CmoCh18G006880 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAAGGCCGGAGTTGATCATAAGATCAATTTTGTAGAAGCACAGGCGTCGGTCTTTCTCCACGACCTCGTCAATGATGTAAGTCGTTATTGCGCAAGGAAAAAGAAAATTTTAAAAGTTGTTTGGCAATAATATTGATTGTCGTGTATTTAATTTAAAATACGATACTGTATATTAATTTCATCAATTCATATTTCGTATTAAATTAAATATTATGTATTTTTTTCTCATTGAACAGGGAAAAGAAGGAGAATTTGATTTTGCATTTGTGGATGCTAACAAAGAATGGTACATTAAATATCACAAATTTCTCTTGAAACTGGTGAAGGTAGGTGGAGTGATTGCATACGACAATACCTTATAGTTTGGATCAGTGGCACAGAGCGAAGACAACATTGATGAAAATTTAAAGGTTAATAGAAGTCATCTACGAGAACTCAATGCTTTTCTTATTAATGACTCGTGCATTAAGATAGCTCTCCTCTCTATTGGAGATTGTCTCACTCTCCGCAGGCGTATTCAGTAA ATGAAAAAGGCCGGAGTTGATCATAAGATCAATTTTGTAGAAGCACAGGCGTCGGTCTTTCTCCACGACCTCGTCAATGATGGAAAAGAAGGAGAATTTGATTTTGCATTTGTGGATGCTAACAAAGAATGGTACATTAAATATCACAAATTTCTCTTGAAACTGGTGAAGTTTGGATCAGTGGCACAGAGCGAAGACAACATTGATGAAAATTTAAAGGTTAATAGAAGTCATCTACGAGAACTCAATGCTTTTCTTATTAATGACTCGTGCATTAAGATAGCTCTCCTCTCTATTGGAGATTGTCTCACTCTCCGCAGGCGTATTCAGTAA ATGAAAAAGGCCGGAGTTGATCATAAGATCAATTTTGTAGAAGCACAGGCGTCGGTCTTTCTCCACGACCTCGTCAATGATGGAAAAGAAGGAGAATTTGATTTTGCATTTGTGGATGCTAACAAAGAATGGTACATTAAATATCACAAATTTCTCTTGAAACTGGTGAAGTTTGGATCAGTGGCACAGAGCGAAGACAACATTGATGAAAATTTAAAGGTTAATAGAAGTCATCTACGAGAACTCAATGCTTTTCTTATTAATGACTCGTGCATTAAGATAGCTCTCCTCTCTATTGGAGATTGTCTCACTCTCCGCAGGCGTATTCAGTAA MKKAGVDHKINFVEAQASVFLHDLVNDGKEGEFDFAFVDANKEWYIKYHKFLLKLVKFGSVAQSEDNIDENLKVNRSHLRELNAFLINDSCIKIALLSIGDCLTLRRRIQ Homology
BLAST of CmoCh18G006880 vs. ExPASy Swiss-Prot
Match: C7AE94 (Flavonoid 3',5'-methyltransferase OS=Vitis vinifera OX=29760 GN=FAOMT PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.2e-20 Identity = 58/123 (47.15%), Postives = 82/123 (66.67%), Query Frame = 0
BLAST of CmoCh18G006880 vs. ExPASy Swiss-Prot
Match: Q9C9W3 (Putative caffeoyl-CoA O-methyltransferase At1g67980 OS=Arabidopsis thaliana OX=3702 GN=At1g67980 PE=2 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18 Identity = 54/121 (44.63%), Postives = 75/121 (61.98%), Query Frame = 0
BLAST of CmoCh18G006880 vs. ExPASy Swiss-Prot
Match: Q9C9W4 (Tapetum-specific methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=TSM1 PE=1 SV=2) HSP 1 Score: 91.7 bits (226), Expect = 5.7e-18 Identity = 54/121 (44.63%), Postives = 76/121 (62.81%), Query Frame = 0
BLAST of CmoCh18G006880 vs. ExPASy Swiss-Prot
Match: P93711 (Caffeoyl-CoA O-methyltransferase OS=Populus kitakamiensis OX=34292 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.7e-17 Identity = 48/122 (39.34%), Postives = 78/122 (63.93%), Query Frame = 0
BLAST of CmoCh18G006880 vs. ExPASy Swiss-Prot
Match: O04854 (Caffeoyl-CoA O-methyltransferase OS=Eucalyptus gunnii OX=3933 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.4e-16 Identity = 51/123 (41.46%), Postives = 71/123 (57.72%), Query Frame = 0
BLAST of CmoCh18G006880 vs. ExPASy TrEMBL
Match: A0A6J1HQ49 (flavonoid 3',5'-methyltransferase-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466357 PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42 Identity = 96/122 (78.69%), Postives = 104/122 (85.25%), Query Frame = 0
BLAST of CmoCh18G006880 vs. ExPASy TrEMBL
Match: A0A6J1G1C2 (flavonoid 3',5'-methyltransferase-like OS=Cucurbita moschata OX=3662 GN=LOC111449787 PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.5e-40 Identity = 94/122 (77.05%), Postives = 102/122 (83.61%), Query Frame = 0
BLAST of CmoCh18G006880 vs. ExPASy TrEMBL
Match: A0A6J1HNS8 (flavonoid 3',5'-methyltransferase-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111466357 PE=3 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.1e-35 Identity = 83/122 (68.03%), Postives = 98/122 (80.33%), Query Frame = 0
BLAST of CmoCh18G006880 vs. ExPASy TrEMBL
Match: A0A6J1HT22 (flavonoid 3',5'-methyltransferase-like OS=Cucurbita maxima OX=3661 GN=LOC111466358 PE=3 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 5.3e-35 Identity = 81/122 (66.39%), Postives = 99/122 (81.15%), Query Frame = 0
BLAST of CmoCh18G006880 vs. ExPASy TrEMBL
Match: A0A6J1HUP0 (flavonoid 3',5'-methyltransferase-like OS=Cucurbita maxima OX=3661 GN=LOC111466359 PE=3 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 9.1e-35 Identity = 81/122 (66.39%), Postives = 95/122 (77.87%), Query Frame = 0
BLAST of CmoCh18G006880 vs. TAIR 10
Match: AT1G67980.1 (caffeoyl-CoA 3-O-methyltransferase ) HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19 Identity = 54/121 (44.63%), Postives = 75/121 (61.98%), Query Frame = 0
BLAST of CmoCh18G006880 vs. TAIR 10
Match: AT1G67980.2 (caffeoyl-CoA 3-O-methyltransferase ) HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19 Identity = 54/121 (44.63%), Postives = 75/121 (61.98%), Query Frame = 0
BLAST of CmoCh18G006880 vs. TAIR 10
Match: AT1G67990.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 91.7 bits (226), Expect = 4.1e-19 Identity = 54/121 (44.63%), Postives = 76/121 (62.81%), Query Frame = 0
BLAST of CmoCh18G006880 vs. TAIR 10
Match: AT1G24735.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 85.9 bits (211), Expect = 2.2e-17 Identity = 47/121 (38.84%), Postives = 73/121 (60.33%), Query Frame = 0
BLAST of CmoCh18G006880 vs. TAIR 10
Match: AT1G24735.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 85.9 bits (211), Expect = 2.2e-17 Identity = 47/121 (38.84%), Postives = 73/121 (60.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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