CmoCh18G011860 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G011860
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	F-box/kelch-repeat protein SKIP11-like
Location	Cmo_Chr18: 11907026 .. 11909965 (-)
RNA-Seq Expression	CmoCh18G011860
Synteny	CmoCh18G011860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCGCAGTGTATCAAACCTCCTTCAACACAAATTTACTGTGAGTGTGAGGTCCGTTAAATTTGACTTTGTGGAGGAAATTTTTTTAAATTTTACTTTTAACTCTATCCACCGCCGCCTCGACGGTGGCAGAGTACCGGAGAATTCTCTCTTCTTTATCTTCTCTGCGTACATACTGGACCGGACTGTACACAGTCGCCGGCACCCGCCGCCGTTGGAGGGCATACCAGCCGACTTCTGGAAAGGAGAAAGAAGGAAGAAAGTCGACGGGGAAGAAGTGGGACCCATTTCCGCCTTTTCCCGTGTTTTTATTTTTCGTGGGTTTGTTCAATAATTTAAGATCGGAAAGAGGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGACGAGAGAGAGAGAAGAATTTCAGAGCTCGAAAGCCAAAATCCAAAGCCTCCATTTCCATTTCCCAATTCCTTCCTTCATTCATTCATTTTCGCTCTGTTTTCTCTGATTTGCAGAGAGAATCCAGAGGACGAAGAACGCCAAAATCAGTGATACCAGTTCCTTGAGCTTTCTTTTCATTTTTTATAGTTTTCCCTTTGGAAAATTCCAATCCATATCCTGTTTCTGTCTTCTCTTATCCATTATTTAAGTAAGTTCCCCTTCTCACATTCTTTTTTATTGTTCATGTTCTTATGATTTCCTCTCATCCCATCTACTATTTCGTTTTCTCCTTGCTTGTTTCCAATTAGTACATAATTTAATTGTGATTATACCCTTGTTCTAACCAGATCTCTCCATTGATTTTCGCTATTGGGAAGATGGGTAGATTTTGATTTCTTGGTTTCTTGGTTTCTTCAATTGTTATTGGATTTTTCTGGGTTCTATACAGATTTTGAGATCCGTTTTGTTTCTTTTTCTATTTCATTTGAAGAGTGCAGCCGCAAGCTTGTCAGTTCATCCTCTCTGTTCGTGTTTTTTGTTTCCCCCAATTGTTGGTGTTTTGATTTCTGGGTCCAGTTTTTCGGCATTGTGTTATTGATTATTTATTACAATTGAGATTATGGGTTTGGTGAATTCGGTGCGAGAATTTTTCATTTGTTTATTAGTTAATACTTCAAAAGTTCCTGGAATTTTTAGATACTTTTTTTACCCATCTCGGTTGCCATAGCTCTCTCTCGGTTATTTCACGATCTGGGGTTGCAAAAGTTAGGTTTTAAATCTGTGGGTTTCTTTTCTTTTTGATTAGGAAAGAGAAGGCAACATCGGATCGGATTGGTATTCTGAAATTTCTCCGTTTTTATTGGTTGCATCTGAGAGAGATATGTTGGAGGATCGCTCCTTCCTGGCGTCGAGGGTGTTCTCAAGCTCTTGCCAGCACGAAACTCAGTGGCCTTGCTTTAACTTAACTTATTGCCTCGAGGCCGGAATGGGAAACGGTAAGCGCCCATCAGATCATGATGCTGATGAACTTCATAGAAACGTCAGGCCTCGATCTTCATGGGATTCTGGCGACAGTTCTGATTCGGGCTCTCTAATCTCTTCCATTGGCAGAGACAACTCTATTAACTGCTTAATTCGCTGCTCCAGGTCGGATTATGGTTCTCTAGCATCGTTGAATCGAAGTTTTCGCTCGTTAATTCGTTCCGGGGAGCTTTACAAACTGAGGCGTTTGAATGATGTGATTGAACATTGGGTTTATTTCTCTTGTCATCTTCTTGAATGGGAAGCTTTCGATCCAATTCAGCGCAGATGGATGCATCTGCCCAGAATGGATTTTAATGAATGCTTCATGTGTTCTGATAAGGAATCCTTAGGAGTGGGGACTGACCTTCTTGTTTTTGGTAAGGATTTGAACTCCCATGTCACATATAGATACAGTATATTGACAAATTCCTGGTGTCCTGGGGTTAGTATGAATGACCCCAGATGCTTGTTTGGGTCTGCTAGCAGAGGAGAGATAGCAATTCTAGCAGGTGGGTGTGATTCAAATGGCAACATACTCAGCTCAGCTGAGCTCTACAACTCCGAGACTAAAACATGGGTGACCCTTCCAAATATGACCAAACCCAGAAAGCTCTGTTCTGGGGTTTTCATGGACAAGAAATTCTACGTCATTGGTGGAGTGGGAGGAAGTGAAGCTAGGGTTCTTACATGCGGGGAAGAGTACGATTTAGACACTGGAAAATGGACTGAAATCCCCAACATGTCGCCTGGGCGGAGTGGTGCAGGTAGGGAGGGTGATATGCCAGCAGCAGCTGAAGCGCCGCCTCTTCTTGCTGTGGTGAATGATGAACTGTATGCTGCAGATCACGCTGAGATGGAGGTTAGGAAGTATGACAAAGTGAGAAGGACATGGTTTACTGTTGGGAGGTTGCCTGAACGAGCTGTATCAACGAATGGTTGGGGGCTTGCGTTTAGAGCATGTGGAGATAGGCTGATTGTAATTGGTGGACCGAGGGCGATGGGGGAAGGGTATATAGAGCTGAACTCATGGGTGCCAAGTGAAGGCCCTCCAAGGTGGGATTTGCTTGCGAGGAAGTCATCTGCTAGCTTTGTGTATAACTGTGCTGTGATGGGATGCTAAAACCAAGCAAGCCAAACCAAACCAAACCACTGCTGAAGATGGGTTTGTTCTTCTCTGTTCTTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACAGATGATATATATTGTAGGTGATGAGTTATTTCCCATGCTCTCTTTACATATTTTCAACCATTGCTTAGGGAGGTGTGGGGAGAGGAGTTGATTTTACTCTCAACATCTTACAGAAATTTTTTCATGGAAGAATAGTTTATATATATATATATCATTCATTCTCATTCATTCTTCCATTGAAACTGCATCCCAATTACTGGGTTTCGATTGATTTGTTGTTTAGAACGGTTATTGTTCCCAATAATTTGAAGATTCATAGCTCACTCACTG

mRNA sequence

ATGGTGCGCAGTGTATCAAACCTCCTTCAACACAAATTTACTGTGAGTGTGAGGTCCGTTAAATTTGACTTTGTGGAGGAAATTTTTTTAAATTTTACTTTTAACTCTATCCACCGCCGCCTCGACGGTGGCAGAGTACCGGAGAATTCTCTCTTCTTTATCTTCTCTGCGTACATACTGGACCGGACTGTACACAGTCGCCGGCACCCGCCGCCGTTGGAGGGCATACCAGCCGACTTCTGGAAAGGAGAAAGAAGGAAGAAAGTCGACGGGGAAGAAGTGGGACCCATTTCCGCCTTTTCCCGTATCGGAAAGAGGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGACGAGAGAGAGAGAAGAATTTCAGAGCTCGAAAGCCAAAATCCAAAGCCTCCATTTCCATTTCCCAATTCCTTCCTTCATTCATTCATTTTCGCTCTGTTTTCTCTGATTTGCAGAGAGAATCCAGAGGACGAAGAACGCCAAAATCAGTGATACCAGAAAGAGAAGGCAACATCGGATCGGATTGGTATTCTGAAATTTCTCCGTTTTTATTGGTTGCATCTGAGAGAGATATGTTGGAGGATCGCTCCTTCCTGGCGTCGAGGGTGTTCTCAAGCTCTTGCCAGCACGAAACTCAGTGGCCTTGCTTTAACTTAACTTATTGCCTCGAGGCCGGAATGGGAAACGGTAAGCGCCCATCAGATCATGATGCTGATGAACTTCATAGAAACGTCAGGCCTCGATCTTCATGGGATTCTGGCGACAGTTCTGATTCGGGCTCTCTAATCTCTTCCATTGGCAGAGACAACTCTATTAACTGCTTAATTCGCTGCTCCAGGTCGGATTATGGTTCTCTAGCATCGTTGAATCGAAGTTTTCGCTCGTTAATTCGTTCCGGGGAGCTTTACAAACTGAGGCGTTTGAATGATGTGATTGAACATTGGGTTTATTTCTCTTGTCATCTTCTTGAATGGGAAGCTTTCGATCCAATTCAGCGCAGATGGATGCATCTGCCCAGAATGGATTTTAATGAATGCTTCATGTGTTCTGATAAGGAATCCTTAGGAGTGGGGACTGACCTTCTTGTTTTTGGTAAGGATTTGAACTCCCATGTCACATATAGATACAGTATATTGACAAATTCCTGGTGTCCTGGGGTTAGTATGAATGACCCCAGATGCTTGTTTGGGTCTGCTAGCAGAGGAGAGATAGCAATTCTAGCAGGTGGGTGTGATTCAAATGGCAACATACTCAGCTCAGCTGAGCTCTACAACTCCGAGACTAAAACATGGGTGACCCTTCCAAATATGACCAAACCCAGAAAGCTCTGTTCTGGGGTTTTCATGGACAAGAAATTCTACGTCATTGGTGGAGTGGGAGGAAGTGAAGCTAGGGTTCTTACATGCGGGGAAGAGTACGATTTAGACACTGGAAAATGGACTGAAATCCCCAACATGTCGCCTGGGCGGAGTGGTGCAGGTAGGGAGGGTGATATGCCAGCAGCAGCTGAAGCGCCGCCTCTTCTTGCTGTGGTGAATGATGAACTGTATGCTGCAGATCACGCTGAGATGGAGGTTAGGAAGTATGACAAAGTGAGAAGGACATGGTTTACTGTTGGGAGGTTGCCTGAACGAGCTGTATCAACGAATGGTTGGGGGCTTGCGTTTAGAGCATGTGGAGATAGGCTGATTGTAATTGGTGGACCGAGGGCGATGGGGGAAGGGTATATAGAGCTGAACTCATGGGTGCCAAGTGAAGGCCCTCCAAGGTGGGATTTGCTTGCGAGGAAGTCATCTGCTAGCTTTGTGTATAACTGTGCTGTGATGGGATGCTAAAACCAAGCAAGCCAAACCAAACCAAACCACTGCTGAAGATGGGTTTGTTCTTCTCTGTTCTTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACAGATGATATATATTGTAGGTGATGAGTTATTTCCCATGCTCTCTTTACATATTTTCAACCATTGCTTAGGGAGGTGTGGGGAGAGGAGTTGATTTTACTCTCAACATCTTACAGAAATTTTTTCATGGAAGAATAGTTTATATATATATATATCATTCATTCTCATTCATTCTTCCATTGAAACTGCATCCCAATTACTGGGTTTCGATTGATTTGTTGTTTAGAACGGTTATTGTTCCCAATAATTTGAAGATTCATAGCTCACTCACTG

Coding sequence (CDS)

ATGGTGCGCAGTGTATCAAACCTCCTTCAACACAAATTTACTGTGAGTGTGAGGTCCGTTAAATTTGACTTTGTGGAGGAAATTTTTTTAAATTTTACTTTTAACTCTATCCACCGCCGCCTCGACGGTGGCAGAGTACCGGAGAATTCTCTCTTCTTTATCTTCTCTGCGTACATACTGGACCGGACTGTACACAGTCGCCGGCACCCGCCGCCGTTGGAGGGCATACCAGCCGACTTCTGGAAAGGAGAAAGAAGGAAGAAAGTCGACGGGGAAGAAGTGGGACCCATTTCCGCCTTTTCCCGTATCGGAAAGAGGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGACGAGAGAGAGAGAAGAATTTCAGAGCTCGAAAGCCAAAATCCAAAGCCTCCATTTCCATTTCCCAATTCCTTCCTTCATTCATTCATTTTCGCTCTGTTTTCTCTGATTTGCAGAGAGAATCCAGAGGACGAAGAACGCCAAAATCAGTGATACCAGAAAGAGAAGGCAACATCGGATCGGATTGGTATTCTGAAATTTCTCCGTTTTTATTGGTTGCATCTGAGAGAGATATGTTGGAGGATCGCTCCTTCCTGGCGTCGAGGGTGTTCTCAAGCTCTTGCCAGCACGAAACTCAGTGGCCTTGCTTTAACTTAACTTATTGCCTCGAGGCCGGAATGGGAAACGGTAAGCGCCCATCAGATCATGATGCTGATGAACTTCATAGAAACGTCAGGCCTCGATCTTCATGGGATTCTGGCGACAGTTCTGATTCGGGCTCTCTAATCTCTTCCATTGGCAGAGACAACTCTATTAACTGCTTAATTCGCTGCTCCAGGTCGGATTATGGTTCTCTAGCATCGTTGAATCGAAGTTTTCGCTCGTTAATTCGTTCCGGGGAGCTTTACAAACTGAGGCGTTTGAATGATGTGATTGAACATTGGGTTTATTTCTCTTGTCATCTTCTTGAATGGGAAGCTTTCGATCCAATTCAGCGCAGATGGATGCATCTGCCCAGAATGGATTTTAATGAATGCTTCATGTGTTCTGATAAGGAATCCTTAGGAGTGGGGACTGACCTTCTTGTTTTTGGTAAGGATTTGAACTCCCATGTCACATATAGATACAGTATATTGACAAATTCCTGGTGTCCTGGGGTTAGTATGAATGACCCCAGATGCTTGTTTGGGTCTGCTAGCAGAGGAGAGATAGCAATTCTAGCAGGTGGGTGTGATTCAAATGGCAACATACTCAGCTCAGCTGAGCTCTACAACTCCGAGACTAAAACATGGGTGACCCTTCCAAATATGACCAAACCCAGAAAGCTCTGTTCTGGGGTTTTCATGGACAAGAAATTCTACGTCATTGGTGGAGTGGGAGGAAGTGAAGCTAGGGTTCTTACATGCGGGGAAGAGTACGATTTAGACACTGGAAAATGGACTGAAATCCCCAACATGTCGCCTGGGCGGAGTGGTGCAGGTAGGGAGGGTGATATGCCAGCAGCAGCTGAAGCGCCGCCTCTTCTTGCTGTGGTGAATGATGAACTGTATGCTGCAGATCACGCTGAGATGGAGGTTAGGAAGTATGACAAAGTGAGAAGGACATGGTTTACTGTTGGGAGGTTGCCTGAACGAGCTGTATCAACGAATGGTTGGGGGCTTGCGTTTAGAGCATGTGGAGATAGGCTGATTGTAATTGGTGGACCGAGGGCGATGGGGGAAGGGTATATAGAGCTGAACTCATGGGTGCCAAGTGAAGGCCCTCCAAGGTGGGATTTGCTTGCGAGGAAGTCATCTGCTAGCTTTGTGTATAACTGTGCTGTGATGGGATGCTAA

Protein sequence

MVRSVSNLLQHKFTVSVRSVKFDFVEEIFLNFTFNSIHRRLDGGRVPENSLFFIFSAYILDRTVHSRRHPPPLEGIPADFWKGERRKKVDGEEVGPISAFSRIGKRKKKKKKKRRRRRREREKNFRARKPKSKASISISQFLPSFIHFRSVFSDLQRESRGRRTPKSVIPEREGNIGSDWYSEISPFLLVASERDMLEDRSFLASRVFSSSCQHETQWPCFNLTYCLEAGMGNGKRPSDHDADELHRNVRPRSSWDSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARVLTCGEEYDLDTGKWTEIPNMSPGRSGAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC

Homology

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BLAST of CmoCh18G011860 vs. ExPASy Swiss-Prot
Match: Q8L736 (F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana OX=3702 GN=SKIP11 PE=1 SV=2)

HSP 1 Score: 558.9 bits (1439), Expect = 7.1e-158
Identity = 263/362 (72.65%), Postives = 306/362 (84.53%), Query Frame = 0


Query: 256 DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 315
           + GDSSDS SLI+ IGRDNSI+CLIRCSRSDYGS+ASLNR+FRSL++SGE+Y+LRR N  
Sbjct: 107 NGGDSSDSHSLINEIGRDNSIDCLIRCSRSDYGSIASLNRNFRSLVKSGEIYRLRRQNGF 166

Query: 316 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGK-DLNS 375
           +EHWVYFSC LLEW AFDP++RRWM LP M  +  FMC+DKESL VGTDLLV GK D +S
Sbjct: 167 VEHWVYFSCQLLEWVAFDPVERRWMQLPTMPSSVTFMCADKESLAVGTDLLVLGKDDFSS 226

Query: 376 HVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKT 435
           HV YRYS+LTNSW  G+ MN PRCLFGSAS GEIAI AGGCDS G IL  AE+YNSE +T
Sbjct: 227 HVIYRYSLLTNSWSSGMKMNSPRCLFGSASLGEIAIFAGGCDSQGKILDFAEMYNSELQT 286

Query: 436 WVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARVLTCGEEYDLDTGKWTEIPNMSPGR 495
           W+TLP M KPRK+CSGVFMD KFYVIGG+GG++++ LTCGEEYDL+T KWT+IP++SP R
Sbjct: 287 WITLPRMNKPRKMCSGVFMDGKFYVIGGIGGADSKGLTCGEEYDLETKKWTQIPDLSPPR 346

Query: 496 SGAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTN 555
           S A  + DM  AAEAPPL+AVVN++LYAADHA+MEVRKYDK  + W TVGRLPERA S N
Sbjct: 347 SRAD-QADMSPAAEAPPLVAVVNNQLYAADHADMEVRKYDKENKKWLTVGRLPERAGSVN 406

Query: 556 GWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSE-GPPRWDLLARKSSASFVYNCAVM 615
           GWGLAFRACG+RLIVIGGP+  G G+IELNSW+PS+ GPP+W LL RK S +FVYNCAVM
Sbjct: 407 GWGLAFRACGERLIVIGGPKCSGGGFIELNSWIPSDGGPPQWTLLDRKHSPTFVYNCAVM 466

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BLAST of CmoCh18G011860 vs. ExPASy Swiss-Prot
Match: Q84M94 (F-box/kelch-repeat protein At1g26930 OS=Arabidopsis thaliana OX=3702 GN=At1g26930 PE=2 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 3.5e-149
Identity = 267/425 (62.82%), Postives = 316/425 (74.35%), Query Frame = 0


Query: 201 SFLASRVFSSSCQHETQWPCFNLTYCLEAGMGNGKRP-SDHDADELHRNVRPRSSWDS-- 260
           S L S +F+     ET+W          + + +GKR   ++D  +LH     + + DS  
Sbjct: 9   SCLVSTLFTMPSHKETKW----------SFLVSGKRSFLNNDESDLHFKKMYKLTTDSSE 68

Query: 261 ----GDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLN 320
               G SSDSG+LI  + RD+S++CLIRCSR+DY S+AS+NRS RSLIRSGE+Y+LRRL 
Sbjct: 69  GEDNGSSSDSGTLIPGMNRDDSLSCLIRCSRADYCSIASVNRSLRSLIRSGEIYRLRRLQ 128

Query: 321 DVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLN 380
             +EHWVYFSCHL EWEAFDP  +RWMHLP M  NECF  +DKESL VGTDLLVFG +++
Sbjct: 129 GTLEHWVYFSCHLNEWEAFDPRSKRWMHLPSMPQNECFRYADKESLAVGTDLLVFGWEVS 188

Query: 381 SHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETK 440
           S+V YRYS+LTNSW    SMN PRCLFGSAS GEIA+LAGGCDS+G IL +AELYN E +
Sbjct: 189 SYVIYRYSLLTNSWSTAKSMNMPRCLFGSASYGEIAVLAGGCDSSGRILDTAELYNYEDQ 248

Query: 441 TWVTLPNMTKPRKLCSGVFMDKKFYVIGGVG---GSEARVLTCGEEYDLDTGKWTEIPNM 500
           TW+ LP M K RK+CSGVFMD KFYVIGG+G    +E +VLTCGEE+DL T KWTEIP M
Sbjct: 249 TWLVLPGMNKRRKMCSGVFMDGKFYVIGGIGVGEENEPKVLTCGEEFDLKTRKWTEIPEM 308

Query: 501 SPGRSGAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERA 560
           SP RS  G    M AAA APPL+AVVND+LYAADHA M VR+YDK +R W  VG LPE+A
Sbjct: 309 SPPRSNQG--NGMSAAAMAPPLVAVVNDQLYAADHAGMAVRRYDKEKRVWNKVGNLPEQA 368

Query: 561 VSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNC 616
            S NGWGLAFRACGDR+IVIGGP+A GEG+IELNSWVPS   P W LL +K S +FVYNC
Sbjct: 369 GSMNGWGLAFRACGDRIIVIGGPKAPGEGFIELNSWVPSVTTPEWHLLGKKQSVNFVYNC 421

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BLAST of CmoCh18G011860 vs. ExPASy Swiss-Prot
Match: Q9CA63 (F-box/kelch-repeat protein At1g74510 OS=Arabidopsis thaliana OX=3702 GN=At1g74510 PE=2 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 4.5e-136
Identity = 245/453 (54.08%), Postives = 312/453 (68.87%), Query Frame = 0


Query: 196 MLEDRSFLASRVFSSSCQHETQWPCFNLTYCLEAGM-----------GNGKRPS---DH- 255
           MLE  S+L SR   SSC+ E++W  +N    L+  +           G+  +     DH 
Sbjct: 1   MLEAPSYLVSRDLPSSCEEESKW-IYNAHCVLQLSLRKRLLDDTDVEGSSAKKMLRVDHG 60

Query: 256 ---DADELHRNVRPRSSWDSGDSSDSG-------SLISSIGRDNSINCLIRCSRSDYGSL 315
              ++D++  +++   ++ S + S  G       S ++ + ++  +NCL  CS SD+GS+
Sbjct: 61  SRGESDKITDSLQLAKTYQSSNQSQQGGGGDQQSSPVTRLDQNALLNCLAHCSLSDFGSI 120

Query: 316 ASLNRSFRSLIRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNEC 375
           AS NR+FRSLI+  ELY+LRR   ++EHW+YFSC LLEWEA+DP   RW+ +P+M FNEC
Sbjct: 121 ASTNRTFRSLIKDSELYRLRRAKGIVEHWIYFSCRLLEWEAYDPNGDRWLRVPKMTFNEC 180

Query: 376 FMCSDKESLGVGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAI 435
           FMCSDKESL VGT+LLVFGK++ SHV YRYSILTN+W  G+ MN PRCLFGSAS GEIA+
Sbjct: 181 FMCSDKESLAVGTELLVFGKEIMSHVIYRYSILTNTWTSGMQMNVPRCLFGSASLGEIAV 240

Query: 436 LAGGCDSNGNILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARV 495
           +AGGCD  G ILSSAELYNSET  W  +P+M K RK+CS VFMD  FY IGG+G   +++
Sbjct: 241 IAGGCDPRGRILSSAELYNSETGEWTVIPSMNKARKMCSSVFMDGNFYCIGGIGEGNSKM 300

Query: 496 LTCGEEYDLDTGKWTEIPNMSPGRSGAGREGDM-------PAAAEAPPLLAVVNDELYAA 555
           L CGE YDL    WT IPNM P RS  G  GD         AA+EAPPL+AVV DELYAA
Sbjct: 301 LLCGEVYDLKKKTWTLIPNMLPERSSGG-GGDQAKEIAAATAASEAPPLVAVVKDELYAA 360

Query: 556 DHAEMEVRKYDKVRRTWFTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIEL 615
           ++A+ EV+KYDK    W  VG LPERA S NGWG+AFRACGD+L+V+GGPRA+G G+IE+
Sbjct: 361 NYAQQEVKKYDKRLNVWNKVGNLPERASSMNGWGMAFRACGDQLVVVGGPRAIGGGFIEI 420

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BLAST of CmoCh18G011860 vs. ExPASy Swiss-Prot
Match: Q9FKJ0 (F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana OX=3702 GN=At5g60570 PE=2 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.2e-87
Identity = 169/359 (47.08%), Postives = 227/359 (63.23%), Query Frame = 0


Query: 263 SGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDVIEHWVYF 322
           S S++  +  D ++NCL    RSDY SL+ +N+ +  LI SG L+ LR+   ++E+ V+ 
Sbjct: 46  SDSVLPGLIDDVALNCLAWVPRSDYPSLSCVNKKYNKLINSGHLFALRKELGIVEYLVFM 105

Query: 323 SCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSHVTYRYSI 382
            C    W  F P++++WM LP+M  +ECF  +DKESL V  +LLVFG++L     ++YS+
Sbjct: 106 VCDPRGWLMFSPMKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYSL 165

Query: 383 LTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTWVTLPNMT 442
            +  W     M+ PRCLF S S G IAI+AGG D NGNIL+SAELY+S +  W  LPNM 
Sbjct: 166 RSRCWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSGRWEMLPNMH 225

Query: 443 KPRKLCSGVFMDKKFYVIGGVGGSEARVLTCGEEYDLDTGKWTEIPNMSPGRSGAGREGD 502
            PR+LCSG FMD KFYVIGG+      V T GEE+DL+T KW +I  M P         +
Sbjct: 226 SPRRLCSGFFMDGKFYVIGGMSSPNVSV-TFGEEFDLETRKWRKIEGMYP---------N 285

Query: 503 MPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTNGWGLAFRA 562
           +  AA+APPL+ VVN+EL+  +++   V+KYDKV+  W  +GRLP    S+NGWGLAF+ 
Sbjct: 286 VNRAAQAPPLVVVVNNELFTLEYSTNMVKKYDKVKNKWEVMGRLPPMVDSSNGWGLAFKP 345

Query: 563 CGDRLIVIGGPRA-MGEGYIELNSWVPSEGPP----RWDLLARKSSAS-FVYNCAVMGC 616
           CGD+L+V  G R   GEG I +NSW P  G       W +L  K +   FVYNCAVMGC
Sbjct: 346 CGDQLLVFCGQRGPHGEG-IVVNSWCPKSGAKDGNLDWKVLGVKENVGVFVYNCAVMGC 393

[Close]

BLAST of CmoCh18G011860 vs. ExPASy Swiss-Prot
Match: Q9LI89 (F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana OX=3702 GN=At3g27150 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 3.0e-55
Identity = 136/395 (34.43%), Postives = 198/395 (50.13%), Query Frame = 0


Query: 248 NVRPRSSWDSGDSSDSGSLISS-----------------IGRDNSINCLIRCSRSDYGSL 307
           NV P   WD  ++ ++   +SS                 +  +  +  L R  R +Y  L
Sbjct: 35  NVEPSLDWDGEETGEATKALSSTCLKPKDADYCLLNVPQLVYELEVEILARVPRFEYWKL 94

Query: 308 ASLNRSFRSLIRSGELYKLRRLNDVIEHWVY-FSCHLLEWEAFDPIQRRWMHLPRMDFNE 367
             LN+ F  L++S E++K+RR   V+E  V+  S     W  FD        LP +  + 
Sbjct: 95  KLLNKGFSRLLKSDEIFKVRRERGVVEPSVFMLSSGDTCWTMFDKGFGNCQKLPELPSDI 154

Query: 368 CFMCSDKESLGVGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIA 427
           CF+  DKESL  GT L+V GK+  S   +RY + T+ W  G +M  PR LF SA+ G + 
Sbjct: 155 CFLHGDKESLCAGTHLIVTGKEEKSIALWRYELETSKWFKGPAMITPRILFASATCGTVV 214

Query: 428 ILAGGCDSNGN----ILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGG 487
            +AGG    GN    ++ S E Y+S+TKTW  L  M K RK CSG ++  KFYV+GG   
Sbjct: 215 FVAGGLKIEGNGTMEVVDSVEKYDSKTKTWTLLRGMHKRRKFCSGCYLRGKFYVLGG-RD 274

Query: 488 SEARVLTCGEEYDLDTGKWTEIPNMSPGRSGAGREGDMPAAAEAPPLLAVVNDELYAADH 547
              + LTCGE YD  T  W  IP++    S         ++ ++PPL+AVV D+LY+ + 
Sbjct: 275 ENGQNLTCGESYDEKTNTWELIPDILKDMSF--------SSVQSPPLIAVVGDDLYSLET 334

Query: 548 AEMEVRKYDKVRRTWFTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEG-YIELN 607
           +  E+R YD    +W  +G +P RA S  GWG+AF++ GD+L+VIG          + + 
Sbjct: 335 SANELRVYDANANSWKKLGDVPVRAKSNGGWGVAFKSLGDKLLVIGASAGPSRAETMSVY 394

Query: 608 SWVPSEGPPR---WDLLARKSSA---SFVYNCAVM 614
           +  PS  P     W+   R        F+ NC VM
Sbjct: 395 TSRPSANPANKLYWEESKRCCGVRFNHFILNCCVM 420

[Close]

BLAST of CmoCh18G011860 vs. ExPASy TrEMBL
Match: A0A6J1G1B1 (F-box/kelch-repeat protein SKIP11-like OS=Cucurbita moschata OX=3662 GN=LOC111449766 PE=4 SV=1)

HSP 1 Score: 882.9 bits (2280), Expect = 7.9e-253
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 196 MLEDRSFLASRVFSSSCQHETQWPCFNLTYCLEAGMGNGKRPSDHDADELHRNVRPRSSW 255
           MLEDRSFLASRVFSSSCQHETQWPCFNLTYCLEAGMGNGKRPSDHDADELHRNVRPRSSW
Sbjct: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYCLEAGMGNGKRPSDHDADELHRNVRPRSSW 60

Query: 256 DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 315
           DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV
Sbjct: 61  DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 120

Query: 316 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH 375
           IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH
Sbjct: 121 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH 180

Query: 376 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 435
           VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW
Sbjct: 181 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 240

Query: 436 VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARVLTCGEEYDLDTGKWTEIPNMSPGRS 495
           VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARVLTCGEEYDLDTGKWTEIPNMSPGRS
Sbjct: 241 VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARVLTCGEEYDLDTGKWTEIPNMSPGRS 300

Query: 496 GAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTNG 555
           GAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTNG
Sbjct: 301 GAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTNG 360

Query: 556 WGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC 615
           WGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC
Sbjct: 361 WGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC 420

[Close]

BLAST of CmoCh18G011860 vs. ExPASy TrEMBL
Match: A0A6J1HTC3 (F-box/kelch-repeat protein SKIP11-like OS=Cucurbita maxima OX=3661 GN=LOC111467619 PE=4 SV=1)

HSP 1 Score: 865.1 bits (2234), Expect = 1.7e-247
Identity = 413/420 (98.33%), Postives = 414/420 (98.57%), Query Frame = 0


Query: 196 MLEDRSFLASRVFSSSCQHETQWPCFNLTYCLEAGMGNGKRPSDHDADELHRNVRPRSSW 255
           MLEDRSFLASRVFSSSCQHETQWPCFNLTY LEAGMGNGKRPSDHDADELHRNVRPRSSW
Sbjct: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADELHRNVRPRSSW 60

Query: 256 DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 315
           DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV
Sbjct: 61  DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 120

Query: 316 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH 375
           IEHWVYFSCHLLEWEAFDP QRRWMHLPRMD NECFMCSDKESLGVGTDLLVFGKDLNSH
Sbjct: 121 IEHWVYFSCHLLEWEAFDPNQRRWMHLPRMDSNECFMCSDKESLGVGTDLLVFGKDLNSH 180

Query: 376 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 435
           VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW
Sbjct: 181 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 240

Query: 436 VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARVLTCGEEYDLDTGKWTEIPNMSPGRS 495
           VTLPNM KPRKLCSGVFMDKKFYVIGGVGGSEA+VLTCGEEYDLDTGKWTEIPNMSPGRS
Sbjct: 241 VTLPNMAKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRS 300

Query: 496 GAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTNG 555
           GA REGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTNG
Sbjct: 301 GAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTNG 360

Query: 556 WGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC 615
           WGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLARK SASFVYNCAVMGC
Sbjct: 361 WGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLARKPSASFVYNCAVMGC 420

[Close]

BLAST of CmoCh18G011860 vs. ExPASy TrEMBL
Match: A0A5D3D261 (F-box/kelch-repeat protein SKIP11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00590 PE=4 SV=1)

HSP 1 Score: 790.4 bits (2040), Expect = 5.3e-225
Identity = 383/435 (88.05%), Postives = 396/435 (91.03%), Query Frame = 0


Query: 196 MLEDRSFLASRVFSSSCQHETQWPCFNLTYCLEAGMGNGKRPSDHDADEL-------HRN 255
           MLEDRSFLASRVFSSSC  E QWPCFNLTY LE GM NGKRPSDHD ++         RN
Sbjct: 1   MLEDRSFLASRVFSSSCHQENQWPCFNLTYRLEVGMANGKRPSDHDGEDFVKTSSSYGRN 60

Query: 256 VRPRSS--------WDSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSL 315
           VRPRSS         DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGS+ASLNRSFR L
Sbjct: 61  VRPRSSRDHHPNDESDSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSIASLNRSFRKL 120

Query: 316 IRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLG 375
           IR+GELYKLRRLN VIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMD NECFMCSDKESLG
Sbjct: 121 IRNGELYKLRRLNGVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDSNECFMCSDKESLG 180

Query: 376 VGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGN 435
           VGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSAS+GEIAILAGGCDSNGN
Sbjct: 181 VGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASKGEIAILAGGCDSNGN 240

Query: 436 ILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARVLTCGEEYDLD 495
           IL++AELYNSETKTWVTLPNM KPRKLCSGVFMDKKFYVIGGVGGSEA VLTCGEEYDL+
Sbjct: 241 ILNTAELYNSETKTWVTLPNMIKPRKLCSGVFMDKKFYVIGGVGGSEANVLTCGEEYDLE 300

Query: 496 TGKWTEIPNMSPGRSGAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTW 555
           T KWTEIPNMSPGRS A R+ +MPAAAEAPPLLAVVN+ELYAADH +MEVRKYDK RR W
Sbjct: 301 TRKWTEIPNMSPGRSAAARDTEMPAAAEAPPLLAVVNNELYAADHTDMEVRKYDKQRREW 360

Query: 556 FTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLAR 615
            TVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLAR
Sbjct: 361 NTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLAR 420

[Close]

BLAST of CmoCh18G011860 vs. ExPASy TrEMBL
Match: A0A0A0KVW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604950 PE=4 SV=1)

HSP 1 Score: 788.9 bits (2036), Expect = 1.6e-224
Identity = 382/435 (87.82%), Postives = 396/435 (91.03%), Query Frame = 0


Query: 196 MLEDRSFLASRVFSSSCQHETQWPCFNLTYCLEAGMGNGKRPSDHDADEL-------HRN 255
           MLEDRSFLASRVFSSSC  E QW CFNLTY LE GMGNGKRPSDHD ++         RN
Sbjct: 1   MLEDRSFLASRVFSSSCHQENQWACFNLTYRLEVGMGNGKRPSDHDGEDFVKTSSSYGRN 60

Query: 256 VRPRSSW--------DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSL 315
           VRPRSS         DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGS+ASLNRSFR L
Sbjct: 61  VRPRSSTDHHPNDESDSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSIASLNRSFRKL 120

Query: 316 IRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLG 375
           IR+GELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMD NECFMCSDKESLG
Sbjct: 121 IRNGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDSNECFMCSDKESLG 180

Query: 376 VGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGN 435
           VGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSAS+GEIAILAGGCDSNGN
Sbjct: 181 VGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASKGEIAILAGGCDSNGN 240

Query: 436 ILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARVLTCGEEYDLD 495
           IL++AELYNSETKTWVTLPNM KPRKLCSGVFMDKKFYVIGGVGGSEA VLTCGEEYDL+
Sbjct: 241 ILNTAELYNSETKTWVTLPNMIKPRKLCSGVFMDKKFYVIGGVGGSEANVLTCGEEYDLE 300

Query: 496 TGKWTEIPNMSPGRSGAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTW 555
           T KWTEIPNMSPGRS A R+ +M AAAEAPPLLAVVN+ELYAADH +MEVRKYDK RR W
Sbjct: 301 TRKWTEIPNMSPGRSAAARDPEMRAAAEAPPLLAVVNNELYAADHTDMEVRKYDKQRREW 360

Query: 556 FTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLAR 615
            T+GRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLAR
Sbjct: 361 NTIGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLAR 420

[Close]

BLAST of CmoCh18G011860 vs. ExPASy TrEMBL
Match: A0A6J1DE00 (F-box/kelch-repeat protein SKIP11 OS=Momordica charantia OX=3673 GN=LOC111019206 PE=4 SV=1)

HSP 1 Score: 784.3 bits (2024), Expect = 3.8e-223
Identity = 384/438 (87.67%), Postives = 400/438 (91.32%), Query Frame = 0


Query: 196 MLEDRSFLASRVFSSSCQHETQWPCFNLTYCLEAGMGNGKRP--SDHDADEL-------H 255
           MLEDRSF+ASRVFSSSCQ ETQW  FN TY LE GMGNGKRP  SDH AD+L        
Sbjct: 1   MLEDRSFVASRVFSSSCQQETQWAYFNFTYRLEVGMGNGKRPSESDHHADDLPKTSSSCS 60

Query: 256 RNVRPRSS---------WDSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSF 315
           RNVRPRSS          DSGD+SDSGSLISSIGRDNSINCLIRCSRSDYGS+ASL+R+F
Sbjct: 61  RNVRPRSSRDHPNHPSDSDSGDASDSGSLISSIGRDNSINCLIRCSRSDYGSIASLSRTF 120

Query: 316 RSLIRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKE 375
           RSLIRSGELYKLRRLN VIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMD NECFMCSDKE
Sbjct: 121 RSLIRSGELYKLRRLNGVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDSNECFMCSDKE 180

Query: 376 SLGVGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDS 435
           SLGVGTDLLVFGKDLNSHVTYRYSILTNSW PGVSMNDPRCLFGSAS+GEIAILAGGCDS
Sbjct: 181 SLGVGTDLLVFGKDLNSHVTYRYSILTNSWSPGVSMNDPRCLFGSASQGEIAILAGGCDS 240

Query: 436 NGNILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARVLTCGEEY 495
           NGNIL+SAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSE++VLTCGEEY
Sbjct: 241 NGNILNSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSESKVLTCGEEY 300

Query: 496 DLDTGKWTEIPNMSPGRSGAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVR 555
           DL+T KWTEIPNMSPGR+ A R+GDMPAAAEAPPLLAVVN+ELYAADH +MEVRKYDK R
Sbjct: 301 DLETRKWTEIPNMSPGRNAAARDGDMPAAAEAPPLLAVVNNELYAADHTDMEVRKYDKRR 360

Query: 556 RTWFTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDL 615
           R W TVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDL
Sbjct: 361 REWSTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDL 420

[Close]

BLAST of CmoCh18G011860 vs. TAIR 10
Match: AT1G14330.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 577.4 bits (1487), Expect = 1.4e-164
Identity = 286/446 (64.13%), Postives = 339/446 (76.01%), Query Frame = 0


Query: 196 MLEDRSFLASRVFSSSCQHETQWPCF--NLTYCLEAGMGNGKRPSDHDADELHRNVRPR- 255
           M+EDR++L SR+FSSS   E++WP          E+ + NGKR  ++D DEL ++  PR 
Sbjct: 1   MVEDRTYLMSRIFSSSRLSESKWPYMYPQPEDSSESNLINGKRALENDVDELRQSKSPRL 60

Query: 256 --------------------SSWDSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLAS 315
                               S  ++  +SD  SLI+ IGRDNSI+CLIRCSRS YGS+AS
Sbjct: 61  MGFSIHGNEAIEEDEQEQDQSDSNNNGNSDGDSLINDIGRDNSISCLIRCSRSGYGSIAS 120

Query: 316 LNRSFRSLIRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFM 375
           LNRSFRSL+++GE+Y+LRR N ++EHWVYFSC LLEW AF+P +RRWM+LP M     FM
Sbjct: 121 LNRSFRSLVKTGEIYRLRRQNQIVEHWVYFSCQLLEWVAFNPFERRWMNLPTMPSGVTFM 180

Query: 376 CSDKESLGVGTDLLVFGK-DLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAIL 435
           C+DKESL VGTDLLV GK D +SHV YRYS+LTNSW  G+ MN PRCLFGSAS GEIAI 
Sbjct: 181 CADKESLAVGTDLLVLGKDDYSSHVIYRYSLLTNSWSSGMRMNSPRCLFGSASLGEIAIF 240

Query: 436 AGGCDSNGNILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARVL 495
           AGG DS G I  SAE+YNSE +TW TLP M KPRK+CSGVFMD KFYVIGG+GG++++VL
Sbjct: 241 AGGFDSFGKISDSAEMYNSELQTWTTLPKMNKPRKMCSGVFMDGKFYVIGGIGGNDSKVL 300

Query: 496 TCGEEYDLDTGKWTEIPNMSPGRSGAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVR 555
           TCGEE+DL+T KWTEIP MSP RS      +MPAAAEAPPL+AVVN+ELYAADHA+MEVR
Sbjct: 301 TCGEEFDLETKKWTEIPEMSPPRS-----REMPAAAEAPPLVAVVNNELYAADHADMEVR 360

Query: 556 KYDKVRRTWFTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPS-- 615
           KYDK  + WFT+GRLPERA S NGWGLAFRACG+RLIVIGGPR+ G GYIELNSW+PS  
Sbjct: 361 KYDKESKKWFTLGRLPERADSVNGWGLAFRACGERLIVIGGPRSSGGGYIELNSWIPSSD 420

[Close]

BLAST of CmoCh18G011860 vs. TAIR 10
Match: AT2G02870.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 558.9 bits (1439), Expect = 5.0e-159
Identity = 263/362 (72.65%), Postives = 306/362 (84.53%), Query Frame = 0


Query: 256 DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 315
           + GDSSDS SLI+ IGRDNSI+CLIRCSRSDYGS+ASLNR+FRSL++SGE+Y+LRR N  
Sbjct: 107 NGGDSSDSHSLINEIGRDNSIDCLIRCSRSDYGSIASLNRNFRSLVKSGEIYRLRRQNGF 166

Query: 316 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGK-DLNS 375
           +EHWVYFSC LLEW AFDP++RRWM LP M  +  FMC+DKESL VGTDLLV GK D +S
Sbjct: 167 VEHWVYFSCQLLEWVAFDPVERRWMQLPTMPSSVTFMCADKESLAVGTDLLVLGKDDFSS 226

Query: 376 HVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKT 435
           HV YRYS+LTNSW  G+ MN PRCLFGSAS GEIAI AGGCDS G IL  AE+YNSE +T
Sbjct: 227 HVIYRYSLLTNSWSSGMKMNSPRCLFGSASLGEIAIFAGGCDSQGKILDFAEMYNSELQT 286

Query: 436 WVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARVLTCGEEYDLDTGKWTEIPNMSPGR 495
           W+TLP M KPRK+CSGVFMD KFYVIGG+GG++++ LTCGEEYDL+T KWT+IP++SP R
Sbjct: 287 WITLPRMNKPRKMCSGVFMDGKFYVIGGIGGADSKGLTCGEEYDLETKKWTQIPDLSPPR 346

Query: 496 SGAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTN 555
           S A  + DM  AAEAPPL+AVVN++LYAADHA+MEVRKYDK  + W TVGRLPERA S N
Sbjct: 347 SRAD-QADMSPAAEAPPLVAVVNNQLYAADHADMEVRKYDKENKKWLTVGRLPERAGSVN 406

Query: 556 GWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSE-GPPRWDLLARKSSASFVYNCAVM 615
           GWGLAFRACG+RLIVIGGP+  G G+IELNSW+PS+ GPP+W LL RK S +FVYNCAVM
Sbjct: 407 GWGLAFRACGERLIVIGGPKCSGGGFIELNSWIPSDGGPPQWTLLDRKHSPTFVYNCAVM 466

[Close]

BLAST of CmoCh18G011860 vs. TAIR 10
Match: AT2G02870.2 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 558.9 bits (1439), Expect = 5.0e-159
Identity = 263/362 (72.65%), Postives = 306/362 (84.53%), Query Frame = 0


Query: 256 DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 315
           + GDSSDS SLI+ IGRDNSI+CLIRCSRSDYGS+ASLNR+FRSL++SGE+Y+LRR N  
Sbjct: 107 NGGDSSDSHSLINEIGRDNSIDCLIRCSRSDYGSIASLNRNFRSLVKSGEIYRLRRQNGF 166

Query: 316 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGK-DLNS 375
           +EHWVYFSC LLEW AFDP++RRWM LP M  +  FMC+DKESL VGTDLLV GK D +S
Sbjct: 167 VEHWVYFSCQLLEWVAFDPVERRWMQLPTMPSSVTFMCADKESLAVGTDLLVLGKDDFSS 226

Query: 376 HVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKT 435
           HV YRYS+LTNSW  G+ MN PRCLFGSAS GEIAI AGGCDS G IL  AE+YNSE +T
Sbjct: 227 HVIYRYSLLTNSWSSGMKMNSPRCLFGSASLGEIAIFAGGCDSQGKILDFAEMYNSELQT 286

Query: 436 WVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARVLTCGEEYDLDTGKWTEIPNMSPGR 495
           W+TLP M KPRK+CSGVFMD KFYVIGG+GG++++ LTCGEEYDL+T KWT+IP++SP R
Sbjct: 287 WITLPRMNKPRKMCSGVFMDGKFYVIGGIGGADSKGLTCGEEYDLETKKWTQIPDLSPPR 346

Query: 496 SGAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTN 555
           S A  + DM  AAEAPPL+AVVN++LYAADHA+MEVRKYDK  + W TVGRLPERA S N
Sbjct: 347 SRAD-QADMSPAAEAPPLVAVVNNQLYAADHADMEVRKYDKENKKWLTVGRLPERAGSVN 406

Query: 556 GWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSE-GPPRWDLLARKSSASFVYNCAVM 615
           GWGLAFRACG+RLIVIGGP+  G G+IELNSW+PS+ GPP+W LL RK S +FVYNCAVM
Sbjct: 407 GWGLAFRACGERLIVIGGPKCSGGGFIELNSWIPSDGGPPQWTLLDRKHSPTFVYNCAVM 466

[Close]

BLAST of CmoCh18G011860 vs. TAIR 10
Match: AT2G02870.3 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 558.9 bits (1439), Expect = 5.0e-159
Identity = 263/362 (72.65%), Postives = 306/362 (84.53%), Query Frame = 0


Query: 256 DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 315
           + GDSSDS SLI+ IGRDNSI+CLIRCSRSDYGS+ASLNR+FRSL++SGE+Y+LRR N  
Sbjct: 107 NGGDSSDSHSLINEIGRDNSIDCLIRCSRSDYGSIASLNRNFRSLVKSGEIYRLRRQNGF 166

Query: 316 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGK-DLNS 375
           +EHWVYFSC LLEW AFDP++RRWM LP M  +  FMC+DKESL VGTDLLV GK D +S
Sbjct: 167 VEHWVYFSCQLLEWVAFDPVERRWMQLPTMPSSVTFMCADKESLAVGTDLLVLGKDDFSS 226

Query: 376 HVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKT 435
           HV YRYS+LTNSW  G+ MN PRCLFGSAS GEIAI AGGCDS G IL  AE+YNSE +T
Sbjct: 227 HVIYRYSLLTNSWSSGMKMNSPRCLFGSASLGEIAIFAGGCDSQGKILDFAEMYNSELQT 286

Query: 436 WVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARVLTCGEEYDLDTGKWTEIPNMSPGR 495
           W+TLP M KPRK+CSGVFMD KFYVIGG+GG++++ LTCGEEYDL+T KWT+IP++SP R
Sbjct: 287 WITLPRMNKPRKMCSGVFMDGKFYVIGGIGGADSKGLTCGEEYDLETKKWTQIPDLSPPR 346

Query: 496 SGAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTN 555
           S A  + DM  AAEAPPL+AVVN++LYAADHA+MEVRKYDK  + W TVGRLPERA S N
Sbjct: 347 SRAD-QADMSPAAEAPPLVAVVNNQLYAADHADMEVRKYDKENKKWLTVGRLPERAGSVN 406

Query: 556 GWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSE-GPPRWDLLARKSSASFVYNCAVM 615
           GWGLAFRACG+RLIVIGGP+  G G+IELNSW+PS+ GPP+W LL RK S +FVYNCAVM
Sbjct: 407 GWGLAFRACGERLIVIGGPKCSGGGFIELNSWIPSDGGPPQWTLLDRKHSPTFVYNCAVM 466

[Close]

BLAST of CmoCh18G011860 vs. TAIR 10
Match: AT1G26930.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 530.0 bits (1364), Expect = 2.5e-150
Identity = 267/425 (62.82%), Postives = 316/425 (74.35%), Query Frame = 0


Query: 201 SFLASRVFSSSCQHETQWPCFNLTYCLEAGMGNGKRP-SDHDADELHRNVRPRSSWDS-- 260
           S L S +F+     ET+W          + + +GKR   ++D  +LH     + + DS  
Sbjct: 9   SCLVSTLFTMPSHKETKW----------SFLVSGKRSFLNNDESDLHFKKMYKLTTDSSE 68

Query: 261 ----GDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLN 320
               G SSDSG+LI  + RD+S++CLIRCSR+DY S+AS+NRS RSLIRSGE+Y+LRRL 
Sbjct: 69  GEDNGSSSDSGTLIPGMNRDDSLSCLIRCSRADYCSIASVNRSLRSLIRSGEIYRLRRLQ 128

Query: 321 DVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLN 380
             +EHWVYFSCHL EWEAFDP  +RWMHLP M  NECF  +DKESL VGTDLLVFG +++
Sbjct: 129 GTLEHWVYFSCHLNEWEAFDPRSKRWMHLPSMPQNECFRYADKESLAVGTDLLVFGWEVS 188

Query: 381 SHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETK 440
           S+V YRYS+LTNSW    SMN PRCLFGSAS GEIA+LAGGCDS+G IL +AELYN E +
Sbjct: 189 SYVIYRYSLLTNSWSTAKSMNMPRCLFGSASYGEIAVLAGGCDSSGRILDTAELYNYEDQ 248

Query: 441 TWVTLPNMTKPRKLCSGVFMDKKFYVIGGVG---GSEARVLTCGEEYDLDTGKWTEIPNM 500
           TW+ LP M K RK+CSGVFMD KFYVIGG+G    +E +VLTCGEE+DL T KWTEIP M
Sbjct: 249 TWLVLPGMNKRRKMCSGVFMDGKFYVIGGIGVGEENEPKVLTCGEEFDLKTRKWTEIPEM 308

Query: 501 SPGRSGAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERA 560
           SP RS  G    M AAA APPL+AVVND+LYAADHA M VR+YDK +R W  VG LPE+A
Sbjct: 309 SPPRSNQG--NGMSAAAMAPPLVAVVNDQLYAADHAGMAVRRYDKEKRVWNKVGNLPEQA 368

Query: 561 VSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNC 616
            S NGWGLAFRACGDR+IVIGGP+A GEG+IELNSWVPS   P W LL +K S +FVYNC
Sbjct: 369 GSMNGWGLAFRACGDRIIVIGGPKAPGEGFIELNSWVPSVTTPEWHLLGKKQSVNFVYNC 421

The following BLAST results are available for this feature:

BLAST of CmoCh18G011860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L736	7.1e-158	72.65	F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana OX=3702 GN=SKIP11 PE=1...	[more]
Q84M94	3.5e-149	62.82	F-box/kelch-repeat protein At1g26930 OS=Arabidopsis thaliana OX=3702 GN=At1g2693...	[more]
Q9CA63	4.5e-136	54.08	F-box/kelch-repeat protein At1g74510 OS=Arabidopsis thaliana OX=3702 GN=At1g7451...	[more]
Q9FKJ0	2.2e-87	47.08	F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana OX=3702 GN=At5g6057...	[more]
Q9LI89	3.0e-55	34.43	F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana OX=3702 GN=At3g2715...	[more]

BLAST of CmoCh18G011860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1B1	7.9e-253	100.00	F-box/kelch-repeat protein SKIP11-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1HTC3	1.7e-247	98.33	F-box/kelch-repeat protein SKIP11-like OS=Cucurbita maxima OX=3661 GN=LOC1114676...	[more]
A0A5D3D261	5.3e-225	88.05	F-box/kelch-repeat protein SKIP11-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KVW7	1.6e-224	87.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604950 PE=4 SV=1	[more]
A0A6J1DE00	3.8e-223	87.67	F-box/kelch-repeat protein SKIP11 OS=Momordica charantia OX=3673 GN=LOC111019206...	[more]

BLAST of CmoCh18G011860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14330.1	1.4e-164	64.13	Galactose oxidase/kelch repeat superfamily protein	[more]
AT2G02870.1	5.0e-159	72.65	Galactose oxidase/kelch repeat superfamily protein	[more]
AT2G02870.2	5.0e-159	72.65	Galactose oxidase/kelch repeat superfamily protein	[more]
AT2G02870.3	5.0e-159	72.65	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G26930.1	2.5e-150	62.82	Galactose oxidase/kelch repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006652	Kelch repeat type 1	SMART	SM00612	kelc_smart	coord: 364..407 e-value: 12.0 score: 2.3 coord: 408..455 e-value: 2.8E-7 score: 40.2 coord: 456..500 e-value: 0.085 score: 21.1
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 396..441 e-value: 3.1E-9 score: 36.3 coord: 444..491 e-value: 9.0E-10 score: 38.0
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 313..594 e-value: 2.0E-39 score: 137.3
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 326..612
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 484..503
None	No IPR available	PANTHER	PTHR46122:SF2	F-BOX/KELCH-REPEAT PROTEIN SKIP11	coord: 256..615
None	No IPR available	PANTHER	PTHR46122	GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED	coord: 256..615

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G011860.1	CmoCh18G011860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding