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012069.1 Peroxisomal 2,4-dienoyl-CoA reductase, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 583.9 bits (1504), Expect = 7.6e-163 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
BLAST of CmoCh19G011330 vs. NCBI nr
Match: XP_022969410.1 (peroxisomal 2,4-dienoyl-CoA reductase [Cucurbita maxima]) HSP 1 Score: 581.6 bits (1498), Expect = 3.8e-162 Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0
BLAST of CmoCh19G011330 vs. NCBI nr
Match: XP_038888192.1 (peroxisomal 2,4-dienoyl-CoA reductase [Benincasa hispida]) HSP 1 Score: 558.1 bits (1437), Expect = 4.4e-155 Identity = 279/297 (93.94%), Postives = 290/297 (97.64%), Query Frame = 0
BLAST of CmoCh19G011330 vs. NCBI nr
Match: XP_004139835.1 (peroxisomal 2,4-dienoyl-CoA reductase [Cucumis sativus] >KAE8646106.1 hypothetical protein Csa_016671 [Cucumis sativus]) HSP 1 Score: 554.7 bits (1428), Expect = 4.9e-154 Identity = 277/297 (93.27%), Postives = 289/297 (97.31%), Query Frame = 0
BLAST of CmoCh19G011330 vs. NCBI nr
Match: XP_008447102.1 (PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase isoform X1 [Cucumis melo]) HSP 1 Score: 553.5 bits (1425), Expect = 1.1e-153 Identity = 277/297 (93.27%), Postives = 288/297 (96.97%), Query Frame = 0
BLAST of CmoCh19G011330 vs. TAIR 10
Match: AT3G12800.1 (short-chain dehydrogenase-reductase B ) HSP 1 Score: 476.1 bits (1224), Expect = 2.1e-134 Identity = 235/298 (78.86%), Postives = 263/298 (88.26%), Query Frame = 0
BLAST of CmoCh19G011330 vs. TAIR 10
Match: AT2G07640.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 221.9 bits (564), Expect = 7.0e-58 Identity = 108/147 (73.47%), Postives = 123/147 (83.67%), Query Frame = 0
BLAST of CmoCh19G011330 vs. TAIR 10
Match: AT3G05260.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 114.0 bits (284), Expect = 2.1e-25 Identity = 81/263 (30.80%), Postives = 130/263 (49.43%), Query Frame = 0
BLAST of CmoCh19G011330 vs. TAIR 10
Match: AT4G05530.1 (indole-3-butyric acid response 1 ) HSP 1 Score: 111.3 bits (277), Expect = 1.3e-24 Identity = 77/256 (30.08%), Postives = 122/256 (47.66%), Query Frame = 0
BLAST of CmoCh19G011330 vs. TAIR 10
Match: AT1G54870.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 110.2 bits (274), Expect = 3.0e-24 Identity = 81/263 (30.80%), Postives = 131/263 (49.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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