Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAATCAAATTTCCAAGAAGCGGGATCGGGACGACTCGGCTGAGTTTACTGAGTCGGAGAACGGTTCGTCCGAGGTGAAGCGACTCAGAGATGACCTTTTAGGTTTTTTCGACGAGTCCGATCCTGAACCAGCGACTCAAGATCTCGATTCGTTGATGAGGAGTTTTGAGGAAGAAATCGCCACTGCGTCGTCGTCTCCGGTGCCGGTGGTGGATTTGACGGTGGATTCCGGTGAGTCTCAGCCGGAGTTAGGTTATCTATTGGAAGCCTCCGACGATGAACTCGGTCTTCCGCCTTCTGTTACTTCGATTAGTAAGGAGGAGTTCGACGAATCGGCCGTGTTTGCGAGAGTTTCGAGTGATTCGTTGGAAGTCGGAGAGATGTGGAGGTTTGAGGATCAGATTCCTAACTATGACGCTTTCGAACTGGAAGGCGGAGATGTGTATAGCGGAAGCGATACGGCGGAGTATGTGGCGTTTGATGGACTGTTTGAGTATTCGAATCTGTGTTTGGATGCGTCGGAGAACTCGGATTTTCTTTGGCGGCAAGAATCTCTGCCGGCGCAGTAG
mRNA sequence
ATGGAGAATCAAATTTCCAAGAAGCGGGATCGGGACGACTCGGCTGAGTTTACTGAGTCGGAGAACGGTTCGTCCGAGGTGAAGCGACTCAGAGATGACCTTTTAGGTTTTTTCGACGAGTCCGATCCTGAACCAGCGACTCAAGATCTCGATTCGTTGATGAGGAGTTTTGAGGAAGAAATCGCCACTGCGTCGTCGTCTCCGGTGCCGGTGGTGGATTTGACGGTGGATTCCGGTGAGTCTCAGCCGGAGTTAGGTTATCTATTGGAAGCCTCCGACGATGAACTCGGTCTTCCGCCTTCTGTTACTTCGATTAGTAAGGAGGAGTTCGACGAATCGGCCGTGTTTGCGAGAGTTTCGAGTGATTCGTTGGAAGTCGGAGAGATGTGGAGGTTTGAGGATCAGATTCCTAACTATGACGCTTTCGAACTGGAAGGCGGAGATGTGTATAGCGGAAGCGATACGGCGGAGTATGTGGCGTTTGATGGACTGTTTGAGTATTCGAATCTGTGTTTGGATGCGTCGGAGAACTCGGATTTTCTTTGGCGGCAAGAATCTCTGCCGGCGCAGTAG
Coding sequence (CDS)
ATGGAGAATCAAATTTCCAAGAAGCGGGATCGGGACGACTCGGCTGAGTTTACTGAGTCGGAGAACGGTTCGTCCGAGGTGAAGCGACTCAGAGATGACCTTTTAGGTTTTTTCGACGAGTCCGATCCTGAACCAGCGACTCAAGATCTCGATTCGTTGATGAGGAGTTTTGAGGAAGAAATCGCCACTGCGTCGTCGTCTCCGGTGCCGGTGGTGGATTTGACGGTGGATTCCGGTGAGTCTCAGCCGGAGTTAGGTTATCTATTGGAAGCCTCCGACGATGAACTCGGTCTTCCGCCTTCTGTTACTTCGATTAGTAAGGAGGAGTTCGACGAATCGGCCGTGTTTGCGAGAGTTTCGAGTGATTCGTTGGAAGTCGGAGAGATGTGGAGGTTTGAGGATCAGATTCCTAACTATGACGCTTTCGAACTGGAAGGCGGAGATGTGTATAGCGGAAGCGATACGGCGGAGTATGTGGCGTTTGATGGACTGTTTGAGTATTCGAATCTGTGTTTGGATGCGTCGGAGAACTCGGATTTTCTTTGGCGGCAAGAATCTCTGCCGGCGCAGTAG
Protein sequence
MENQISKKRDRDDSAEFTESENGSSEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFARVSSDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCLDASENSDFLWRQESLPAQ
Homology
BLAST of CmoCh18G010370 vs. ExPASy TrEMBL
Match:
A0A6J1G1T4 (uncharacterized protein LOC111449910 OS=Cucurbita moschata OX=3662 GN=LOC111449910 PE=4 SV=1)
HSP 1 Score: 368.6 bits (945), Expect = 1.5e-98
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
Query: 1 MENQISKKRDRDDSAEFTESENGSSEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60
MENQISKKRDRDDSAEFTESENGSSEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE
Sbjct: 1 MENQISKKRDRDDSAEFTESENGSSEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60
Query: 61 IATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFARVS 120
IATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFARVS
Sbjct: 61 IATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFARVS 120
Query: 121 SDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCLDASENSDF 180
SDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCLDASENSDF
Sbjct: 121 SDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCLDASENSDF 180
Query: 181 LWRQESLPAQ 191
LWRQESLPAQ
Sbjct: 181 LWRQESLPAQ 190
BLAST of CmoCh18G010370 vs. ExPASy TrEMBL
Match:
A0A6J1HYB6 (uncharacterized protein LOC111467364 OS=Cucurbita maxima OX=3661 GN=LOC111467364 PE=4 SV=1)
HSP 1 Score: 360.9 bits (925), Expect = 3.2e-96
Identity = 185/190 (97.37%), Postives = 188/190 (98.95%), Query Frame = 0
Query: 1 MENQISKKRDRDDSAEFTESENGSSEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60
MENQISKKRDRDDSAEFTESENGS EVKRLRDDLLGFFDESDPEPATQ+LDSLMRSFEEE
Sbjct: 1 MENQISKKRDRDDSAEFTESENGSPEVKRLRDDLLGFFDESDPEPATQELDSLMRSFEEE 60
Query: 61 IATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFARVS 120
IATASSSP PVVDLTV+SGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFARVS
Sbjct: 61 IATASSSPAPVVDLTVESGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFARVS 120
Query: 121 SDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCLDASENSDF 180
+DSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCLDASENSDF
Sbjct: 121 TDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCLDASENSDF 180
Query: 181 LWRQESLPAQ 191
LWRQESLPAQ
Sbjct: 181 LWRQESLPAQ 190
BLAST of CmoCh18G010370 vs. ExPASy TrEMBL
Match:
A0A5A7SV83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00920 PE=4 SV=1)
HSP 1 Score: 304.7 bits (779), Expect = 2.7e-79
Identity = 163/190 (85.79%), Postives = 170/190 (89.47%), Query Frame = 0
Query: 1 MENQISKKRDRDDSAEFTESENGSSEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60
MENQ SKKRDRDDSA ESE GS EVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE
Sbjct: 1 MENQNSKKRDRDDSA---ESETGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60
Query: 61 IATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFARVS 120
IATASSSPVPVVDLT DSGESQPELGYLLEASDDELGLPP S S+EE FAR+S
Sbjct: 61 IATASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPP---SNSQEE------FARIS 120
Query: 121 SDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCLDASENSDF 180
+DS ++GEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGL EYSNLC D+S+NSDF
Sbjct: 121 TDSSDIGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLLEYSNLCFDSSDNSDF 178
Query: 181 LWRQESLPAQ 191
LWRQESLPAQ
Sbjct: 181 LWRQESLPAQ 178
BLAST of CmoCh18G010370 vs. ExPASy TrEMBL
Match:
A0A1S3BEX2 (uncharacterized protein LOC103489276 OS=Cucumis melo OX=3656 GN=LOC103489276 PE=4 SV=1)
HSP 1 Score: 304.7 bits (779), Expect = 2.7e-79
Identity = 163/190 (85.79%), Postives = 170/190 (89.47%), Query Frame = 0
Query: 1 MENQISKKRDRDDSAEFTESENGSSEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60
MENQ SKKRDRDDSA ESE GS EVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE
Sbjct: 1 MENQNSKKRDRDDSA---ESETGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60
Query: 61 IATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFARVS 120
IATASSSPVPVVDLT DSGESQPELGYLLEASDDELGLPP S S+EE FAR+S
Sbjct: 61 IATASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPP---SNSQEE------FARIS 120
Query: 121 SDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCLDASENSDF 180
+DS ++GEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGL EYSNLC D+S+NSDF
Sbjct: 121 TDSSDIGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLLEYSNLCFDSSDNSDF 178
Query: 181 LWRQESLPAQ 191
LWRQESLPAQ
Sbjct: 181 LWRQESLPAQ 178
BLAST of CmoCh18G010370 vs. ExPASy TrEMBL
Match:
A0A0A0KR57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608610 PE=4 SV=1)
HSP 1 Score: 295.4 bits (755), Expect = 1.7e-76
Identity = 156/190 (82.11%), Postives = 164/190 (86.32%), Query Frame = 0
Query: 1 MENQISKKRDRDDSAEFTESENGSSEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60
MENQ SKKRDRDDSA ESE GS EVKRLRDDLLGFFD+SDPEP TQDLDSLMRSFEEE
Sbjct: 1 MENQNSKKRDRDDSA---ESETGSPEVKRLRDDLLGFFDDSDPEPPTQDLDSLMRSFEEE 60
Query: 61 IATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFARVS 120
IATASSSPVPVVDLT DS +SQPELGYLLEASDDELGLPPS + FAR+S
Sbjct: 61 IATASSSPVPVVDLTADSADSQPELGYLLEASDDELGLPPS---------NSQQDFARIS 120
Query: 121 SDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCLDASENSDF 180
+DS ++GEMWRF DQIPNYDAFELEGGDVYSGSDTAEYVAFDGL EYSNLC DAS+NSDF
Sbjct: 121 TDSSDIGEMWRFVDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLLEYSNLCFDASDNSDF 178
Query: 181 LWRQESLPAQ 191
LWRQESLPAQ
Sbjct: 181 LWRQESLPAQ 178
BLAST of CmoCh18G010370 vs. TAIR 10
Match:
AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 151.4 bits (381), Expect = 7.5e-37
Identity = 92/190 (48.42%), Postives = 121/190 (63.68%), Query Frame = 0
Query: 7 KKRDRDDSAEFTESENGSSEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATASS 66
KKR RD+S F E+ S EVKRLRDDL D+SDPEP +QDLDS+M+SFE+E++T ++
Sbjct: 16 KKRVRDES--FDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELSTVTT 75
Query: 67 SPVPVVDLTVDSGESQPELGYLLEASDDELGLPP----SVTSISKEEFDESAV--FARVS 126
+ + +GE+QP+LGYLLEASDDELGLPP S ++KEE V R S
Sbjct: 76 T---TAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRAS 135
Query: 127 SDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCLDASENSDF 186
SDS + E+W FED + NY + G D +YVA +GLFE+S+ C D+ + F
Sbjct: 136 SDSSGIDEIWGFEDHVSNYGGLDFGSG----VGDGGDYVAVEGLFEFSDDCFDSGDL--F 194
Query: 187 LWRQESLPAQ 191
WR ESLPA+
Sbjct: 196 SWRSESLPAE 194
BLAST of CmoCh18G010370 vs. TAIR 10
Match:
AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )
HSP 1 Score: 129.4 bits (324), Expect = 3.0e-30
Identity = 80/168 (47.62%), Postives = 105/168 (62.50%), Query Frame = 0
Query: 7 KKRDRDDSAEFTESENGSSEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATASS 66
KKR RD+S F E+ S EVKRLRDDL D+SDPEP +QDLDS+M+SFE+E++T ++
Sbjct: 16 KKRVRDES--FDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELSTVTT 75
Query: 67 SPVPVVDLTVDSGESQPELGYLLEASDDELGLPP----SVTSISKEEFDESAV--FARVS 126
+ + +GE+QP+LGYLLEASDDELGLPP S ++KEE V R S
Sbjct: 76 T---TAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRAS 135
Query: 127 SDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYS 169
SDS + E+W FED + NY + G D +YVA +G F Y+
Sbjct: 136 SDSSGIDEIWGFEDHVSNYGGLDFGSG----VGDGGDYVAVEGFFYYT 174
BLAST of CmoCh18G010370 vs. TAIR 10
Match:
AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )
HSP 1 Score: 129.4 bits (324), Expect = 3.0e-30
Identity = 80/171 (46.78%), Postives = 106/171 (61.99%), Query Frame = 0
Query: 7 KKRDRDDSAEFTESENGSSEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATASS 66
KKR RD+S F E+ S EVKRLRDDL D+SDPEP +QDLDS+M+SFE+E++T ++
Sbjct: 16 KKRVRDES--FDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELSTVTT 75
Query: 67 SPVPVVDLTVDSGESQPELGYLLEASDDELGLPP----SVTSISKEEFDESAV--FARVS 126
+ + +GE+QP+LGYLLEASDDELGLPP S ++KEE V R S
Sbjct: 76 T---TAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRAS 135
Query: 127 SDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLC 172
SDS + E+W FED + NY + G D +YVA +GL + + C
Sbjct: 136 SDSSGIDEIWGFEDHVSNYGGLDFGSG----VGDGGDYVAVEGLSFFHSFC 177
BLAST of CmoCh18G010370 vs. TAIR 10
Match:
AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 115.9 bits (289), Expect = 3.5e-26
Identity = 83/198 (41.92%), Postives = 115/198 (58.08%), Query Frame = 0
Query: 1 MENQISKKRDRDDSAEFTESENG----SSEVKRLRDDLLGFFDESDPEPATQDLDSLMRS 60
ME+ + ++ R DS +G S +VKRLRDDL FD+S +P +QDLDS+M+S
Sbjct: 1 MEDLLEERLTRTDSVGNKRVRDGLDLDSPDVKRLRDDL---FDDSGLDPVSQDLDSVMKS 60
Query: 61 FEEEIATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVT---SISKEEFDES 120
FE E++T +++ + SGE+QP+LGYL EASDDELGLPP +T ++ +E+
Sbjct: 61 FENELSTTTAA--------LSSGETQPDLGYLFEASDDELGLPPPLTPPQTLLPPSCEET 120
Query: 121 AV-FARVSSDSLEVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFEYSNLCL 180
R SSDS EVGE+ FED + + +L GD DGLFEY + CL
Sbjct: 121 VTELVRASSDSSEVGELCGFEDHVTEFGPCDL--GD-------------DGLFEYFDGCL 170
Query: 181 DASENSDFLWRQESLPAQ 191
D+ + F WR E LPA+
Sbjct: 181 DSGDL--FSWRPEFLPAE 170
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1G1T4 | 1.5e-98 | 100.00 | uncharacterized protein LOC111449910 OS=Cucurbita moschata OX=3662 GN=LOC1114499... | [more] |
A0A6J1HYB6 | 3.2e-96 | 97.37 | uncharacterized protein LOC111467364 OS=Cucurbita maxima OX=3661 GN=LOC111467364... | [more] |
A0A5A7SV83 | 2.7e-79 | 85.79 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3BEX2 | 2.7e-79 | 85.79 | uncharacterized protein LOC103489276 OS=Cucumis melo OX=3656 GN=LOC103489276 PE=... | [more] |
A0A0A0KR57 | 1.7e-76 | 82.11 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608610 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G13360.1 | 7.5e-37 | 48.42 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G13360.2 | 3.0e-30 | 47.62 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT1G13360.3 | 3.0e-30 | 46.78 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT3G25870.1 | 3.5e-26 | 41.92 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |