CmoCh17G013530 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G013530
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	light-regulated protein-like
Location	Cmo_Chr17: 10532341 .. 10532946 (+)
RNA-Seq Expression	CmoCh17G013530
Synteny	CmoCh17G013530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGTTGCAGGCAGCTCCTTCCCTGGCACATCCATCTTCATGCTACCTTCTCCCACCAACTACCAAATTGATGGCGTTCTCAATCCCATCTAGGTCCATGCGAAGGCACCCCACCTCACAAACTCATCGCCCCATCCTAAAAGCGAAGGCAAGTGCGGTTGGACAAGACCCTTCAACGGTTGACTACAGCTCCATGTCCTCGTAAGCTAAATCATTTTAGTTCTCATTGTTACACAACAATATATCAGATTCAATACCTTCATTTGCCCTTCTGTGTTGGTTTTTGGAAGTGTTTTTCCAGCAGAGGCTTGTGAAACTGTTGGAGGTGAAGCTTGTGATGTCGAAATGTATCCTGAAGTAAAGCTAAAACCAGAGGCTAAAAAGGGAGGCAGTGTTTCAGAGGCAGTTGATAGAGAGTATCTACAATATGACAGTCCTAAGACGTAAGATCTCTCATTTCCTATGAAACAACACTATTTCATGCTTCAATATGCATTGATAATCTTGGTTTTTTAATGATTGCTGCAGAGTCTTTCCTGCGGAGGCTTGTGATGATCTGGGTGGTGAATTCTGTGATCCAGAGTATCAAAAGGGAGTTTACTAG

mRNA sequence

ATGCAGTTGCAGGCAGCTCCTTCCCTGGCACATCCATCTTCATGCTACCTTCTCCCACCAACTACCAAATTGATGGCGTTCTCAATCCCATCTAGGTCCATGCGAAGGCACCCCACCTCACAAACTCATCGCCCCATCCTAAAAGCGAAGGCAAGTGCGGTTGGACAAGACCCTTCAACGGTTGACTACAGCTCCATGTCCTCATTCAATACCTTCATTTGCCCTTCTGTGTTGGTTTTTGGAAGTGTTTTTCCAGCAGAGGCTTGTGAAACTGTTGGAGGTGAAGCTTGTGATGTCGAAATGTATCCTGAAGTAAAGCTAAAACCAGAGGCTAAAAAGGGAGGCAGTGTTTCAGAGGCAGTTGATAGAGAGTATCTACAATATGACAGTCCTAAGACAGTCTTTCCTGCGGAGGCTTGTGATGATCTGGGTGGTGAATTCTGTGATCCAGAGTATCAAAAGGGAGTTTACTAG

Coding sequence (CDS)

ATGCAGTTGCAGGCAGCTCCTTCCCTGGCACATCCATCTTCATGCTACCTTCTCCCACCAACTACCAAATTGATGGCGTTCTCAATCCCATCTAGGTCCATGCGAAGGCACCCCACCTCACAAACTCATCGCCCCATCCTAAAAGCGAAGGCAAGTGCGGTTGGACAAGACCCTTCAACGGTTGACTACAGCTCCATGTCCTCATTCAATACCTTCATTTGCCCTTCTGTGTTGGTTTTTGGAAGTGTTTTTCCAGCAGAGGCTTGTGAAACTGTTGGAGGTGAAGCTTGTGATGTCGAAATGTATCCTGAAGTAAAGCTAAAACCAGAGGCTAAAAAGGGAGGCAGTGTTTCAGAGGCAGTTGATAGAGAGTATCTACAATATGACAGTCCTAAGACAGTCTTTCCTGCGGAGGCTTGTGATGATCTGGGTGGTGAATTCTGTGATCCAGAGTATCAAAAGGGAGTTTACTAG

Protein sequence

MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPSTVDYSSMSSFNTFICPSVLVFGSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEAVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY

Homology

[Close]

BLAST of CmoCh17G013530 vs. ExPASy Swiss-Prot
Match: Q96500 (Light-regulated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIR1 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-24
Identity = 67/147 (45.58%), Postives = 88/147 (59.86%), Query Frame = 0


Query: 8   SLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPSTVDYSSMS 67
           S++ P   +LLP  TK    S    S+R + +S          +S++  DP+TVDY+S  
Sbjct: 18  SVSSPKLTFLLPHATKASRLS----SLRSNNSS---------SSSSLTSDPNTVDYNS-- 77

Query: 68  SFNTFICPSVLVFGSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEAVDREYLQ 127
                   S+L   SVFPAEACE + G AC  ++YPEVKL  +       SE VDREY +
Sbjct: 78  --------SIL---SVFPAEACEVISGYACSADIYPEVKLDTKPVSRPVASEPVDREYEE 137

Query: 128 YDSPKTVFPAEACDDLGGEFCDPEYQK 155
           Y+SPKTVF  EACDDLGGEFC+P++QK
Sbjct: 138 YNSPKTVFREEACDDLGGEFCEPDFQK 138

[Close]

BLAST of CmoCh17G013530 vs. ExPASy Swiss-Prot
Match: Q03200 (Light-regulated protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=LIR1 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.9e-21
Identity = 54/104 (51.92%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 47  LKAKASAVGQDPSTVDYSSMSSFNTFICPSVLVFGSVFPAEACETVGGEACDVEMYPEVK 106
           ++A A+AV  + + VDYSS                SVFP EAC+ +GGEAC+V+MYPE K
Sbjct: 36  VRAAAAAVAVEAAEVDYSSNI--------------SVFPMEACDLIGGEACNVQMYPEAK 95

Query: 107 LKPEAKKGGS--VSEAVDREYLQYDSPKTVFPAEACDDLGGEFC 149
           L   A    S   +E VDR+YL YD P TVFP EACDDLGGEFC
Sbjct: 96  LSSSAAVAVSRAAAEEVDRDYLSYDEPTTVFPEEACDDLGGEFC 125

[Close]

BLAST of CmoCh17G013530 vs. ExPASy TrEMBL
Match: A0A6J1GNA5 (light-regulated protein-like OS=Cucurbita moschata OX=3662 GN=LOC111456061 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 9.2e-73
Identity = 143/157 (91.08%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60
           MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 61  VDYSSMSSFNTFICPSVLVFGSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA 120
           VDYSSMS              SVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA
Sbjct: 61  VDYSSMS--------------SVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA 120

Query: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 158
           VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of CmoCh17G013530 vs. ExPASy TrEMBL
Match: A0A6J1JSC1 (light-regulated protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111488476 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.5e-72
Identity = 141/157 (89.81%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60
           MQLQAAPSLAHPSSCYLLPPTTKLMAFS+PSRSMRRHPTSQTHRPILKAKASAVGQDPST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSVPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 61  VDYSSMSSFNTFICPSVLVFGSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA 120
           VDYSS+S              SVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA
Sbjct: 61  VDYSSVS--------------SVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA 120

Query: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 158
           VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of CmoCh17G013530 vs. ExPASy TrEMBL
Match: Q39636 (CR9 protein OS=Cucumis sativus OX=3659 GN=CR9 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.6e-53
Identity = 118/157 (75.16%), Postives = 124/157 (78.98%), Query Frame = 0


Query: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60
           MQ QAA S+A P SC LLPPT K MAFSIP+RSM R       +  LKAKASAVGQDPST
Sbjct: 1   MQFQAALSIASP-SCSLLPPTAKSMAFSIPTRSMPRQ-----SKGTLKAKASAVGQDPST 60

Query: 61  VDYSSMSSFNTFICPSVLVFGSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA 120
           VDYSSMS              SVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKG SV+E 
Sbjct: 61  VDYSSMS--------------SVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEP 120

Query: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 158
           V+REYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 VEREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 137

[Close]

BLAST of CmoCh17G013530 vs. ExPASy TrEMBL
Match: A0A5D3DLY7 (Light-regulated protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001960 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 8.1e-53
Identity = 117/157 (74.52%), Postives = 125/157 (79.62%), Query Frame = 0


Query: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60
           MQLQAA S+A P SC LLPPT KLMAFSI +RS+ R       +  LKAKASAVGQ+PST
Sbjct: 1   MQLQAALSIA-PPSCSLLPPTAKLMAFSIQTRSLPRQ-----SKGTLKAKASAVGQEPST 60

Query: 61  VDYSSMSSFNTFICPSVLVFGSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA 120
           VDYSSMS              SVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKG SV+E 
Sbjct: 61  VDYSSMS--------------SVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEP 120

Query: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 158
           V+REYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 VEREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 137

[Close]

BLAST of CmoCh17G013530 vs. ExPASy TrEMBL
Match: A0A1S3CBQ8 (light-regulated protein-like OS=Cucumis melo OX=3656 GN=LOC103498886 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.1e-52
Identity = 117/157 (74.52%), Postives = 125/157 (79.62%), Query Frame = 0


Query: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60
           MQLQAA S+A P SC LLPPT KLMAFSI +RS+ R       +  LKAKASAVGQ+PST
Sbjct: 1   MQLQAALSIA-PPSCSLLPPTAKLMAFSIQTRSLPRQ-----SQGTLKAKASAVGQEPST 60

Query: 61  VDYSSMSSFNTFICPSVLVFGSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA 120
           VDYSSMS              SVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKG SV+E 
Sbjct: 61  VDYSSMS--------------SVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEP 120

Query: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 158
           V+REYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 VEREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 137

[Close]

BLAST of CmoCh17G013530 vs. NCBI nr
Match: XP_022953556.1 (light-regulated protein-like [Cucurbita moschata] >KAG7014620.1 Light-regulated protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 282.7 bits (722), Expect = 1.9e-72
Identity = 143/157 (91.08%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60
           MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 61  VDYSSMSSFNTFICPSVLVFGSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA 120
           VDYSSMS              SVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA
Sbjct: 61  VDYSSMS--------------SVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA 120

Query: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 158
           VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of CmoCh17G013530 vs. NCBI nr
Match: XP_022991991.1 (light-regulated protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 280.8 bits (717), Expect = 7.2e-72
Identity = 141/157 (89.81%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60
           MQLQAAPSLAHPSSCYLLPPTTKLMAFS+PSRSMRRHPTSQTHRPILKAKASAVGQDPST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSVPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 61  VDYSSMSSFNTFICPSVLVFGSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA 120
           VDYSS+S              SVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA
Sbjct: 61  VDYSSVS--------------SVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA 120

Query: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 158
           VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of CmoCh17G013530 vs. NCBI nr
Match: XP_023547464.1 (light-regulated protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278.9 bits (712), Expect = 2.7e-71
Identity = 141/157 (89.81%), Postives = 142/157 (90.45%), Query Frame = 0


Query: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60
           MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRS RRHPTSQTHRPILKAKASAVGQDPST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSKRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 61  VDYSSMSSFNTFICPSVLVFGSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA 120
           VDYSS+S              SVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA
Sbjct: 61  VDYSSVS--------------SVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA 120

Query: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 158
           VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of CmoCh17G013530 vs. NCBI nr
Match: KAG6576101.1 (Light-regulated protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.4 bits (677), Expect = 3.1e-67
Identity = 135/151 (89.40%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60
           MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 61  VDYSSMSSFNTFICPSVLVFGSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA 120
           VDYSSMS              SVFPAEACETVGGEACDVEMYPEVKLKPEAK GGSVSEA
Sbjct: 61  VDYSSMS--------------SVFPAEACETVGGEACDVEMYPEVKLKPEAKMGGSVSEA 120

Query: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPE 152
           VDREYLQYDSPKTVFPAEACDDLGGEFCDP+
Sbjct: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPD 137

[Close]

BLAST of CmoCh17G013530 vs. NCBI nr
Match: XP_038906788.1 (light-regulated protein, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 246.1 bits (627), Expect = 2.0e-61
Identity = 127/157 (80.89%), Postives = 133/157 (84.71%), Query Frame = 0


Query: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60
           MQLQAA S+A PSSC LLPPT K MAFS+ SRS+ RHPTSQT RPILKAKASAVGQDPST
Sbjct: 1   MQLQAALSVATPSSCSLLPPTAKSMAFSVRSRSIGRHPTSQTQRPILKAKASAVGQDPST 60

Query: 61  VDYSSMSSFNTFICPSVLVFGSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEA 120
           VDYSS+S              SVFPAEAC+TVGGEACDVEMYPEVKLKPEAKK GSV+E 
Sbjct: 61  VDYSSIS--------------SVFPAEACDTVGGEACDVEMYPEVKLKPEAKKQGSVTEP 120

Query: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 158
           VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of CmoCh17G013530 vs. TAIR 10
Match: AT3G26740.1 (CCR-like )

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25
Identity = 67/147 (45.58%), Postives = 88/147 (59.86%), Query Frame = 0


Query: 8   SLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPSTVDYSSMS 67
           S++ P   +LLP  TK    S    S+R + +S          +S++  DP+TVDY+S  
Sbjct: 18  SVSSPKLTFLLPHATKASRLS----SLRSNNSS---------SSSSLTSDPNTVDYNS-- 77

Query: 68  SFNTFICPSVLVFGSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEAVDREYLQ 127
                   S+L   SVFPAEACE + G AC  ++YPEVKL  +       SE VDREY +
Sbjct: 78  --------SIL---SVFPAEACEVISGYACSADIYPEVKLDTKPVSRPVASEPVDREYEE 137

Query: 128 YDSPKTVFPAEACDDLGGEFCDPEYQK 155
           Y+SPKTVF  EACDDLGGEFC+P++QK
Sbjct: 138 YNSPKTVFREEACDDLGGEFCEPDFQK 138

The following BLAST results are available for this feature:

BLAST of CmoCh17G013530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96500	1.5e-24	45.58	Light-regulated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIR1...	[more]
Q03200	7.9e-21	51.92	Light-regulated protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of CmoCh17G013530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GNA5	9.2e-73	91.08	light-regulated protein-like OS=Cucurbita moschata OX=3662 GN=LOC111456061 PE=4 ...	[more]
A0A6J1JSC1	3.5e-72	89.81	light-regulated protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
Q39636	1.6e-53	75.16	CR9 protein OS=Cucumis sativus OX=3659 GN=CR9 PE=2 SV=1	[more]
A0A5D3DLY7	8.1e-53	74.52	Light-regulated protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CBQ8	1.1e-52	74.52	light-regulated protein-like OS=Cucumis melo OX=3656 GN=LOC103498886 PE=4 SV=1	[more]

BLAST of CmoCh17G013530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953556.1	1.9e-72	91.08	light-regulated protein-like [Cucurbita moschata] >KAG7014620.1 Light-regulated ...	[more]
XP_022991991.1	7.2e-72	89.81	light-regulated protein, chloroplastic-like [Cucurbita maxima]	[more]
XP_023547464.1	2.7e-71	89.81	light-regulated protein, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
KAG6576101.1	3.1e-67	89.40	Light-regulated protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp....	[more]
XP_038906788.1	2.0e-61	80.89	light-regulated protein, chloroplastic-like [Benincasa hispida]	[more]

BLAST of CmoCh17G013530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26740.1	1.1e-25	45.58	CCR-like	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009856	Light regulated Lir1	PFAM	PF07207	Lir1	coord: 4..149 e-value: 7.4E-38 score: 129.8
IPR009856	Light regulated Lir1	PANTHER	PTHR36762	LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC	coord: 19..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G013530.1	CmoCh17G013530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast