CmoCh19G009000 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G009000
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Calcium-binding EF-hand family protein
Location	Cmo_Chr19: 8490185 .. 8492893 (+)
RNA-Seq Expression	CmoCh19G009000
Synteny	CmoCh19G009000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGTAGAAATCTTGGACAGTGCTACGATCGTGAGCTTCGTGGAAGACGAAGAGGCATTCAGAGCGACAATTACAGAGCATTTCAGGGAGCTTGACATGGACAGAGATGGGGTTCTTTCGTACGGAGAGATGCTGAAGGAGTTGCAGAGTCTTAGAGTGTTGGAGACCCATTTTGGAGTGGATGTGAAACCCGACCCGGAAGAGCTTTCCTCTGTTTATGCATCGTTGTTCTCGCAGTTTGATCGGGACTGCAATGGGAAAGTTGATCTGGGTGAGTTCATGGCTGAAACCAGGAAGATGATGCTGGCCATGGCTAATGGTATTGGCCTTTCTCCTGTTCGAATGGTGTTGGAAGAGAATAGTTTCTTGAAGAAAGCTGTGGACAGAGAATCAACCAAACTCGCTGTTGCTTGATTGTTTCGATGGAAGGATACTCATCTCATGAGATCCTAACAAAATTTTGAGTCCGTTCATCTTGTTCCTCAGTTTTTACATTTCAATGACTAATTTGTTGAACTTCGCTTATGAGTTCTTTAATTTTACGAAACCAGAGATGTCCACATGCATAAGTGAGGAATACTATCTCCATTGGTGTGAGGCCTCTTCAAGCAAACCCGTGAAAGCTTATGCAGTGGACAATATCATATGATCGTGGAGAGTCGTTCATTTAACAACTTTGTGATAATATTTGTTAAAACTATCACACTTAAGCTGAAAAAGTTAGTTATTTATAATCATTTATATAATTAAAAGTCAAAGATCAATGGTCAAATATGATACATTCTGTAGTTGAAGACTAAATAAATATTTTCAATAATGTAACACTTATATAATCGAGAGTCAAATATGATGTAATGAAAAGACTAAATATCATCTTCTCTCTTCCAGCTTCTTATTTCGATTTTTTTTTGGCACCGCACACAAAAATAGTTAATACACATATAGTAACATTTCTAGGGTGTCATAAGACTTCAAACTTCAAATGCCACAATGTAATAAATATTTTATATAAAAATGTAGGGAGTCTCAAGTTCGCTAGAAATATTTGGAATAACGTAACCAAGTTAACTTTTAAAAGTATTTAAAAATTACAATTTCATCCTTATAATCGGGAAGGCTTATTTACAATTGGATCCTTGTAATTAGGAGGAAGACTTATTTATTAGGTTTTATTCGACCAAAATCATAAGGACTAAATTATTAATATAACCTAAAAATTTTGAAAATTACATTGAAGGAATATGCTTCACTTTTAAAAAGGGTTTTGGTGGCACAAAAATGGAATAATATCTTTATTTAACTTTTCCATTTTTAATTAGTATTTCAAAAAATGGCCATGGTAAATAATTTCCTTTCCTTTTATTTTCTAAAATACTATTTTTTAATTTTTTTTATAGTAAATAGAGAAATATGATTAATTTAAATTTAACCCTCATTTTTAAATATAATTCCTATTGAAACAATATATACTAATTTTTAAAACTTAAAAGCTAAATATTTCTACATAGTTTCAATATTTAAAAAATAAATATATTTACTAGTTATAAATAAATGAAATGTTAATTTTGTGTATCGGTTTTGATATATATAGTAAAACTTTTTTCTAGTGTATGCTAATTTTCTCGAGAATTTTTTACAATATTTTTTTTCATTTTATAATTTGTTACGACCGCAAAATTTAGGTTTTTCTCTCTATACATCTTATCTTAGTTGTAATATTCCTTTAACTCTAAGATTTTTGTCAGCAAAATACTCTAAAAAGCTTATCCTTCTAATAACTACTGAAGACTAACTTTTTAACTTTTTTACTTTTAAAGTTTTAAGAATCAAATTAGGATCGAGACGAACTAAAACATGTTTTTTTTTTTAAAAAAAAAATGTCGGGTGCGAGAAATATCTATATTAAATTTGTTAAAATTGCTTTTGTTAAGTTATAAATTCAAAATTAATTTTAATTCGGTAAAATTTATCTTATATATAATCAAATATTAGATTGATTTTAAGCATATTTCCTTTCAAACATTCTAAAGCTAATTGCATCGACTTCTCATCGTGTTGACTTTACGACCTTACTTCAGTACTTCAATTTTGTATTAAATTCGATTGGAACATACTTTTTCACGTCCGTTAAATCAAGATTTGCCGTCAGAATCTTCATCACTGGCACTTCCCACTGGTTCTGCCGGTGAGAAAAATGGGCACAGAGAGAGCACTGATGGCTCTGAGGCCTATTTATATGGAAGCTTGGCCCATCCTTCTGCTCATCAGAGACCCATATCAGAGGCAGCTGAAATGAGTGTGGAAATATTGGACAGTGAAACCATCGTCAACTTTGTTGAGGACGAGGCAGCCTTTGGTGCCTTCATTAGAGAACGCTTTGCTCACCTTGACACCAACCATGATGGCCTCCTTTCTTATAGCGAGATGCTAGAGGAGTTGCAGAGCCTGAGGGTGACACAGAACGACTTTGAAATTGACGTGAAGCTTGACCCAGATGAGGTTTCTTCTGTTTATAGTGCTCTGTTCTTGCAGTTTGATCGTGACTTGAATGGAACAGTTGATCTGGATGAGTTCAAGACTGAGACCAAAAGGATGATGCTTGGGATGGCTAATGGGATGGGGTTCTTGCCTGTTCAGATGGTGCTGGAAGAGGGCAGCTTGTTGATGAAGGCTGTTGAGCGTGAAACTGGTGTAATGGCCACTTGA

mRNA sequence

ATGAGCGTAGAAATCTTGGACAGTGCTACGATCGTGAGCTTCGTGGAAGACGAAGAGGCATTCAGAGCGACAATTACAGAGCATTTCAGGGAGCTTGACATGGACAGAGATGGGGTTCTTTCGTACGGAGAGATGCTGAAGGAGTTGCAGAGTCTTAGAGTGTTGGAGACCCATTTTGGAGTGGATGTGAAACCCGACCCGGAAGAGCTTTCCTCTGTTTATGCATCGTTGTTCTCGCAGTTTGATCGGGACTGCAATGGGAAAGTTGATCTGGGTGAGTTCATGGCTGAAACCAGGAAGATGATGCTGGCCATGGCTAATGATTTGCCGTCAGAATCTTCATCACTGGCACTTCCCACTGGTTCTGCCGGTGAGAAAAATGGGCACAGAGAGAGCACTGATGGCTCTGAGGCCTATTTATATGGAAGCTTGGCCCATCCTTCTGCTCATCAGAGACCCATATCAGAGGCAGCTGAAATGAGTGTGGAAATATTGGACAGTGAAACCATCGTCAACTTTGTTGAGGACGAGGCAGCCTTTGGTGCCTTCATTAGAGAACGCTTTGCTCACCTTGACACCAACCATGATGGCCTCCTTTCTTATAGCGAGATGCTAGAGGAGTTGCAGAGCCTGAGGGTGACACAGAACGACTTTGAAATTGACGTGAAGCTTGACCCAGATGAGGTTTCTTCTGTTTATAGTGCTCTGTTCTTGCAGTTTGATCGTGACTTGAATGGAACAGTTGATCTGGATGAGTTCAAGACTGAGACCAAAAGGATGATGCTTGGGATGGCTAATGGGATGGGGTTCTTGCCTGTTCAGATGGTGCTGGAAGAGGGCAGCTTGTTGATGAAGGCTGTTGAGCGTGAAACTGGTGTAATGGCCACTTGA

Coding sequence (CDS)

ATGAGCGTAGAAATCTTGGACAGTGCTACGATCGTGAGCTTCGTGGAAGACGAAGAGGCATTCAGAGCGACAATTACAGAGCATTTCAGGGAGCTTGACATGGACAGAGATGGGGTTCTTTCGTACGGAGAGATGCTGAAGGAGTTGCAGAGTCTTAGAGTGTTGGAGACCCATTTTGGAGTGGATGTGAAACCCGACCCGGAAGAGCTTTCCTCTGTTTATGCATCGTTGTTCTCGCAGTTTGATCGGGACTGCAATGGGAAAGTTGATCTGGGTGAGTTCATGGCTGAAACCAGGAAGATGATGCTGGCCATGGCTAATGATTTGCCGTCAGAATCTTCATCACTGGCACTTCCCACTGGTTCTGCCGGTGAGAAAAATGGGCACAGAGAGAGCACTGATGGCTCTGAGGCCTATTTATATGGAAGCTTGGCCCATCCTTCTGCTCATCAGAGACCCATATCAGAGGCAGCTGAAATGAGTGTGGAAATATTGGACAGTGAAACCATCGTCAACTTTGTTGAGGACGAGGCAGCCTTTGGTGCCTTCATTAGAGAACGCTTTGCTCACCTTGACACCAACCATGATGGCCTCCTTTCTTATAGCGAGATGCTAGAGGAGTTGCAGAGCCTGAGGGTGACACAGAACGACTTTGAAATTGACGTGAAGCTTGACCCAGATGAGGTTTCTTCTGTTTATAGTGCTCTGTTCTTGCAGTTTGATCGTGACTTGAATGGAACAGTTGATCTGGATGAGTTCAAGACTGAGACCAAAAGGATGATGCTTGGGATGGCTAATGGGATGGGGTTCTTGCCTGTTCAGATGGTGCTGGAAGAGGGCAGCTTGTTGATGAAGGCTGTTGAGCGTGAAACTGGTGTAATGGCCACTTGA

Protein sequence

MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLAMANDLPSESSSLALPTGSAGEKNGHRESTDGSEAYLYGSLAHPSAHQRPISEAAEMSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMAT

Homology

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BLAST of CmoCh19G009000 vs. ExPASy TrEMBL
Match: A5B6N0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_027019 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.2e-78
Identity = 175/300 (58.33%), Postives = 207/300 (69.00%), Query Frame = 0


Query: 1   MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFG 60
           MSVEIL+ ATI  FVEDEEAF + + + F  LD D+DGVLSY EMLKELQ LRV ET FG
Sbjct: 1   MSVEILNGATIDGFVEDEEAFNSWVHDXFAALDEDQDGVLSYEEMLKELQCLRVFETXFG 60

Query: 61  VDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLAMANDLPSESSSLALPT 120
           +DVK D +E++ VY  LFSQFDRD NG +D  EF   T++MMLA+A+ L      + L  
Sbjct: 61  IDVKTDADEVAGVYCFLFSQFDRDSNGVLDFEEFKTATKRMMLAVADGLGLLPLQMILEE 120

Query: 121 GS--------AGEKNGHRESTDGSEAYLYGSLAHPSAHQRPISEAAE--MSVEILDSETI 180
           GS           K  HR S DG    L  SL+  S     +S  AE  MSVE+LD  TI
Sbjct: 121 GSFLKKAVEWESTKLFHRHSDDGIYESLPISLSF-SWILASLSAGAEERMSVEVLDGATI 180

Query: 181 VNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVS 240
           V+FVEDE AF   I +RF++LDTNHDG LS +EML+E QSLRV +  F IDVK DPDE++
Sbjct: 181 VSFVEDEEAFNGLIHDRFSNLDTNHDGFLSXAEMLKEFQSLRVFETHFGIDVKRDPDELA 240

Query: 241 SVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEEGSLLMKAVERE 291
            VY +LF++FD D NG VDL+EFK ETKRMML MANG+GFLPVQMVLEE S L KAVERE
Sbjct: 241 HVYBSLFVKFDHDANGAVDLEEFKKETKRMMLAMANGLGFLPVQMVLEEDSFLKKAVERE 299

[Close]

BLAST of CmoCh19G009000 vs. ExPASy TrEMBL
Match: A5BTB3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_036814 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 3.6e-78
Identity = 174/300 (58.00%), Postives = 206/300 (68.67%), Query Frame = 0


Query: 1   MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFG 60
           MSVEIL+ ATI  FVEDEEAF + + + F  LD D+DGVLSY EMLKELQ LRV ET FG
Sbjct: 1   MSVEILNGATIXGFVEDEEAFNSWVHDXFAALDEDQDGVLSYEEMLKELQCLRVFETXFG 60

Query: 61  VDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLAMANDLPSESSSLALPT 120
           +DVK D +E++ VY  LFSQFD D NG +D  EF   T++MMLA+A+ L      + L  
Sbjct: 61  IDVKTDXDEVAGVYCFLFSQFDXDSNGVLDFEEFKTATKRMMLAVADGLGLLPLQMILEE 120

Query: 121 GS--------AGEKNGHRESTDGSEAYLYGSLAHPSAHQRPISEAAE--MSVEILDSETI 180
           GS           K  HR S DG    L  SL+  S     +S  AE  MSVE+LD  TI
Sbjct: 121 GSFLKKAVEWESTKLFHRHSDDGIYESLPISLSF-SWILASLSAGAEERMSVEVLDGXTI 180

Query: 181 VNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVS 240
           V+FVEDE AF   I +RF++LDTNHDG LS +EML+E QSLRV +  F IDVK DPDE++
Sbjct: 181 VSFVEDEEAFNGLIHDRFSNLDTNHDGFLSXAEMLKEFQSLRVFETHFGIDVKRDPDELA 240

Query: 241 SVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEEGSLLMKAVERE 291
            VY +LF++FD D NG VDL+EFK ETKRMML MANG+GFLPVQMVLEE S L KAVERE
Sbjct: 241 HVYDSLFVKFDHDANGAVDLEEFKKETKRMMLAMANGLGFLPVQMVLEEDSFLKKAVERE 299

[Close]

BLAST of CmoCh19G009000 vs. ExPASy TrEMBL
Match: A0A2P5XYB2 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12312 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.0e-72
Identity = 158/291 (54.30%), Postives = 182/291 (62.54%), Query Frame = 0


Query: 1   MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFG 60
           MSVE+LD ATIV+FVEDEEAF  +I E F  LD + DG+LSY E+ K+LQSLRVLETHFG
Sbjct: 1   MSVEVLDCATIVNFVEDEEAFNISIRERFAHLDTNHDGLLSYTELSKDLQSLRVLETHFG 60

Query: 61  VDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLAMANDLPSESSSLALPT 120
           +D+K DP+EL+ VY SLF QFD D NG VDL EF  ET++MMLAMAN +           
Sbjct: 61  IDIKTDPKELAHVYESLFEQFDHDSNGTVDLDEFKLETKRMMLAMANGM----------- 120

Query: 121 GSAGEKNGHRESTDGSEAYLYGSLAHPSAHQRPISEAAEMSVEILDSETIVNFVEDEAAF 180
                                                                  DE AF
Sbjct: 121 -------------------------------------------------------DEEAF 180

Query: 181 GAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQF 240
              IRERFAHLDTNHDGLLSY+E+ ++LQSLRV +  F ID+K DP E++ VY +LF QF
Sbjct: 181 NISIRERFAHLDTNHDGLLSYTELSKDLQSLRVLETHFGIDIKTDPKELAHVYKSLFEQF 225

Query: 241 DRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEEGSLLMKAVERET 292
           D D NGTVDLDEFK ETKRMML MANGMGFLPVQMVLEEGSLL  AVE E+
Sbjct: 241 DHDSNGTVDLDEFKLETKRMMLAMANGMGFLPVQMVLEEGSLLKIAVEHES 225

[Close]

BLAST of CmoCh19G009000 vs. ExPASy TrEMBL
Match: A0A6J1GKZ8 (uncharacterized protein LOC111455224 OS=Cucurbita moschata OX=3662 GN=LOC111455224 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.7e-67
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 160 MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 219
           MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE
Sbjct: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 60

Query: 220 IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 279
           IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE
Sbjct: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 120

Query: 280 GSLLMKAVERETGVMAT 297
           GSLLMKAVERETGVMAT
Sbjct: 121 GSLLMKAVERETGVMAT 137

[Close]

BLAST of CmoCh19G009000 vs. ExPASy TrEMBL
Match: A0A6J1I262 (uncharacterized protein LOC111468343 OS=Cucurbita maxima OX=3661 GN=LOC111468343 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 2.3e-64
Identity = 131/137 (95.62%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 160 MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFE 219
           MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEML ELQSLRVTQNDFE
Sbjct: 1   MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLAELQSLRVTQNDFE 60

Query: 220 IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEE 279
           IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEF+TETKRMMLGMANGMGFLPVQM+LEE
Sbjct: 61  IDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFRTETKRMMLGMANGMGFLPVQMLLEE 120

Query: 280 GSLLMKAVERETGVMAT 297
           GS LMKAVE ET VMAT
Sbjct: 121 GSFLMKAVEHETAVMAT 137

[Close]

BLAST of CmoCh19G009000 vs. NCBI nr
Match: KAE8645727.1 (hypothetical protein Csa_020381 [Cucumis sativus])

HSP 1 Score: 363.6 bits (932), Expect = 1.6e-96
Identity = 198/295 (67.12%), Postives = 217/295 (73.56%), Query Frame = 0


Query: 1   MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFG 60
           MSVEIL+SATI++FVEDEEAF   I E F  LD+DRDGVL YGEMLKELQSLRVLETHFG
Sbjct: 1   MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG 60

Query: 61  VDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLAMANDLPSESSSLALPT 120
           +D KPDP ELSSVY SLF QFDRDCNGKVDLGEFM ET+KMMLAMAN +      + L  
Sbjct: 61  IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE 120

Query: 121 GSAGEKNGHRESTDGSEAYLYGSLAHPSAHQRPISEAAEMSVEILDSETIVNFVEDEAAF 180
              G                                  +MSVEILD  TIVNFVEDEAAF
Sbjct: 121 NKLG----------------------------------KMSVEILDGTTIVNFVEDEAAF 180

Query: 181 GAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQF 240
            A+IR +FAHLDT+HDGLLSY+EMLEELQSLRV   DF  D KL PDE+SSVYS+LFLQF
Sbjct: 181 NAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVFDADFGNDEKLGPDELSSVYSSLFLQF 240

Query: 241 DRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMA 296
           DRD +G VDLD +KTE KRMML MANG+GFLPVQMVLEEGS LMKAVERET +MA
Sbjct: 241 DRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMA 261

[Close]

BLAST of CmoCh19G009000 vs. NCBI nr
Match: KAF9688252.1 (hypothetical protein SADUNF_Sadunf02G0178000 [Salix dunnii])

HSP 1 Score: 317.0 bits (811), Expect = 1.7e-82
Identity = 176/291 (60.48%), Postives = 202/291 (69.42%), Query Frame = 0


Query: 1   MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFG 60
           MSVEILD ATIV+F+EDEEAF   I + F  LD D DG LSYGEMLKELQ LRVLETHFG
Sbjct: 1   MSVEILDGATIVNFMEDEEAFNVQIRDRFAHLDSDHDGRLSYGEMLKELQCLRVLETHFG 60

Query: 61  VDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLAMANDLPSESSSLALPT 120
           VDV+ DP+EL  VY SLF QFD D NG VDL EF +ET++MMLAMAN +      + L  
Sbjct: 61  VDVETDPDELVRVYDSLFVQFDHDLNGTVDLEEFKSETKQMMLAMANGMGFLPVQMVLEE 120

Query: 121 GSAGEKNGHRESTDGSEAYLYGSLAHPSAHQRPISEAAEMSVEILDSETIVNFVEDEAAF 180
            S  +K    ES                          +MSVEILD  TIVNF+EDE AF
Sbjct: 121 DSFLKKAAEWESA-----------------------KLKMSVEILDGATIVNFMEDEEAF 180

Query: 181 GAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQF 240
              IR+RFAHLDT+HDG LSY EML+ELQ LRV +  F +DV+ DPDE+  VY +LF+QF
Sbjct: 181 NVQIRDRFAHLDTDHDGRLSYGEMLKELQCLRVLETHFGVDVETDPDELVRVYDSLFVQF 240

Query: 241 DRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEEGSLLMKAVERET 292
           D DLNGTVDL+EFK+ETK+MML MANGMGFLPVQMVLEE S L KA E E+
Sbjct: 241 DHDLNGTVDLEEFKSETKQMMLAMANGMGFLPVQMVLEEDSFLKKAAEWES 268

[Close]

BLAST of CmoCh19G009000 vs. NCBI nr
Match: KAF9688250.1 (hypothetical protein SADUNF_Sadunf02G0177700 [Salix dunnii])

HSP 1 Score: 317.0 bits (811), Expect = 1.7e-82
Identity = 176/291 (60.48%), Postives = 202/291 (69.42%), Query Frame = 0


Query: 1   MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFG 60
           MSVEILD ATIV+F+EDEEAF   I + F  LD D DG LSYGEMLKELQ LRVLETHFG
Sbjct: 1   MSVEILDGATIVNFMEDEEAFNVQICDRFAHLDSDHDGRLSYGEMLKELQCLRVLETHFG 60

Query: 61  VDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLAMANDLPSESSSLALPT 120
           VDV+ DP+EL  VY SLF QFD D NG VDL EF +ET++MMLAMAN +      + L  
Sbjct: 61  VDVETDPDELVRVYDSLFVQFDHDLNGTVDLEEFKSETKQMMLAMANGMGFLPVQMVLEE 120

Query: 121 GSAGEKNGHRESTDGSEAYLYGSLAHPSAHQRPISEAAEMSVEILDSETIVNFVEDEAAF 180
            S  +K    ES                          +MSVEILD  TIVNF+EDE AF
Sbjct: 121 DSFLKKAAEWESA-----------------------KLKMSVEILDGATIVNFMEDEEAF 180

Query: 181 GAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQF 240
              IR+RFAHLDT+HDG LSY EML+ELQ LRV +  F +DV+ DPDE+  VY +LF+QF
Sbjct: 181 NVQIRDRFAHLDTDHDGRLSYGEMLKELQCLRVLETHFGVDVETDPDELVRVYDSLFVQF 240

Query: 241 DRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEEGSLLMKAVERET 292
           D DLNGTVDL+EFK+ETK+MML MANGMGFLPVQMVLEE S L KA E E+
Sbjct: 241 DHDLNGTVDLEEFKSETKQMMLAMANGMGFLPVQMVLEEDSFLKKAAEWES 268

[Close]

BLAST of CmoCh19G009000 vs. NCBI nr
Match: KAF9669587.1 (hypothetical protein SADUNF_Sadunf14G0123000 [Salix dunnii])

HSP 1 Score: 316.2 bits (809), Expect = 2.9e-82
Identity = 174/291 (59.79%), Postives = 203/291 (69.76%), Query Frame = 0


Query: 1   MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFG 60
           MSVEILD ATIV+F+EDEEAF  ++ + F  LD + DG LSYGEMLKELQ LRV+ETHFG
Sbjct: 1   MSVEILDGATIVNFLEDEEAFNVSVRDRFAHLDSNHDGQLSYGEMLKELQGLRVMETHFG 60

Query: 61  VDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLAMANDLPSESSSLALPT 120
           VDV+ DP+EL  VY SLF QFD D NG VDL EF AETR+MMLAMAN +      + L  
Sbjct: 61  VDVETDPDELVRVYDSLFVQFDHDLNGTVDLEEFKAETRQMMLAMANGMGFLPVQMVLEE 120

Query: 121 GSAGEKNGHRESTDGSEAYLYGSLAHPSAHQRPISEAAEMSVEILDSETIVNFVEDEAAF 180
            S  +K    ES     +Y                     SVEILD  TIVNF+EDE AF
Sbjct: 121 DSFLKKAVEWESAKLLASY---------------------SVEILDGATIVNFLEDEEAF 180

Query: 181 GAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQF 240
              +R+RFAHLD+NHDG LSY EML+ELQ LRV +  F +DV+ DPDE+  VY +LF+QF
Sbjct: 181 NVSVRDRFAHLDSNHDGQLSYGEMLKELQGLRVMETHFGVDVETDPDELFRVYDSLFVQF 240

Query: 241 DRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEEGSLLMKAVERET 292
           D DLNGTVDL+EFK ET++MML MANGMGFLPVQMVLEE S L KAVE E+
Sbjct: 241 DHDLNGTVDLEEFKAETRQMMLAMANGMGFLPVQMVLEEDSFLKKAVEWES 270

[Close]

BLAST of CmoCh19G009000 vs. NCBI nr
Match: CAN69749.1 (hypothetical protein VITISV_027019 [Vitis vinifera])

HSP 1 Score: 303.1 bits (775), Expect = 2.6e-78
Identity = 175/300 (58.33%), Postives = 207/300 (69.00%), Query Frame = 0


Query: 1   MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFG 60
           MSVEIL+ ATI  FVEDEEAF + + + F  LD D+DGVLSY EMLKELQ LRV ET FG
Sbjct: 1   MSVEILNGATIDGFVEDEEAFNSWVHDXFAALDEDQDGVLSYEEMLKELQCLRVFETXFG 60

Query: 61  VDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLAMANDLPSESSSLALPT 120
           +DVK D +E++ VY  LFSQFDRD NG +D  EF   T++MMLA+A+ L      + L  
Sbjct: 61  IDVKTDADEVAGVYCFLFSQFDRDSNGVLDFEEFKTATKRMMLAVADGLGLLPLQMILEE 120

Query: 121 GS--------AGEKNGHRESTDGSEAYLYGSLAHPSAHQRPISEAAE--MSVEILDSETI 180
           GS           K  HR S DG    L  SL+  S     +S  AE  MSVE+LD  TI
Sbjct: 121 GSFLKKAVEWESTKLFHRHSDDGIYESLPISLSF-SWILASLSAGAEERMSVEVLDGATI 180

Query: 181 VNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVS 240
           V+FVEDE AF   I +RF++LDTNHDG LS +EML+E QSLRV +  F IDVK DPDE++
Sbjct: 181 VSFVEDEEAFNGLIHDRFSNLDTNHDGFLSXAEMLKEFQSLRVFETHFGIDVKRDPDELA 240

Query: 241 SVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEEGSLLMKAVERE 291
            VY +LF++FD D NG VDL+EFK ETKRMML MANG+GFLPVQMVLEE S L KAVERE
Sbjct: 241 HVYBSLFVKFDHDANGAVDLEEFKKETKRMMLAMANGLGFLPVQMVLEEDSFLKKAVERE 299

[Close]

BLAST of CmoCh19G009000 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 112.1 bits (279), Expect = 7.8e-25
Identity = 53/111 (47.75%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 1   MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFG 60
           M V ++D +T+ SFV+DEE F+ ++ E F  LD+++DGVLS  E+ K  +S+R+LE+HFG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  VDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLAMANDLPS 112
           VDV    +EL+++Y S+F +FD D +G VDL EF +E +K++LA+A+ L S
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGS 111

[Close]

BLAST of CmoCh19G009000 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-09
Identity = 38/128 (29.69%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 164 ILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVK 223
           ++ S+T++ F+ D  +F +   + F  LD + +G+LS SE+ + L ++   +++      
Sbjct: 5   VITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESEV----- 64

Query: 224 LDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEEGSLL 283
              DE  +VY+A+F +F  DL        F+     ++  MA G+G  PV MV+    L+
Sbjct: 65  APGDETDNVYNAIFERFGEDLVP----KNFRDLIAEILTAMARGIGNSPVIMVVHNDGLI 123

Query: 284 MKAVERET 292
           MKAV  E+
Sbjct: 125 MKAVLHES 123

[Close]

BLAST of CmoCh19G009000 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-06
Identity = 35/125 (28.00%), Postives = 57/125 (45.60%), Query Frame = 0


Query: 163 EILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDV 222
           ++LD   IV  VE+E  F  F+ ++F  LD + DG LS +E+   +  +           
Sbjct: 13  QVLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADIGAALGLPAQGT 72

Query: 223 KLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMGFLPVQMVLEEGSL 282
             D D    +YS +  +F       V   EFK     ++LGMA G+   P+ ++  +G  
Sbjct: 73  SPDSDH---IYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGED 132

Query: 283 LMKAV 288
           L + V
Sbjct: 133 LSEFV 134

The following BLAST results are available for this feature:

BLAST of CmoCh19G009000 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh19G009000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A5B6N0	1.2e-78	58.33	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_027019 PE=4 SV=1	[more]
A5BTB3	3.6e-78	58.00	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_036814 PE=4 SV=1	[more]
A0A2P5XYB2	1.0e-72	54.30	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12312 PE=4 SV...	[more]
A0A6J1GKZ8	1.7e-67	100.00	uncharacterized protein LOC111455224 OS=Cucurbita moschata OX=3662 GN=LOC1114552...	[more]
A0A6J1I262	2.3e-64	95.62	uncharacterized protein LOC111468343 OS=Cucurbita maxima OX=3661 GN=LOC111468343...	[more]

BLAST of CmoCh19G009000 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645727.1	1.6e-96	67.12	hypothetical protein Csa_020381 [Cucumis sativus]	[more]
KAF9688252.1	1.7e-82	60.48	hypothetical protein SADUNF_Sadunf02G0178000 [Salix dunnii]	[more]
KAF9688250.1	1.7e-82	60.48	hypothetical protein SADUNF_Sadunf02G0177700 [Salix dunnii]	[more]
KAF9669587.1	2.9e-82	59.79	hypothetical protein SADUNF_Sadunf14G0123000 [Salix dunnii]	[more]
CAN69749.1	2.6e-78	58.33	hypothetical protein VITISV_027019 [Vitis vinifera]	[more]

BLAST of CmoCh19G009000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44310.1	7.8e-25	47.75	Calcium-binding EF-hand family protein	[more]
AT1G54530.1	1.6e-09	29.69	Calcium-binding EF hand family protein	[more]
AT4G38810.2	1.3e-06	28.00	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 24..52 e-value: 0.55 score: 19.3 coord: 232..260 e-value: 10.0 score: 9.7 coord: 73..101 e-value: 3.0 score: 13.9 coord: 183..211 e-value: 0.33 score: 20.0
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 24..97 e-value: 2.1E-9 score: 37.7 coord: 184..255 e-value: 8.3E-10 score: 39.0
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 228..263 score: 9.101698
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 179..214 score: 9.324862
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 20..55 score: 9.018011
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 69..104 score: 9.464338
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 184..253 e-value: 8.86581E-7 score: 43.6905
None	No IPR available	GENE3D	1.10.238.10		coord: 4..113 e-value: 1.7E-10 score: 43.1
None	No IPR available	GENE3D	1.10.238.10		coord: 130..267 e-value: 2.7E-11 score: 45.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..135
None	No IPR available	PANTHER	PTHR34574	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 1..112 coord: 160..291
None	No IPR available	PANTHER	PTHR34574:SF10	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-LIKE	coord: 1..112 coord: 160..291
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 82..94
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 33..45
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 192..204
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 23..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G009000.1	CmoCh19G009000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding