CmoCh19G002820 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh19G002820
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionCRM domain-containing protein
LocationCmo_Chr19: 2060651 .. 2067296 (-)
RNA-Seq ExpressionCmoCh19G002820
SyntenyCmoCh19G002820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTGCTTTCTAGCGCTGATTCCATCTCTTTCTTTCTCGCATTCATGCTCTAAATTTCGTCGATTACTTTTAGAAACTAGGTCAAATTTGATTGGGGCAAAAATACTTGGGTGAATTCCTTAAAATTTTCCATAATTCGAGCGCTACAAAGGCACAGTTTCACCCTGAGTTTGAAAATTTGCCAGTTTAGCGGCAAAATTTCCCTGAATTCTCAATTCCCCCATAGCTAGAAAATTGTTGATGGTGAACCAGTCCAGCCATTTTCAACTCTGGGGTTGTAGTGGATTCCCCTTTCATCTTATTTCTGCAGTGAACGAACAATCTGCTAGGGATTGATTGATTGATTGATTTAGGACCATGTCTCGCGGTCATTCTCTATCCATTGCCATTTCGAGGTACTTTCTCCATCTCTTAAAATCTCATGGGTTTCATTCAAAAGTTTTGGAATCGAATACAAATCCTGCTTATTGTATTACATTAGTTCATCTCGTAACAGAGGGTCTCTGCTTGTTGAAATCTGTTGTACTCATTATTTAGCATTATAATAGAAGATCATTGGAGGAAGATTTCAGGTTGTCTATGAGATTTTACTTCGGAGATATATGGAATTGGATGATTATGGTGTGATATTTATGCAGGGATTCATTATATGGATTCATTTCTCTGATTAGAAATGTTTCACGTCTATCTTTATTCAACATACCCTCATCATTTGGGCAGTCCTCATATCGAAGTTGTGAGTATCAAATAAGTAATTGTATATCGAAGTCTCTCCAGGAATCGACGTCTATACGCTATCCACCGGGCTTCTTTTTCGCTAAGCGATATAGTATGTGTGAGAGCCTTGGTGGGTTTGAAAAATGGCAATCTGTTAGGCATTTTAGCAATGGGGCTGTGGAGCTGAAGACAGACAGCAATATTGTCAGGTTTTCTTTTGGTGGGTCTTCTAGTACTAACGGTTCCCCACGGAAACAAAAGAAGGTGGCAAAAGCCAAATTGTCTAAGAAGGCCAAATTGAATGAACTCAGACTCTATCGTCTTAAGGCGAAAAAGAAGAAGACGTCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGTTGGATACCATCTATAATTTATAGTTATACTAACAGCTTTTAATTGATTGCTAGTCTTCCTCTATAGAAAAGTGTGCCACAATCTTCTTGTAAGAGGAGTCTTCGATTTCAATACTTACTATTAATCTTTTTATCCATATATAATATGTTTGTTACCGGTATGAAGGTGACTGAGGTTTGATTAGCATTTCTTTGTGTAGTTGTGTGCATGTGATAAAATGCCTAATGTGAGATCCCACATCGGTTGAGGAGGAGAACGAAGCACCCTTTATAAGGATGTAGAAACCTCTCTCTAGCAGACGCGTTTTAAAAACCTTGAGGGGAAGTCCGAAAGGGAAAGCCCAAAGAGGACAATATATGCTAGCAGGGGCTTGGACCGTTACGAATGGTATCAAAGCCAGACACCGGGCGATGTGCCAGTGAGGAGGCTAAGCCTCGAAGAGGGTGGACACGAGGAGGTGTGCCAGCAAGGACGCTGGGCCCCGAAGGAGGGAGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACAAAGCACCCTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGATGCGTTTTAAAAACCTTGAGGGAAAGCCCGAAAGGGAAAGCCGGCTGTTACAGCTAATAACCACTTTTTCTCTGACTTCTTCTGCTTGACACGTTTGTACAACTATGAAAGTTTATTCTGTGTATTGACCATGTATGACTAATAATCCATAATATTCAGTAATTGTCGTCAAAATTTAACTTGAAGTATCATGTAAAATCGTTTCTTTTCAATAAGAATCGTTTATATTAAACAAAAATAAGTATTTCATACAAAAATTTCAAAGCAAGCGTCAAGAAGAAAAACATTTTATGTGATTTTTATACCTTCAACACAATGTAAGTGAATTTTAAAGGTTCTGTTGAATTTTGAATTAATATGTAGGACTAATGGAACTCTCTTGGACCTCCTAGTGATCATTTGTTCTTATGAACCATGAAGTTGTTTGATCTTATAATGTCTTGAAGGATCCAATGATATATGTAGGCCAAAAGGAAAGAAGCGTGGCTGATTGAGAAGTTGAGGAAATTCGAGGTTCCAAAATCTGTTCTTGAAAATTATGATCCTGAAATTCTTACTGAGGAGGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAAGAAGAACTTTATGCTGTTGGGGAGGCGAGGAGTCTTTGGTGGAGTTGTTCTTAATATGCATTTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAACCTGGGCAGGTTCATGAATATGCTGAAGAACTTGCTCGGTTGAGTAAAGGCATTGTGATTGATATTAAACCCAACAACAGCATAATCTTTTATCGGGGAAAGAACTATGTGCGGCCTGAAGTAATGTCGCCTTCAGATACGCTATCGAAAGACAAGGTAAGCTCAGCTCATTCCTGAAAACTGAAATGATCAAAGAAAATAGATTTAATTGATTAGTGTTGAAATTACAATGGCAAATTAACCTAATCTGCAGAATTTATTTCATAAGTAGCAGCACCACCCCCCCACCACACACACACACTCTCTGCAGAGGTTTGATAATATTTACTCTTATGCATATGAAATTTTTAGTTTTATATGTTTTATAGAAACTTATGCATATGAAATTTGTAGTTTTTACAATAATTACTTTGTGAATATGTTATTTGTAAGCTTATAGAACCTCATGTTATTTATGGACGAGAATGAACATTCGCAGGGAGGTTGTGAGAGCTCCTGCCTCCTGCCTCTCCAATGCGGATCTGTTCACAAAATGCCAAAAGATGATCCCTCCCTGGCTACCCTGTATATACTAGACTCTCTCCCGGGCCTTGCTGGTCATGAAACTAGCTGAAGGGGCCCACACGCGCAAAATACTCTCTTTTGTGCTCTCCCTCTCTTACCTTTTTCTCTTATATACATTTTTTATAGGGGTCTATGTGAGGTCCCACATCGGTTGGAGAGAAGGACGAAGCATTCCTTATAAGAGTGTGGAAACCTCTCCGTAGCAAACGCGTTTTAAAACCGTGAGGCTGACAGCGATACATAACGGGCCAAAGTGGATAATATCTGCTAATGGTGGGTTTGAGTTGTTACAAATGGTATCAGAGCCAGACACCAGATGGTGTGCCAGCAAGAACGCTGGGCCATAAGGGGGGTGGATTGTGAGGTCTCACGTCAGTTGGAGAGGAGAACGAAGCATTCCCTATAAAGGTGTGGAAACCTCTCCTTAGCAGACGTGTTTTAATACCGTGAGGCTAATGGCGATATATAACGGGTCAAAGCGGATAATATCTGCTTGCGGTGGGTTTGGGCTGTTACAGTCTACTATAAACTTTTTGAATAAAAGTGTAGATTCTGCACCTCTTCTACTATTTTATTTCATGCCCATCTTTGTTTCTTGCTTTTCTGTATCTAAAGAAACGTTTGTGCCTTCTTTATACCTTCCGGCTCAAAGATCACCCAAGATACTTTGCATACCTGCTTCAAACCCAAGTTTTGGACTATGTAAAGTAGTAAGATTACCTTTCTAACGAAATTTCTAATGGTTCGAGTTCAGTTTATTGTAACCAAGCGTTCGGCTATTTGGTTAGAAAGGAATAGATCACTTTTTTAGAAAAAGGCTCCAATAGGTTGGATTGTTCAAATTCAGTCGATGGCTTCACTAGTTCACTTTGACCTTCTATCCCAAAATTTTATGTTTTGTTCTTAGACAGTCCTTTTTTACCCCTTCTACATCAAAACAGCTTTAAACAAGCAACATAACTTTTCGCATGTAAAATATTGCAGGCCTTGGAAAAATACAAGTATGAACAATCACTTGAACATACAAGTCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTTCAGAAGCATCTTGCTCAGTTCAAGAGAAAGAAGGAAGAGGCTGCTTTAGAATTCATGGTTAACTCATGACTGGTAATATCTCTTTTTTACTTATCATTTCCCAGTCAATTATTGTCGTAGTTGGTTCTTGCCAAACATAAATGTTCTTTGAATAAGTTGTTCAACAATCTAAAGCCATTGTTGTAACAATCTAAACTGTTGTGGTATGATGCTGCTACTCATTCACCCTATTTATTGAACCTTATTAGCACTGAAAAGGTGAAAATAGGCACAGACTGCTTTTTACAAACTGGTTCTTCTTACTACAACTGCTTGTATGCAAGTAGCTATAAAGCCTATTTGAAGTTTATGGGGTCGTGCAATGATACAATCGGGAAACTATGGAGCTAGCTCTATTTCAACTTCAAATTGAAAAATAGCCACAAGTTTCATATATGTGAGATCCAACATCGGTTGGGGAGGAGAACGAAACATTCTTTAAAAAGGGTGTAAAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGGAGAAGCCCGAAAGGGAAAACCTAAATAGGACAATATCTGCTAGTGGTGGGCTTGGGCCGTTACAAATGGTATTAGAGCCAAACATCGGGTGATGTGCCAACGAGGAGGCTAAGTCCCGAAGGGGGGTGGACACGAGGTGGTGTGCCAGTAAGGACGCTAGGCCTTGAAGGGGGATGGATTAGGGGAGAGTCCCACATCGGTTGGAGAAGGGAATGAGTGTCAACGTAGACGTTGGGCCCAAAGGGGGGTGGATTGTGAGATCCCACGTCGGTTGAGGAGGAGAATGAAGCATTCTTTAAAAAATGGTGTGTAAACCTCTTTTTAACAAACGCGTTTTATAAAAACCTTGAGGGGAAGCCCAAGGAGGACAATATCTGCTAGCGGTAGGCTTGGGCCGTTACAATATATCTCCAATATGGCTGACTAAATTTTGAAGGAAACGATTTTTATTTGTTTTTATCAATTTTGCCCCTCATCTTGTTTTAGATATTTCCTAAATCTTTGACATTAAATCTTGCTAGATTGTTGAGAGATTTGATTAGTTTATGTTTCTTAAACAAACATTTATTGAAGTTTTGATTTTAAGTGCTCCAATTCTGTTCTTCAATTAAATGAACCATTCTATGAATATTTGCATGTGCTATATGTCAGATTAGGAGCATGCCACCACTTGTCTTGTGAGATAGGCTATTTTAAAGCAGTGGCTTTAACATTTTTCCACCATAAATGATGACGCTCAAAGAGATGGTGCACATAGACCCTTCGACAGAAGTGTGAATGATGAAGACATAAAGGTACTTATCCATGTGAGTTAAAAAAAATTGTACAAATGATAGTTTACTTGGTTCCCCTTTCTATTATTTTTTTATGCATTCCCTCTGTTTACTTAAATATTTTTCCACATGTTTGTTTAAAAATAAAATTGTAACGGCCCAAACCTACTGCTAGTAGGTATTGTCCTCTTTGGGCTTTCTCTTTCAAGCTTCCGCTTAAGGTTTTTAAAACGCGTCTGCTAGGGAAAGGTTTCCACACCCTTATAAAGAATATTTTGTTCTCCTCTCCAACCAATGTGGGGATCTCACAATCTACCACCTTCGAGGCCCAGCGTCCTTGCTGGCACATCGCCTCATATCCACCCTCTTTCGAGGCTTAGCCTCCTTGTTGGCACATCACCCAGTGTCTAGTTCTGATATCATTTGTAATAGCCCAAGCCTACTGCTAGCAGATATTGTCTTCTTTCGGACTTCCCTTCAAGGTTTTTAAAACGCATCTGTCACCCTTCTAAAGAATGTTTTGTTCTCCTCCTCAACCGACATAGGATCTCACAATCCACCCCCCTTCAAGGCCTAGCGTCCTCGTTGACACTCGTTCCTTTCTCCAATCGATGTGGGACCTCCCAATCCACCCCCCCCCAGGCCCAGTGTCCTTGCTAGGCACACCACCTCGTATCCACCCCTTTTGGGGTTCAGCCACTTTGCTGGCACATTGTCTGGTGTCTGCCTCTAATATCATTTATATCAGCCTAAATATTGTCTTCTTTGGCCTTTCCCTTTCGAGCTTCCCCTCAAGACTTTTAAAATGCTAGAGAGAGGTTTCCACACCCTTATAAAGAATCTCACAAAAATGATATCCATTTTTTAAAACATATCCCCTTTTAAGGATGTCGATTGCTCCATGTTACAAGCAAATGATGTTAGTTTGAAGACTATTTGGGACATGAGATTTCAGCCATTTTTGTTGACTTAGATTTTTGTTGTGTGTGTTTAATATTCTTTGATTGTATATCTTGCTTGTTTTATTTTATTTCACATACATCACAAAGGCTCCTACCCAGGCTGTACCCAATATGATTAGAATCGAGCACGAAGCAATGTCGACCTTCAAAAAATGTATATTTTTGTGCAGGCACACTTAAAATCCTCACCGAGTTTGGTCATAGGATTGCGGTCGAGAAGCTTATGTTTTTGCGTGGATGAACGAAAAATCCTCATTCAATTTTGTTATATAATCATGTATGACTATGTGACCATTTTGTGAGCATTGTCATTTAGGACTTTAGAATTATCCTTACTTGTTTGGAGCTTTTATGCTATTG

mRNA sequence

TCTTGCTTTCTAGCGCTGATTCCATCTCTTTCTTTCTCGCATTCATGCTCTAAATTTCGTCGATTACTTTTAGAAACTAGGTCAAATTTGATTGGGGCAAAAATACTTGGGTGAATTCCTTAAAATTTTCCATAATTCGAGCGCTACAAAGGCACAGTTTCACCCTGAGTTTGAAAATTTGCCAGTTTAGCGGCAAAATTTCCCTGAATTCTCAATTCCCCCATAGCTAGAAAATTGTTGATGGTGAACCAGTCCAGCCATTTTCAACTCTGGGGTTGTAGTGGATTCCCCTTTCATCTTATTTCTGCAGTGAACGAACAATCTGCTAGGGATTGATTGATTGATTGATTTAGGACCATGTCTCGCGGTCATTCTCTATCCATTGCCATTTCGAGGGATTCATTATATGGATTCATTTCTCTGATTAGAAATGTTTCACGTCTATCTTTATTCAACATACCCTCATCATTTGGGCAGTCCTCATATCGAAGTTGTGAGTATCAAATAAGTAATTGTATATCGAAGTCTCTCCAGGAATCGACGTCTATACGCTATCCACCGGGCTTCTTTTTCGCTAAGCGATATAGTATGTGTGAGAGCCTTGGTGGGTTTGAAAAATGGCAATCTGTTAGGCATTTTAGCAATGGGGCTGTGGAGCTGAAGACAGACAGCAATATTGTCAGGTTTTCTTTTGGTGGGTCTTCTAGTACTAACGGTTCCCCACGGAAACAAAAGAAGGTGGCAAAAGCCAAATTGTCTAAGAAGGCCAAATTGAATGAACTCAGACTCTATCGTCTTAAGGCGAAAAAGAAGAAGACGTCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGGAAAGAAGCGTGGCTGATTGAGAAGTTGAGGAAATTCGAGGTTCCAAAATCTGTTCTTGAAAATTATGATCCTGAAATTCTTACTGAGGAGGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAAGAAGAACTTTATGCTGTTGGGGAGGCGAGGAGTCTTTGGTGGAGTTGTTCTTAATATGCATTTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAACCTGGGCAGGTTCATGAATATGCTGAAGAACTTGCTCGGTTGAGTAAAGGCATTGTGATTGATATTAAACCCAACAACAGCATAATCTTTTATCGGGGAAAGAACTATGTGCGGCCTGAAGTAATGTCGCCTTCAGATACGCTATCGAAAGACAAGGCCTTGGAAAAATACAAGTATGAACAATCACTTGAACATACAAGTCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTTCAGAAGCATCTTGCTCAGTTCAAGAGAAAGAAGGAAGAGGCTGCTTTAGAATTCATGATTAGGAGCATGCCACCACTTGTCTTACATAAAGGCACACTTAAAATCCTCACCGAGTTTGGTCATAGGATTGCGGTCGAGAAGCTTATGTTTTTGCGTGGATGAACGAAAAATCCTCATTCAATTTTGTTATATAATCATGTATGACTATGTGACCATTTTGTGAGCATTGTCATTTAGGACTTTAGAATTATCCTTACTTGTTTGGAGCTTTTATGCTATTG

Coding sequence (CDS)

ATGTCTCGCGGTCATTCTCTATCCATTGCCATTTCGAGGGATTCATTATATGGATTCATTTCTCTGATTAGAAATGTTTCACGTCTATCTTTATTCAACATACCCTCATCATTTGGGCAGTCCTCATATCGAAGTTGTGAGTATCAAATAAGTAATTGTATATCGAAGTCTCTCCAGGAATCGACGTCTATACGCTATCCACCGGGCTTCTTTTTCGCTAAGCGATATAGTATGTGTGAGAGCCTTGGTGGGTTTGAAAAATGGCAATCTGTTAGGCATTTTAGCAATGGGGCTGTGGAGCTGAAGACAGACAGCAATATTGTCAGGTTTTCTTTTGGTGGGTCTTCTAGTACTAACGGTTCCCCACGGAAACAAAAGAAGGTGGCAAAAGCCAAATTGTCTAAGAAGGCCAAATTGAATGAACTCAGACTCTATCGTCTTAAGGCGAAAAAGAAGAAGACGTCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGGAAAGAAGCGTGGCTGATTGAGAAGTTGAGGAAATTCGAGGTTCCAAAATCTGTTCTTGAAAATTATGATCCTGAAATTCTTACTGAGGAGGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAAGAAGAACTTTATGCTGTTGGGGAGGCGAGGAGTCTTTGGTGGAGTTGTTCTTAATATGCATTTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAACCTGGGCAGGTTCATGAATATGCTGAAGAACTTGCTCGGTTGAGTAAAGGCATTGTGATTGATATTAAACCCAACAACAGCATAATCTTTTATCGGGGAAAGAACTATGTGCGGCCTGAAGTAATGTCGCCTTCAGATACGCTATCGAAAGACAAGGCCTTGGAAAAATACAAGTATGAACAATCACTTGAACATACAAGTCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTTCAGAAGCATCTTGCTCAGTTCAAGAGAAAGAAGGAAGAGGCTGCTTTAGAATTCATGATTAGGAGCATGCCACCACTTGTCTTACATAAAGGCACACTTAAAATCCTCACCGAGTTTGGTCATAGGATTGCGGTCGAGAAGCTTATGTTTTTGCGTGGATGA

Protein sequence

MSRGHSLSIAISRDSLYGFISLIRNVSRLSLFNIPSSFGQSSYRSCEYQISNCISKSLQESTSIRYPPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVMSPSDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAALEFMIRSMPPLVLHKGTLKILTEFGHRIAVEKLMFLRG
Homology
BLAST of CmoCh19G002820 vs. ExPASy Swiss-Prot
Match: Q67XL4 (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.4e-39
Identity = 103/230 (44.78%), Postives = 147/230 (63.91%), Query Frame = 0

Query: 115 SSSTNGSPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEA 174
           SSS +G    + K  K K  K+A +  L+ +R K KK+      E +I   L KA++KE 
Sbjct: 95  SSSQDGDSCTKLKRKKLK-GKRAVVRWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEE 154

Query: 175 WLIEKLRKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHL 234
            L+E ++K E  +S    +DPEILT EE  Y  + G K KN++ +GRRG++ GV+LNMHL
Sbjct: 155 RLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHL 214

Query: 235 HWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRP--EVM 294
           HWKKH+T++V+ K   P +V E A ELARL+ GIV+D+   N+II YRGKNYV+P  E+M
Sbjct: 215 HWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIM 274

Query: 295 SPSDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKE 343
           SP  TL + KAL+K K   +L    ++I +LE+EL+  Q   AQ + K++
Sbjct: 275 SPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQ---AQAETKRD 320

BLAST of CmoCh19G002820 vs. ExPASy Swiss-Prot
Match: Q9LT57 (CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM9 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.3e-34
Identity = 89/214 (41.59%), Postives = 137/214 (64.02%), Query Frame = 0

Query: 114 GSSSTNGSPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE 173
           G S++ G   + K  ++ +      L E+R  R K  KKK   + E R+ Y+L++AK+K 
Sbjct: 11  GMSTSRGRSMRSKVESRMRKESGKTLREIR--RAKKLKKKLMTDEE-RLIYNLKRAKKKV 70

Query: 174 AWLIEKLRKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMH 233
           A L++KL+K+++P+     +DPE+ T E+    K+ G K KN++ +G RGVFGGVV NMH
Sbjct: 71  ALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMH 130

Query: 234 LHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVMS 293
           +HWK HETV+V C      ++ E A  +ARLS G+VI+I    +II +RG+NY +P+ + 
Sbjct: 131 MHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLI 190

Query: 294 PSDTLSKDKALEKYKYEQSLEHTSQFIEKLEKEL 328
           P +TL+K KAL K ++EQ+LE     I+K E++L
Sbjct: 191 PVNTLTKRKALFKARFEQALESQKLNIKKTEQQL 221

BLAST of CmoCh19G002820 vs. ExPASy Swiss-Prot
Match: Q8L7C2 (CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CFM2 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.9e-20
Identity = 75/235 (31.91%), Postives = 123/235 (52.34%), Query Frame = 0

Query: 111 SFGGSSSTNGSPRKQKKVAKAKLSKKAK--LNELRLYRLKAKKKKTS----PNPEVRIRY 170
           S  G+  T      + +  K  +  +AK   + ++ +++K++++ +         +++  
Sbjct: 489 SVHGNKLTENEEEIKPRAVKEDIELEAKDQKDHIQTHQMKSRQRNSPEAILEKTSMKLSM 548

Query: 171 SLEKAKRKEAWLIEKLRKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGV 230
           +LEK    E  L + L   E P+  L + D E +T +EK+ L++ G K K F+LLGRRGV
Sbjct: 549 ALEKKANAEKVLAD-LENRESPQ--LSDIDKEGITNDEKYMLRKIGLKMKPFLLLGRRGV 608

Query: 231 FGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIK---PNNSIIFY 290
           F G + NMHLHWK  E VK+IC        H+ AE L   S GI++ ++      +II Y
Sbjct: 609 FDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVY 668

Query: 291 RGKNYVRPEVMSPSDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQ 337
           RGKNY RP+ + P   LSK +AL++    Q  +     + KL   +E+  + L +
Sbjct: 669 RGKNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVE 720

BLAST of CmoCh19G002820 vs. ExPASy Swiss-Prot
Match: Q2R1U8 (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=CFM3 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.9e-20
Identity = 67/191 (35.08%), Postives = 100/191 (52.36%), Query Frame = 0

Query: 161 RIRYSLEKAKRKEAWLIEKLRKFEVPKSVLENYD-PEILTEEEKHYLKRTGEKKKNFMLL 220
           ++ + L+ A++K       L K E      E    PE +T+EE+   ++ G + K F+LL
Sbjct: 554 KLEWKLQLAQKKIEKAERVLGKVETALKPTEGIQPPETITDEERFMFRKLGLRMKAFLLL 613

Query: 221 GRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVID---IKPNN 280
           GRRGVF G + NMHLHWK  E VK++ K    G V + A  L   S GI++    +    
Sbjct: 614 GRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVDKVSKGY 673

Query: 281 SIIFYRGKNYVRPEVMSPSDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQ 340
           +I+ +RGK+Y RP  + P + LSK KAL +    Q  E  S  I  L + ++  +  L Q
Sbjct: 674 AIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQRREALSHHIATLNRRVKKLKAELLQ 733

Query: 341 FKRKKEEAALE 348
            +  KEE  +E
Sbjct: 734 MEGVKEEGDVE 744

BLAST of CmoCh19G002820 vs. ExPASy Swiss-Prot
Match: A7XN92 (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays OX=4577 GN=CFM3 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.8e-19
Identity = 64/187 (34.22%), Postives = 99/187 (52.94%), Query Frame = 0

Query: 161 RIRYSLEKAKRKEAWLIEKLRKFEVP-KSVLENYDPEILTEEEKHYLKRTGEKKKNFMLL 220
           ++ + L  A++K       L K E   +   ++  PE +T+EE+   ++ G + K F+LL
Sbjct: 546 KLEWKLSLAQKKMEKAERVLGKVETALRPTEDSRPPETITDEERFMFRKLGLRMKAFLLL 605

Query: 221 GRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVID---IKPNN 280
           GRRGVF G + NMHLHWK  E VK++ K      V   A  L   S GI++    +    
Sbjct: 606 GRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRIALSLEAESGGILVSVDKVSKGY 665

Query: 281 SIIFYRGKNYVRPEVMSPSDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQ 340
           +I+ +RGKNY RP  + P + LSK KAL +    Q  +  S+   KL +++E  +  L Q
Sbjct: 666 AIVVFRGKNYRRPSSLRPRNLLSKRKALARSIELQRHQALSRHFAKLNRKVERLKAELVQ 725

Query: 341 FKRKKEE 344
            +  KE+
Sbjct: 726 MEDVKEQ 732

BLAST of CmoCh19G002820 vs. ExPASy TrEMBL
Match: A0A6J1HK68 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463795 PE=4 SV=1)

HSP 1 Score: 680.2 bits (1754), Expect = 4.8e-192
Identity = 350/352 (99.43%), Postives = 351/352 (99.72%), Query Frame = 0

Query: 1   MSRGHSLSIAISRDSLYGFISLIRNVSRLSLFNIPSSFGQSSYRSCEYQISNCISKSLQE 60
           MSRGHSLSIAISRDSLYGFISLIRNVSRLSLFNIPSSFGQSSYRSCEYQISNCISKSLQE
Sbjct: 1   MSRGHSLSIAISRDSLYGFISLIRNVSRLSLFNIPSSFGQSSYRSCEYQISNCISKSLQE 60

Query: 61  STSIRYPPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNG 120
           STSIRYPPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNG
Sbjct: 61  STSIRYPPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNG 120

Query: 121 SPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL 180
           SPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL
Sbjct: 121 SPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL 180

Query: 181 RKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHLHWKKHE 240
           RKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHLHWKKHE
Sbjct: 181 RKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHLHWKKHE 240

Query: 241 TVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVMSPSDTLSK 300
           TVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVMSPSDTLSK
Sbjct: 241 TVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVMSPSDTLSK 300

Query: 301 DKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAALEFMIRS 353
           DKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAALEFM+ S
Sbjct: 301 DKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAALEFMVNS 352

BLAST of CmoCh19G002820 vs. ExPASy TrEMBL
Match: A0A6J1HVJ0 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467053 PE=4 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 4.7e-187
Identity = 338/352 (96.02%), Postives = 347/352 (98.58%), Query Frame = 0

Query: 1   MSRGHSLSIAISRDSLYGFISLIRNVSRLSLFNIPSSFGQSSYRSCEYQISNCISKSLQE 60
           MSRGH+LSIAISRDSLYGFISLIRNVSRLSLFNIP+SFGQSSY SCE+QISNCISKSLQE
Sbjct: 1   MSRGHALSIAISRDSLYGFISLIRNVSRLSLFNIPTSFGQSSYESCEHQISNCISKSLQE 60

Query: 61  STSIRYPPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNG 120
           STSIRYPPGFFF KRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNG
Sbjct: 61  STSIRYPPGFFFTKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNG 120

Query: 121 SPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL 180
           SPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL
Sbjct: 121 SPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL 180

Query: 181 RKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHLHWKKHE 240
           RKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNF+LLGRRGVFGGVVLNMHLHWKKHE
Sbjct: 181 RKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHE 240

Query: 241 TVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVMSPSDTLSK 300
           TVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSI+FYRGKNYV+PEVMSP DTLSK
Sbjct: 241 TVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVQPEVMSPPDTLSK 300

Query: 301 DKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAALEFMIRS 353
           DKALEKYKYEQSLEHTSQF+EKLEKELEDF KHLAQFKRKKEEAA+EFM+ S
Sbjct: 301 DKALEKYKYEQSLEHTSQFVEKLEKELEDFHKHLAQFKRKKEEAAVEFMVNS 352

BLAST of CmoCh19G002820 vs. ExPASy TrEMBL
Match: A0A6J1CKB1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012231 PE=4 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 4.1e-159
Identity = 295/350 (84.29%), Postives = 318/350 (90.86%), Query Frame = 0

Query: 1   MSRGHSLSIAISRDSLYGFISLIRNVSRLSLFNIPSSFGQSSYRSCEYQISNCISKSLQE 60
           M RG +LS A++R+SL GFISLIRNVSR SL NIP+SFGQS Y SCE+Q SN I   LQE
Sbjct: 1   MPRGRNLSNAVTRNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQE 60

Query: 61  STSIRYPPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNG 120
           STSI +PPGF F++RY++ E LGGF+KWQS RHF + AVELKTDSNIVRFSFG  S TNG
Sbjct: 61  STSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRSVAVELKTDSNIVRFSFGRPSVTNG 120

Query: 121 SPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL 180
           SP KQKKVAK KLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL
Sbjct: 121 SPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL 180

Query: 181 RKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHLHWKKHE 240
           RKFEV K V+E YDPEILTEEEKH+LKRTGEKKKNF+LLGRRGVFGGVVLNMHLHWKKHE
Sbjct: 181 RKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHE 240

Query: 241 TVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVMSPSDTLSK 300
           TVKVICKPCKPGQVHEYAEEL RLSKGIV+DIKPNN+IIFYRGKNYV+PEVMSP DTLSK
Sbjct: 241 TVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSK 300

Query: 301 DKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAALEFMI 351
           DKA+EKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKE+A +E M+
Sbjct: 301 DKAMEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV 350

BLAST of CmoCh19G002820 vs. ExPASy TrEMBL
Match: A0A0A0K5Y2 (CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G062730 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 4.4e-153
Identity = 291/350 (83.14%), Postives = 312/350 (89.14%), Query Frame = 0

Query: 3   RGHSLSIAISRDSLYGFISLIRNVSRLSLFNIPSSFGQSSYRSCEYQISNCISKSLQEST 62
           RG S+ IA SR SL+GFI LIRNVS LSL +IP+SF QSS+ S E+Q S+CI KSL ES 
Sbjct: 5   RGLSI-IAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLNESM 64

Query: 63  SIRYPPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSP 122
           S   PPGF F +RYSM ES GGF++WQSVRHFSN  VELKTD+N VRFSFG  SSTNGS 
Sbjct: 65  SRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTNGSR 124

Query: 123 RKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRK 182
            KQ KVAK K+SKKAKLNELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRK
Sbjct: 125 LKQ-KVAKTKMSKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRK 184

Query: 183 FEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHLHWKKHETV 242
           FE+PK  +E YDPEILTEEEKHYLKRTGEKKKNF+LLGRRGVFGGVVLNMH+HWKKHETV
Sbjct: 185 FEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETV 244

Query: 243 KVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVMSPSDTLSKDK 302
           KVICKPCKPGQVHEYAEEL RLSKGIVIDIKPNNSIIFYRGKNYV+PEVMSP +TLSKDK
Sbjct: 245 KVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLSKDK 304

Query: 303 ALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAALEFMIRS 353
           ALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKR+KE+AALE M+ S
Sbjct: 305 ALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALESMVNS 352

BLAST of CmoCh19G002820 vs. ExPASy TrEMBL
Match: A0A1S3C151 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495436 PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 1.3e-152
Identity = 289/342 (84.50%), Postives = 308/342 (90.06%), Query Frame = 0

Query: 3   RGHSLSIAISRDSLYGFISLIRNVSRLSLFNIPSSFGQSSYRSCEYQISNCISKSLQEST 62
           RG S+ I ISR SL+GF SLIRN S LSL ++P+SFGQSS+ SCE+Q S+ I KSL EST
Sbjct: 5   RGQSI-ITISRGSLFGFTSLIRNASPLSLLSVPTSFGQSSHGSCEHQASSRIVKSLNEST 64

Query: 63  SIRYPPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSP 122
           S   PPG     RYSM ES GGF++WQSVRHFSN  VELKTDSN VRFSF G SSTNGS 
Sbjct: 65  SRDCPPGSSLTWRYSMWESYGGFKRWQSVRHFSNAVVELKTDSNTVRFSF-GPSSTNGSQ 124

Query: 123 RKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRK 182
            KQKKVAK KLSKK KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRK
Sbjct: 125 LKQKKVAKTKLSKKDKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRK 184

Query: 183 FEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHLHWKKHETV 242
           FE+PKSV+E YDPEILTEEEKHYLKRTGEKKKNF+LLGRRGVFGGVVLNMH+HWKKHETV
Sbjct: 185 FEIPKSVVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETV 244

Query: 243 KVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVMSPSDTLSKDK 302
           KVICKPCKPGQVHEYAEEL+RLSKGIVIDIKPNNSIIFYRGKNYV+PEVMSP DTLSKDK
Sbjct: 245 KVICKPCKPGQVHEYAEELSRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDK 304

Query: 303 ALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEA 345
           ALEKY+YEQSLEHTSQFIEKLEKELEDFQKHLAQFKR+KE+A
Sbjct: 305 ALEKYRYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA 344

BLAST of CmoCh19G002820 vs. TAIR 10
Match: AT4G13070.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 390.2 bits (1001), Expect = 1.9e-108
Identity = 214/343 (62.39%), Postives = 259/343 (75.51%), Query Frame = 0

Query: 7   LSIAISRDSLYGFISLIRNVSRLSLFNIPSSFGQSSYRSCEYQISNCISKSLQESTSIRY 66
           L++  +++    F+   +  SR  L +  SS   S  +S  +    C S S   S + R+
Sbjct: 2   LALGYAKEIAQRFLRNPKWTSRFFLLHYQSSNYSSYVKSRPFLQVQCKSASFDVSQAQRW 61

Query: 67  PPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGS---PR 126
                         +L  ++   S R+ SN  +EL+TD N+VRF+F   SS+  +    R
Sbjct: 62  --------------NLFAYDGLFSRRYLSNSTIELRTDDNVVRFAFNNVSSSGNNVVPTR 121

Query: 127 KQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKF 186
           K+KK  +AKLS+KAK+NELR YRLKAKKK  SPNPEVRIRY LEKAKRKE WLIEKLRK+
Sbjct: 122 KEKKWKRAKLSRKAKVNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKEEWLIEKLRKY 181

Query: 187 EVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHLHWKKHETVK 246
           +VPKS  E YDPE LTEEE+HYLKRTGEK+KNF+L+GRRGVFGGVVLN+HLHWKKHETVK
Sbjct: 182 DVPKSPAEPYDPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVK 241

Query: 247 VICKPC-KPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVMSPSDTLSKDK 306
           VICKPC KPGQVHEYAEELARLSKGIVID+KPNN+I+ YRGKNYVRPEVMSP DTLSKDK
Sbjct: 242 VICKPCNKPGQVHEYAEELARLSKGIVIDVKPNNTIVLYRGKNYVRPEVMSPVDTLSKDK 301

Query: 307 ALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAA 346
           ALEKY+YEQSLEHTS+FIEKLEKELE++ K++A+ K+KK+E A
Sbjct: 302 ALEKYRYEQSLEHTSEFIEKLEKELEEYHKYVARHKKKKDEEA 330

BLAST of CmoCh19G002820 vs. TAIR 10
Match: AT2G28480.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 213.4 bits (542), Expect = 3.2e-55
Identity = 123/225 (54.67%), Postives = 155/225 (68.89%), Query Frame = 0

Query: 122 PRKQKKVAKAKLSKKAK--------LNELRLYRLKAK-KKKTSPNPEVRIRYSLEKAKRK 181
           P+K K + K +L  K K         N     RL  K KKK   N E RI+Y LEKAK K
Sbjct: 79  PKKYKWLTKKRLKLKRKKEREERNAANRKDPRRLTVKGKKKKFVNAEERIKYKLEKAKIK 138

Query: 182 EAWLIEKLRKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNM 241
           EA LIE+L+++EV K       P  +T EE+ YLK+ G+K+ N++ +GRRGVFGGV+LNM
Sbjct: 139 EALLIERLKRYEVAKVQGPEVRPHEITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNM 198

Query: 242 HLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVM 301
           HLHWKKHETVKVIC   KPGQV +YAEELA+LS G+ ++I  +++IIFYRGK YV+P+VM
Sbjct: 199 HLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDTIIFYRGKGYVQPQVM 258

Query: 302 SPSDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQF 338
           SP DTLSK +A EK KYEQSLE    FI   EKELE + +H+A +
Sbjct: 259 SPIDTLSKKRAYEKSKYEQSLESVRHFIAIAEKELELYYRHVALY 303

BLAST of CmoCh19G002820 vs. TAIR 10
Match: AT3G25440.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 165.2 bits (417), Expect = 1.0e-40
Identity = 103/230 (44.78%), Postives = 147/230 (63.91%), Query Frame = 0

Query: 115 SSSTNGSPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEA 174
           SSS +G    + K  K K  K+A +  L+ +R K KK+      E +I   L KA++KE 
Sbjct: 95  SSSQDGDSCTKLKRKKLK-GKRAVVRWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEE 154

Query: 175 WLIEKLRKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHL 234
            L+E ++K E  +S    +DPEILT EE  Y  + G K KN++ +GRRG++ GV+LNMHL
Sbjct: 155 RLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHL 214

Query: 235 HWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRP--EVM 294
           HWKKH+T++V+ K   P +V E A ELARL+ GIV+D+   N+II YRGKNYV+P  E+M
Sbjct: 215 HWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIM 274

Query: 295 SPSDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKE 343
           SP  TL + KAL+K K   +L    ++I +LE+EL+  Q   AQ + K++
Sbjct: 275 SPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQ---AQAETKRD 320

BLAST of CmoCh19G002820 vs. TAIR 10
Match: AT3G25440.2 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 165.2 bits (417), Expect = 1.0e-40
Identity = 103/230 (44.78%), Postives = 147/230 (63.91%), Query Frame = 0

Query: 115 SSSTNGSPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEA 174
           SSS +G    + K  K K  K+A +  L+ +R K KK+      E +I   L KA++KE 
Sbjct: 31  SSSQDGDSCTKLKRKKLK-GKRAVVRWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEE 90

Query: 175 WLIEKLRKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHL 234
            L+E ++K E  +S    +DPEILT EE  Y  + G K KN++ +GRRG++ GV+LNMHL
Sbjct: 91  RLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHL 150

Query: 235 HWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRP--EVM 294
           HWKKH+T++V+ K   P +V E A ELARL+ GIV+D+   N+II YRGKNYV+P  E+M
Sbjct: 151 HWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIM 210

Query: 295 SPSDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKE 343
           SP  TL + KAL+K K   +L    ++I +LE+EL+  Q   AQ + K++
Sbjct: 211 SPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQ---AQAETKRD 256

BLAST of CmoCh19G002820 vs. TAIR 10
Match: AT3G27550.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 147.9 bits (372), Expect = 1.7e-35
Identity = 89/214 (41.59%), Postives = 137/214 (64.02%), Query Frame = 0

Query: 114 GSSSTNGSPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE 173
           G S++ G   + K  ++ +      L E+R  R K  KKK   + E R+ Y+L++AK+K 
Sbjct: 11  GMSTSRGRSMRSKVESRMRKESGKTLREIR--RAKKLKKKLMTDEE-RLIYNLKRAKKKV 70

Query: 174 AWLIEKLRKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMH 233
           A L++KL+K+++P+     +DPE+ T E+    K+ G K KN++ +G RGVFGGVV NMH
Sbjct: 71  ALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMH 130

Query: 234 LHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVMS 293
           +HWK HETV+V C      ++ E A  +ARLS G+VI+I    +II +RG+NY +P+ + 
Sbjct: 131 MHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLI 190

Query: 294 PSDTLSKDKALEKYKYEQSLEHTSQFIEKLEKEL 328
           P +TL+K KAL K ++EQ+LE     I+K E++L
Sbjct: 191 PVNTLTKRKALFKARFEQALESQKLNIKKTEQQL 221

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q67XL41.4e-3944.78Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabid... [more]
Q9LT572.3e-3441.59CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
Q8L7C21.9e-2031.91CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
Q2R1U81.9e-2035.08CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa s... [more]
A7XN922.8e-1934.22CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays OX=45... [more]
Match NameE-valueIdentityDescription
A0A6J1HK684.8e-19299.43uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurb... [more]
A0A6J1HVJ04.7e-18796.02uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurb... [more]
A0A6J1CKB14.1e-15984.29uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Momord... [more]
A0A0A0K5Y24.4e-15383.14CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G062730 PE=4 SV... [more]
A0A1S3C1511.3e-15284.50uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucumi... [more]
Match NameE-valueIdentityDescription
AT4G13070.11.9e-10862.39RNA-binding CRS1 / YhbY (CRM) domain protein [more]
AT2G28480.13.2e-5554.67RNA-binding CRS1 / YhbY (CRM) domain protein [more]
AT3G25440.11.0e-4044.78RNA-binding CRS1 / YhbY (CRM) domain protein [more]
AT3G25440.21.0e-4044.78RNA-binding CRS1 / YhbY (CRM) domain protein [more]
AT3G27550.11.7e-3541.59RNA-binding CRS1 / YhbY (CRM) domain protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 313..347
NoneNo IPR availablePANTHERPTHR31426:SF3OS06G0304500 PROTEINcoord: 79..345
IPR001890RNA-binding, CRM domainSMARTSM01103CRS1_YhbY_2coord: 198..282
e-value: 1.7E-20
score: 84.1
IPR001890RNA-binding, CRM domainPFAMPF01985CRS1_YhbYcoord: 198..282
e-value: 1.8E-18
score: 66.5
IPR001890RNA-binding, CRM domainPROSITEPS51295CRMcoord: 196..293
score: 19.578886
IPR035920YhbY-like superfamilyGENE3D3.30.110.60coord: 197..296
e-value: 4.9E-22
score: 79.8
IPR035920YhbY-like superfamilySUPERFAMILY75471YhbY-likecoord: 197..292
IPR040286CRM domain-containing protein At3g25440-likePANTHERPTHR31426GROUP II INTRON SPLICING FACTOR CRS1-LIKEcoord: 79..345

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G002820.1CmoCh19G002820.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding