CmoCh18G013100 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh18G013100
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr18: 12522338 .. 12524971 (-)
RNA-Seq ExpressionCmoCh18G013100
SyntenyCmoCh18G013100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTATGTAGAACAGTACCCAAGTTTGTCAATATAAATGAACTCTACCGTCTGGAAGAAGGCTGCTCTCAGCTCATTTCAATCTGCAATTCCAAATCCTTAAAAGAGGGCCTCTGTGTTCATAGCCCGATTATCAAGCTCGGTCTTCTTGGTAATTTGTATCTCAGCAATAATTTGCTATCTCTTTATGCAAAACGCTTTGGACTCAAACAAGCACGTAACCTGTTCGATGAAATGCCTGACAGAGATGTGGTGTCCTGGACTACAATGCAGGCTGCTTATGTTAGGCACGGAAACTACAATGATGCTTTTGAATTGTTTGATCTGATGACAACATTGGGAAATTCTCCAAATGAGTTCACGCTTTCAACTTTGATCCGATCGTGCTCCGAAACTAGAGAGTTGAAGCTTGGAAGTTGCGTCCATGGCTATGCCATCAAGGGTGGCTTTGAGTCAAAGCCAGTTCTGGGCTGCACCTTGATTGATTTGTATGCAAAGTGTGATTGTACTAAGGAAGCTTATGAAACTTTTAGGAACATGGATGATGCCGATACCGTTACTTGGACGACGATGATTTCTTCGTTAGTGCAAGCACAGAAATGGGCTGAGGCTCTCCAATTATACATCACCATGTTAGAGTCTGGGGTGGCTCCTAATGAGTTCACCTTTACCAAACTTTTAGCAACGACGAGTTTTATGGGTTTGAAATATGGGAAGTTACTCCATAGTCATTTGATATCATTGGGAGTCAATCTGAATGTCGTTCTAAAGACGGCCCTCGTCGATATGTACTCTGGATACCAAGAGTTAGAATATGCTACGAAGGTAGCAAATCAAACGCCTGAGAAAGATGTGTTTTTGTGGACATCTATTATCTCCTGCTTCAATCAAAATTCAAAGGTCAAGGAGGCTATTGCCGCATTTCTAGAGATGAGGATGTCTGGGATTCCACCCCACAGTTTCACATATTCCAGTGCTTTAAGTGCCTGCACATTGCTACCATCACTTGAATTAGGCAAGCAAATCCACTTGCAGGTAATCTTGGCTGGTTTGGAGGCTGATGTTTGTGCTGGGAGTGCACTAATTAATATGTACATGAAATCTGACTTGATAGATGATGCCTTGAGAGTGTTCGGGTCGATAGCTACCCCGAGTGTTATTTGTTGGACTTCTTTAATATCTGGTCTTGCTGAGCATGGTTTTGAACAAGATTGTTATAGATATTTTCTAGATATGCAAGCAGCCGGAGTGCAGCCGAATTCCTTCACTCTTTCTAGCATTCTTGGCGCCTGCAAAAATCAAATATCCATGTTCCATGGATATATACTAAAATCGATGGCTTACCACGATATCGTTGTAGGGAACGCTCTTGTGGATGCGTATGCTCGATCCGGGATGGTGGATGATGCTCGGCGAGTGATTAGAACTATGAAGCATCGGGATCCCATCACTTATACTAGCTTAGCCACGAGATTGAATCAAATGGGTGATCATGAAATGGCACTAAAAACCATTGATTCCATGCGTGCTGACAATGTCAAGATGGATGAAATTAGCTTGGCAAGCTTGGTATCTGCAGCAACTGGGGTAGGCACAATTGAAGCTGGGAAACAACTTCACTGCTATTCTTTGAGATATGGCTTAGACAATACGCGTTCAGTTAAAAATAGTTTGGTGGACTTTTATGGCAAGGTTGGATGCTTGAAGGATGCCTGCAAAGCTTTTGAAGAAATAACAGAGCCCGACGTTGTTTCTTGGAATGGATTGATATCTATATTAGCGCTCAACGGGCATATCTCCGCCGCGCTCTCTGCCTTCGATAACATGAGGTTAGCTGGTTTGAAGCCTGATTCTATCACATTGCTATCAGTACTTTCAGCTTGCAGTCAAGGTGGTTTGGTTGATTTTGGCATGCATTATTTCCAAACTATGAGAGAAACTCACAATATAGAACCGGCGTTGGATCATTATGTTTGTGTTATTGATCTCCATGGCCGCGCTGGGCAGCTAGAGAAGGCAATGGAAATTGTGGAAGGCATGCCATTTGAGGCAGATGCCAAGGTCTACAAGACATTGTTAAGCGCCTGCAAATTGCATAGGAACGTGCTGCTTGGAGAAGATGTGGCAAGAAGAGGACTTCAACTTGACCCATATGATTCATCTTTCTATTTGTTACTGGCTAGCTTGTACGATGAACTCGACCGACCCGATTTAAGCACGAAAACTCGTAAGCTAATGCGAGATCGTGGAATGAGAAAGAGTCCTAGCCAGAGCTGGGTAGAATTAAGCGGTAAGATTCATGTCTTCATCACAGGAGATAGATCACACCCTGAGATGAATGATATGGAAGAAAAGTTAGAGTTCCTGAGAGCGGAGTTCAAGAGTAGGGGCTTTTTGTATGGTGACGATGAAGATTCATGTCATCATAGTGAAAAATTAGCTCTTGCATTTGGTCTCGTCAGTATGCCTCCAAAAGGTGTTGTACGTATAATGAAGAACATAAGCATTTGCAGAGAATGTCATGACTTCATATTGCTTGCAACAAAGGTAGTAGAGAGGGAAATTGTTGTGAGAGATGGGAGCAGACTCCATGTGTTCAACAATGGAAGCTGCTCTTGCAAGCGCTACCCATGA

mRNA sequence

ATGCTATGTAGAACAGTACCCAAGTTTGTCAATATAAATGAACTCTACCGTCTGGAAGAAGGCTGCTCTCAGCTCATTTCAATCTGCAATTCCAAATCCTTAAAAGAGGGCCTCTGTGTTCATAGCCCGATTATCAAGCTCGGTCTTCTTGGTAATTTGTATCTCAGCAATAATTTGCTATCTCTTTATGCAAAACGCTTTGGACTCAAACAAGCACGTAACCTGTTCGATGAAATGCCTGACAGAGATGTGGTGTCCTGGACTACAATGCAGGCTGCTTATGTTAGGCACGGAAACTACAATGATGCTTTTGAATTGTTTGATCTGATGACAACATTGGGAAATTCTCCAAATGAGTTCACGCTTTCAACTTTGATCCGATCGTGCTCCGAAACTAGAGAGTTGAAGCTTGGAAGTTGCGTCCATGGCTATGCCATCAAGGGTGGCTTTGAGTCAAAGCCAGTTCTGGGCTGCACCTTGATTGATTTGTATGCAAAGTGTGATTGTACTAAGGAAGCTTATGAAACTTTTAGGAACATGGATGATGCCGATACCGTTACTTGGACGACGATGATTTCTTCGTTAGTGCAAGCACAGAAATGGGCTGAGGCTCTCCAATTATACATCACCATGTTAGAGTCTGGGGTGGCTCCTAATGAGTTCACCTTTACCAAACTTTTAGCAACGACGAGTTTTATGGGTTTGAAATATGGGAAGTTACTCCATAGTCATTTGATATCATTGGGAGTCAATCTGAATGTCGTTCTAAAGACGGCCCTCGTCGATATGTACTCTGGATACCAAGAGTTAGAATATGCTACGAAGGTAGCAAATCAAACGCCTGAGAAAGATGTGTTTTTGTGGACATCTATTATCTCCTGCTTCAATCAAAATTCAAAGGTCAAGGAGGCTATTGCCGCATTTCTAGAGATGAGGATGTCTGGGATTCCACCCCACAGTTTCACATATTCCAGTGCTTTAAGTGCCTGCACATTGCTACCATCACTTGAATTAGGCAAGCAAATCCACTTGCAGGTAATCTTGGCTGGTTTGGAGGCTGATGTTTGTGCTGGGAGTGCACTAATTAATATGTACATGAAATCTGACTTGATAGATGATGCCTTGAGAGTGTTCGGGTCGATAGCTACCCCGAGTGTTATTTGTTGGACTTCTTTAATATCTGGTCTTGCTGAGCATGGTTTTGAACAAGATTGTTATAGATATTTTCTAGATATGCAAGCAGCCGGAGTGCAGCCGAATTCCTTCACTCTTTCTAGCATTCTTGGCGCCTGCAAAAATCAAATATCCATGTTCCATGGATATATACTAAAATCGATGGCTTACCACGATATCGTTGTAGGGAACGCTCTTGTGGATGCGTATGCTCGATCCGGGATGGTGGATGATGCTCGGCGAGTGATTAGAACTATGAAGCATCGGGATCCCATCACTTATACTAGCTTAGCCACGAGATTGAATCAAATGGGTGATCATGAAATGGCACTAAAAACCATTGATTCCATGCGTGCTGACAATGTCAAGATGGATGAAATTAGCTTGGCAAGCTTGGTATCTGCAGCAACTGGGGTAGGCACAATTGAAGCTGGGAAACAACTTCACTGCTATTCTTTGAGATATGGCTTAGACAATACGCGTTCAGTTAAAAATAGTTTGGTGGACTTTTATGGCAAGGTTGGATGCTTGAAGGATGCCTGCAAAGCTTTTGAAGAAATAACAGAGCCCGACGTTGTTTCTTGGAATGGATTGATATCTATATTAGCGCTCAACGGGCATATCTCCGCCGCGCTCTCTGCCTTCGATAACATGAGGTTAGCTGGTTTGAAGCCTGATTCTATCACATTGCTATCAGTACTTTCAGCTTGCAGTCAAGGTGGTTTGGTTGATTTTGGCATGCATTATTTCCAAACTATGAGAGAAACTCACAATATAGAACCGGCGTTGGATCATTATGTTTGTGTTATTGATCTCCATGGCCGCGCTGGGCAGCTAGAGAAGGCAATGGAAATTGTGGAAGGCATGCCATTTGAGGCAGATGCCAAGGTCTACAAGACATTGTTAAGCGCCTGCAAATTGCATAGGAACGTGCTGCTTGGAGAAGATGTGGCAAGAAGAGGACTTCAACTTGACCCATATGATTCATCTTTCTATTTGTTACTGGCTAGCTTGTACGATGAACTCGACCGACCCGATTTAAGCACGAAAACTCGTAAGCTAATGCGAGATCGTGGAATGAGAAAGAGTCCTAGCCAGAGCTGGGTAGAATTAAGCGGTAAGATTCATGTCTTCATCACAGGAGATAGATCACACCCTGAGATGAATGATATGGAAGAAAAGTTAGAGTTCCTGAGAGCGGAGTTCAAGAGTAGGGGCTTTTTGTATGGTGACGATGAAGATTCATGTCATCATAGTGAAAAATTAGCTCTTGCATTTGGTCTCGTCAGTATGCCTCCAAAAGGTGTTGTACGTATAATGAAGAACATAAGCATTTGCAGAGAATGTCATGACTTCATATTGCTTGCAACAAAGGTAGTAGAGAGGGAAATTGTTGTGAGAGATGGGAGCAGACTCCATGTGTTCAACAATGGAAGCTGCTCTTGCAAGCGCTACCCATGA

Coding sequence (CDS)

ATGCTATGTAGAACAGTACCCAAGTTTGTCAATATAAATGAACTCTACCGTCTGGAAGAAGGCTGCTCTCAGCTCATTTCAATCTGCAATTCCAAATCCTTAAAAGAGGGCCTCTGTGTTCATAGCCCGATTATCAAGCTCGGTCTTCTTGGTAATTTGTATCTCAGCAATAATTTGCTATCTCTTTATGCAAAACGCTTTGGACTCAAACAAGCACGTAACCTGTTCGATGAAATGCCTGACAGAGATGTGGTGTCCTGGACTACAATGCAGGCTGCTTATGTTAGGCACGGAAACTACAATGATGCTTTTGAATTGTTTGATCTGATGACAACATTGGGAAATTCTCCAAATGAGTTCACGCTTTCAACTTTGATCCGATCGTGCTCCGAAACTAGAGAGTTGAAGCTTGGAAGTTGCGTCCATGGCTATGCCATCAAGGGTGGCTTTGAGTCAAAGCCAGTTCTGGGCTGCACCTTGATTGATTTGTATGCAAAGTGTGATTGTACTAAGGAAGCTTATGAAACTTTTAGGAACATGGATGATGCCGATACCGTTACTTGGACGACGATGATTTCTTCGTTAGTGCAAGCACAGAAATGGGCTGAGGCTCTCCAATTATACATCACCATGTTAGAGTCTGGGGTGGCTCCTAATGAGTTCACCTTTACCAAACTTTTAGCAACGACGAGTTTTATGGGTTTGAAATATGGGAAGTTACTCCATAGTCATTTGATATCATTGGGAGTCAATCTGAATGTCGTTCTAAAGACGGCCCTCGTCGATATGTACTCTGGATACCAAGAGTTAGAATATGCTACGAAGGTAGCAAATCAAACGCCTGAGAAAGATGTGTTTTTGTGGACATCTATTATCTCCTGCTTCAATCAAAATTCAAAGGTCAAGGAGGCTATTGCCGCATTTCTAGAGATGAGGATGTCTGGGATTCCACCCCACAGTTTCACATATTCCAGTGCTTTAAGTGCCTGCACATTGCTACCATCACTTGAATTAGGCAAGCAAATCCACTTGCAGGTAATCTTGGCTGGTTTGGAGGCTGATGTTTGTGCTGGGAGTGCACTAATTAATATGTACATGAAATCTGACTTGATAGATGATGCCTTGAGAGTGTTCGGGTCGATAGCTACCCCGAGTGTTATTTGTTGGACTTCTTTAATATCTGGTCTTGCTGAGCATGGTTTTGAACAAGATTGTTATAGATATTTTCTAGATATGCAAGCAGCCGGAGTGCAGCCGAATTCCTTCACTCTTTCTAGCATTCTTGGCGCCTGCAAAAATCAAATATCCATGTTCCATGGATATATACTAAAATCGATGGCTTACCACGATATCGTTGTAGGGAACGCTCTTGTGGATGCGTATGCTCGATCCGGGATGGTGGATGATGCTCGGCGAGTGATTAGAACTATGAAGCATCGGGATCCCATCACTTATACTAGCTTAGCCACGAGATTGAATCAAATGGGTGATCATGAAATGGCACTAAAAACCATTGATTCCATGCGTGCTGACAATGTCAAGATGGATGAAATTAGCTTGGCAAGCTTGGTATCTGCAGCAACTGGGGTAGGCACAATTGAAGCTGGGAAACAACTTCACTGCTATTCTTTGAGATATGGCTTAGACAATACGCGTTCAGTTAAAAATAGTTTGGTGGACTTTTATGGCAAGGTTGGATGCTTGAAGGATGCCTGCAAAGCTTTTGAAGAAATAACAGAGCCCGACGTTGTTTCTTGGAATGGATTGATATCTATATTAGCGCTCAACGGGCATATCTCCGCCGCGCTCTCTGCCTTCGATAACATGAGGTTAGCTGGTTTGAAGCCTGATTCTATCACATTGCTATCAGTACTTTCAGCTTGCAGTCAAGGTGGTTTGGTTGATTTTGGCATGCATTATTTCCAAACTATGAGAGAAACTCACAATATAGAACCGGCGTTGGATCATTATGTTTGTGTTATTGATCTCCATGGCCGCGCTGGGCAGCTAGAGAAGGCAATGGAAATTGTGGAAGGCATGCCATTTGAGGCAGATGCCAAGGTCTACAAGACATTGTTAAGCGCCTGCAAATTGCATAGGAACGTGCTGCTTGGAGAAGATGTGGCAAGAAGAGGACTTCAACTTGACCCATATGATTCATCTTTCTATTTGTTACTGGCTAGCTTGTACGATGAACTCGACCGACCCGATTTAAGCACGAAAACTCGTAAGCTAATGCGAGATCGTGGAATGAGAAAGAGTCCTAGCCAGAGCTGGGTAGAATTAAGCGGTAAGATTCATGTCTTCATCACAGGAGATAGATCACACCCTGAGATGAATGATATGGAAGAAAAGTTAGAGTTCCTGAGAGCGGAGTTCAAGAGTAGGGGCTTTTTGTATGGTGACGATGAAGATTCATGTCATCATAGTGAAAAATTAGCTCTTGCATTTGGTCTCGTCAGTATGCCTCCAAAAGGTGTTGTACGTATAATGAAGAACATAAGCATTTGCAGAGAATGTCATGACTTCATATTGCTTGCAACAAAGGTAGTAGAGAGGGAAATTGTTGTGAGAGATGGGAGCAGACTCCATGTGTTCAACAATGGAAGCTGCTCTTGCAAGCGCTACCCATGA

Protein sequence

MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGLCVHSPIIKLGLLGNLYLSNNLLSLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNMDDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKLLHSHLISLGVNLNVVLKTALVDMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFLEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALINMYMKSDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSSILGACKNQISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVIRTMKHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIEAGKQLHCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAALSAFDNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVCVIDLHGRAGQLEKAMEIVEGMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVSMPPKGVVRIMKNISICRECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKRYP
Homology
BLAST of CmoCh18G013100 vs. ExPASy Swiss-Prot
Match: Q9FLX6 (Pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H31 PE=2 SV=1)

HSP 1 Score: 860.5 bits (2222), Expect = 1.6e-248
Identity = 424/870 (48.74%), Postives = 594/870 (68.28%), Query Frame = 0

Query: 13  NELYRLEEGCSQLISICNSKSLKEGLCVHSPIIKLGLLGNLYLSNNLLSLYAKRFGLKQA 72
           NEL  L++ C +++S C S S + GL +H P+IK GLL NL L NNLLSLY K  G+  A
Sbjct: 18  NELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNA 77

Query: 73  RNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSET 132
           R LFDEM  R V +WT M +A+ +   +  A  LF+ M   G  PNEFT S+++RSC+  
Sbjct: 78  RKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGL 137

Query: 133 RELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNMDDADTVTWTTMI 192
           R++  G  VHG  IK GFE   V+G +L DLY+KC   KEA E F ++ +ADT++WT MI
Sbjct: 138 RDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMI 197

Query: 193 SSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKLLHSHLISLGVNL 252
           SSLV A+KW EALQ Y  M+++GV PNEFTF KLL  +SF+GL++GK +HS++I  G+ L
Sbjct: 198 SSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPL 257

Query: 253 NVVLKTALVDMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFLEMR 312
           NVVLKT+LVD YS + ++E A +V N + E+DVFLWTS++S F +N + KEA+  FLEMR
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317

Query: 313 MSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALINMYMKSDLID 372
             G+ P++FTYS+ LS C+ + SL+ GKQIH Q I  G E     G+AL++MYMK    +
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377

Query: 373 -DALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSSILGAC 432
            +A RVFG++ +P+V+ WT+LI GL +HGF QDC+   ++M    V+PN  TLS +L AC
Sbjct: 378 VEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437

Query: 433 K-----NQISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVIRTMKHRDPITYT 492
                  ++   H Y+L+     ++VVGN+LVDAYA S  VD A  VIR+MK RD ITYT
Sbjct: 438 SKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYT 497

Query: 493 SLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIEAGKQLHCYSLRY 552
           SL TR N++G HEMAL  I+ M  D ++MD++SL   +SA+  +G +E GK LHCYS++ 
Sbjct: 498 SLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKS 557

Query: 553 GLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAALSAF 612
           G     SV NSLVD Y K G L+DA K FEEI  PDVVSWNGL+S LA NG IS+ALSAF
Sbjct: 558 GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAF 617

Query: 613 DNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVCVIDLHGR 672
           + MR+   +PDS+T L +LSACS G L D G+ YFQ M++ +NIEP ++HYV ++ + GR
Sbjct: 618 EEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGR 677

Query: 673 AGQLEKAMEIVEGMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFYLLL 732
           AG+LE+A  +VE M  + +A ++KTLL AC+   N+ LGED+A +GL L P D + Y+LL
Sbjct: 678 AGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILL 737

Query: 733 ASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSH-PEMNDMEEK 792
           A LYDE  +P+L+ KTR LM ++ + K   +S VE+ GK+H F++ D +   + N +  +
Sbjct: 738 ADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAE 797

Query: 793 LEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVSMPPKGVVRIMKNISICRECHDFIL 852
           +E ++ E K  G  Y  +E++  HS K A+ +G +   P+  V ++KN  +C++CH+F+ 
Sbjct: 798 IESIKEEIKRFGSPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVS 857

Query: 853 LATKVVEREIVVRDGSRLHVFNNGSCSCKR 876
           + T++V+++I VRDG+++H+F NG CSCKR
Sbjct: 858 ILTRLVDKKITVRDGNQVHIFKNGECSCKR 887

BLAST of CmoCh18G013100 vs. ExPASy Swiss-Prot
Match: Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 503.8 bits (1296), Expect = 3.8e-141
Identity = 277/855 (32.40%), Postives = 460/855 (53.80%), Query Frame = 0

Query: 40   VHSPIIKLGLLGNLYLSNNLLSLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGN 99
            +H+ I+  GL  +  + N L+ LY++   +  AR +FD +  +D  SW  M +   ++  
Sbjct: 209  IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268

Query: 100  YNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCT 159
              +A  LF  M  LG  P  +  S+++ +C +   L++G  +HG  +K GF S   +   
Sbjct: 269  EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328

Query: 160  LIDLYAKCDCTKEAYETFRNMDDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPN 219
            L+ LY        A   F NM   D VT+ T+I+ L Q     +A++L+  M   G+ P+
Sbjct: 329  LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388

Query: 220  EFTFTKLLATTSFMGLKY-GKLLHSHLISLGVNLNVVLKTALVDMYSGYQELEYATKVAN 279
              T   L+   S  G  + G+ LH++   LG   N  ++ AL+++Y+   ++E A     
Sbjct: 389  SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448

Query: 280  QTPEKDVFLWTSIISCFNQNSKVKEAIAAFLEMRMSGIPPHSFTYSSALSACTLLPSLEL 339
            +T  ++V LW  ++  +     ++ +   F +M++  I P+ +TY S L  C  L  LEL
Sbjct: 449  ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508

Query: 340  GKQIHLQVILAGLEADVCAGSALINMYMKSDLIDDALRVFGSIATPSVICWTSLISGLAE 399
            G+QIH Q+I    + +    S LI+MY K   +D A  +    A   V+ WT++I+G  +
Sbjct: 509  GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 568

Query: 400  HGFEQDCYRYFLDMQAAGVQPNSFTLSSILGACKNQISMFHGYILKSMA-----YHDIVV 459
            + F+      F  M   G++ +   L++ + AC    ++  G  + + A       D+  
Sbjct: 569  YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 628

Query: 460  GNALVDAYARSGMVDDARRVIRTMKHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNV 519
             NALV  Y+R G ++++       +  D I + +L +   Q G++E AL+    M  + +
Sbjct: 629  QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688

Query: 520  KMDEISLASLVSAATGVGTIEAGKQLHCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACK 579
              +  +  S V AA+    ++ GKQ+H    + G D+   V N+L+  Y K G + DA K
Sbjct: 689  DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEK 748

Query: 580  AFEEITEPDVVSWNGLISILALNGHISAALSAFDNMRLAGLKPDSITLLSVLSACSQGGL 639
             F E++  + VSWN +I+  + +G  S AL +FD M  + ++P+ +TL+ VLSACS  GL
Sbjct: 749  QFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGL 808

Query: 640  VDFGMHYFQTMRETHNIEPALDHYVCVIDLHGRAGQLEKAMEIVEGMPFEADAKVYKTLL 699
            VD G+ YF++M   + + P  +HYVCV+D+  RAG L +A E ++ MP + DA V++TLL
Sbjct: 809  VDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLL 868

Query: 700  SACKLHRNVLLGEDVARRGLQLDPYDSSFYLLLASLYDELDRPDLSTKTRKLMRDRGMRK 759
            SAC +H+N+ +GE  A   L+L+P DS+ Y+LL++LY    + D    TR+ M+++G++K
Sbjct: 869  SACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKK 928

Query: 760  SPSQSWVELSGKIHVFITGDRSHPEMNDMEEKLEFLRAEFKSRGF----------LYGDD 819
             P QSW+E+   IH F  GD++HP  +++ E  + L       G+          L  + 
Sbjct: 929  EPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQ 988

Query: 820  EDSC--HHSEKLALAFGLVSMPPKGVVRIMKNISICRECHDFILLATKVVEREIVVRDGS 877
            +D     HSEKLA++FGL+S+P    + +MKN+ +C +CH +I   +KV  REI+VRD  
Sbjct: 989  KDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAY 1048

BLAST of CmoCh18G013100 vs. ExPASy Swiss-Prot
Match: Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 476.9 bits (1226), Expect = 5.0e-133
Identity = 257/826 (31.11%), Postives = 454/826 (54.96%), Query Frame = 0

Query: 87  WTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKLGSCVHGYAI 146
           W  +  + VR     +A   +  M  LG  P+ +    L+++ ++ ++++LG  +H +  
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 147 KGGFESKPV-LGCTLIDLYAKCDCTKEAYETFRNMDDADTVTWTTMISSLVQAQKWAEAL 206
           K G+    V +  TL++LY KC      Y+ F  + + + V+W ++ISSL   +KW  AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 207 QLYITMLESGVAPNEFTFTKLLATTSFM----GLKYGKLLHSHLISLGVNLNVVLKTALV 266
           + +  ML+  V P+ FT   ++   S +    GL  GK +H++ +  G  LN  +   LV
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 244

Query: 267 DMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFLEMRMSGIPPHSF 326
            MY    +L  +  +      +D+  W +++S   QN ++ EA+    EM + G+ P  F
Sbjct: 245 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 304

Query: 327 TYSSALSACTLLPSLELGKQIHLQVILAG-LEADVCAGSALINMYMKSDLIDDALRVFGS 386
           T SS L AC+ L  L  GK++H   +  G L+ +   GSAL++MY     +    RVF  
Sbjct: 305 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 364

Query: 387 IATPSVICWTSLISGLAEHGFEQDCYRYFLDM-QAAGVQPNSFTLSSILGACK-----NQ 446
           +    +  W ++I+G +++  +++    F+ M ++AG+  NS T++ ++ AC      ++
Sbjct: 365 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 424

Query: 447 ISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVIRTMKHRDPITYTSLATRLNQ 506
               HG+++K     D  V N L+D Y+R G +D A R+   M+ RD +T+ ++ T    
Sbjct: 425 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 484

Query: 507 MGDHEMALKTIDSMR-----------ADNVKMDEISLASLVSAATGVGTIEAGKQLHCYS 566
              HE AL  +  M+             ++K + I+L +++ +   +  +  GK++H Y+
Sbjct: 485 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 544

Query: 567 LRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAAL 626
           ++  L    +V ++LVD Y K GCL+ + K F++I + +V++WN +I    ++G+   A+
Sbjct: 545 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAI 604

Query: 627 SAFDNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVCVIDL 686
                M + G+KP+ +T +SV +ACS  G+VD G+  F  M+  + +EP+ DHY CV+DL
Sbjct: 605 DLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL 664

Query: 687 HGRAGQLEKAMEIVEGMPFEAD-AKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSF 746
            GRAG++++A +++  MP + + A  + +LL A ++H N+ +GE  A+  +QL+P  +S 
Sbjct: 665 LGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASH 724

Query: 747 YLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDM 806
           Y+LLA++Y      D +T+ R+ M+++G+RK P  SW+E   ++H F+ GD SHP+   +
Sbjct: 725 YVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 784

Query: 807 EEKLEFLRAEFKSRGF-------LYGDDEDS-----CHHSEKLALAFGLVSMPPKGVVRI 866
              LE L    +  G+       L+  +ED      C HSEKLA+AFG+++  P  ++R+
Sbjct: 785 SGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRV 844

Query: 867 MKNISICRECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKRY 877
            KN+ +C +CH      +K+V+REI++RD  R H F NG+CSC  Y
Sbjct: 845 AKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDY 889

BLAST of CmoCh18G013100 vs. ExPASy Swiss-Prot
Match: Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.7e-128
Identity = 256/868 (29.49%), Postives = 459/868 (52.88%), Query Frame = 0

Query: 27  SICNSKSLKEGLCVHSPIIKLGLLGNLYLSNNLLSLYAKRFGLKQARNLFDEM-PDRDVV 86
           ++ +S +L E   +H+ +I LGL  + + S  L+  Y+       + ++F  + P ++V 
Sbjct: 13  ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72

Query: 87  SWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKLGSCVHGYA 146
            W ++  A+ ++G + +A E +  +     SP+++T  ++I++C+   + ++G  V+   
Sbjct: 73  LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132

Query: 147 IKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNMDDADTVTWTTMISSLVQAQKWAEAL 206
           +  GFES   +G  L+D+Y++      A + F  M   D V+W ++IS       + EAL
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192

Query: 207 QLYITMLESGVAPNEFTFTKLL-ATTSFMGLKYGKLLHSHLISLGVNLNVVLKTALVDMY 266
           ++Y  +  S + P+ FT + +L A  + + +K G+ LH   +  GVN  VV+   LV MY
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 252

Query: 267 SGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFLEMRMSGIPPHSFTYS 326
             ++    A +V ++   +D   + ++I  + +   V+E++  FLE  +    P   T S
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVS 312

Query: 327 SALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALINMYMKSDLIDDALRVFGSIATP 386
           S L AC  L  L L K I+  ++ AG   +    + LI++Y K   +  A  VF S+   
Sbjct: 313 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 372

Query: 387 SVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSSILGACKNQISM-----FH 446
             + W S+ISG  + G   +  + F  M     Q +  T   ++        +      H
Sbjct: 373 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLH 432

Query: 447 GYILKSMAYHDIVVGNALVDAYARSGMVDDARRVIRTMKHRDPITYTSLATRLNQMGDHE 506
              +KS    D+ V NAL+D YA+ G V D+ ++  +M   D +T+ ++ +   + GD  
Sbjct: 433 SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA 492

Query: 507 MALKTIDSMRADNVKMDEISLASLVSAATGVGTIEAGKQLHCYSLRYGLDNTRSVKNSLV 566
             L+    MR   V  D  +    +     +     GK++HC  LR+G ++   + N+L+
Sbjct: 493 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALI 552

Query: 567 DFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAALSAFDNMRLAGLKPDSI 626
           + Y K GCL+++ + FE ++  DVV+W G+I    + G    AL  F +M  +G+ PDS+
Sbjct: 553 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 612

Query: 627 TLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVCVIDLHGRAGQLEKAMEIVEG 686
             ++++ ACS  GLVD G+  F+ M+  + I+P ++HY CV+DL  R+ ++ KA E ++ 
Sbjct: 613 VFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQA 672

Query: 687 MPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFYLLLASLYDELDRPDLS 746
           MP + DA ++ ++L AC+   ++   E V+RR ++L+P D  + +L ++ Y  L + D  
Sbjct: 673 MPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKV 732

Query: 747 TKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDMEEKLEFLRAEFKSRGFL 806
           +  RK ++D+ + K+P  SW+E+   +HVF +GD S P+   + + LE L +     G++
Sbjct: 733 SLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYI 792

Query: 807 YGDDEDS-------------CHHSEKLALAFGLVSMPPKGVVRIMKNISICRECHDFILL 866
               E S             C HSE+LA+AFGL++  P   +++MKN+ +C +CH+   L
Sbjct: 793 PDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKL 852

Query: 867 ATKVVEREIVVRDGSRLHVFNNGSCSCK 875
            +K+V REI+VRD +R H+F +G+CSCK
Sbjct: 853 ISKIVGREILVRDANRFHLFKDGTCSCK 879

BLAST of CmoCh18G013100 vs. ExPASy Swiss-Prot
Match: Q9ZUW3 (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H60 PE=2 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.2e-128
Identity = 271/823 (32.93%), Postives = 439/823 (53.34%), Query Frame = 0

Query: 69  LKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRS 128
           L  A NLFD+ P RD  S+ ++   + R G   +A  LF  +  LG   +    S++++ 
Sbjct: 43  LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102

Query: 129 CSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNMDDADTVTW 188
            +   +   G  +H   IK GF     +G +L+D Y K    K+  + F  M + + VTW
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162

Query: 189 TTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGL-KYGKLLHSHLIS 248
           TT+IS   +     E L L++ M   G  PN FTF   L   +  G+   G  +H+ ++ 
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222

Query: 249 LGVNLNVVLKTALVDMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAA 308
            G++  + +  +L+++Y     +  A  + ++T  K V  W S+IS +  N    EA+  
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282

Query: 309 FLEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALINMYMK 368
           F  MR++ +     +++S +  C  L  L   +Q+H  V+  G   D    +AL+  Y K
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342

Query: 369 SDLIDDALRVFGSI-ATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSS 428
              + DALR+F  I    +V+ WT++ISG  ++  +++    F +M+  GV+PN FT S 
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402

Query: 429 ILGACK-NQISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVIRTMKHRDPITY 488
           IL A      S  H  ++K+       VG AL+DAY + G V++A +V   +  +D + +
Sbjct: 403 ILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAW 462

Query: 489 TSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASL--VSAATGVGTIEAGKQLHCYS 548
           +++     Q G+ E A+K    +    +K +E + +S+  V AAT   ++  GKQ H ++
Sbjct: 463 SAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN-ASMGQGKQFHGFA 522

Query: 549 LRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAAL 608
           ++  LD++  V ++L+  Y K G ++ A + F+   E D+VSWN +IS  A +G    AL
Sbjct: 523 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKAL 582

Query: 609 SAFDNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVCVIDL 668
             F  M+   +K D +T + V +AC+  GLV+ G  YF  M     I P  +H  C++DL
Sbjct: 583 DVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDL 642

Query: 669 HGRAGQLEKAMEIVEGMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFY 728
           + RAGQLEKAM+++E MP  A + +++T+L+AC++H+   LG   A + + + P DS+ Y
Sbjct: 643 YSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAY 702

Query: 729 LLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDME 788
           +LL+++Y E        K RKLM +R ++K P  SW+E+  K + F+ GDRSHP  + + 
Sbjct: 703 VLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIY 762

Query: 789 EKLEFLRAEFKSRGFLYG--------DDEDS----CHHSEKLALAFGLVSMPPKGVVRIM 848
            KLE L    K  G+           DDE        HSE+LA+AFGL++ P    + I+
Sbjct: 763 MKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLII 822

Query: 849 KNISICRECHDFILLATKVVEREIVVRDGSRLHVF-NNGSCSC 874
           KN+ +C +CH  I L  K+ EREIVVRD +R H F ++G CSC
Sbjct: 823 KNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSC 864

BLAST of CmoCh18G013100 vs. ExPASy TrEMBL
Match: A0A6J1G1W5 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449930 PE=3 SV=1)

HSP 1 Score: 1762.3 bits (4563), Expect = 0.0e+00
Identity = 877/877 (100.00%), Postives = 877/877 (100.00%), Query Frame = 0

Query: 1   MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGLCVHSPIIKLGLLGNLYLSNNLL 60
           MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGLCVHSPIIKLGLLGNLYLSNNLL
Sbjct: 1   MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGLCVHSPIIKLGLLGNLYLSNNLL 60

Query: 61  SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
           SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF
Sbjct: 61  SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120

Query: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNM 180
           TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNM
Sbjct: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNM 180

Query: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
           DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL
Sbjct: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240

Query: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSK 300
           LHSHLISLGVNLNVVLKTALVDMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSK
Sbjct: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSK 300

Query: 301 VKEAIAAFLEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
           VKEAIAAFLEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA
Sbjct: 301 VKEAIAAFLEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360

Query: 361 LINMYMKSDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPN 420
           LINMYMKSDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPN
Sbjct: 361 LINMYMKSDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPN 420

Query: 421 SFTLSSILGACKNQISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVIRTMKHR 480
           SFTLSSILGACKNQISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVIRTMKHR
Sbjct: 421 SFTLSSILGACKNQISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVIRTMKHR 480

Query: 481 DPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIEAGKQLH 540
           DPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIEAGKQLH
Sbjct: 481 DPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIEAGKQLH 540

Query: 541 CYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHIS 600
           CYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHIS
Sbjct: 541 CYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHIS 600

Query: 601 AALSAFDNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVCV 660
           AALSAFDNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVCV
Sbjct: 601 AALSAFDNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVCV 660

Query: 661 IDLHGRAGQLEKAMEIVEGMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDS 720
           IDLHGRAGQLEKAMEIVEGMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDS
Sbjct: 661 IDLHGRAGQLEKAMEIVEGMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDS 720

Query: 721 SFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMN 780
           SFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMN
Sbjct: 721 SFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMN 780

Query: 781 DMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVSMPPKGVVRIMKNISICREC 840
           DMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVSMPPKGVVRIMKNISICREC
Sbjct: 781 DMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVSMPPKGVVRIMKNISICREC 840

Query: 841 HDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKRYP 878
           HDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKRYP
Sbjct: 841 HDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKRYP 877

BLAST of CmoCh18G013100 vs. ExPASy TrEMBL
Match: A0A6J1HYM3 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467799 PE=3 SV=1)

HSP 1 Score: 1711.4 bits (4431), Expect = 0.0e+00
Identity = 851/876 (97.15%), Postives = 861/876 (98.29%), Query Frame = 0

Query: 1   MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGLCVHSPIIKLGLLGNLYLSNNLL 60
           MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEG+CVHSPIIKLGLLGNLYLSNNLL
Sbjct: 1   MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL 60

Query: 61  SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
           SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF
Sbjct: 61  SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120

Query: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNM 180
           TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNM
Sbjct: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNM 180

Query: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
           DDADTVTWTTMISSLVQAQKWAEA QLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL
Sbjct: 181 DDADTVTWTTMISSLVQAQKWAEAPQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240

Query: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSK 300
           LHSHLISLGVNLNVVLKTALVDMYSGYQELEYA KVANQTPEKDVFLWTSIISCFNQNSK
Sbjct: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYAMKVANQTPEKDVFLWTSIISCFNQNSK 300

Query: 301 VKEAIAAFLEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
           VKEAIAAF EMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQ+ILAGLEADVCAGSA
Sbjct: 301 VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQIILAGLEADVCAGSA 360

Query: 361 LINMYMKSDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPN 420
           LINMYMKSDLI+DALRVF SIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPN
Sbjct: 361 LINMYMKSDLIEDALRVFRSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPN 420

Query: 421 SFTLSSILGACKNQISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVIRTMKHR 480
           SFTLSSILGACKNQISMFHGY+LKSMAY DIVVGNALVDAYARSGMVDDARRVIRTMKHR
Sbjct: 421 SFTLSSILGACKNQISMFHGYVLKSMAYQDIVVGNALVDAYARSGMVDDARRVIRTMKHR 480

Query: 481 DPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIEAGKQLH 540
           DPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATG+GTIE GKQLH
Sbjct: 481 DPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGLGTIETGKQLH 540

Query: 541 CYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHIS 600
           C+SLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHIS
Sbjct: 541 CFSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHIS 600

Query: 601 AALSAFDNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVCV 660
           AALSAFDNMRLAGL PDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYV V
Sbjct: 601 AALSAFDNMRLAGLNPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVRV 660

Query: 661 IDLHGRAGQLEKAMEIVEGMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDS 720
           IDLHGRAGQLEKAMEIVE MPFEADAK+YKTLLSACKLHRNVLLGEDVARRGL LDPYDS
Sbjct: 661 IDLHGRAGQLEKAMEIVESMPFEADAKIYKTLLSACKLHRNVLLGEDVARRGLHLDPYDS 720

Query: 721 SFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMN 780
           SFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMN
Sbjct: 721 SFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMN 780

Query: 781 DMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVSMPPKGVVRIMKNISICREC 840
           DMEEKLEFLRAEFKSRGFLY DDEDSCHHSEKLALAFGLVSMPP+ V+RIMKNISICREC
Sbjct: 781 DMEEKLEFLRAEFKSRGFLYRDDEDSCHHSEKLALAFGLVSMPPEAVIRIMKNISICREC 840

Query: 841 HDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKRY 877
           HDFI+LATKVVEREIVVRD SRLHVF NGSCSCK Y
Sbjct: 841 HDFIVLATKVVEREIVVRDRSRLHVFKNGSCSCKHY 876

BLAST of CmoCh18G013100 vs. ExPASy TrEMBL
Match: A0A6J1CHG9 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011682 PE=3 SV=1)

HSP 1 Score: 1491.1 bits (3859), Expect = 0.0e+00
Identity = 733/882 (83.11%), Postives = 806/882 (91.38%), Query Frame = 0

Query: 1   MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGLCVHSPIIKLGLLGNLYLSNNLL 60
           M+CRTVPKF+N NEL RLEE CS LISICNSKSLKEG+CVHSPIIKLGL GNLYLSNNLL
Sbjct: 1   MICRTVPKFLNRNELNRLEETCSHLISICNSKSLKEGICVHSPIIKLGLYGNLYLSNNLL 60

Query: 61  SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
           +LYAKRFGLKQARNLFDEMPD+DVVSWTTMQAAYVR+ +Y +AFELFDLM  LG+ PNEF
Sbjct: 61  TLYAKRFGLKQARNLFDEMPDKDVVSWTTMQAAYVRNRSYIEAFELFDLMVILGHCPNEF 120

Query: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNM 180
           TLSTL+RSCSET EL+LG+CVHGYAIKGGFESKPVLGCTLID+YAKCDCT+EA E FRNM
Sbjct: 121 TLSTLLRSCSETGELELGACVHGYAIKGGFESKPVLGCTLIDMYAKCDCTEEACEVFRNM 180

Query: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
           D+ADTVTWT  ISSLVQAQKW EALQLYITM+ESGV PNEFTFTKLLAT +F+ LKYGKL
Sbjct: 181 DNADTVTWTATISSLVQAQKWNEALQLYITMIESGVTPNEFTFTKLLATINFLDLKYGKL 240

Query: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSK 300
           LH+H+I+ GV+LNV+LKT LVDMYS YQELE A KVANQT EKDV LWTSIISCFNQN K
Sbjct: 241 LHNHVITFGVDLNVLLKTTLVDMYSRYQELEDAMKVANQTAEKDVHLWTSIISCFNQNLK 300

Query: 301 VKEAIAAFLEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
           VKEAIA   EMR+SGIPP+SFTYSS LSACTL+PSLELGKQIHLQVILAGLEADVCAGSA
Sbjct: 301 VKEAIATLQEMRISGIPPNSFTYSSVLSACTLIPSLELGKQIHLQVILAGLEADVCAGSA 360

Query: 361 LINMYMK-SDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQP 420
           LINMYMK SD I+DALRVF +I +P+VICWTSLISGLAEHG EQDCYRYFLDMQAAGVQP
Sbjct: 361 LINMYMKCSDSINDALRVFRTITSPNVICWTSLISGLAEHGCEQDCYRYFLDMQAAGVQP 420

Query: 421 NSFTLSSILGAC-----KNQISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVI 480
           NSFTLSSILGAC     +N+ SMFHGYILK  A+HDI+VGNALVDAYARS MVD+A RVI
Sbjct: 421 NSFTLSSILGACSSAKSQNRTSMFHGYILKIRAHHDIIVGNALVDAYARSRMVDEAWRVI 480

Query: 481 RTMKHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIE 540
            TM HRD ITYTSLATRLNQMGDHEMALKTI SMR DNV+ DE+SLASL+SAATG+GT++
Sbjct: 481 STMNHRDAITYTSLATRLNQMGDHEMALKTISSMRDDNVRKDEVSLASLISAATGLGTVK 540

Query: 541 AGKQLHCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILA 600
            G+QLHCYSL+YGL NTRSVKNSL+D YGKVGCLKDA KAFEEITEPDVVSWNG+IS+LA
Sbjct: 541 IGEQLHCYSLKYGLYNTRSVKNSLIDLYGKVGCLKDAQKAFEEITEPDVVSWNGMISVLA 600

Query: 601 LNGHISAALSAFDNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPAL 660
           LNGH+S+ALSAFDNMRLAGLKPDSIT L +LSACSQGGLVDFGMHYFQ+MRE H +EP L
Sbjct: 601 LNGHVSSALSAFDNMRLAGLKPDSITFLLILSACSQGGLVDFGMHYFQSMREIHYVEPEL 660

Query: 661 DHYVCVIDLHGRAGQLEKAMEIVEGMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQ 720
           DHYVC++DL GRAGQLEKAME+VE MPFEADAK+YKTLLSACKLH+N+LLGEDVARRGLQ
Sbjct: 661 DHYVCLVDLLGRAGQLEKAMEVVESMPFEADAKIYKTLLSACKLHKNMLLGEDVARRGLQ 720

Query: 721 LDPYDSSFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDR 780
           LDPYDSSFYLLLA+LYDEL+RPDLS +TRKLMRDRG+RKSPSQSW ELS  IH+FITGDR
Sbjct: 721 LDPYDSSFYLLLANLYDELNRPDLSKETRKLMRDRGVRKSPSQSWTELSNSIHLFITGDR 780

Query: 781 SHPEMNDMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVSMPPKGVVRIMKNI 840
           SHP++ND++EKLEFL+AEFK RGFLY  DE+S HHSEKLALAFGL+++PPK V+RIMKNI
Sbjct: 781 SHPQINDIQEKLEFLKAEFKVRGFLYHGDENSSHHSEKLALAFGLINLPPKAVIRIMKNI 840

Query: 841 SICRECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKRY 877
           SICRECHDFILL TKV EREIVVRDGSRLHVF NGSCSC+ Y
Sbjct: 841 SICRECHDFILLVTKVAEREIVVRDGSRLHVFKNGSCSCRHY 882

BLAST of CmoCh18G013100 vs. ExPASy TrEMBL
Match: A0A7N2RAB8 (DYW_deaminase domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 1076.2 bits (2782), Expect = 0.0e+00
Identity = 532/882 (60.32%), Postives = 675/882 (76.53%), Query Frame = 0

Query: 1   MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGLCVHSPIIKLGLLGNLYLSNNLL 60
           MLC+TV K  +  ELYR ++ C +++S+CNSKSLKEG+CVHSPIIK+GL  ++YL+NNLL
Sbjct: 1   MLCKTVTKTCHRTELYRFQDICLRVVSLCNSKSLKEGVCVHSPIIKMGLQDDMYLNNNLL 60

Query: 61  SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
           SLYAK FG+  A + FDEMP +DVVSWT + ++YV + N+  A  LFD M      PNEF
Sbjct: 61  SLYAKCFGVDHAHHFFDEMPCKDVVSWTGILSSYVINENHEQALRLFDSMLNSSQYPNEF 120

Query: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNM 180
           TLS+++RSCS   E   G+ +  Y IK GF S P+L   LIDLY+KC+CTKEAY+ F  +
Sbjct: 121 TLSSVLRSCSALGEFDYGTLIQAYMIKNGFHSNPILASALIDLYSKCNCTKEAYKVFECV 180

Query: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
           D  DTV+WTTMISSLVQAQKW++ALQLYI M+E  V PNEFTF KLLA +  +G  YGKL
Sbjct: 181 DGGDTVSWTTMISSLVQAQKWSQALQLYIRMIEKKVPPNEFTFVKLLAASGSLGSSYGKL 240

Query: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSK 300
           +H+H+I LG+ LNV+LKTALVDMYS    +E A KV+NQTPE+DVFLWT+IIS F QN K
Sbjct: 241 VHAHMILLGIELNVILKTALVDMYSKCHRMEDAVKVSNQTPERDVFLWTAIISGFIQNMK 300

Query: 301 VKEAIAAFLEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
           VKEAIAA  EM MSGI P++F+YS+ L+A + + SLELG+Q+H +VI AGLE D+  G+A
Sbjct: 301 VKEAIAALSEMVMSGIVPNNFSYSTILNASSSILSLELGEQVHSRVIKAGLEDDISVGNA 360

Query: 361 LINMYMK-SDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQP 420
           LI+MYMK S+LID+ALRVF  + +P+VI WTSLI+G A+HGFE+D +R F +M+A G+ P
Sbjct: 361 LIDMYMKCSNLIDNALRVFRGVTSPNVITWTSLIAGFAKHGFEEDSFRSFEEMRALGLAP 420

Query: 421 NSFTLSSILGACK-----NQISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVI 480
           NSFTLSSILGAC      +Q    HGYI+K  A  DIVVGNALVDAYA  GMVD+AR VI
Sbjct: 421 NSFTLSSILGACSTMKSHSQTMKLHGYIIKIKADCDIVVGNALVDAYAGLGMVDEARCVI 480

Query: 481 RTMKHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIE 540
           R M HRD ITYTSLATR+NQMG H+ AL+ I  M  D+VKMD  S++S +SAA G+G+++
Sbjct: 481 RKMDHRDAITYTSLATRINQMGYHDRALEIIKYMNKDDVKMDGFSMSSFLSAAAGLGSMK 540

Query: 541 AGKQLHCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILA 600
           AG QLHC+S++ GL    SV N +VD YGK GC+ DA +AF EITEPDV SWNG IS LA
Sbjct: 541 AGMQLHCFSVKSGLRCWLSVSNGVVDLYGKCGCIHDAHRAFGEITEPDVASWNGWISGLA 600

Query: 601 LNGHISAALSAFDNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPAL 660
            NG+IS+ALSAF++MRL G+KPD +T L VL ACS GGLVD G+ YF +MRETH I P L
Sbjct: 601 SNGYISSALSAFEDMRLVGVKPDLVTFLLVLFACSHGGLVDLGLEYFHSMRETHGIAPQL 660

Query: 661 DHYVCVIDLHGRAGQLEKAMEIVEGMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQ 720
           DHYVC+IDL GRAGQLE+AM +++ MPF  DA +YKTLLSA KLH NV LGED+AR+G+ 
Sbjct: 661 DHYVCLIDLLGRAGQLEEAMGVIKTMPFRPDALIYKTLLSASKLHGNVPLGEDMARQGID 720

Query: 721 LDPYDSSFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDR 780
           LDP D +FY+LLA+LYD   R DLS K R LMR+RG+ K+P QSW+E+  +IH F   DR
Sbjct: 721 LDPSDPAFYILLANLYDRSGRSDLSEKARGLMRERGLTKNPCQSWMEIRNQIHHFTAEDR 780

Query: 781 SHPEMNDMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVSMPPKGVVRIMKNI 840
           SHP++N + EK+E L  EFK RG+LY D+ D  +HSEKLA+AFGL+S P K  + I+K++
Sbjct: 781 SHPQINQIHEKIESLMTEFKYRGYLYRDNRDKSYHSEKLAVAFGLLSTPSKAPILIIKDM 840

Query: 841 SICRECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKRY 877
            IC +CH F++L T++V+REI++R+G+R+H F  G+CSC+ Y
Sbjct: 841 RICMDCHYFVMLVTELVDREIILREGNRVHSFKKGNCSCRGY 882

BLAST of CmoCh18G013100 vs. ExPASy TrEMBL
Match: A0A6P3ZHY3 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Ziziphus jujuba OX=326968 GN=LOC107414670 PE=3 SV=1)

HSP 1 Score: 1063.5 bits (2749), Expect = 4.7e-307
Identity = 522/874 (59.73%), Postives = 668/874 (76.43%), Query Frame = 0

Query: 6   VPKFVNINELYRLEEGCSQLISICNSKSLKEGLCVHSPIIKLGLLGNLYLSNNLLSLYAK 65
           V KF N N     E+ C +++ +CNS+SLKEG+C+HSPIIKLGL  NL+L+NNLLSLYAK
Sbjct: 6   VTKFFNRN-----EDSCLKILYLCNSQSLKEGVCIHSPIIKLGLQDNLFLNNNLLSLYAK 65

Query: 66  RFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTL 125
            FG +QAR  FDEMP RDVVSWT + +AYVR+G++++A ELFD M   G++PN+FTLS++
Sbjct: 66  CFGARQARYFFDEMPYRDVVSWTGILSAYVRNGDHDEALELFDSMVVSGHNPNQFTLSSV 125

Query: 126 IRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNMDDADT 185
           +RSCS   +   G+  H Y IK GFE  P+L   LID YAKCDC++E+Y  F +MD+ DT
Sbjct: 126 LRSCSALGQFDYGTRAHAYVIKFGFELNPLLCSALIDFYAKCDCSEESYSIFGDMDNGDT 185

Query: 186 VTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKLLHSHL 245
           ++WTT+ISSL QAQKW+ AL+ YI M+ + V PNEFTF KL A + F+G+ YGKLLH+HL
Sbjct: 186 ISWTTIISSLTQAQKWSLALKHYIDMINARVPPNEFTFVKLFAASCFLGMNYGKLLHAHL 245

Query: 246 ISLGVNLNVVLKTALVDMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSKVKEAI 305
           I LG+ L+++LKTAL+DMYS +Q ++ A KV+NQTPE DV LWTS+IS F    K+ EAI
Sbjct: 246 IMLGIRLSLILKTALIDMYSKFQMMDDAIKVSNQTPEYDVQLWTSVISGFTHVLKINEAI 305

Query: 306 AAFLEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALINMY 365
           AA  EM+  G  P++FTYSS L AC+   SLELGKQIH  VI+ G E DVC G+AL++MY
Sbjct: 306 AALHEMKTFGFVPNNFTYSSILKACSTALSLELGKQIHSLVIMTGFEEDVCVGNALVDMY 365

Query: 366 MK-SDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTL 425
            K S L++DAL VF  I +P+VICWTSLI+G AEHGFEQD +  F+ MQAAGV+PNSFTL
Sbjct: 366 TKCSTLMEDALIVFRGITSPNVICWTSLIAGFAEHGFEQDSFECFVQMQAAGVRPNSFTL 425

Query: 426 SSILGACK-----NQISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVIRTMKH 485
           S+ L AC       Q    HGYI+K+ +  DIVVGNALVDAYA  GMVDDA  VIR M H
Sbjct: 426 SATLRACSTVKSYTQTLKLHGYIMKTKSDCDIVVGNALVDAYAALGMVDDAWHVIRMMSH 485

Query: 486 RDPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIEAGKQL 545
           RD ITYTSLATR+NQMG HEMA   I  M  D++KMD  SLAS +SA+  + T+E G+QL
Sbjct: 486 RDTITYTSLATRINQMGHHEMAQDVITHMNNDDIKMDGFSLASFLSASAALATLETGRQL 545

Query: 546 HCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHI 605
           HCY+ + GL++  SV N+L+D Y K GC  DA +AF EI++PDVVSWNGLIS LA NG+ 
Sbjct: 546 HCYAFKSGLNSCISVLNALIDMYWKCGCASDAYRAFGEISDPDVVSWNGLISGLASNGYT 605

Query: 606 SAALSAFDNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVC 665
           S+A+SAF++MRLAG KPDS+TLL VL ACS+GGLVD G+ YFQ+M+E +++ P LDHYVC
Sbjct: 606 SSAISAFEDMRLAGSKPDSVTLLFVLFACSRGGLVDMGLEYFQSMKEKYDVAPRLDHYVC 665

Query: 666 VIDLHGRAGQLEKAMEIVEGMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYD 725
           ++DL GRAG+LE AME++  MPF+    +YKTLL ACKLH+N+ LGED+AR+G++LDP D
Sbjct: 666 LVDLLGRAGRLEDAMEVILNMPFKPHPLIYKTLLVACKLHKNLPLGEDMARKGIELDPSD 725

Query: 726 SSFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEM 785
            +FYLLLA LYD+  + DL+ KTR+LMR+RG+R +PSQSW+EL  K+H FI GDRSHP++
Sbjct: 726 QAFYLLLAKLYDDSGQSDLAMKTRRLMRERGLRTNPSQSWMELRNKVHTFIAGDRSHPQI 785

Query: 786 NDMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVSMPPKGVVRIMKNISICRE 845
           N++++K+E L  +FK RG L+ D E S +HSEKLALAFGL++ P    +RI KN  IC E
Sbjct: 786 NEIQDKIESLITKFKHRG-LHEDMEGSSYHSEKLALAFGLLNTPSNAPIRISKNKPICSE 845

Query: 846 CHDFILLATKVVEREIVVRDGSRLHVFNNGSCSC 874
           CHDFI+LATK+V+REI+VRDG+R+H F  G CSC
Sbjct: 846 CHDFIMLATKLVDREIIVRDGNRIHAFKKGECSC 873

BLAST of CmoCh18G013100 vs. TAIR 10
Match: AT5G52850.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 860.5 bits (2222), Expect = 1.2e-249
Identity = 424/870 (48.74%), Postives = 594/870 (68.28%), Query Frame = 0

Query: 13  NELYRLEEGCSQLISICNSKSLKEGLCVHSPIIKLGLLGNLYLSNNLLSLYAKRFGLKQA 72
           NEL  L++ C +++S C S S + GL +H P+IK GLL NL L NNLLSLY K  G+  A
Sbjct: 18  NELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNA 77

Query: 73  RNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSET 132
           R LFDEM  R V +WT M +A+ +   +  A  LF+ M   G  PNEFT S+++RSC+  
Sbjct: 78  RKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGL 137

Query: 133 RELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNMDDADTVTWTTMI 192
           R++  G  VHG  IK GFE   V+G +L DLY+KC   KEA E F ++ +ADT++WT MI
Sbjct: 138 RDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMI 197

Query: 193 SSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKLLHSHLISLGVNL 252
           SSLV A+KW EALQ Y  M+++GV PNEFTF KLL  +SF+GL++GK +HS++I  G+ L
Sbjct: 198 SSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPL 257

Query: 253 NVVLKTALVDMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFLEMR 312
           NVVLKT+LVD YS + ++E A +V N + E+DVFLWTS++S F +N + KEA+  FLEMR
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317

Query: 313 MSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALINMYMKSDLID 372
             G+ P++FTYS+ LS C+ + SL+ GKQIH Q I  G E     G+AL++MYMK    +
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377

Query: 373 -DALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSSILGAC 432
            +A RVFG++ +P+V+ WT+LI GL +HGF QDC+   ++M    V+PN  TLS +L AC
Sbjct: 378 VEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437

Query: 433 K-----NQISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVIRTMKHRDPITYT 492
                  ++   H Y+L+     ++VVGN+LVDAYA S  VD A  VIR+MK RD ITYT
Sbjct: 438 SKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYT 497

Query: 493 SLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIEAGKQLHCYSLRY 552
           SL TR N++G HEMAL  I+ M  D ++MD++SL   +SA+  +G +E GK LHCYS++ 
Sbjct: 498 SLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKS 557

Query: 553 GLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAALSAF 612
           G     SV NSLVD Y K G L+DA K FEEI  PDVVSWNGL+S LA NG IS+ALSAF
Sbjct: 558 GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAF 617

Query: 613 DNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVCVIDLHGR 672
           + MR+   +PDS+T L +LSACS G L D G+ YFQ M++ +NIEP ++HYV ++ + GR
Sbjct: 618 EEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGR 677

Query: 673 AGQLEKAMEIVEGMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFYLLL 732
           AG+LE+A  +VE M  + +A ++KTLL AC+   N+ LGED+A +GL L P D + Y+LL
Sbjct: 678 AGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILL 737

Query: 733 ASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSH-PEMNDMEEK 792
           A LYDE  +P+L+ KTR LM ++ + K   +S VE+ GK+H F++ D +   + N +  +
Sbjct: 738 ADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAE 797

Query: 793 LEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVSMPPKGVVRIMKNISICRECHDFIL 852
           +E ++ E K  G  Y  +E++  HS K A+ +G +   P+  V ++KN  +C++CH+F+ 
Sbjct: 798 IESIKEEIKRFGSPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVS 857

Query: 853 LATKVVEREIVVRDGSRLHVFNNGSCSCKR 876
           + T++V+++I VRDG+++H+F NG CSCKR
Sbjct: 858 ILTRLVDKKITVRDGNQVHIFKNGECSCKR 887

BLAST of CmoCh18G013100 vs. TAIR 10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 503.8 bits (1296), Expect = 2.7e-142
Identity = 277/855 (32.40%), Postives = 460/855 (53.80%), Query Frame = 0

Query: 40   VHSPIIKLGLLGNLYLSNNLLSLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGN 99
            +H+ I+  GL  +  + N L+ LY++   +  AR +FD +  +D  SW  M +   ++  
Sbjct: 209  IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268

Query: 100  YNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCT 159
              +A  LF  M  LG  P  +  S+++ +C +   L++G  +HG  +K GF S   +   
Sbjct: 269  EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328

Query: 160  LIDLYAKCDCTKEAYETFRNMDDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPN 219
            L+ LY        A   F NM   D VT+ T+I+ L Q     +A++L+  M   G+ P+
Sbjct: 329  LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388

Query: 220  EFTFTKLLATTSFMGLKY-GKLLHSHLISLGVNLNVVLKTALVDMYSGYQELEYATKVAN 279
              T   L+   S  G  + G+ LH++   LG   N  ++ AL+++Y+   ++E A     
Sbjct: 389  SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448

Query: 280  QTPEKDVFLWTSIISCFNQNSKVKEAIAAFLEMRMSGIPPHSFTYSSALSACTLLPSLEL 339
            +T  ++V LW  ++  +     ++ +   F +M++  I P+ +TY S L  C  L  LEL
Sbjct: 449  ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508

Query: 340  GKQIHLQVILAGLEADVCAGSALINMYMKSDLIDDALRVFGSIATPSVICWTSLISGLAE 399
            G+QIH Q+I    + +    S LI+MY K   +D A  +    A   V+ WT++I+G  +
Sbjct: 509  GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 568

Query: 400  HGFEQDCYRYFLDMQAAGVQPNSFTLSSILGACKNQISMFHGYILKSMA-----YHDIVV 459
            + F+      F  M   G++ +   L++ + AC    ++  G  + + A       D+  
Sbjct: 569  YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 628

Query: 460  GNALVDAYARSGMVDDARRVIRTMKHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNV 519
             NALV  Y+R G ++++       +  D I + +L +   Q G++E AL+    M  + +
Sbjct: 629  QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688

Query: 520  KMDEISLASLVSAATGVGTIEAGKQLHCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACK 579
              +  +  S V AA+    ++ GKQ+H    + G D+   V N+L+  Y K G + DA K
Sbjct: 689  DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEK 748

Query: 580  AFEEITEPDVVSWNGLISILALNGHISAALSAFDNMRLAGLKPDSITLLSVLSACSQGGL 639
             F E++  + VSWN +I+  + +G  S AL +FD M  + ++P+ +TL+ VLSACS  GL
Sbjct: 749  QFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGL 808

Query: 640  VDFGMHYFQTMRETHNIEPALDHYVCVIDLHGRAGQLEKAMEIVEGMPFEADAKVYKTLL 699
            VD G+ YF++M   + + P  +HYVCV+D+  RAG L +A E ++ MP + DA V++TLL
Sbjct: 809  VDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLL 868

Query: 700  SACKLHRNVLLGEDVARRGLQLDPYDSSFYLLLASLYDELDRPDLSTKTRKLMRDRGMRK 759
            SAC +H+N+ +GE  A   L+L+P DS+ Y+LL++LY    + D    TR+ M+++G++K
Sbjct: 869  SACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKK 928

Query: 760  SPSQSWVELSGKIHVFITGDRSHPEMNDMEEKLEFLRAEFKSRGF----------LYGDD 819
             P QSW+E+   IH F  GD++HP  +++ E  + L       G+          L  + 
Sbjct: 929  EPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQ 988

Query: 820  EDSC--HHSEKLALAFGLVSMPPKGVVRIMKNISICRECHDFILLATKVVEREIVVRDGS 877
            +D     HSEKLA++FGL+S+P    + +MKN+ +C +CH +I   +KV  REI+VRD  
Sbjct: 989  KDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAY 1048

BLAST of CmoCh18G013100 vs. TAIR 10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 476.9 bits (1226), Expect = 3.6e-134
Identity = 257/826 (31.11%), Postives = 454/826 (54.96%), Query Frame = 0

Query: 87  WTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKLGSCVHGYAI 146
           W  +  + VR     +A   +  M  LG  P+ +    L+++ ++ ++++LG  +H +  
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 147 KGGFESKPV-LGCTLIDLYAKCDCTKEAYETFRNMDDADTVTWTTMISSLVQAQKWAEAL 206
           K G+    V +  TL++LY KC      Y+ F  + + + V+W ++ISSL   +KW  AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 207 QLYITMLESGVAPNEFTFTKLLATTSFM----GLKYGKLLHSHLISLGVNLNVVLKTALV 266
           + +  ML+  V P+ FT   ++   S +    GL  GK +H++ +  G  LN  +   LV
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 244

Query: 267 DMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFLEMRMSGIPPHSF 326
            MY    +L  +  +      +D+  W +++S   QN ++ EA+    EM + G+ P  F
Sbjct: 245 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 304

Query: 327 TYSSALSACTLLPSLELGKQIHLQVILAG-LEADVCAGSALINMYMKSDLIDDALRVFGS 386
           T SS L AC+ L  L  GK++H   +  G L+ +   GSAL++MY     +    RVF  
Sbjct: 305 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 364

Query: 387 IATPSVICWTSLISGLAEHGFEQDCYRYFLDM-QAAGVQPNSFTLSSILGACK-----NQ 446
           +    +  W ++I+G +++  +++    F+ M ++AG+  NS T++ ++ AC      ++
Sbjct: 365 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 424

Query: 447 ISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVIRTMKHRDPITYTSLATRLNQ 506
               HG+++K     D  V N L+D Y+R G +D A R+   M+ RD +T+ ++ T    
Sbjct: 425 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 484

Query: 507 MGDHEMALKTIDSMR-----------ADNVKMDEISLASLVSAATGVGTIEAGKQLHCYS 566
              HE AL  +  M+             ++K + I+L +++ +   +  +  GK++H Y+
Sbjct: 485 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 544

Query: 567 LRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAAL 626
           ++  L    +V ++LVD Y K GCL+ + K F++I + +V++WN +I    ++G+   A+
Sbjct: 545 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAI 604

Query: 627 SAFDNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVCVIDL 686
                M + G+KP+ +T +SV +ACS  G+VD G+  F  M+  + +EP+ DHY CV+DL
Sbjct: 605 DLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL 664

Query: 687 HGRAGQLEKAMEIVEGMPFEAD-AKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSF 746
            GRAG++++A +++  MP + + A  + +LL A ++H N+ +GE  A+  +QL+P  +S 
Sbjct: 665 LGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASH 724

Query: 747 YLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDM 806
           Y+LLA++Y      D +T+ R+ M+++G+RK P  SW+E   ++H F+ GD SHP+   +
Sbjct: 725 YVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 784

Query: 807 EEKLEFLRAEFKSRGF-------LYGDDEDS-----CHHSEKLALAFGLVSMPPKGVVRI 866
              LE L    +  G+       L+  +ED      C HSEKLA+AFG+++  P  ++R+
Sbjct: 785 SGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRV 844

Query: 867 MKNISICRECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKRY 877
            KN+ +C +CH      +K+V+REI++RD  R H F NG+CSC  Y
Sbjct: 845 AKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDY 889

BLAST of CmoCh18G013100 vs. TAIR 10
Match: AT1G16480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 466.1 bits (1198), Expect = 6.3e-131
Identity = 271/875 (30.97%), Postives = 452/875 (51.66%), Query Frame = 0

Query: 23  SQLISIC--NSKSLKEGLCVHSPIIKLGLLGNLYLSNNLLSLYAKRFGLKQARNLFDEMP 82
           + L++ C  +    +EG+ VH  + K GLL ++Y+S  +L LY     +  +R +F+EMP
Sbjct: 62  ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121

Query: 83  DRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKLGSC 142
           DR+VVSWT++   Y   G   +  +++  M   G   NE ++S +I SC   ++  LG  
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181

Query: 143 VHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNMDDADTVTWTTMISSLVQAQK 202
           + G  +K G ESK  +  +LI +         A   F  M + DT++W ++ ++  Q   
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241

Query: 203 WAEALQLYITMLESGVAPNEFTFTKLLATTSFMG-LKYGKLLHSHLISLGVNLNVVLKTA 262
             E+ +++  M       N  T + LL+    +   K+G+ +H  ++ +G +  V +   
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNT 301

Query: 263 LVDMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFLEMRMSGIPPH 322
           L+ MY+G      A  V  Q P KD+  W S+++ F  + +  +A+     M  SG   +
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 361

Query: 323 SFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALINMYMKSDLIDDALRVFG 382
             T++SAL+AC      E G+ +H  V+++GL  +   G+AL++MY K   + ++ RV  
Sbjct: 362 YVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLL 421

Query: 383 SIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSSILGAC------KN 442
            +    V+ W +LI G AE          F  M+  GV  N  T+ S+L AC        
Sbjct: 422 QMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 481

Query: 443 QISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVIRTMKHRDPITYTSLATRLN 502
           +    H YI+ +    D  V N+L+  YA+ G +  ++ +   + +R+ IT+ ++     
Sbjct: 482 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 541

Query: 503 QMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIEAGKQLHCYSLRYGLDNTRS 562
             G  E  LK +  MR+  V +D+ S +  +SAA  +  +E G+QLH  +++ G ++   
Sbjct: 542 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSF 601

Query: 563 VKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAALSAFDNMRLAG 622
           + N+  D Y K G + +  K         + SWN LIS L  +G+     + F  M   G
Sbjct: 602 IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG 661

Query: 623 LKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVCVIDLHGRAGQLEKA 682
           +KP  +T +S+L+ACS GGLVD G+ Y+  +     +EPA++H +CVIDL GR+G+L +A
Sbjct: 662 IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEA 721

Query: 683 MEIVEGMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFYLLLASLYDEL 742
              +  MP + +  V+++LL++CK+H N+  G   A    +L+P D S Y+L ++++   
Sbjct: 722 ETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATT 781

Query: 743 DRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDMEEKLEFLRAEF 802
            R +     RK M  + ++K  + SWV+L  K+  F  GDR+HP+  ++  KLE ++   
Sbjct: 782 GRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLI 841

Query: 803 KSRGFLYG--------DDEDSCH----HSEKLALAFGLVSMPPKGVVRIMKNISICRECH 862
           K  G++          D+E   H    HSE+LALA+ L+S P    VRI KN+ IC +CH
Sbjct: 842 KESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCH 901

Query: 863 DFILLATKVVEREIVVRDGSRLHVFNNGSCSCKRY 877
                 ++V+ R IV+RD  R H F  G CSCK Y
Sbjct: 902 SVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDY 936

BLAST of CmoCh18G013100 vs. TAIR 10
Match: AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 461.8 bits (1187), Expect = 1.2e-129
Identity = 256/868 (29.49%), Postives = 459/868 (52.88%), Query Frame = 0

Query: 27  SICNSKSLKEGLCVHSPIIKLGLLGNLYLSNNLLSLYAKRFGLKQARNLFDEM-PDRDVV 86
           ++ +S +L E   +H+ +I LGL  + + S  L+  Y+       + ++F  + P ++V 
Sbjct: 13  ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72

Query: 87  SWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKLGSCVHGYA 146
            W ++  A+ ++G + +A E +  +     SP+++T  ++I++C+   + ++G  V+   
Sbjct: 73  LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132

Query: 147 IKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNMDDADTVTWTTMISSLVQAQKWAEAL 206
           +  GFES   +G  L+D+Y++      A + F  M   D V+W ++IS       + EAL
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192

Query: 207 QLYITMLESGVAPNEFTFTKLL-ATTSFMGLKYGKLLHSHLISLGVNLNVVLKTALVDMY 266
           ++Y  +  S + P+ FT + +L A  + + +K G+ LH   +  GVN  VV+   LV MY
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 252

Query: 267 SGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFLEMRMSGIPPHSFTYS 326
             ++    A +V ++   +D   + ++I  + +   V+E++  FLE  +    P   T S
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVS 312

Query: 327 SALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALINMYMKSDLIDDALRVFGSIATP 386
           S L AC  L  L L K I+  ++ AG   +    + LI++Y K   +  A  VF S+   
Sbjct: 313 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 372

Query: 387 SVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSSILGACKNQISM-----FH 446
             + W S+ISG  + G   +  + F  M     Q +  T   ++        +      H
Sbjct: 373 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLH 432

Query: 447 GYILKSMAYHDIVVGNALVDAYARSGMVDDARRVIRTMKHRDPITYTSLATRLNQMGDHE 506
              +KS    D+ V NAL+D YA+ G V D+ ++  +M   D +T+ ++ +   + GD  
Sbjct: 433 SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA 492

Query: 507 MALKTIDSMRADNVKMDEISLASLVSAATGVGTIEAGKQLHCYSLRYGLDNTRSVKNSLV 566
             L+    MR   V  D  +    +     +     GK++HC  LR+G ++   + N+L+
Sbjct: 493 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALI 552

Query: 567 DFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAALSAFDNMRLAGLKPDSI 626
           + Y K GCL+++ + FE ++  DVV+W G+I    + G    AL  F +M  +G+ PDS+
Sbjct: 553 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 612

Query: 627 TLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVCVIDLHGRAGQLEKAMEIVEG 686
             ++++ ACS  GLVD G+  F+ M+  + I+P ++HY CV+DL  R+ ++ KA E ++ 
Sbjct: 613 VFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQA 672

Query: 687 MPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFYLLLASLYDELDRPDLS 746
           MP + DA ++ ++L AC+   ++   E V+RR ++L+P D  + +L ++ Y  L + D  
Sbjct: 673 MPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKV 732

Query: 747 TKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDMEEKLEFLRAEFKSRGFL 806
           +  RK ++D+ + K+P  SW+E+   +HVF +GD S P+   + + LE L +     G++
Sbjct: 733 SLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYI 792

Query: 807 YGDDEDS-------------CHHSEKLALAFGLVSMPPKGVVRIMKNISICRECHDFILL 866
               E S             C HSE+LA+AFGL++  P   +++MKN+ +C +CH+   L
Sbjct: 793 PDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKL 852

Query: 867 ATKVVEREIVVRDGSRLHVFNNGSCSCK 875
            +K+V REI+VRD +R H+F +G+CSCK
Sbjct: 853 ISKIVGREILVRDANRFHLFKDGTCSCK 879

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FLX61.6e-24848.74Pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Arabidop... [more]
Q9SVP73.8e-14132.40Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... [more]
Q7Y2115.0e-13331.11Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
Q9SS601.7e-12829.49Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX... [more]
Q9ZUW32.2e-12832.93Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1G1W50.0e+00100.00pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Cucurbit... [more]
A0A6J1HYM30.0e+0097.15pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Cucurbit... [more]
A0A6J1CHG90.0e+0083.11pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Momordic... [more]
A0A7N2RAB80.0e+0060.32DYW_deaminase domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1[more]
A0A6P3ZHY34.7e-30759.73pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Ziziphus... [more]
Match NameE-valueIdentityDescription
AT5G52850.11.2e-24948.74Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G13650.12.7e-14232.40Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G57430.13.6e-13431.11Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G16480.16.3e-13130.97Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G03580.11.2e-12929.49Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 756..866
e-value: 2.9E-21
score: 75.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 657..680
e-value: 0.066
score: 13.5
coord: 556..579
e-value: 0.76
score: 10.2
coord: 159..181
e-value: 0.17
score: 12.2
coord: 455..480
e-value: 0.0023
score: 18.1
coord: 359..379
e-value: 0.91
score: 9.9
coord: 483..512
e-value: 0.21
score: 11.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 82..129
e-value: 3.9E-11
score: 43.0
coord: 283..330
e-value: 4.1E-8
score: 33.3
coord: 184..227
e-value: 5.2E-11
score: 42.6
coord: 581..628
e-value: 1.2E-8
score: 35.0
coord: 384..432
e-value: 2.2E-7
score: 30.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 287..318
e-value: 7.2E-5
score: 20.7
coord: 85..119
e-value: 3.8E-5
score: 21.6
coord: 387..420
e-value: 4.7E-5
score: 21.3
coord: 455..480
e-value: 5.9E-4
score: 17.8
coord: 186..220
e-value: 2.1E-7
score: 28.7
coord: 584..618
e-value: 1.4E-5
score: 22.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 83..117
score: 11.180584
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 385..419
score: 9.700809
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 582..616
score: 10.621557
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 284..318
score: 10.917512
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 450..484
score: 9.45966
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 184..218
score: 12.309597
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 233..333
e-value: 2.5E-14
score: 55.4
coord: 19..141
e-value: 6.7E-21
score: 77.0
coord: 552..789
e-value: 1.3E-32
score: 115.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 142..232
e-value: 6.8E-19
score: 69.9
coord: 335..437
e-value: 5.2E-17
score: 63.7
coord: 438..539
e-value: 1.1E-16
score: 62.7
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 116..432
coord: 235..534
coord: 513..773
coord: 22..330

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G013100.1CmoCh18G013100.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding