CmoCh18G009540 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh18G009540
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr18: 10639044 .. 10646796 (+)
RNA-Seq ExpressionCmoCh18G009540
SyntenyCmoCh18G009540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGAGCATGAAAACAAACCAGAGGCCAAAGAGGGATAAAGATAATGGATGTTCGTTCACTCTCAAACGCCACCTCCACCACTTCCTCCGCCGTCTTCCCGCCACCTCGCCGTCGTCACCACCATTCTCATCCTTCTTCCGCCCTAATTGTTATCTCATTGAAGCGTCCGCCTCCGCCGCCGCCGCCGTCTCGTTCCGATTCTGACGATTCCTCCGGCTCAACCGCCTCAATCTCTGGCCGAATTCGTCGCCCACAAATCCTAAAAACCTCTTCCTCCCCTAAACGCACCACCTCTAAAGTTCCGTCTAATCCTCTCAAGAATCTGGTCGGCTCTGCCAATGTTCCTGTTCTTCCTTTGCCTCCGCCGCCGCCGCCTCCGCTCCCTGTTTCCCACTCGCTCGGCGACAAACTCTGGCTTTCCAGTAAGCTCTCTCCACCGCCTCCCCCGATCACCGAGATACCGGAGGAAGATGAAAGCGAAAACGAAGAAATTGAAACCGAGGATTCTTCGAGTGAGGGGCGGAGAGAAGTTCAATTCCGCCAAGAGGGTAAGATTTTTGTTGGGAACTTGCCTAATTGGATAAAGAAGCATGAGGTTCAACAGTTTTTTCGGCAGTTTGGTCCTGTCAACAATGTGATATTGATTAAGGGTCACGATACTACGAAAAGAAATGCCGGATACGGATTCGTCATATATGATGGGTCGACTGCAGCTAAGTCGGCCATGAAAGCCGTTGAGTTTGATGGAGTGGAGTTTCACGGAAGGGTTTTGTCTGTGAAATTGGATGATGGGAGGAGGTTAAAGGAGAAGGCGTATGAGAGGGCGAAATGGATGGAGGGAGATGACAGTGTGGAGTTTCGTTCACAATGGCATGAAGAGAGGGATAAGGCACGGAAGGGCTTTCGCATGGTTATTGAGACAGAGCCGGAGGATTGGCAGGCGGTTGTCTCAGCCTTCGAGAGGATTAAAAAGGTAGCTTCTTCAATTCCTTTGGAATGTTTTTGAATTAGCGGCTTCTTGAATAAATTATGTGTTTACAATATGGTTCTTGATGGATTGTTTTTCAAGTTATGTAAATTCTTATTCAGAATCTCAACTCAAGTTCGGTCGAATAATTTCTCCGCAGTTCTAGCCGATATTGCTAACTTCGAGCAAGCGACCATGAGCTATTGTATTACAAGTTCATGTTTCCTTAAGTGTCTTGCATTTTTCATGGTTATTTTATGTTTGGTTAGATAACTGCTTGGCAGTAGTGTAATATCGCAGATGGTGTGTTCTCTAATTACAAGTACATATGTCATTTATACTCGACGTTTTTGTTCTTTCATTTATCCAAGTCAAAGTTTGGTTTTCAAAAAAAGAAGGTATAATAGTTGGGGAGTGTAACAGCCCAACCCCACCGCTAGAAGATGTTATCCTCTTTTCCCTTTCGAGCTTTCCCTCAAGGTTTTTAAAACGTGTCTGCTAAGGAGAAGTTTTCACACTCTTATAAAGAATGTTTTGTTCTCCTCTCCAACCGATATGGGATCTCACAGTGAGGTTCGCAGAATTAGATGTAGACTTCATGGTACATACTTTAATCTGTTAGTTCATAATAGATGTATGTATGCTTTTGGAATAGATTTTGCTTATAACTGACAATTCTGGGTTTTCCATGAATTTTGCTGTTTGTTTTGAGAGTTGTATTCAAGCTTAGTATGTTTTTTTAATACAACAAAGCATCGCCATGCCTACTTGAATCCGTTCATTCAAACTTGCACTCACGATGACAAATTCATGTGCAATAGTGTATGCAAGCTCTGAAACATGTCATATTCACCGTATACGTATTCTTTAGAGGACTGAATTTGGACATTTCATATTAATTGTTTTGATATTTTTTGTTGTTATGGGGTGAATTGTACTATCTTCAAGCCTTCTAGGAAGGAGTATAGTTTGATGGTGAACTACTATGCAAGAAGAGGTGATATGCATCGTGCACGTGAAACATTTGAAAAGATGCGGGCTAGAGGAATAGAACCCACGACTCATGTCTACACAAAGTAATAACTATTCCTAAACATTTCTCTTTCCTTTTATTATGTTTCAAATATATTGATTCAAGCTTAATTTATTTTGAGTGCTTCATGATGCGCAGCCTTATACATGCTTATGCAGTAGGTAGAGATATGGAAGAAGCATTATCTTGTGTCAGAAAAATGAAAGAGGAAGGCATAGAAATGAGTTTGGTAACTTACAGCATTCTTGTGGGTGGATTTGCCAAAATGGGAAATGCAGAGTAAGTAATTATCATTTCATGTGTGAGTACATAGGTTCATAGAGTTTTCATTATATATAAGCTTTGCCCTGTTATTTTCAAATCCCTAGATTGATTTTCTTGCCATTCGTTTCCATTGTTGATTGGTAAAACCTACAAATACCAAATGGTCAATCACTTTAGTGATACCTAGCTCTCATCTGAAAAAAGGTTGTGCATGTCTTCTCAGACCTTATGAACATTTGATCAGGCTTCTTGACTATTGTGTATTTAAGTTTATCAATTAAGGGCTTGTAGTCAAAACATTTGATCAGGCTTCTTGACTAATGTGTATTTAAGTTTATCAATTAAGGGCTTGTAGTCAAGTGGTGGCTGCCTTCATTATGAGGGTTCCATGGTAGTACTTTGTGAGATCCCACATCGGTTGGAGAGGGGAACAAACCATTCTTTACAAAGGTGTGGAAACTTCTCCCTAGTAGACACGTTTTAAAACCTTAAGGGGAAGCCCAGAAGAGAAAGCCCAAAGAGGACAATATTTGTTAGCGGTGGGCTTGGGCTTTGGCTTTTACAAATGATATCAAAGCCAGACACCGGCAACGAGGACGCCGGGTTCCCAAGGGGGTGGATTATGAGATCCCACATCGGTTATAGAGGGGAACAAAACATTCTTTACAAGTGTGTGGAAACCTCTCCTTAGCAGACGCATTTTAAAACCTTGATGGGAAGCCCAGAAGGGAAAGCCCAAAGAAGACAATATCGGTTAGTAGTGAGCTTGAGCTTGGACTTGGGCCTAGCCTGTTGCATGTTCCGTTCTGAAGGAAGTTGAATCCTATTGCTGCAGGGGGAACTTTGCGGAAAATCATTTTAAGGTTGCTTTTCGCCCAATGTTTGACTGTAGGAAGTAGATGCTATTTTTCTGTATTATCTAGTCGTTTAGAGTTTGTTCACTCAATTTATTTCTGTTTTCATATTCACTAGTCATTTTTCTTATGCATCTTTTTTTTATCTAAATTGTATTACATTTGCATTTGTCTTGGAAGAGCTGCAGATCACTGGTTTCAGGAGGCGAAAGAGAAACACTCGTTGAATGCCATCATTTATGGGAATATTATATATGCTTACTGGTAATTATTTGACAAACGATGGATCAAATTTCTTTTTTCTATGAAATTGTTACATCGCCTGTAATATTCTTCGTCGCTGAGTGTGTGCATGTGTTCTTTTTTTTTTTTTTTTGTGGATTATTTTCTAGTATAATACAAGGGAAATACTATTTTATAATTAGCTAGTTTTGATTACAGTCAAATATGCAATATGGATAGAGCGGAAGCTTTGGTGAGGCAAATGGAAGAAGAAGGCATAGATGCTCCAATTGACATATATCACACCATGATGGATGGTTATACAATGGTTGGAGATGAGAAGAAATGTCTGCTTGTGTTCGAGAGATTTAAGGTACAATTCTATGGCAATAGGTTGGAGTAGACGTGTGCATGAGTTGATCTGTTTCCTCAAATCTTATGTCCTCGGTTCAGTTTATGGCGCCGAGCTCGGGTAATTTCTATTTTTGGAACAAGTGTCAACTAAAAGAAAAGAATAGTTGGAGAGGTTCTGATTATTTTTTATCTGAAATCACAGAAAAACCTACAATATTAGGATTAGTATCTCTGTTTTTTTATGGTGCACCTTTAGTCGAACCACCCAACAGATGACCTCGATTGTAACGGCCCAGGCCCACCCCTAGCAAATATTGTCTTCTTTGGGCTTTCCATCAAGGTTTTTAAAACGCGTCTCCTAGGGAGAGGTTTTCACACCCTTATAAAGGGTGTTTCGTATTGTTAGATCCCACATCGGTTGAGGAGAAGAACAAAACACCCTTTATAAGGGTGTGAAAACCTCTCCCTAGGAGATGCGTTTTAAAAACCTTGAGGGAAAGCCCATAAGGGAAATCCCAAAGAGAAGACAATATCTGCTAGCGGTGGGCCTGGACCGTTACATCGATTGCATTGATAAAAAGAATTTTGACCTCAATGCTGAAAAAATGATTCACTTCAACCTCGTGTTCATGATTGTTTTCCATCAATTTTAATTTCTTTTCCTTTAAACATCTTATATTTTATTAACTATGATGCAGGAATGTGGTTTGAATCCTTCAGTCATTACATATGGGTGTCTTATTAATCTTTACACAAAGGTAAAAACTTGTTTTTTTACTCCCAATATTACTTATGTGTTATTGTTTTCCTGATTCCTTAGAAGAAAATGAACTTTAACGTTAGAGTATCTATTTGTTAGGTTAAAATATTTGGTACTTCATTAGGACACTGAATGAATGAGTTTGGTTGGTCTCACTTTCTCACTCTTTGAAGATCGTGATTTTGAAGCTAACGACGCCTGTTGTTACAAACGTCAATTTTACACGATTTCTTGCATGCATATGATTGTAGATTCTCTTTGATTATTTTTTGCCCTTCCTTCATCGTTCTTTCAGCTCGGGAAAGTTTCTAAAGCTCTGGAAGTTAGCAAAGAAATGGAGCATGCTGGCATAAAACACAACATGAAGACCTACTCCATGTTGATCAATGGGTTCTTGAAGTTGAAAGATTGGGCTAATGCTTTCGCTATTTTTGAGGATTTGATCAAAGACGGTATTAAGCCTGATGTAGTACTCTATAATAATATTATCACAGCATTCTGTGGGATGGGGAAGATGGATCGTGCTGTTTGTACTGTCAAGGAAATGCAAAAACAAAGGCATAGGCCCACAACTCGAACATTTATGCCCATCATACATGGTTTTGCAAGGCAAGGGGACATGAGGAAAGCGCTAGATGTATTCGATATGATGCGGATGTCTGGATGCATTCCAACAGTGCACACTTACAATGCTCTGATTCTTGGTCTAGTTGAGAAGCGTAAGGTAATTCTTTCGAACTATGAAACGTGTCATGCCTATGGATGTTCCTTTCCTCTAGTAGTAGTTTTGAGCCATTAGATCCCAACTTTCCTCATTGAATCCTCAAATTCTCTAAGACCTTTGTGGAATGCTGACTCGATCCAACTTCTCGTGTGTATGAAACTAATCTTACATAGACGTTTGCATTATAATTTACGAGATCCTAGCTTTCCTCATATAGCTGTACTATTTTAAAGAGCTCCCTGTTTACATTTTATTCTATCCTTCCAGATGGAGAAGGCTGTAGAAATACTTGACGAGATGACGTTGGCTGGCGTAAATCCAAATGAACACACATACACGACCATCATGCATGGTTATGCTTCTTTGGGGGATACCGGAAAAGCGTTCGTTTACTTCACTAAACTGAGGGATGAGGGTCTGAAGCTTGATGTTTATACATATGAAGCATTGCTTAAAGCATGCTGCAAATCAGGCAGGATGCAGAGCGCATTGGCAGTCACCAAGGAAATGAGTGCTCAAAATATCCCGAGAAACACCTTTATTTATAACATTTTAATTGATGGGTATGTTCTAGATGTGAGTAGGGTTGCACTTGTTACAGGATGAATTATAACTTGTAATTCTCTTTGCTTCTGCCTCGCTGCTACTAATTAGCTTTTTCCATATAGATGGGCTCGACGTGGCGATGTTTGGGAGGCGGCTGATCTAATACAACAAATGAAAAAAGAAGGGGTTCAACCTGACATTCATACCTACACATCCTTCATAAATGCTTGCTCCAAGGCTGGAGATATGCAGGTATTGACAAAATCAAATAAGCCAAATCTTTTTAGTTTTTACATCATGGTGTCGTGACAACGTGGTGCGATGGTAACCTAGAGGTGATTTTAATTGCTTAAATGTGAGATCCCACGTCAATTGGAGAGAGGAACGAGTACCAGTGAGGACGCTGGGCCTCGAAAGGGAGTGGATTGTGAGATCCTACATCGGTTGGAGAGGGGAACGAAACATTCTTTATAAAAGTATGGAAACTTCTCCCTAGCAGACACGTGTTAAAATCGTCCAAAGAGGACAATATGTGCTAGCGGTGGGCTTGGACACTTACATTAAAAGTGATCTCATCTGAATTGATTATCGAATTTTGTCGTATCAGATATATTATATCTTAGTGTTGCCTGAATTAGTTTCTGATAGGATCAGTAAGAAAATAAATTTATGTTCGTTTGGTCTTCAAATTATGAAAGTTCTTGGGAAACGTGCAGTGGTCTACGGCTAGATTTTAGGTTTCGTTTGAGTGTTGGTTTCTAAGTATTTTGGTAACTATCCTTCGACTCATATTTGTTAGCTAGGTTCATCAAACATTGATTACCTATACTATTCTTGGCATGTTCTAATTTCTAACTGGTAAGCTATTTTCCAGAGAGCAACAAAAACAATTGTAGAAATGAAATCAGCCGGAGTGAAGCCTAACATTAAGACGTATACTACGCTAATTCACGGTTGGGCCCGTGCTTCTTTACCCGAGAAGGCATTGTCGTGCTTTGCAGAGATGAAGCTATCTGGGTTGAAGCCAGACAAAGCTGTTTACCATTGTCTAATGACGTCATTACTCTCGAGGGCTACCGTTGCAGAAGGAAGCATATATCCCGGCATTCTCTCCGTCTGCAAAGAGATGGTCGATTCGGGATTAACCGTGGATATGGGGACAGCAGTTCACTGGTCCAAGTGCTTGCGCAAAATCGAGAGAACAGGTGGGGAGATAACTGAAGCCTTGCAGAAGACCTTCCCTCCCAATTGGAACTCATATAACAATGTCCACATGAGCTCCAGCCTAGACTCGGACGATGAATATGGTATAAGTGACGACGAGAACGAAGACGATGATATATGTCAAGAGGAAGTATCCGACGCTCGGGACGACGATGTAGTCGGTAGATCATGGTTTTGAGTACACAAAAGCATAGAAACAAGCCTTTTAAGCATGCAAACAGAATCTCACTGCTAAAATGGTCAGTAGTTTGGCCCTACCTTGGCTTGATTTACATTGTTTTATGTATAGGCTTTGGATTTACTGCTCTGCTGTTTATATGAATCTCGAACGTCTGAATCGAGGGAATGCATCTTAACCATTTGACCTCTATCCAGAATGAACGGATGAGATCGGTTTGGAAGTCGAAGTCGAAGTCGATGTGACACTGCCAAATTTAGAATATAACAGTAGATGATAAGGAAGGATTCTTGTGGTTCCACCAAACAGCACAGCATAGCCAAGATTCTTCCATGTTCTTCCCACCACTGCCTCATCTTTATCAAAGAATGTGATGGATTTGAATTTTTCCCCTAATTTTGCAACTTGTTTTGAATGATTGTGTGAAGAAAATGGACAAAAGGAATATAATGGTTTAAGTATCATTATCTGTGTTGGATTAGTTGAATGAATGAATGAAGCTCCATGGCTATGGAGGGTCAATGAAGAACACTTACAGCCATGGAAATATTTTATTGTTATTATGATTCGATGAATTATGTGGATGAGTATTATTATAATCAAGGGAGACAAACCAGCTCATTTAGG

mRNA sequence

GGGAGCATGAAAACAAACCAGAGGCCAAAGAGGGATAAAGATAATGGATGTTCGTTCACTCTCAAACGCCACCTCCACCACTTCCTCCGCCGTCTTCCCGCCACCTCGCCGTCGTCACCACCATTCTCATCCTTCTTCCGCCCTAATTGTTATCTCATTGAAGCGTCCGCCTCCGCCGCCGCCGCCGTCTCGTTCCGATTCTGACGATTCCTCCGGCTCAACCGCCTCAATCTCTGGCCGAATTCGTCGCCCACAAATCCTAAAAACCTCTTCCTCCCCTAAACGCACCACCTCTAAAGTTCCGTCTAATCCTCTCAAGAATCTGGTCGGCTCTGCCAATGTTCCTGTTCTTCCTTTGCCTCCGCCGCCGCCGCCTCCGCTCCCTGTTTCCCACTCGCTCGGCGACAAACTCTGGCTTTCCAGTAAGCTCTCTCCACCGCCTCCCCCGATCACCGAGATACCGGAGGAAGATGAAAGCGAAAACGAAGAAATTGAAACCGAGGATTCTTCGAGTGAGGGGCGGAGAGAAGTTCAATTCCGCCAAGAGGGTAAGATTTTTGTTGGGAACTTGCCTAATTGGATAAAGAAGCATGAGGTTCAACAGTTTTTTCGGCAGTTTGGTCCTGTCAACAATGTGATATTGATTAAGGGTCACGATACTACGAAAAGAAATGCCGGATACGGATTCGTCATATATGATGGGTCGACTGCAGCTAAGTCGGCCATGAAAGCCGTTGAGTTTGATGGAGTGGAGTTTCACGGAAGGGTTTTGTCTGTGAAATTGGATGATGGGAGGAGGTTAAAGGAGAAGGCGTATGAGAGGGCGAAATGGATGGAGGGAGATGACAGTGTGGAGTTTCGTTCACAATGGCATGAAGAGAGGGATAAGGCACGGAAGGGCTTTCGCATGGTTATTGAGACAGAGCCGGAGGATTGGCAGGCGGTTGTCTCAGCCTTCGAGAGGATTAAAAAGCCTTCTAGGAAGGAGTATAGTTTGATGGTGAACTACTATGCAAGAAGAGGTGATATGCATCGTGCACGTGAAACATTTGAAAAGATGCGGGCTAGAGGAATAGAACCCACGACTCATGTCTACACAAACCTTATACATGCTTATGCAGTAGGTAGAGATATGGAAGAAGCATTATCTTGTGTCAGAAAAATGAAAGAGGAAGGCATAGAAATGAGTTTGGTAACTTACAGCATTCTTGTGGGTGGATTTGCCAAAATGGGAAATGCAGAAGCTGCAGATCACTGGTTTCAGGAGGCGAAAGAGAAACACTCGTTGAATGCCATCATTTATGGGAATATTATATATGCTTACTGTCAAATATGCAATATGGATAGAGCGGAAGCTTTGGTGAGGCAAATGGAAGAAGAAGGCATAGATGCTCCAATTGACATATATCACACCATGATGGATGGTTATACAATGGTTGGAGATGAGAAGAAATGTCTGCTTGTGTTCGAGAGATTTAAGGAATGTGGTTTGAATCCTTCAGTCATTACATATGGGTGTCTTATTAATCTTTACACAAAGCTCGGGAAAGTTTCTAAAGCTCTGGAAGTTAGCAAAGAAATGGAGCATGCTGGCATAAAACACAACATGAAGACCTACTCCATGTTGATCAATGGGTTCTTGAAGTTGAAAGATTGGGCTAATGCTTTCGCTATTTTTGAGGATTTGATCAAAGACGGTATTAAGCCTGATGTAGTACTCTATAATAATATTATCACAGCATTCTGTGGGATGGGGAAGATGGATCGTGCTGTTTGTACTGTCAAGGAAATGCAAAAACAAAGGCATAGGCCCACAACTCGAACATTTATGCCCATCATACATGGTTTTGCAAGGCAAGGGGACATGAGGAAAGCGCTAGATGTATTCGATATGATGCGGATGTCTGGATGCATTCCAACAGTGCACACTTACAATGCTCTGATTCTTGGTCTAGTTGAGAAGCGTAAGATGGAGAAGGCTGTAGAAATACTTGACGAGATGACGTTGGCTGGCGTAAATCCAAATGAACACACATACACGACCATCATGCATGGTTATGCTTCTTTGGGGGATACCGGAAAAGCGTTCGTTTACTTCACTAAACTGAGGGATGAGGGTCTGAAGCTTGATGTTTATACATATGAAGCATTGCTTAAAGCATGCTGCAAATCAGGCAGGATGCAGAGCGCATTGGCAGTCACCAAGGAAATGAGTGCTCAAAATATCCCGAGAAACACCTTTATTTATAACATTTTAATTGATGGATGGGCTCGACGTGGCGATGTTTGGGAGGCGGCTGATCTAATACAACAAATGAAAAAAGAAGGGGTTCAACCTGACATTCATACCTACACATCCTTCATAAATGCTTGCTCCAAGGCTGGAGATATGCAGAGAGCAACAAAAACAATTGTAGAAATGAAATCAGCCGGAGTGAAGCCTAACATTAAGACGTATACTACGCTAATTCACGGTTGGGCCCGTGCTTCTTTACCCGAGAAGGCATTGTCGTGCTTTGCAGAGATGAAGCTATCTGGGTTGAAGCCAGACAAAGCTGTTTACCATTGTCTAATGACGTCATTACTCTCGAGGGCTACCGTTGCAGAAGGAAGCATATATCCCGGCATTCTCTCCGTCTGCAAAGAGATGGTCGATTCGGGATTAACCGTGGATATGGGGACAGCAGTTCACTGGTCCAAGTGCTTGCGCAAAATCGAGAGAACAGGTGGGGAGATAACTGAAGCCTTGCAGAAGACCTTCCCTCCCAATTGGAACTCATATAACAATGTCCACATGAGCTCCAGCCTAGACTCGGACGATGAATATGGTATAAGTGACGACGAGAACGAAGACGATGATATATGTCAAGAGGAAGTATCCGACGCTCGGGACGACGATGTAGTCGGTAGATCATGGTTTTGAGTACACAAAAGCATAGAAACAAGCCTTTTAAGCATGCAAACAGAATCTCACTGCTAAAATGAATGAACGGATGAGATCGGTTTGGAAGTCGAAGTCGAAGTCGATGTGACACTGCCAAATTTAGAATATAACAGTAGATGATAAGGAAGGATTCTTGTGGTTCCACCAAACAGCACAGCATAGCCAAGATTCTTCCATGTTCTTCCCACCACTGCCTCATCTTTATCAAAGAATGTGATGGATTTGAATTTTTCCCCTAATTTTGCAACTTGTTTTGAATGATTGTGTGAAGAAAATGGACAAAAGGAATATAATGGTTTAAGTATCATTATCTGTGTTGGATTAGTTGAATGAATGAATGAAGCTCCATGGCTATGGAGGGTCAATGAAGAACACTTACAGCCATGGAAATATTTTATTGTTATTATGATTCGATGAATTATGTGGATGAGTATTATTATAATCAAGGGAGACAAACCAGCTCATTTAGG

Coding sequence (CDS)

ATGGATGTTCGTTCACTCTCAAACGCCACCTCCACCACTTCCTCCGCCGTCTTCCCGCCACCTCGCCGTCGTCACCACCATTCTCATCCTTCTTCCGCCCTAATTGTTATCTCATTGAAGCGTCCGCCTCCGCCGCCGCCGCCGTCTCGTTCCGATTCTGACGATTCCTCCGGCTCAACCGCCTCAATCTCTGGCCGAATTCGTCGCCCACAAATCCTAAAAACCTCTTCCTCCCCTAAACGCACCACCTCTAAAGTTCCGTCTAATCCTCTCAAGAATCTGGTCGGCTCTGCCAATGTTCCTGTTCTTCCTTTGCCTCCGCCGCCGCCGCCTCCGCTCCCTGTTTCCCACTCGCTCGGCGACAAACTCTGGCTTTCCAGTAAGCTCTCTCCACCGCCTCCCCCGATCACCGAGATACCGGAGGAAGATGAAAGCGAAAACGAAGAAATTGAAACCGAGGATTCTTCGAGTGAGGGGCGGAGAGAAGTTCAATTCCGCCAAGAGGGTAAGATTTTTGTTGGGAACTTGCCTAATTGGATAAAGAAGCATGAGGTTCAACAGTTTTTTCGGCAGTTTGGTCCTGTCAACAATGTGATATTGATTAAGGGTCACGATACTACGAAAAGAAATGCCGGATACGGATTCGTCATATATGATGGGTCGACTGCAGCTAAGTCGGCCATGAAAGCCGTTGAGTTTGATGGAGTGGAGTTTCACGGAAGGGTTTTGTCTGTGAAATTGGATGATGGGAGGAGGTTAAAGGAGAAGGCGTATGAGAGGGCGAAATGGATGGAGGGAGATGACAGTGTGGAGTTTCGTTCACAATGGCATGAAGAGAGGGATAAGGCACGGAAGGGCTTTCGCATGGTTATTGAGACAGAGCCGGAGGATTGGCAGGCGGTTGTCTCAGCCTTCGAGAGGATTAAAAAGCCTTCTAGGAAGGAGTATAGTTTGATGGTGAACTACTATGCAAGAAGAGGTGATATGCATCGTGCACGTGAAACATTTGAAAAGATGCGGGCTAGAGGAATAGAACCCACGACTCATGTCTACACAAACCTTATACATGCTTATGCAGTAGGTAGAGATATGGAAGAAGCATTATCTTGTGTCAGAAAAATGAAAGAGGAAGGCATAGAAATGAGTTTGGTAACTTACAGCATTCTTGTGGGTGGATTTGCCAAAATGGGAAATGCAGAAGCTGCAGATCACTGGTTTCAGGAGGCGAAAGAGAAACACTCGTTGAATGCCATCATTTATGGGAATATTATATATGCTTACTGTCAAATATGCAATATGGATAGAGCGGAAGCTTTGGTGAGGCAAATGGAAGAAGAAGGCATAGATGCTCCAATTGACATATATCACACCATGATGGATGGTTATACAATGGTTGGAGATGAGAAGAAATGTCTGCTTGTGTTCGAGAGATTTAAGGAATGTGGTTTGAATCCTTCAGTCATTACATATGGGTGTCTTATTAATCTTTACACAAAGCTCGGGAAAGTTTCTAAAGCTCTGGAAGTTAGCAAAGAAATGGAGCATGCTGGCATAAAACACAACATGAAGACCTACTCCATGTTGATCAATGGGTTCTTGAAGTTGAAAGATTGGGCTAATGCTTTCGCTATTTTTGAGGATTTGATCAAAGACGGTATTAAGCCTGATGTAGTACTCTATAATAATATTATCACAGCATTCTGTGGGATGGGGAAGATGGATCGTGCTGTTTGTACTGTCAAGGAAATGCAAAAACAAAGGCATAGGCCCACAACTCGAACATTTATGCCCATCATACATGGTTTTGCAAGGCAAGGGGACATGAGGAAAGCGCTAGATGTATTCGATATGATGCGGATGTCTGGATGCATTCCAACAGTGCACACTTACAATGCTCTGATTCTTGGTCTAGTTGAGAAGCGTAAGATGGAGAAGGCTGTAGAAATACTTGACGAGATGACGTTGGCTGGCGTAAATCCAAATGAACACACATACACGACCATCATGCATGGTTATGCTTCTTTGGGGGATACCGGAAAAGCGTTCGTTTACTTCACTAAACTGAGGGATGAGGGTCTGAAGCTTGATGTTTATACATATGAAGCATTGCTTAAAGCATGCTGCAAATCAGGCAGGATGCAGAGCGCATTGGCAGTCACCAAGGAAATGAGTGCTCAAAATATCCCGAGAAACACCTTTATTTATAACATTTTAATTGATGGATGGGCTCGACGTGGCGATGTTTGGGAGGCGGCTGATCTAATACAACAAATGAAAAAAGAAGGGGTTCAACCTGACATTCATACCTACACATCCTTCATAAATGCTTGCTCCAAGGCTGGAGATATGCAGAGAGCAACAAAAACAATTGTAGAAATGAAATCAGCCGGAGTGAAGCCTAACATTAAGACGTATACTACGCTAATTCACGGTTGGGCCCGTGCTTCTTTACCCGAGAAGGCATTGTCGTGCTTTGCAGAGATGAAGCTATCTGGGTTGAAGCCAGACAAAGCTGTTTACCATTGTCTAATGACGTCATTACTCTCGAGGGCTACCGTTGCAGAAGGAAGCATATATCCCGGCATTCTCTCCGTCTGCAAAGAGATGGTCGATTCGGGATTAACCGTGGATATGGGGACAGCAGTTCACTGGTCCAAGTGCTTGCGCAAAATCGAGAGAACAGGTGGGGAGATAACTGAAGCCTTGCAGAAGACCTTCCCTCCCAATTGGAACTCATATAACAATGTCCACATGAGCTCCAGCCTAGACTCGGACGATGAATATGGTATAAGTGACGACGAGAACGAAGACGATGATATATGTCAAGAGGAAGTATCCGACGCTCGGGACGACGATGTAGTCGGTAGATCATGGTTTTGA

Protein sequence

MDVRSLSNATSTTSSAVFPPPRRRHHHSHPSSALIVISLKRPPPPPPPSRSDSDDSSGSTASISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANVPVLPLPPPPPPPLPVSHSLGDKLWLSSKLSPPPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWIKKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGRVLSVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKGFRMVIETEPEDWQAVVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHSLNAIIYGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERFKECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVNPNEHTYTTIMHGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQRATKTIVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVYHCLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEALQKTFPPNWNSYNNVHMSSSLDSDDEYGISDDENEDDDICQEEVSDARDDDVVGRSWF
Homology
BLAST of CmoCh18G009540 vs. ExPASy Swiss-Prot
Match: Q0WMY5 (Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPR4 PE=1 SV=1)

HSP 1 Score: 1247.6 bits (3227), Expect = 0.0e+00
Identity = 631/939 (67.20%), Postives = 757/939 (80.62%), Query Frame = 0

Query: 29  HPSSALIVISLKRPPP-PPPPSRSDSDDSSGSTASISGRIRRPQILKTSSSPKRTTSKVP 88
           H   A I  SLK+PPP PP P  S  D            +RRP+    SSS   + S +P
Sbjct: 25  HSPVASISFSLKQPPPQPPEPPESPPD------------LRRPEKSIGSSSSSSSPSPIP 84

Query: 89  S-------NPLKNLVGSANVPVLPLPPPPPPPLPVSHSLGDKLWLSSKLSPPPPPITEIP 148
           S       NPLK L   ++V  L              SL  KL LSSKLSPPPPP    P
Sbjct: 85  SPKTPLKINPLKGLTNRSSVSPLVQSEVSSKVSSFGSSLASKLRLSSKLSPPPPPPPPPP 144

Query: 149 EEDESENEE---IETEDSSSEGRR-EVQFRQEGKIFVGNLPNWIKKHEVQQFFRQFGPVN 208
            E+ ++  +    +T+    E R  + +FRQEGKIFVGNLP WIKK E ++FFRQFGP+ 
Sbjct: 145 VEETTQFRDEFRSDTKPPEEETRNPQQEFRQEGKIFVGNLPTWIKKPEFEEFFRQFGPIE 204

Query: 209 NVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGRVLSVKLDDGRRLKEK 268
           NVILIKGH   ++NAG+GF+IY    A KSAMKAVEFDGVEFHGR+L+VKLDDG+RLK K
Sbjct: 205 NVILIKGHHEVEKNAGFGFIIY---AAEKSAMKAVEFDGVEFHGRILTVKLDDGKRLKTK 264

Query: 269 AYERAKWM---EGDDSVEFRSQWHEERDKARKGFRMVIETEPEDWQAVVSAFERIKKPSR 328
           A +R +W+   E D  +  +S WH+ER+ +RK  + +++T  ++WQAV+SAFE+I KPSR
Sbjct: 265 AEQRVRWVEEGEEDTKMSNKSSWHQEREGSRKSLQRILDTNGDNWQAVISAFEKISKPSR 324

Query: 329 KEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDMEEALSCVRK 388
            E+ LMV +Y RRGDMHRARETFE+MRARGI PT+ +YT+LIHAYAVGRDM+EALSCVRK
Sbjct: 325 TEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRK 384

Query: 389 MKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKH-SLNAIIYGNIIYAYCQICN 448
           MKEEGIEMSLVTYS++VGGF+K G+AEAAD+WF EAK  H +LNA IYG IIYA+CQ CN
Sbjct: 385 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCN 444

Query: 449 MDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERFKECGLNPSVITYGC 508
           M+RAEALVR+MEEEGIDAPI IYHTMMDGYTMV DEKK L+VF+R KECG  P+V+TYGC
Sbjct: 445 MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGC 504

Query: 509 LINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG 568
           LINLYTK+GK+SKALEVS+ M+  G+KHN+KTYSM+INGF+KLKDWANAFA+FED++K+G
Sbjct: 505 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 564

Query: 569 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFARQGDMRKAL 628
           +KPDV+LYNNII+AFCGMG MDRA+ TVKEMQK RHRPTTRTFMPIIHG+A+ GDMR++L
Sbjct: 565 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 624

Query: 629 DVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVNPNEHTYTTIMHGY 688
           +VFDMMR  GC+PTVHT+N LI GLVEKR+MEKAVEILDEMTLAGV+ NEHTYT IM GY
Sbjct: 625 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 684

Query: 689 ASLGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNT 748
           AS+GDTGKAF YFT+L++EGL +D++TYEALLKACCKSGRMQSALAVTKEMSA+NIPRN+
Sbjct: 685 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 744

Query: 749 FIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQRATKTIVE 808
           F+YNILIDGWARRGDVWEAADLIQQMKKEGV+PDIHTYTSFI+ACSKAGDM RAT+TI E
Sbjct: 745 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 804

Query: 809 MKSAGVKPNIKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVYHCLMTSLLSRAT 868
           M++ GVKPNIKTYTTLI GWARASLPEKALSC+ EMK  G+KPDKAVYHCL+TSLLSRA+
Sbjct: 805 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 864

Query: 869 VAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEALQKTFPPNWNS 928
           +AE  IY G++++CKEMV++GL VDMGTAVHWSKCL KIE +GGE+TE LQKTFPP+W+S
Sbjct: 865 IAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTETLQKTFPPDWSS 924

Query: 929 YNNVH----MSSSLDSDDEYGISDDENEDDDICQEEVSD 948
           +++ H      S +DSD++    +D  +D+D+    VSD
Sbjct: 925 HHHHHGFLDQVSDVDSDEDDVDGEDGEDDEDV--NSVSD 946

BLAST of CmoCh18G009540 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 3.5e-63
Identity = 145/536 (27.05%), Postives = 264/536 (49.25%), Query Frame = 0

Query: 346 PTTHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGN-AEAADH 405
           PT   ++ L  A A  +  +  L+  ++M+ +GI  +L T SI++  F +      A   
Sbjct: 86  PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145

Query: 406 WFQEAKEKHSLNAIIYGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTM 465
             +  K  +  N I +  +I   C    +  A  LV +M E G    +   +T+++G  +
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205

Query: 466 VGDEKKCLLVFERFKECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKT 525
            G E + +L+ ++  E G  P+ +TYG ++N+  K G+ + A+E+ ++ME   IK +   
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 526 YSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQ 585
           YS++I+G  K     NAF +F ++   GI  +++ YN +I  FC  G+ D     +++M 
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325

Query: 586 KQRHRPTTRTFMPIIHGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKME 645
           K++  P   TF  +I  F ++G +R+A ++   M   G  P   TY +LI G  ++  ++
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385

Query: 646 KAVEILDEMTLAGVNPNEHTYTTIMHGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALL 705
           KA +++D M   G +PN  T+  +++GY            F K+   G+  D  TY  L+
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445

Query: 706 KACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQ 765
           +  C+ G++  A  + +EM ++ +P N   Y IL+DG    G+  +A ++ ++++K  ++
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505

Query: 766 PDIHTYTSFINACSKAGDMQRATKTIVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSC 825
            DI  Y   I+    A  +  A      +   GVKP +KTY  +I G  +     +A   
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565

Query: 826 FAEMKLSGLKPDKAVYHCLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGT 881
           F +M+  G  PD   Y     ++L RA + +G     +  + +E+   G +VD  T
Sbjct: 566 FRKMEEDGHAPDGWTY-----NILIRAHLGDGDATKSV-KLIEELKRCGFSVDAST 615

BLAST of CmoCh18G009540 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 7.8e-63
Identity = 139/499 (27.86%), Postives = 248/499 (49.70%), Query Frame = 0

Query: 316 YSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDMEEALSCVRKMK 375
           YS+ +N + RR  +  A     KM   G EP     ++L++ Y   + + +A++ V +M 
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180

Query: 376 EEGIEMSLVTYSILVGG-FAKMGNAEAADHWFQEAKEKHSLNAIIYGNIIYAYCQICNMD 435
           E G +    T++ L+ G F     +EA     Q  +     + + YG ++   C+  ++D
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240

Query: 436 RAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERFKECGLNPSVITYGCLI 495
            A +L+++ME+  I+A + IY+T++DG          L +F      G+ P V TY  LI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300

Query: 496 NLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 555
           +     G+ S A  +  +M    I  N+ T+S LI+ F+K      A  +++++IK  I 
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 556 PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFARQGDMRKALDV 615
           PD+  Y+++I  FC   ++D A    + M  +   P   T+  +I GF +   + + +++
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420

Query: 616 FDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVNPNEHTYTTIMHGYAS 675
           F  M   G +    TY  LI G  + R  + A  +  +M   GV+PN  TY  ++ G   
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480

Query: 676 LGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFI 735
            G   KA V F  L+   ++ D+YTY  +++  CK+G+++    +   +S + +  N   
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540

Query: 736 YNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQRATKTIVEMK 795
           YN +I G+ R+G   EA  L+++MK++G  P+  TY + I A  + GD + + + I EM+
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600

Query: 796 SAGVKPNIKT---YTTLIH 811
           S G   +  T    T ++H
Sbjct: 601 SCGFAGDASTIGLVTNMLH 619

BLAST of CmoCh18G009540 vs. ExPASy Swiss-Prot
Match: Q9FMQ1 (Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g12100 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 3.0e-62
Identity = 153/537 (28.49%), Postives = 253/537 (47.11%), Query Frame = 0

Query: 311 PSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDMEEALSC 370
           PS    +L++++  +          F  +      P+  +Y   I A     D+ + L  
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201

Query: 371 VRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHSLNAII-YGNIIYAYCQ 430
             +MK + I  S+  Y++L+ G  K      A+  F E   +  L ++I Y  +I  YC+
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261

Query: 431 ICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERFKECGLNPSVIT 490
             N +++  +  +M+ + I+  +  ++T++ G    G  +    V +  K+ G  P   T
Sbjct: 262 AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321

Query: 491 YGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLI 550
           +  L + Y+   K   AL V +    +G+K N  T S+L+N   K      A  I    +
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381

Query: 551 KDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFARQGDMR 610
             G+ P+ V+YN +I  +C  G +  A   ++ M+KQ  +P    +  +I  F   G+M 
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441

Query: 611 KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVNPNEHTYTTIM 670
            A    + M++ G  P+V TYN LI G   K + +K  +IL EM   G  PN  +Y T++
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501

Query: 671 HGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIP 730
           +         +A +    + D G+   V  Y  L+  CC  G+++ A   +KEM  + I 
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561

Query: 731 RNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQRATKT 790
            N   YN LIDG +  G + EA DL+ ++ ++G++PD+ TY S I+    AG++QR    
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621

Query: 791 IVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVY----HC 843
             EMK +G+KP +KTY  LI    +  + E     F EM    LKPD  VY    HC
Sbjct: 622 YEEMKRSGIKPTLKTYHLLISLCTKEGI-ELTERLFGEM---SLKPDLLVYNGVLHC 674

BLAST of CmoCh18G009540 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 2.5e-61
Identity = 142/539 (26.35%), Postives = 262/539 (48.61%), Query Frame = 0

Query: 346 PTTHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHW 405
           PT   +  L  A A  +  E  L+  ++M+ +GI  S+ T SI++  F +      A   
Sbjct: 86  PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145

Query: 406 FQE-AKEKHSLNAIIYGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTM 465
             +  K  +  + +I+  ++   C  C +  A  LV +M E G    +   +T+++G  +
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205

Query: 466 VGDEKKCLLVFERFKECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKT 525
            G     +++ +R  E G  P+ +TYG ++N+  K G+ + A+E+ ++ME   IK +   
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 526 YSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQ 585
           YS++I+G  K     NAF +F ++   G K D++ YN +I  FC  G+ D     +++M 
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325

Query: 586 KQRHRPTTRTFMPIIHGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKME 645
           K++  P   TF  +I  F ++G +R+A  +   M   G  P   TYN+LI G  ++ ++E
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385

Query: 646 KAVEILDEMTLAGVNPNEHTYTTIMHGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALL 705
           +A++++D M   G +P+  T+  +++GY            F ++   G+  +  TY  L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445

Query: 706 KACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQ 765
           +  C+SG+++ A  + +EM ++ +  +   Y IL+DG    G++ +A ++  +++K  ++
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505

Query: 766 PDIHTYTSFINACSKAGDMQRATKTIVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSC 825
            DI  Y   I+    A  +  A      +   GVK + + Y  +I    R     KA   
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565

Query: 826 FAEMKLSGLKPDKAVYHCLMTSLL---SRATVAEGSIYPGILSVCKEMVDSGLTVDMGT 881
           F +M   G  PD+  Y+ L+ + L      T AE         + +EM  SG   D+ T
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAE---------LIEEMKSSGFPADVST 615

BLAST of CmoCh18G009540 vs. ExPASy TrEMBL
Match: A0A6J1FZV7 (pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449427 PE=3 SV=1)

HSP 1 Score: 1921.4 bits (4976), Expect = 0.0e+00
Identity = 959/959 (100.00%), Postives = 959/959 (100.00%), Query Frame = 0

Query: 1   MDVRSLSNATSTTSSAVFPPPRRRHHHSHPSSALIVISLKRPPPPPPPSRSDSDDSSGST 60
           MDVRSLSNATSTTSSAVFPPPRRRHHHSHPSSALIVISLKRPPPPPPPSRSDSDDSSGST
Sbjct: 1   MDVRSLSNATSTTSSAVFPPPRRRHHHSHPSSALIVISLKRPPPPPPPSRSDSDDSSGST 60

Query: 61  ASISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANVPVLPLPPPPPPPLPVSHSLG 120
           ASISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANVPVLPLPPPPPPPLPVSHSLG
Sbjct: 61  ASISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANVPVLPLPPPPPPPLPVSHSLG 120

Query: 121 DKLWLSSKLSPPPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI 180
           DKLWLSSKLSPPPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI
Sbjct: 121 DKLWLSSKLSPPPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI 180

Query: 181 KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHG 240
           KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHG
Sbjct: 181 KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHG 240

Query: 241 RVLSVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKGFRMVIETEPEDWQA 300
           RVLSVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKGFRMVIETEPEDWQA
Sbjct: 241 RVLSVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKGFRMVIETEPEDWQA 300

Query: 301 VVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAV 360
           VVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAV
Sbjct: 301 VVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAV 360

Query: 361 GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHSLNAIIY 420
           GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHSLNAIIY
Sbjct: 361 GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHSLNAIIY 420

Query: 421 GNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERFKE 480
           GNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERFKE
Sbjct: 421 GNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERFKE 480

Query: 481 CGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWAN 540
           CGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWAN
Sbjct: 481 CGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWAN 540

Query: 541 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIH 600
           AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIH
Sbjct: 541 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIH 600

Query: 601 GFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVNP 660
           GFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVNP
Sbjct: 601 GFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVNP 660

Query: 661 NEHTYTTIMHGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVT 720
           NEHTYTTIMHGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVT
Sbjct: 661 NEHTYTTIMHGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVT 720

Query: 721 KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKA 780
           KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKA
Sbjct: 721 KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKA 780

Query: 781 GDMQRATKTIVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVY 840
           GDMQRATKTIVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVY
Sbjct: 781 GDMQRATKTIVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVY 840

Query: 841 HCLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITE 900
           HCLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITE
Sbjct: 841 HCLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITE 900

Query: 901 ALQKTFPPNWNSYNNVHMSSSLDSDDEYGISDDENEDDDICQEEVSDARDDDVVGRSWF 960
           ALQKTFPPNWNSYNNVHMSSSLDSDDEYGISDDENEDDDICQEEVSDARDDDVVGRSWF
Sbjct: 901 ALQKTFPPNWNSYNNVHMSSSLDSDDEYGISDDENEDDDICQEEVSDARDDDVVGRSWF 959

BLAST of CmoCh18G009540 vs. ExPASy TrEMBL
Match: A0A6J1HUK8 (pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467602 PE=3 SV=1)

HSP 1 Score: 1847.8 bits (4785), Expect = 0.0e+00
Identity = 931/965 (96.48%), Postives = 941/965 (97.51%), Query Frame = 0

Query: 1   MDVRSLSNATSTTSSAVFPPPRRRHHHSHPSSALIVISLKRPPPPPPPSRSDSDDSSGST 60
           MDVRSLSNATSTTSSAVF PPRRRHHHSHPSS LIV SLKRPPPPPPP RSDSDDSSGST
Sbjct: 1   MDVRSLSNATSTTSSAVFAPPRRRHHHSHPSSTLIVFSLKRPPPPPPP-RSDSDDSSGST 60

Query: 61  ASISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANVPVLPLPPPPPPPLPVSHSLG 120
           ASIS RIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANVPV PLPPPPPPP PVSHS+ 
Sbjct: 61  ASISSRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANVPVFPLPPPPPPP-PVSHSVA 120

Query: 121 DKLWLSSKLSPPPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI 180
           DKLWLSSKLSP PPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI
Sbjct: 121 DKLWLSSKLSPLPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI 180

Query: 181 KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHG 240
           KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHG
Sbjct: 181 KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHG 240

Query: 241 RVLSVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKGFRMVIETEPEDWQA 300
           RVL+VKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKG RMVIETEP DWQA
Sbjct: 241 RVLTVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKGLRMVIETEPGDWQA 300

Query: 301 VVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAV 360
           VVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPT+HVYTNLIHAYAV
Sbjct: 301 VVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTSHVYTNLIHAYAV 360

Query: 361 GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHSLNAIIY 420
           GRDMEEALSCVRKMKEEGIEMSLVTYSI+VGGFAKMGNAEAADHWFQEAKEKHSLNAIIY
Sbjct: 361 GRDMEEALSCVRKMKEEGIEMSLVTYSIVVGGFAKMGNAEAADHWFQEAKEKHSLNAIIY 420

Query: 421 GNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERFKE 480
           GNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDE+KCLLVFERFKE
Sbjct: 421 GNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKE 480

Query: 481 CGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWAN 540
           CGLNPSV+TYGCLINLYTKLGKVSKALEV KEME+AGIKHNMKTYSMLINGFLKLKDWAN
Sbjct: 481 CGLNPSVVTYGCLINLYTKLGKVSKALEVCKEMENAGIKHNMKTYSMLINGFLKLKDWAN 540

Query: 541 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIH 600
           AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIH
Sbjct: 541 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIH 600

Query: 601 GFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVNP 660
           GFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGV+P
Sbjct: 601 GFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVSP 660

Query: 661 NEHTYTTIMHGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVT 720
           NEHTYTTIMHGYASLGDTGKAF YFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVT
Sbjct: 661 NEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVT 720

Query: 721 KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKA 780
           KEMSAQNIPRN FIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKA
Sbjct: 721 KEMSAQNIPRNAFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKA 780

Query: 781 GDMQRATKTIVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVY 840
           GDMQRATKTIVEMKSAGVKPN+KTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVY
Sbjct: 781 GDMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVY 840

Query: 841 HCLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITE 900
           HCLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITE
Sbjct: 841 HCLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITE 900

Query: 901 ALQKTFPPNWNSYNNVHMSSSLDSDDEYGISDDENE------DDDICQEEVSDARDDDVV 960
           ALQKTFPPNWNSYNNVHMSSSLDSDDE GISDDE+E      DDD CQE VSDAR DDVV
Sbjct: 901 ALQKTFPPNWNSYNNVHMSSSLDSDDESGISDDEDEDEDEDKDDDTCQEGVSDAR-DDVV 960

BLAST of CmoCh18G009540 vs. ExPASy TrEMBL
Match: A0A5D3CFW5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001920 PE=3 SV=1)

HSP 1 Score: 1698.3 bits (4397), Expect = 0.0e+00
Identity = 856/968 (88.43%), Postives = 905/968 (93.49%), Query Frame = 0

Query: 1   MDVRSLSNATSTTSSAVFPPPRRRHHH--SHPSSALIVISLKRPPPPPPPSRSDSDDSSG 60
           MDVRSLSNAT+TTSS VF   RRRHHH  SHP  A+I+ SLK PP PP P RSDSDDSS 
Sbjct: 1   MDVRSLSNATTTTSSTVFSSHRRRHHHHYSHPPPAVILFSLK-PPSPPTPPRSDSDDSSS 60

Query: 61  STASISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANVPVLPLPPPPPPPLPVSHS 120
           S+ S+SGRIRRPQ LKT+SSPKRT+S+VPSNPL+NLVGSA VP+  LPPPPPPP PVSHS
Sbjct: 61  SSPSLSGRIRRPQTLKTTSSPKRTSSQVPSNPLRNLVGSAYVPI--LPPPPPPPPPVSHS 120

Query: 121 LGDKLWLSSKLSPPPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPN 180
           L +KLWLSSKLSPPPPPI+E+ EED++E EEIETE+SSS+GRREVQFRQEGK+FVGNLPN
Sbjct: 121 LSEKLWLSSKLSPPPPPISELLEEDQNEIEEIETENSSSKGRREVQFRQEGKVFVGNLPN 180

Query: 181 WIKKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEF 240
           WIKKHEVQ+FFRQFGPV NVILIKGH+ T+RNAGYGF+IYDG TAAKSA+KAVEFDGVEF
Sbjct: 181 WIKKHEVQEFFRQFGPVKNVILIKGHNATERNAGYGFIIYDGPTAAKSAIKAVEFDGVEF 240

Query: 241 HGRVLSVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKGFRMVIETEPEDW 300
           HGRVL+VKLDDGRRLKEK  ERA+WMEGDDSVE+RS WHEERDKAR GFR VIETEPE+W
Sbjct: 241 HGRVLTVKLDDGRRLKEKTNERARWMEGDDSVEYRSHWHEERDKARNGFRKVIETEPENW 300

Query: 301 QAVVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAY 360
           QAVVSAF+RIKKPSRKEY LMVNYYARRGDMHRARETFEKMRARGIEP++HVYTNLIHAY
Sbjct: 301 QAVVSAFDRIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAY 360

Query: 361 AVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKH-SLNA 420
           AVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAE+ADHWFQEAKEKH S+NA
Sbjct: 361 AVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAESADHWFQEAKEKHSSMNA 420

Query: 421 IIYGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFER 480
           IIYGNIIYAYCQ CNMDRAEALVR+MEEEGIDAPIDIYHTMMDGYTMVGDE+KCLLVFER
Sbjct: 421 IIYGNIIYAYCQRCNMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFER 480

Query: 481 FKECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKD 540
           FKECGLNPSVITYGCLINLY KLGKVSKALEVSKEMEHAGIKHNMKT+SMLINGFLKLKD
Sbjct: 481 FKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTFSMLINGFLKLKD 540

Query: 541 WANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMP 600
           WANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRH+PTTRTFMP
Sbjct: 541 WANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMP 600

Query: 601 IIHGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAG 660
           IIHGFAR+G+M+KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKA +ILDEMTLAG
Sbjct: 601 IIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAG 660

Query: 661 VNPNEHTYTTIMHGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSAL 720
           V+PNEHTYTTIMHGYASLGDTGKAF YFTKLRDEGL LDVYTYEALLKACCKSGRMQSAL
Sbjct: 661 VSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLGLDVYTYEALLKACCKSGRMQSAL 720

Query: 721 AVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINAC 780
           AVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADL+QQMK+EGVQPDIHTYTSFINAC
Sbjct: 721 AVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINAC 780

Query: 781 SKAGDMQRATKTIVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDK 840
           SKAGDMQRATKTI EMKS GVKPN+KTYTTLIHGWARASLPEKALSCF EMKLSGLKPDK
Sbjct: 781 SKAGDMQRATKTIEEMKSVGVKPNVKTYTTLIHGWARASLPEKALSCFEEMKLSGLKPDK 840

Query: 841 AVYHCLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGE 900
           AVYHCLMTSLLSRATVA+G IYPGILSVC+EMVD  LTVDMGTAVHWSKCL KIERTGGE
Sbjct: 841 AVYHCLMTSLLSRATVAQGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGE 900

Query: 901 ITEALQKTFPPNWNSYNNVHMSSSLDSDDEYGISDDENEDDDICQEEV-SDARDD----- 960
           ITEALQKTFPPNWN YNN   SS++DSDDE  ISDD  EDDDICQ    S+A DD     
Sbjct: 901 ITEALQKTFPPNWNLYNNTLTSSNIDSDDESDISDD--EDDDICQGGASSNAGDDGESDG 960

BLAST of CmoCh18G009540 vs. ExPASy TrEMBL
Match: A0A6J1D9Q6 (pentatricopeptide repeat-containing protein At5g04810, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018664 PE=4 SV=1)

HSP 1 Score: 1692.2 bits (4381), Expect = 0.0e+00
Identity = 856/973 (87.98%), Postives = 900/973 (92.50%), Query Frame = 0

Query: 1   MDVRSLSNATSTTSSAVFPP--PRRRHHHSHPSSALIVISLKRPPPPP---PPSRSDSDD 60
           MD RSLSN T+TTSSA F    P RR HHSHPSSA+I+ SLK P PPP   P  RSDSDD
Sbjct: 1   MDARSLSNTTTTTSSACFSAVLPHRRRHHSHPSSAVIIFSLKPPLPPPHHSPSPRSDSDD 60

Query: 61  SSGSTASISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANVPVLPLPPPPPPPLP- 120
           SS ST S+SGRIRRPQ LKT+SSPKRTTSKVPSNPLKNLVGSA VPVLP PPPPPPP P 
Sbjct: 61  SSSSTPSLSGRIRRPQTLKTTSSPKRTTSKVPSNPLKNLVGSAYVPVLPPPPPPPPPPPP 120

Query: 121 -VSHSLGDKLWLSSKLSPPPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFV 180
            VS+SL +KLWLSSKLSPPPPP +E  +EDE+E EEI TE+SSS+GR E++ RQEGKIFV
Sbjct: 121 HVSYSLSNKLWLSSKLSPPPPPTSEASDEDENEVEEIVTENSSSKGRGEIELRQEGKIFV 180

Query: 181 GNLPNWIKKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEF 240
           GNLP+WIKKHE+Q+FFRQFGPV NVILIKGHD T+RNAGYGFVIYDG TAAKSAMKAVEF
Sbjct: 181 GNLPSWIKKHELQEFFRQFGPVKNVILIKGHDATERNAGYGFVIYDGLTAAKSAMKAVEF 240

Query: 241 DGVEFHGRVLSVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKGFRMVIET 300
           DGVEFHGRVL+VKLDDGRRLKEK  ERA+WMEGDDSVE+RSQWHEERDKAR GFR VIET
Sbjct: 241 DGVEFHGRVLTVKLDDGRRLKEKTEERARWMEGDDSVEYRSQWHEERDKARNGFRKVIET 300

Query: 301 EPEDWQAVVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTN 360
           EPE+WQAVV AFERIKKPSRKEY LMVNYYARRGDMHRARETFEKMRARGIEPT+HVYTN
Sbjct: 301 EPENWQAVVWAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPTSHVYTN 360

Query: 361 LIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKH 420
           LIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKM NAE+ADHWFQEAKEKH
Sbjct: 361 LIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMRNAESADHWFQEAKEKH 420

Query: 421 -SLNAIIYGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCL 480
            SLNAIIYGNIIYAYCQ CNM+RAEALVRQMEEEGIDAPIDIYHTMMDGYTM+GDE KCL
Sbjct: 421 SSLNAIIYGNIIYAYCQTCNMERAEALVRQMEEEGIDAPIDIYHTMMDGYTMIGDEDKCL 480

Query: 481 LVFERFKECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGF 540
           LVFERFKECGLNPSVITYGCLINLYTKLGKV+KALEVSKEMEHAGIKHNMKTYSMLINGF
Sbjct: 481 LVFERFKECGLNPSVITYGCLINLYTKLGKVAKALEVSKEMEHAGIKHNMKTYSMLINGF 540

Query: 541 LKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTT 600
           LKLKDWANAFAIFEDLI+DGIKPDVVLYNNIITAFCGMGKMDRA+CTVKEMQKQRHRPTT
Sbjct: 541 LKLKDWANAFAIFEDLIRDGIKPDVVLYNNIITAFCGMGKMDRAICTVKEMQKQRHRPTT 600

Query: 601 RTFMPIIHGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDE 660
           RTFMPIIHGFAR+G+MRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDE
Sbjct: 601 RTFMPIIHGFARKGEMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDE 660

Query: 661 MTLAGVNPNEHTYTTIMHGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGR 720
           MTL+GV+PNEHTYTTIMHGYASLGDTGKAF YFTKLR EGL+LDVYTYEALLKACCKSGR
Sbjct: 661 MTLSGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRSEGLELDVYTYEALLKACCKSGR 720

Query: 721 MQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTS 780
           MQSALAVTKEMSAQ IPRNTFIYNILIDGWARRGDVWEAADL+QQMK+EGVQPDIHTYTS
Sbjct: 721 MQSALAVTKEMSAQKIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTS 780

Query: 781 FINACSKAGDMQRATKTIVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSCFAEMKLSG 840
           FINACSKAGDMQRATKTI EM+S GVKPN+KTYTTLIHGWARASLPE ALSCF EMKLSG
Sbjct: 781 FINACSKAGDMQRATKTIEEMRSVGVKPNVKTYTTLIHGWARASLPENALSCFEEMKLSG 840

Query: 841 LKPDKAVYHCLMTSLLSRATV-AEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKI 900
           LKPDKAVYHCLMTSLLSRATV AEGSIYPGILSVC+EMVDSGLTVDMGTAVHWSKCLRKI
Sbjct: 841 LKPDKAVYHCLMTSLLSRATVAAEGSIYPGILSVCREMVDSGLTVDMGTAVHWSKCLRKI 900

Query: 901 ERTGGEITEALQKTFPPNWNSYNNVHMSSSLDSDDEYGISDDENEDDDICQEEVS----- 960
           ERTGGEITEALQKTFPPNWNSY+N   SSS+D++DE  +SD    DDDIC   VS     
Sbjct: 901 ERTGGEITEALQKTFPPNWNSYDNALTSSSVDAEDESDVSD----DDDICHGGVSNADED 960

BLAST of CmoCh18G009540 vs. ExPASy TrEMBL
Match: A0A1S3BFB6 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489379 PE=3 SV=1)

HSP 1 Score: 1688.7 bits (4372), Expect = 0.0e+00
Identity = 855/974 (87.78%), Postives = 904/974 (92.81%), Query Frame = 0

Query: 1   MDVRSLSNATSTTSSAVFPPPRRRHHH--SHPSSALIVISLKRPPPPPPPSRSDSDDSSG 60
           MDVRSLSNAT+TTSS VF   RRRHHH  SHP  A+I+ SLK PP PP P RSDSDDSS 
Sbjct: 14  MDVRSLSNATTTTSSTVFSSHRRRHHHHYSHPPPAVILFSLK-PPSPPTPPRSDSDDSSS 73

Query: 61  STASISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANVPVLPLPPPPPPPLPVSHS 120
           S+ S+SGRIRRPQ LKT+SSPKRT+S+VPSNPL+NLVGSA VP+  LPPPPPPP PVSHS
Sbjct: 74  SSPSLSGRIRRPQTLKTTSSPKRTSSQVPSNPLRNLVGSAYVPI--LPPPPPPPPPVSHS 133

Query: 121 LGDKLWLSSKLSPPPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPN 180
           L +KLWLSSKLSPPPPPI+E+ EED++E EEIETE+SSS+GRREVQFRQEGK+FVGNLPN
Sbjct: 134 LSEKLWLSSKLSPPPPPISELLEEDQNEIEEIETENSSSKGRREVQFRQEGKVFVGNLPN 193

Query: 181 WIKKHEVQQFFRQFGPVNNVILIKGHDTTKRNAG------YGFVIYDGSTAAKSAMKAVE 240
           WIKKHEVQ+FFRQFGPV NVILIKGH+ T+RNAG       GF+IYDG TAAKSA+KAVE
Sbjct: 194 WIKKHEVQEFFRQFGPVKNVILIKGHNATERNAGXXXXXXXGFIIYDGPTAAKSAIKAVE 253

Query: 241 FDGVEFHGRVLSVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKGFRMVIE 300
           FDGVEFHGRVL+VKLDDGRRLKEK  ERA+WMEGDDSVE+RS WHEERDKAR GFR VIE
Sbjct: 254 FDGVEFHGRVLTVKLDDGRRLKEKTNERARWMEGDDSVEYRSHWHEERDKARNGFRKVIE 313

Query: 301 TEPEDWQAVVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYT 360
           TEPE+WQAVVSAF+RIKKPSRKEY LMVNYYARRGDMHRARETFEKMRARGIEP++HVYT
Sbjct: 314 TEPENWQAVVSAFDRIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYT 373

Query: 361 NLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEK 420
           NLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAE+ADHWFQEAKEK
Sbjct: 374 NLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAESADHWFQEAKEK 433

Query: 421 H-SLNAIIYGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKC 480
           H S+NAIIYGNIIYAYCQ CNMDRAEALVR+MEEEGIDAPIDIYHTMMDGYTMVGDE+KC
Sbjct: 434 HSSMNAIIYGNIIYAYCQRCNMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEEKC 493

Query: 481 LLVFERFKECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLING 540
           LLVFERFKECGLNPSVITYGCLINLY KLGKVSKALEVSKEMEHAGIKHNMKT+SMLING
Sbjct: 494 LLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTFSMLING 553

Query: 541 FLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPT 600
           FLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRH+PT
Sbjct: 554 FLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPT 613

Query: 601 TRTFMPIIHGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILD 660
           TRTFMPIIHGFAR+G+M+KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKA +ILD
Sbjct: 614 TRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILD 673

Query: 661 EMTLAGVNPNEHTYTTIMHGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSG 720
           EMTLAGV+PNEHTYTTIMHGYASLGDTGKAF YFTKLRDEGL LDVYTYEALLKACCKSG
Sbjct: 674 EMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLGLDVYTYEALLKACCKSG 733

Query: 721 RMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYT 780
           RMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADL+QQMK+EGVQPDIHTYT
Sbjct: 734 RMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYT 793

Query: 781 SFINACSKAGDMQRATKTIVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSCFAEMKLS 840
           SFINACSKAGDMQRATKTI EMKS GVKPN+KTYTTLIHGWARASLPEKALSCF EMKLS
Sbjct: 794 SFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLIHGWARASLPEKALSCFEEMKLS 853

Query: 841 GLKPDKAVYHCLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKI 900
           GLKPDKAVYHCLMTSLLSRATVA+G IYPGILSVC+EMVD  LTVDMGTAVHWSKCL KI
Sbjct: 854 GLKPDKAVYHCLMTSLLSRATVAQGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKI 913

Query: 901 ERTGGEITEALQKTFPPNWNSYNNVHMSSSLDSDDEYGISDDENEDDDICQEEV-SDARD 960
           ERTGGEITEALQKTFPPNWN YNN   SS++DSDDE  ISDD  EDDDICQ    S+A D
Sbjct: 914 ERTGGEITEALQKTFPPNWNLYNNTLTSSNIDSDDESDISDD--EDDDICQGGASSNAGD 973

BLAST of CmoCh18G009540 vs. TAIR 10
Match: AT5G04810.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 1247.6 bits (3227), Expect = 0.0e+00
Identity = 631/939 (67.20%), Postives = 757/939 (80.62%), Query Frame = 0

Query: 29  HPSSALIVISLKRPPP-PPPPSRSDSDDSSGSTASISGRIRRPQILKTSSSPKRTTSKVP 88
           H   A I  SLK+PPP PP P  S  D            +RRP+    SSS   + S +P
Sbjct: 25  HSPVASISFSLKQPPPQPPEPPESPPD------------LRRPEKSIGSSSSSSSPSPIP 84

Query: 89  S-------NPLKNLVGSANVPVLPLPPPPPPPLPVSHSLGDKLWLSSKLSPPPPPITEIP 148
           S       NPLK L   ++V  L              SL  KL LSSKLSPPPPP    P
Sbjct: 85  SPKTPLKINPLKGLTNRSSVSPLVQSEVSSKVSSFGSSLASKLRLSSKLSPPPPPPPPPP 144

Query: 149 EEDESENEE---IETEDSSSEGRR-EVQFRQEGKIFVGNLPNWIKKHEVQQFFRQFGPVN 208
            E+ ++  +    +T+    E R  + +FRQEGKIFVGNLP WIKK E ++FFRQFGP+ 
Sbjct: 145 VEETTQFRDEFRSDTKPPEEETRNPQQEFRQEGKIFVGNLPTWIKKPEFEEFFRQFGPIE 204

Query: 209 NVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGRVLSVKLDDGRRLKEK 268
           NVILIKGH   ++NAG+GF+IY    A KSAMKAVEFDGVEFHGR+L+VKLDDG+RLK K
Sbjct: 205 NVILIKGHHEVEKNAGFGFIIY---AAEKSAMKAVEFDGVEFHGRILTVKLDDGKRLKTK 264

Query: 269 AYERAKWM---EGDDSVEFRSQWHEERDKARKGFRMVIETEPEDWQAVVSAFERIKKPSR 328
           A +R +W+   E D  +  +S WH+ER+ +RK  + +++T  ++WQAV+SAFE+I KPSR
Sbjct: 265 AEQRVRWVEEGEEDTKMSNKSSWHQEREGSRKSLQRILDTNGDNWQAVISAFEKISKPSR 324

Query: 329 KEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDMEEALSCVRK 388
            E+ LMV +Y RRGDMHRARETFE+MRARGI PT+ +YT+LIHAYAVGRDM+EALSCVRK
Sbjct: 325 TEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRK 384

Query: 389 MKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKH-SLNAIIYGNIIYAYCQICN 448
           MKEEGIEMSLVTYS++VGGF+K G+AEAAD+WF EAK  H +LNA IYG IIYA+CQ CN
Sbjct: 385 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCN 444

Query: 449 MDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERFKECGLNPSVITYGC 508
           M+RAEALVR+MEEEGIDAPI IYHTMMDGYTMV DEKK L+VF+R KECG  P+V+TYGC
Sbjct: 445 MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGC 504

Query: 509 LINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG 568
           LINLYTK+GK+SKALEVS+ M+  G+KHN+KTYSM+INGF+KLKDWANAFA+FED++K+G
Sbjct: 505 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 564

Query: 569 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFARQGDMRKAL 628
           +KPDV+LYNNII+AFCGMG MDRA+ TVKEMQK RHRPTTRTFMPIIHG+A+ GDMR++L
Sbjct: 565 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 624

Query: 629 DVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVNPNEHTYTTIMHGY 688
           +VFDMMR  GC+PTVHT+N LI GLVEKR+MEKAVEILDEMTLAGV+ NEHTYT IM GY
Sbjct: 625 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 684

Query: 689 ASLGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNT 748
           AS+GDTGKAF YFT+L++EGL +D++TYEALLKACCKSGRMQSALAVTKEMSA+NIPRN+
Sbjct: 685 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 744

Query: 749 FIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQRATKTIVE 808
           F+YNILIDGWARRGDVWEAADLIQQMKKEGV+PDIHTYTSFI+ACSKAGDM RAT+TI E
Sbjct: 745 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 804

Query: 809 MKSAGVKPNIKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVYHCLMTSLLSRAT 868
           M++ GVKPNIKTYTTLI GWARASLPEKALSC+ EMK  G+KPDKAVYHCL+TSLLSRA+
Sbjct: 805 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 864

Query: 869 VAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEALQKTFPPNWNS 928
           +AE  IY G++++CKEMV++GL VDMGTAVHWSKCL KIE +GGE+TE LQKTFPP+W+S
Sbjct: 865 IAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTETLQKTFPPDWSS 924

Query: 929 YNNVH----MSSSLDSDDEYGISDDENEDDDICQEEVSD 948
           +++ H      S +DSD++    +D  +D+D+    VSD
Sbjct: 925 HHHHHGFLDQVSDVDSDEDDVDGEDGEDDEDV--NSVSD 946

BLAST of CmoCh18G009540 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 245.0 bits (624), Expect = 2.5e-64
Identity = 145/536 (27.05%), Postives = 264/536 (49.25%), Query Frame = 0

Query: 346 PTTHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGN-AEAADH 405
           PT   ++ L  A A  +  +  L+  ++M+ +GI  +L T SI++  F +      A   
Sbjct: 86  PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145

Query: 406 WFQEAKEKHSLNAIIYGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTM 465
             +  K  +  N I +  +I   C    +  A  LV +M E G    +   +T+++G  +
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205

Query: 466 VGDEKKCLLVFERFKECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKT 525
            G E + +L+ ++  E G  P+ +TYG ++N+  K G+ + A+E+ ++ME   IK +   
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 526 YSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQ 585
           YS++I+G  K     NAF +F ++   GI  +++ YN +I  FC  G+ D     +++M 
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325

Query: 586 KQRHRPTTRTFMPIIHGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKME 645
           K++  P   TF  +I  F ++G +R+A ++   M   G  P   TY +LI G  ++  ++
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385

Query: 646 KAVEILDEMTLAGVNPNEHTYTTIMHGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALL 705
           KA +++D M   G +PN  T+  +++GY            F K+   G+  D  TY  L+
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445

Query: 706 KACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQ 765
           +  C+ G++  A  + +EM ++ +P N   Y IL+DG    G+  +A ++ ++++K  ++
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505

Query: 766 PDIHTYTSFINACSKAGDMQRATKTIVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSC 825
            DI  Y   I+    A  +  A      +   GVKP +KTY  +I G  +     +A   
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565

Query: 826 FAEMKLSGLKPDKAVYHCLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGT 881
           F +M+  G  PD   Y     ++L RA + +G     +  + +E+   G +VD  T
Sbjct: 566 FRKMEEDGHAPDGWTY-----NILIRAHLGDGDATKSV-KLIEELKRCGFSVDAST 615

BLAST of CmoCh18G009540 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 243.8 bits (621), Expect = 5.6e-64
Identity = 139/499 (27.86%), Postives = 248/499 (49.70%), Query Frame = 0

Query: 316 YSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDMEEALSCVRKMK 375
           YS+ +N + RR  +  A     KM   G EP     ++L++ Y   + + +A++ V +M 
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180

Query: 376 EEGIEMSLVTYSILVGG-FAKMGNAEAADHWFQEAKEKHSLNAIIYGNIIYAYCQICNMD 435
           E G +    T++ L+ G F     +EA     Q  +     + + YG ++   C+  ++D
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240

Query: 436 RAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERFKECGLNPSVITYGCLI 495
            A +L+++ME+  I+A + IY+T++DG          L +F      G+ P V TY  LI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300

Query: 496 NLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 555
           +     G+ S A  +  +M    I  N+ T+S LI+ F+K      A  +++++IK  I 
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 556 PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFARQGDMRKALDV 615
           PD+  Y+++I  FC   ++D A    + M  +   P   T+  +I GF +   + + +++
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420

Query: 616 FDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVNPNEHTYTTIMHGYAS 675
           F  M   G +    TY  LI G  + R  + A  +  +M   GV+PN  TY  ++ G   
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480

Query: 676 LGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFI 735
            G   KA V F  L+   ++ D+YTY  +++  CK+G+++    +   +S + +  N   
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540

Query: 736 YNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQRATKTIVEMK 795
           YN +I G+ R+G   EA  L+++MK++G  P+  TY + I A  + GD + + + I EM+
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600

Query: 796 SAGVKPNIKT---YTTLIH 811
           S G   +  T    T ++H
Sbjct: 601 SCGFAGDASTIGLVTNMLH 619

BLAST of CmoCh18G009540 vs. TAIR 10
Match: AT5G12100.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 241.9 bits (616), Expect = 2.1e-63
Identity = 153/537 (28.49%), Postives = 253/537 (47.11%), Query Frame = 0

Query: 311 PSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDMEEALSC 370
           PS    +L++++  +          F  +      P+  +Y   I A     D+ + L  
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201

Query: 371 VRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHSLNAII-YGNIIYAYCQ 430
             +MK + I  S+  Y++L+ G  K      A+  F E   +  L ++I Y  +I  YC+
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261

Query: 431 ICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERFKECGLNPSVIT 490
             N +++  +  +M+ + I+  +  ++T++ G    G  +    V +  K+ G  P   T
Sbjct: 262 AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321

Query: 491 YGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLI 550
           +  L + Y+   K   AL V +    +G+K N  T S+L+N   K      A  I    +
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381

Query: 551 KDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFARQGDMR 610
             G+ P+ V+YN +I  +C  G +  A   ++ M+KQ  +P    +  +I  F   G+M 
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441

Query: 611 KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVNPNEHTYTTIM 670
            A    + M++ G  P+V TYN LI G   K + +K  +IL EM   G  PN  +Y T++
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501

Query: 671 HGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIP 730
           +         +A +    + D G+   V  Y  L+  CC  G+++ A   +KEM  + I 
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561

Query: 731 RNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQRATKT 790
            N   YN LIDG +  G + EA DL+ ++ ++G++PD+ TY S I+    AG++QR    
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621

Query: 791 IVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVY----HC 843
             EMK +G+KP +KTY  LI    +  + E     F EM    LKPD  VY    HC
Sbjct: 622 YEEMKRSGIKPTLKTYHLLISLCTKEGI-ELTERLFGEM---SLKPDLLVYNGVLHC 674

BLAST of CmoCh18G009540 vs. TAIR 10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 238.8 bits (608), Expect = 1.8e-62
Identity = 142/539 (26.35%), Postives = 262/539 (48.61%), Query Frame = 0

Query: 346 PTTHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHW 405
           PT   +  L  A A  +  E  L+  ++M+ +GI  S+ T SI++  F +      A   
Sbjct: 86  PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145

Query: 406 FQE-AKEKHSLNAIIYGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTM 465
             +  K  +  + +I+  ++   C  C +  A  LV +M E G    +   +T+++G  +
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205

Query: 466 VGDEKKCLLVFERFKECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKT 525
            G     +++ +R  E G  P+ +TYG ++N+  K G+ + A+E+ ++ME   IK +   
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 526 YSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQ 585
           YS++I+G  K     NAF +F ++   G K D++ YN +I  FC  G+ D     +++M 
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325

Query: 586 KQRHRPTTRTFMPIIHGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKME 645
           K++  P   TF  +I  F ++G +R+A  +   M   G  P   TYN+LI G  ++ ++E
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385

Query: 646 KAVEILDEMTLAGVNPNEHTYTTIMHGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALL 705
           +A++++D M   G +P+  T+  +++GY            F ++   G+  +  TY  L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445

Query: 706 KACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQ 765
           +  C+SG+++ A  + +EM ++ +  +   Y IL+DG    G++ +A ++  +++K  ++
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505

Query: 766 PDIHTYTSFINACSKAGDMQRATKTIVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSC 825
            DI  Y   I+    A  +  A      +   GVK + + Y  +I    R     KA   
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565

Query: 826 FAEMKLSGLKPDKAVYHCLMTSLL---SRATVAEGSIYPGILSVCKEMVDSGLTVDMGT 881
           F +M   G  PD+  Y+ L+ + L      T AE         + +EM  SG   D+ T
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAE---------LIEEMKSSGFPADVST 615

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q0WMY50.0e+0067.20Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidop... [more]
Q0WKV33.5e-6327.05Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... [more]
Q9LQ167.8e-6327.86Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX... [more]
Q9FMQ13.0e-6228.49Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidop... [more]
Q9LPX22.5e-6126.35Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1FZV70.0e+00100.00pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Cucurbit... [more]
A0A6J1HUK80.0e+0096.48pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Cucurbit... [more]
A0A5D3CFW50.0e+0088.43Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1D9Q60.0e+0087.98pentatricopeptide repeat-containing protein At5g04810, chloroplastic isoform X1 ... [more]
A0A1S3BFB60.0e+0087.78LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g04810, chlo... [more]
Match NameE-valueIdentityDescription
AT5G04810.10.0e+0067.20pentatricopeptide (PPR) repeat-containing protein [more]
AT1G12300.12.5e-6427.05Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G62910.15.6e-6427.86Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G12100.12.1e-6328.49pentatricopeptide (PPR) repeat-containing protein [more]
AT1G12775.11.8e-6226.35Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 170..246
e-value: 9.4E-18
score: 75.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 171..243
e-value: 4.0E-13
score: 49.0
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 169..250
score: 16.261356
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 707..844
e-value: 5.3E-15
score: 55.3
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 544..598
e-value: 4.2E-9
score: 36.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 625..673
e-value: 8.2E-15
score: 54.7
coord: 485..533
e-value: 2.0E-11
score: 43.9
coord: 346..395
e-value: 2.2E-10
score: 40.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 419..448
e-value: 0.0036
score: 17.5
coord: 316..344
e-value: 6.8E-4
score: 19.7
coord: 454..483
e-value: 0.011
score: 15.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 768..802
e-value: 3.1E-7
score: 28.1
coord: 384..412
e-value: 0.0023
score: 16.0
coord: 558..591
e-value: 4.0E-5
score: 21.5
coord: 628..662
e-value: 8.1E-7
score: 26.8
coord: 419..448
e-value: 1.6E-4
score: 19.6
coord: 524..557
e-value: 7.0E-7
score: 27.0
coord: 594..626
e-value: 4.1E-8
score: 30.9
coord: 350..382
e-value: 2.6E-6
score: 25.2
coord: 488..521
e-value: 5.7E-6
score: 24.2
coord: 734..767
e-value: 8.8E-7
score: 26.7
coord: 454..486
e-value: 2.4E-4
score: 19.0
coord: 663..697
e-value: 8.6E-6
score: 23.6
coord: 804..836
e-value: 4.9E-8
score: 30.7
coord: 698..731
e-value: 6.4E-6
score: 24.0
coord: 316..347
e-value: 5.5E-7
score: 27.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 312..346
score: 11.454616
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 661..695
score: 10.05157
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 521..555
score: 11.41077
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 591..625
score: 11.432693
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 347..381
score: 10.237912
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 626..660
score: 11.377887
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 451..485
score: 8.681407
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 766..800
score: 12.068449
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 556..590
score: 10.961357
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 416..450
score: 9.898111
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 801..835
score: 11.849223
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 731..765
score: 12.572669
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 486..520
score: 10.413293
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 696..730
score: 11.23539
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 137..261
e-value: 5.0E-21
score: 77.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 291..397
e-value: 1.0E-26
score: 95.4
coord: 500..600
e-value: 1.8E-26
score: 94.6
coord: 601..714
e-value: 2.5E-35
score: 123.5
coord: 398..499
e-value: 2.9E-19
score: 71.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 715..922
e-value: 9.6E-42
score: 145.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 926..946
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 922..959
NoneNo IPR availablePANTHERPTHR47939MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKEcoord: 18..939
NoneNo IPR availablePANTHERPTHR47939:SF1OS04G0684500 PROTEINcoord: 18..939
NoneNo IPR availableCDDcd00590RRM_SFcoord: 171..246
e-value: 1.39153E-16
score: 73.1081
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 316..489
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 164..252

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G009540.1CmoCh18G009540.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding