CmoCh19G003500 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGATTCAAGAGGTCTCGCTTTTGTTGATGAATTCAGCTGGATAGGTATGTCTTATGTGAGTCTTTACCTAGTTTATAGTACCCACACGCTTCGGTTGATGTTACCGTAATCTTTTCGTGATGTGTTCTCGTCGTGACACAATGGACTTGGCAGCATCAGGCAAAGAGAGGTAAAGGTCATATATTTGCAAATTGCTATGAAATATTGGTGTCTTGAGAGGCTGCATTATATTTTGCCAAAACTCATGATTTGTACCATGATAACATCTTACACAAGAATCATTAGAAGTGGCATATTCTAACAGTTTGTGTACGACTTTTGGCTAGCATTTTAATGGGATAATCTGATTAAGAGAATGATTCGAATGCTTTGACCAATTTATTCTTTTGACATTCTTCACCATTACCACTTGGTTCAAGTCAAAGATTTAGTTCGACATATTCTCTTTATAAGGCATTTGTGGATCTAATTCGAATGCTTTGACCATTGATTTTTTTTTTATAAGGCACTTGGTTCAAGTCAACCTCTTTATAAGGCATGATGTGATGTACTGATAATATTGTTGGATCGATATGACAACCCTAGAGGGGTGAATAGGGTTTCAACAATATAAATATTAAAATTTTCTAGTAACAATAAAACTTATATTATGCAATAAAACTTAACAATAATTTAGAATTTAAATAGGAAAAGAGTTAGAAAATATAACACCATGGTTTGGTCAAACTCGACCTACTCCACTCCCCAAGCTCCTCTTGGGAATTTGAATAAAATTTTCTAACTCTTTCCTCAGATCAGAGTCCAACCGCTACTTTTATGAGTGCAAGAGCAAACTCAATTCTTTCCACAGCTCAGGATCAAACCGGTACACCGTTCTTTTTACGAGTTCAAGAGCAAACACAATCCTTTTCACGGCTCAGGATCAAACCGGTACAACTATCTGAAATCTTATAGAAACACACAACTCGAAACACACAACTCTCTGAAGTAATAGATTTACAATTTTCTCACAATACAATAGACATCTCTCTCAAGAATAAGATAAACCATAAATAGAATTGGACGCTTCGGAGAGATTTCTCACAATACAATAGACATCTCTCTCAAGAATAAGATAAACCAGAAATAGAATTGGAAGCTTCGGAGAGATTTCTCACAATACAATATAGAATTGGAAGCTTTGGAGAGATTTTTCACAATACAATAGACATCTCTCTCAAGAATAAGATAAACCAGAAATATAATTAGAAGCTTTTGGAGAGATTTCTTATAATAGACATCTCTCTCAAGAACAAGATAAACCAGAAATAGAATTGGAAGCTTTGGAGAGATTTCTCACACTACAATAGACATCTCTCTCAATAATAAGATAAACCAGAAATAAAATTGGAAACTTGGGGGAGAGCAACAATGGAAGCTTTTAAAAAAGTTGTGTATTGTGTTCTATGTTCTGTGTGTTGTGTTTTCGATTGATCCACGATGTCAATTTTGCCGTTGGTCCATGATGTTAATTTTGTCACCACATCATCGTGTCCGATATCTTGTTTTGAATTCGATTGGTCCATGATGTCAATTTTGCTCCCACATCATCACGTCGGGTATCTTGTTTTGACTGAAAGTTCTTCGTTTTAGCTCTAATTTGAGTGAACCAAAAAAGACGTTGAAATCGTTATTCCCAACCTTACACTGTCTAAAAAATACTGAGAATTGTTAATAATTGAAGATAGGTTTGTTATCATCAAAACATCAATTAATTAATTAATTAAAATTAATTAATTTGAAATTAAGGAAAAAAAAAAAAAAAACAACAACTATGATAAATGTTATGGTGTAACACGTTTGGCGATATAGTACATGTTATATGATATGCTGATGATATATATATATATATATATACATCTTTGGTATTGATCTTTTACAGGGGAGGGAAGGTAATATCGCTGTACCCTGTAAGAATCAATAGGTGATTGAAGGAATAAATAGGGAGAGGAGCGAGCGAAGCAGACTGATAGTTTACGAGGGGCAGACAATAGAATTGTGAGACCGATAGGTGAATGGGCAGGTTCTAGAGCAAAATGGATACAAATTAGTGGCTGCTACTTAGTATGGGCAATGGGTCTGAAAAAGTCTCTAAACTCAAAATGGTGAGATATTTGTACCCTGTCGAAGTAAGGAACCATGACATATATGTTTGGAATAGATTCCTTTACCAATTGAGAGAGTTGAAAAAGCACTATCTCGTTGAAAGGTTCTATACATCTGCCCTTGATCAAGGCATTTAGATAAAGACTCGTTTTTTCCTCTTTTCGGATGGTAAATCTTTCTCAGAACATGGAGTGTGAATCAAAGCCCCATCTTTGAATTGAAATTGAGATATTGATGCAAGTTCTTCCCCTCTGAATAAGATAGATTCATATCTGAAAGAGGTTGACAATAAGTTTTTTCAAAATTGACTTTTTGTCCCTCTGTTAGGTTAGATGTGTTCTAGAAATGTCTATGATCGAGTAAATAGCTCGACGAACGAATGGATTGAATCGAATTGGAAAATGGAAAAATTTGTACAAGTTATACCTTTCCACTTTGTGTAAAATAGTCAGGTATGAATATGTTAGATACTTGTGACTTGATTGGTTAAATAGTATCTCTCTCCCAGCAGCATGTTTTTTTTACGGCCGCACAAAGAAAAGATTTTGTTGCGAATGAACAAGATATTGAGGAATTGTCCATACGTCAAATCATAATTATTGATACGGGTCTTTTCCACATAACCAACATACATCAAAAGGGAATCTTTTGTTACAATAGAAGCAGAGTAGATAGAGTTGCTTTATAAAAAGAAGATATCAATGAACTTCTATGAAATGGTTTCACGGGATTTAGCCAATTGTCTTGATCGTGGGATATCATTGAGAAATAGGAGAGTGTTATCAAAGGATTTCCTGTGATTCTTTCTAGTATGGAATGAGTAAATCATTTACTTTGCTATCTTATCGAAGAAAAAGAAATTGTTATATTGTTCTTGATCAAGAATTTCTCTTTTTGGGAAGTCTCATGATCATCCAATAAGAAGGGTTTCCATTTTGTCAAATTCAAACTCTTTGAAGACCTATTGATTCTAACAACTGATTTTAGAGTTGATCATTCGGACCTTTCAATTCATAGATGTAGATCTCGGACCTATTAATGGAGATATTCTCGAAACTCATAAAGAAAAAAGGAAGTGAGTTAGAATAGAAGAAACTTGGACAAAAAGAAAGGAAGTGACTTAGACAGACAAATCCTTTTTATAGATAACATCATACCAATCCAGCGAATATAGATTAATATGTAATCGATCCAACACTACTTGAAAATGGCTCTTTCGCTCAGAAATGAAATATTCCTGGAAATTCTTGCTCCCACTCCCATTGGACCATTTCTATCTATATGCATTAGAATCCCGATTCATGGATCTCTCGAGAAAGAAAAATAAGAGGAAGAGGATCAAACCATTTCTTCTGACCCTTTTTCTTGATAAATCTTGGTTGATCGTATATTGCATTATAGTTCTATGATTAAGAGAAGAGTCTCATTTCCTATTTGATCCATTTTCATTCTATATTCTAAGTTGCGATCGGATCTATAAAAAGAATCGATTCAATACTTATGGTACTTATATTGGATTTGAATCTGATTTTGGATCAATATAGATTGACTGCCTCCATTATGTTGTTGCTAGCAAATACCACTCTTTTTTGTTTTGGATCTTCAAAATCATTCCCGGGGGAGGTCCGTACCCATTTTTTTTTGCTGATCCTTCGATTCATTCTCTTCATAAAAAAGAAAGAAAAGGTAGAACCAAGACATCCTTCTTTTTTGATGATATGAATCCAACAACTGATCACTTCCATGTACCTGAACGAGCAATTACAAGAAGTAATACAAATAAGATTCAAGAATCAAATCAAGAAAATAATGGAGTGGCTGATATTGGAAAGTAATTAGAAGACTTGCTTGGTAGTTGAATTACCAATTAAGGAAATTTATGAAAAGTAATTAGAAGACTTGACTTTGTTAGTTGAATTATCAATTAAAGGAATTTATTAATGTCTTATTTGCTTCAATTTGTATTTAATAGCATTCGTTACCATTTATTAGTGATTGGTGGCTGAACTTTATTTTGTTAGGGTTATCTCTTGAGCCTATTTAAAGACATGTAATATTTTGGGGGATTTTGGTTGAATACAGAAAAAACCTTTGTGTTTTCTTGATACCCTTTTGGTGTTATTCTTTTTCAAACCTTGCTTTATGATGTTTAAACCGATTCATTGAATTAGTTTTGATCAAGCTAATTCTGGAGTGAATTGTCTTGGTATCTAAGAGTGACCATCATAGATTCCAAGTTTGATCTAAGAGTCATTCATCTTCTAACCAACTCTTGGTTGGAATCAATCCGTTAAGTTAGCTTTCTCGGTGAGCGTTTTGCAAGGATTCTAGAAGGACCTCTAGCTTTGCAAATTCCAGCATTGTAGGCGTTTATCATTTCGATTCATCCCTTTACTCATGAAAGAATTCTTTTTGATCCAATCTGTAGGAATCAAGGCAAATCCCTTATGATACACCACATCCGGCTCGGTTATTAATAGAGTGAATAGATCTTCCATTTCTTTCAATCTCTCTTCTGATTCAAAATTGTGGTGTAAGGTGTATCCCCTCCAGTTCCGGTCATGGAATAGATGAAATAAATAAATGGATTTTTGTGAAAGAATGAAATCTTATTGTAACGGTCCATATCCAATTCAGCCTTCGGAACAATATCACACCCCGAATCTGATTCAATAGGATGAATTGAGACGTTATTTTGATAACACGTATATATCTTGAATATATTAACTATTTCTTTCTTTTCCGATCGCCTGGAAGGAAGGGACAAAAGATCTTCTTTCTTCAACAATTTCTGATCTCTAGTGAACCTCTTAGTAGGATTCGAACCCATATTCAGTTCTTACCATTTGTCAGACAGAAAAGAACAAATGGATCTTGTAGGATTCCCGAGAAATTCTACAATTTCTTCCCCGGAATCGGATGATTATTCATCTGCTTCTCACTCACATTCTTTGAATAGCCGAGACATTGAGCAATATCCAGAAAAGCATTTTGGGAATCGGTCTGATTCTATCTCTGTTCGTTCTGTTTGAAGAAAGGAAGGATCCCAAAGAATCGATCTTTCTTTTTGTTGTTGAATCTCTCTTTGATTGAGAAATGTATGGTACTCCGAATCCTCATTACTAATGGAATCGAAATGATCTCTGGATTGATCATTAGATTCTTTCAATTGGCTAGAATCCGTTACTTGAACGAAACTAGATCTTGCTTGTGGAATCATATTGAATATTTGACAAGACATTCCGTACCTTGCTAAAAAATCGATCCTTATTTACCAACCAATTGTCTAACCAAATCCGATTCGTGCAGATGGATTCTTCCCCTAACTAATGAAGGAAGAGATCTTGGAGGAATTGCCACATATGAAATTGAGCACAATTTTGCAAAGAAATAGACCACTTCTTTCTCGAGAAGAGATGGGAAAGAAAGATGCTCAATATCATTTGATTGAATAGTTCTCCCATCTCCTTGTTGTTTGAAGAAGCTCAATTGGTCTTTTTTCATGAAAAGCAAGAGATAAGAAATCCAGTCTTTCACTAAGATTTCAAATAGCTGTCCCGAATTCAAGTTGATGCTCTTTTGCCTCTTCCTCGGAGAAAGACGATCAAACAATTACCAATCATGGTCCTTGCCTCTTTCTCTTTGAATGAGATCTCATCAATTCCAGCGACGGTTTCATTAGATATATTACAATGAGCAGGAATCCCTCTTTTTTCCAATCCAGTTCTTCCACCACCGCGAACCCCAGTTAGATTCAGGCATGATACACTTTTGAGTTATTGGGAGAACCCAAGTACTCTCTTTCGGATCCAGGAAAGAGCTCTCAGAGATCCTTTTTCCTTTTTGAAGATGAGCAAAACAATCCACCTATTGATATAGTATAGGAAGAGCCAAAATCTTCTTCCAATGTCTCATTTCTGGGTCCAATGAATAGGTAGAGGAAGAAACCCTATCAAATAGAGTTTCCTTTCGATTGTTAATACGTGATAGATATAAGGAAGGACCACTACTACAAATAGTACTACACCCTTGATCGTGAAATATTGATTGCTTGTTGAACCCTGTGAATTGCGTGAAAGTAGTATACTCTAAATTCGGGAGTCTAAGAGTTTTATAAAACGGGATGGATGAAAACAAATGTGAATGAAAGATACCAGGCCATGAATCTAAAAAATAGTAAGAATGATTGATCTCTCTCAATTAGAAAATCCAAGATTGGAATTGATGTCCTTTCATTGAGGCCTCCTAAATTGCATTGATTTCTCCTAAAGATTGAATTGCAAATTGGAATTTGGTTATTCACCATGTACAAGGATCCTCCGCTAAGCATCCATGGCTGAATGGTTAAACCGCCCAACTCATAATTGACGAATTCGTAGGTTCAATTCGTACGGATGCACACCAATGGGACCCTACAATAAGTCTATCTCATCATCTAGACATATTGGTGTGGTGTATATTCATTATGAACTTGAACTTGCATTCTTATTGAGACTCGAACTCATACAGAAGCGGAAAGGCTAGAAGGAAGAATGAATGGGACCCTATTACAAAAGTACTCGGTTATTGGGACCCTATCTATTATGGGACATACAATACATTACAGACAAAAGTACTCAGTTATTGGGACTATATTATACGACATACAATGCTATATATTCAATATGGATATACATGGGACTCTATTATAGGACATACAATAGGACTCTATTATAGGACATACAATAGGACTTTGTTATAGGACATACAATGCTATATATTCAATATGCGGGACCCTATTATGCACCCTATTATAGGGCATTGGTTATGGGACTCCATTATAGGATGCATTATAGACAAAATATGCACCCTATTATAGTATTGGGACTCGAACTCATAGGGAAACGGAAAGGCTAGAAGGAAGAATGAATGGGACCCTATTATGAGACATACAATGCATTACAAACAAAATATGCTGTATTTACAGACAAAAGTACTCGGTTATTGGAGAAAAAGAAATACTTCTAATGTCGAACTCGTCTTTGGCGTCAAGGTAATAGCTATGAATAGTCATCGACTCCCAGGAAAAGCTAGAAGGAAGAATGAATGGGACCTATTATGGGACATACAATGCACATTACAGACAAAAGTACTCGGTTATTGGAGAAAAAGAAATATACTTCTAATGTCGAACTTGTCTTTGGTGTCAAGGTAATAGCTATGAATAGTCATCAACTCCTGGGAAAGGCTAGAAGGAAGAATGAATGGGACCTATTATGGGACATACAATGCATTACAGACGTATGATCATTACGCTTCAACCGGGTTATTCTATTCTATTATATTCCACCTCTTAGAAAGAAAAGAACTGAAAGAAAATTAATAGCATACTATTCTTTCGGAGCACGAGTTTTCGGTTTTGTCTTTCCTTCTCAAGAGAATTAAAGGTGAGGGGAGAGTCAATTCAATCCTCAGCCTATTTACCGAGTTCAATGAAAGAAGGGACAGGTGAATGAACTTGACCTTCAGATCATACAACCTATTTACCTTGTGAAAGAAGTAATAGTCCGAGCAATGGATTGAATCAAAGCCAATTTACCGAGTTCTCGAAGCGAGAGGAAAGAAAAGCAAAGAGAAGAGAAAGAATAAAACACCTAGTTACTTATACCTTGTGAAATCTGGGAGTGAACGATCATGAATAAGGAGTCTTTGTTTACGTTTACAGTTCAATCAGGCGGAGAGAGAGAGGAAATGAATTAGCGGCTTTACCCCCAAAATAAGGGAAGGGAATAGAGGGGAAGAAGCTTGACCGGATGATCATACAACCTATTTACCTCGTGAAAGAAGTAATAGTCCTGTTAAACTCGAATTCATCTTGCTTGAGTGGAGTGGTTACAGTCTTTGAATAACTCACAAGAACTTCCTGAGAATAACTCACAAGAACGGAAGGGAATAGAGGTTCTGTCGAATGAATAGGAGTATTGATCTTTTACTGTTCAGGGCGAGTAAATGAATTGAATATGCTTTACCTTCTTCAATGACCCTAAAAATAGGGAGAGCCGAAGTAGTTCTGTCTCATTCATAAGGAGTTGAGTCTTGACTTCCTGTTCTGTCTCTTTGTAATTACCTCTGAAATGGCCTCAAAAATAGGAGAGAAGTCAACTCTCGAGAATCATTCTTACTTACAATAGAGTAAGTGAAAGAATTAAGGTTTCTTCTTATTCTCATTCATTCAGCCTATTTACCGAGTTTGTGAAGTAGTTCAGGAGAATGAATCTTCAGTCTTAGTTGAAGTGAAAGAATAAAGAGGAGCGAAGCAAAGAGACCGATAGGGAGAGGAGCGAAGCAGCTTTACCGGAGAGTGAAAGACTGA ATGGATGATTCAAGAGGTCTCGCTTTTGTTGATGAATTCAGCTGGATAGGAATCCCTCTTTTTTCCAATCCAGTTCTTCCACCACCGCGAACCCCAACAAAAGTACTCGGTTATTGGAGAAAAAGAAATACTTCTAATGTCGAACTCGTCTTTGGCGTCAAGGTAATAGCTATGAATAGTCATCGACTCCCAGGAAAAGCTAGAAGGAAGAATGAATGGGACCTATTATGGGACATACAATGCACATTACAGACAAAAGTACTCGTCATCAACTCCTGGGAAAGGCTAGAAGGAAGAATGAATGGGACCTATTATGGGACATACAATGCATTACAGACGTATGATCATTACGCTTCAACCGGTGAAAGAATAAAGAGGAGCGAAGCAAAGAGACCGATAGGGAGAGGAGCGAAGCAGCTTTACCGGAGAGTGAAAGACTGA ATGGATGATTCAAGAGGTCTCGCTTTTGTTGATGAATTCAGCTGGATAGGAATCCCTCTTTTTTCCAATCCAGTTCTTCCACCACCGCGAACCCCAACAAAAGTACTCGGTTATTGGAGAAAAAGAAATACTTCTAATGTCGAACTCGTCTTTGGCGTCAAGGTAATAGCTATGAATAGTCATCGACTCCCAGGAAAAGCTAGAAGGAAGAATGAATGGGACCTATTATGGGACATACAATGCACATTACAGACAAAAGTACTCGTCATCAACTCCTGGGAAAGGCTAGAAGGAAGAATGAATGGGACCTATTATGGGACATACAATGCATTACAGACGTATGATCATTACGCTTCAACCGGTGAAAGAATAAAGAGGAGCGAAGCAAAGAGACCGATAGGGAGAGGAGCGAAGCAGCTTTACCGGAGAGTGAAAGACTGA MDDSRGLAFVDEFSWIGIPLFSNPVLPPPRTPTKVLGYWRKRNTSNVELVFGVKVIAMNSHRLPGKARRKNEWDLLWDIQCTLQTKVLVINSWERLEGRMNGTYYGTYNALQTYDHYASTGERIKRSEAKRPIGRGAKQLYRRVKD Homology
BLAST of CmoCh19G003500 vs. ExPASy Swiss-Prot
Match: Q06FM2 (50S ribosomal protein L23, chloroplastic OS=Pelargonium hortorum OX=4031 GN=rpl23-A PE=3 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.6e-04 Identity = 24/33 (72.73%), Postives = 24/33 (72.73%), Query Frame = 0
BLAST of CmoCh19G003500 vs. ExPASy Swiss-Prot
Match: Q7FNR4 (50S ribosomal protein L23, chloroplastic OS=Atropa belladonna OX=33113 GN=rpl23-A PE=3 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 2.8e-04 Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 0
BLAST of CmoCh19G003500 vs. ExPASy Swiss-Prot
Match: Q3C1N5 (50S ribosomal protein L23, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=rpl23-A PE=3 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 2.8e-04 Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 0
BLAST of CmoCh19G003500 vs. ExPASy Swiss-Prot
Match: Q33BY9 (50S ribosomal protein L23, chloroplastic OS=Nicotiana tomentosiformis OX=4098 GN=rpl23-A PE=3 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 2.8e-04 Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 0
BLAST of CmoCh19G003500 vs. ExPASy Swiss-Prot
Match: Q2MIE5 (50S ribosomal protein L23, chloroplastic OS=Solanum bulbocastanum OX=147425 GN=rpl23-A PE=3 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 2.8e-04 Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 0
BLAST of CmoCh19G003500 vs. ExPASy TrEMBL
Match: A0A6G9IFP9 (Ribosomal protein L23 OS=Cistanche sinensis OX=241807 GN=rpl23 PE=3 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 5.1e-09 Identity = 40/75 (53.33%), Postives = 40/75 (53.33%), Query Frame = 0
BLAST of CmoCh19G003500 vs. ExPASy TrEMBL
Match: W8RN00 (50S ribosomal protein L23, chloroplastic OS=Praxelis clematidea OX=287011 GN=rpl23 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 8.7e-09 Identity = 40/75 (53.33%), Postives = 46/75 (61.33%), Query Frame = 0
BLAST of CmoCh19G003500 vs. ExPASy TrEMBL
Match: A0A345BCL7 (50S ribosomal protein L23, chloroplastic OS=Lindera glauca OX=332435 GN=rpl23 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.3e-07 Identity = 37/75 (49.33%), Postives = 40/75 (53.33%), Query Frame = 0
BLAST of CmoCh19G003500 vs. ExPASy TrEMBL
Match: A0A109X1C7 (50S ribosomal protein L23, chloroplastic OS=Bletilla ochracea OX=862845 GN=rpl23 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.0e-05 Identity = 36/75 (48.00%), Postives = 36/75 (48.00%), Query Frame = 0
BLAST of CmoCh19G003500 vs. ExPASy TrEMBL
Match: A0A2D1VK55 (50S ribosomal protein L23, chloroplastic OS=Pleione bulbocodioides OX=141752 GN=rpl23 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.0e-05 Identity = 36/75 (48.00%), Postives = 36/75 (48.00%), Query Frame = 0
BLAST of CmoCh19G003500 vs. TAIR 10
Match: ATCG00840.1 (ribosomal protein L23.1 ) HSP 1 Score: 45.1 bits (105), Expect = 5.8e-05 Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 0
BLAST of CmoCh19G003500 vs. TAIR 10
Match: ATCG01300.1 (ribosomal protein L23 ) HSP 1 Score: 45.1 bits (105), Expect = 5.8e-05 Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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