CmoCh17G013350 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh17G013350
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionEmbryo sac development arrest protein
LocationCmo_Chr17: 10456859 .. 10457269 (+)
RNA-Seq ExpressionCmoCh17G013350
SyntenyCmoCh17G013350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGACTAATGACCTCAGATGGGCCCAGTTCCAGGCCCAATAAGAGGAAAGAGAGAAAGGGCTTTGATGATGAGGCCCACCAACTGTCATTCACAGCTAAAGTATCGAAGCCGACACCGCCTCAATCCAACCACCTCCTAGCCGGCTACTTGGCTCACGAGTTCTTCACCAAAGGCACCCTCTTTGGCCAAGCTTGGGATCATCCGGATGTGTCTATGGCGGCTTCACCACCTGACCTCAACGAGAAACGCCAAGCCGAGCTGCATCCCAAGAATTACCAGTCCTACGTGGAGGTGGCTAATTTGTTGAAACATGGTGGGGCCCACTTTCAAGGTATTGTCAATCCCACCCAGCTAGCTCGGTTGCTAAACCTATGA

mRNA sequence

ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGACTAATGACCTCAGATGGGCCCAGTTCCAGGCCCAATAAGAGGAAAGAGAGAAAGGGCTTTGATGATGAGGCCCACCAACTGTCATTCACAGCTAAAGTATCGAAGCCGACACCGCCTCAATCCAACCACCTCCTAGCCGGCTACTTGGCTCACGAGTTCTTCACCAAAGGCACCCTCTTTGGCCAAGCTTGGGATCATCCGGATGTGTCTATGGCGGCTTCACCACCTGACCTCAACGAGAAACGCCAAGCCGAGCTGCATCCCAAGAATTACCAGTCCTACGTGGAGGTGGCTAATTTGTTGAAACATGGTGGGGCCCACTTTCAAGGTATTGTCAATCCCACCCAGCTAGCTCGGTTGCTAAACCTATGA

Coding sequence (CDS)

ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGACTAATGACCTCAGATGGGCCCAGTTCCAGGCCCAATAAGAGGAAAGAGAGAAAGGGCTTTGATGATGAGGCCCACCAACTGTCATTCACAGCTAAAGTATCGAAGCCGACACCGCCTCAATCCAACCACCTCCTAGCCGGCTACTTGGCTCACGAGTTCTTCACCAAAGGCACCCTCTTTGGCCAAGCTTGGGATCATCCGGATGTGTCTATGGCGGCTTCACCACCTGACCTCAACGAGAAACGCCAAGCCGAGCTGCATCCCAAGAATTACCAGTCCTACGTGGAGGTGGCTAATTTGTTGAAACATGGTGGGGCCCACTTTCAAGGTATTGTCAATCCCACCCAGCTAGCTCGGTTGCTAAACCTATGA

Protein sequence

MNTTKTMRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL
Homology
BLAST of CmoCh17G013350 vs. ExPASy TrEMBL
Match: A0A0A0KDC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088100 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.1e-40
Identity = 105/165 (63.64%), Postives = 112/165 (67.88%), Query Frame = 0

Query: 2   NTTKTMRLPPRRLMTSDGPSSRPNKRKERKGF-----DDEAHQLSFTAKVSKPTP-PQSN 61
           NTTKTMRLPPRRLMTS  P+   NKRKER+G      DDEAHQL  TAKV KPTP P S 
Sbjct: 5   NTTKTMRLPPRRLMTSPRPN---NKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPHSK 64

Query: 62  HLLAGYLAHEFFTKGTLFGQAWDHPD-----------------VSMAASPP---DLNEKR 121
            LLAGYLAHEF TKGTLFGQ WD+PD                  S ++SPP   +  EKR
Sbjct: 65  QLLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTTEPQEKR 124

Query: 122 QAEL---HP-KNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL 137
           QAE    HP KNYQSYVEVANLLKH G H +GIVNPTQLAR LNL
Sbjct: 125 QAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 166

BLAST of CmoCh17G013350 vs. ExPASy TrEMBL
Match: A0A5A7T8V2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001610 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 8.9e-40
Identity = 102/164 (62.20%), Postives = 112/164 (68.29%), Query Frame = 0

Query: 2   NTTKTMRLPPRRLMTSDGP--SSRPNKRKERKGFDDE--------AHQLSFTAKVSKPTP 61
           NTTKTMRLPPRRLMTS  P  ++  NKRKER+G DD+        AHQLSFTAKV  PTP
Sbjct: 5   NTTKTMRLPPRRLMTSPRPNNNNNNNKRKEREGLDDDDHHDDDEAAHQLSFTAKV--PTP 64

Query: 62  PQSNHLLAGYLAHEFFTKGTLFGQAWD-HPDVSMA---------------ASPPDLNEKR 121
           P S  LLAGYLAHEF TKGTLFGQ WD +PD + A                +  +  EKR
Sbjct: 65  PHSKQLLAGYLAHEFLTKGTLFGQTWDNNPDPAAANAIAMPSSSCYYYYSLTTTEAQEKR 124

Query: 122 QAEL---HPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL 137
           QA+    H KNYQSYVEVANLLKH G+H QGIVNPTQLARLLNL
Sbjct: 125 QAQAELHHHKNYQSYVEVANLLKHSGSHLQGIVNPTQLARLLNL 166

BLAST of CmoCh17G013350 vs. ExPASy TrEMBL
Match: A0A1S3CBD7 (uncharacterized protein LOC103498915 OS=Cucumis melo OX=3656 GN=LOC103498915 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.2e-39
Identity = 102/165 (61.82%), Postives = 112/165 (67.88%), Query Frame = 0

Query: 2   NTTKTMRLPPRRLMTSDGP--SSRPNKRKERKGFDDE--------AHQLSFTAKVSKPTP 61
           NTTKTMRLPPRRLMTS  P  ++  NKRKER+G DD+        AHQLSFTAKV  PTP
Sbjct: 5   NTTKTMRLPPRRLMTSPRPNNNNNNNKRKEREGLDDDDHHDDDEAAHQLSFTAKV--PTP 64

Query: 62  PQSNHLLAGYLAHEFFTKGTLFGQAWD-HPDVSMA----------------ASPPDLNEK 121
           P S  LLAGYLAHEF TKGTLFGQ WD +PD + A                 +  +  EK
Sbjct: 65  PHSKQLLAGYLAHEFLTKGTLFGQTWDNNPDPAAANAIAMPSSSSCYYYYSLTTTEAQEK 124

Query: 122 RQAEL---HPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL 137
           RQA+    H KNYQSYVEVANLLKH G+H QGIVNPTQLARLLNL
Sbjct: 125 RQAQAELHHHKNYQSYVEVANLLKHSGSHLQGIVNPTQLARLLNL 167

BLAST of CmoCh17G013350 vs. ExPASy TrEMBL
Match: A0A5B6UNG4 (Embryo sac development arrest protein OS=Gossypium australe OX=47621 GN=EPI10_014052 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 7.3e-26
Identity = 82/151 (54.30%), Postives = 90/151 (59.60%), Query Frame = 0

Query: 4   TKTMRLPPRRLMTSDGPSSRP-NKRKERKGFDDEAHQLSFTAKVSKPTPPQ------SNH 63
           TKTMRLPPRR+     P S P NKRKER GFD     L+     SKPT P       SNH
Sbjct: 3   TKTMRLPPRRV-----PDSMPNNKRKERDGFD--LKPLTSLPPSSKPTMPAAPPPLLSNH 62

Query: 64  LLAGYLAHEFFTKGTLFGQAWD--HPDVSMAASPPDLNEKRQ---------AELHPKNYQ 123
           LLAGYLAHEF T GTLFGQ WD   P  S A S   + EK +         AE  PK +Q
Sbjct: 63  LLAGYLAHEFLTNGTLFGQPWDPTQPQQSPAESRKGIREKAEPNDRSAPGDAEPKPKKHQ 122

Query: 124 SYVEVANLLKHGGAHFQGIVNPTQLARLLNL 137
            YVEVA+LLK  GAH  GIVNPTQL+R L +
Sbjct: 123 RYVEVASLLKTDGAHLPGIVNPTQLSRFLEM 146

BLAST of CmoCh17G013350 vs. ExPASy TrEMBL
Match: A0A0D2N9W4 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G255300 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 9.6e-26
Identity = 81/149 (54.36%), Postives = 91/149 (61.07%), Query Frame = 0

Query: 4   TKTMRLPPRRLMTSDGPSSRP-NKRKERKGFDDEAH-QLSFTAKVSKPTPPQ---SNHLL 63
           TKTMRLPPRR+     P S P NKRKER GFD +    L  ++K   PT P    SNHLL
Sbjct: 3   TKTMRLPPRRV-----PDSMPNNKRKERDGFDLKPQTSLPPSSKPPMPTAPPPLLSNHLL 62

Query: 64  AGYLAHEFFTKGTLFGQAWD--HPDVSMAASPPDLNEKRQ---------AELHPKNYQSY 123
           AGYLAHEF T GTLFGQ WD   P  S A S   + EK +         AE  PK +Q Y
Sbjct: 63  AGYLAHEFLTNGTLFGQPWDPTRPQQSPAESSKGIREKAEPNDRSAAGDAEPKPKKHQRY 122

Query: 124 VEVANLLKHGGAHFQGIVNPTQLARLLNL 137
           VEVA+LLK  GAH  GIVNPTQL+R L +
Sbjct: 123 VEVASLLKTDGAHLPGIVNPTQLSRFLEM 146

BLAST of CmoCh17G013350 vs. NCBI nr
Match: KAG7014604.1 (hypothetical protein SDJN02_24783, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 267.3 bits (682), Expect = 7.2e-68
Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0

Query: 7   MRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEF 66
           MRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEF
Sbjct: 1   MRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEF 60

Query: 67  FTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVN 126
           FTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVN
Sbjct: 61  FTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVN 120

Query: 127 PTQLARLLNL 137
           PTQLAR LNL
Sbjct: 121 PTQLARSLNL 130

BLAST of CmoCh17G013350 vs. NCBI nr
Match: KAG6576089.1 (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255.0 bits (650), Expect = 3.7e-64
Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = 0

Query: 1   MNTTKTMRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAG 60
           MNTTKTMRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAG
Sbjct: 1   MNTTKTMRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAG 60

Query: 61  YLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQSYVEVANLLKHGGAH 120
           YLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQSYVEVANLLKHGGAH
Sbjct: 61  YLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQSYVEVANLLKHGGAH 120

Query: 121 FQGIVN 127
           FQ  ++
Sbjct: 121 FQDCID 126

BLAST of CmoCh17G013350 vs. NCBI nr
Match: XP_038906548.1 (uncharacterized protein LOC120092519 [Benincasa hispida])

HSP 1 Score: 210.7 bits (535), Expect = 8.0e-51
Identity = 112/145 (77.24%), Postives = 117/145 (80.69%), Query Frame = 0

Query: 1   MNTTKTMRLPPRRLMTSDGPSSRPNKRKERKGF-DDEAHQLSFTAKVSKPTPP----QSN 60
           MNTTKTMRLPPRRLMTS  P  RP KRKER+G  DDEAHQLS TAKV KP PP     SN
Sbjct: 1   MNTTKTMRLPPRRLMTSPRPIPRPIKRKEREGLDDDEAHQLSLTAKVPKPPPPPPPSHSN 60

Query: 61  HLLAGYLAHEFFTKGTLFGQAWDHPDVSM----AASPPDLNEKRQAELHPKNYQSYVEVA 120
           HLLAGYLAHEF TKGTLFGQAWD PD +M    A+SP + +EK Q ELHPKNYQSYVEVA
Sbjct: 61  HLLAGYLAHEFLTKGTLFGQAWDKPDPAMASASASSPAEPSEKHQDELHPKNYQSYVEVA 120

Query: 121 NLLKHGGAHFQGIVNPTQLARLLNL 137
           NLLKH G HFQGIVNPTQLARLLNL
Sbjct: 121 NLLKHSGPHFQGIVNPTQLARLLNL 145

BLAST of CmoCh17G013350 vs. NCBI nr
Match: XP_011656778.1 (uncharacterized protein LOC105435768 [Cucumis sativus] >KGN46382.1 hypothetical protein Csa_005722 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 2.2e-40
Identity = 105/165 (63.64%), Postives = 112/165 (67.88%), Query Frame = 0

Query: 2   NTTKTMRLPPRRLMTSDGPSSRPNKRKERKGF-----DDEAHQLSFTAKVSKPTP-PQSN 61
           NTTKTMRLPPRRLMTS  P+   NKRKER+G      DDEAHQL  TAKV KPTP P S 
Sbjct: 5   NTTKTMRLPPRRLMTSPRPN---NKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPHSK 64

Query: 62  HLLAGYLAHEFFTKGTLFGQAWDHPD-----------------VSMAASPP---DLNEKR 121
            LLAGYLAHEF TKGTLFGQ WD+PD                  S ++SPP   +  EKR
Sbjct: 65  QLLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTTEPQEKR 124

Query: 122 QAEL---HP-KNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL 137
           QAE    HP KNYQSYVEVANLLKH G H +GIVNPTQLAR LNL
Sbjct: 125 QAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 166

BLAST of CmoCh17G013350 vs. NCBI nr
Match: KAA0039884.1 (uncharacterized protein E6C27_scaffold122G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 172.9 bits (437), Expect = 1.8e-39
Identity = 102/164 (62.20%), Postives = 112/164 (68.29%), Query Frame = 0

Query: 2   NTTKTMRLPPRRLMTSDGP--SSRPNKRKERKGFDDE--------AHQLSFTAKVSKPTP 61
           NTTKTMRLPPRRLMTS  P  ++  NKRKER+G DD+        AHQLSFTAKV  PTP
Sbjct: 5   NTTKTMRLPPRRLMTSPRPNNNNNNNKRKEREGLDDDDHHDDDEAAHQLSFTAKV--PTP 64

Query: 62  PQSNHLLAGYLAHEFFTKGTLFGQAWD-HPDVSMA---------------ASPPDLNEKR 121
           P S  LLAGYLAHEF TKGTLFGQ WD +PD + A                +  +  EKR
Sbjct: 65  PHSKQLLAGYLAHEFLTKGTLFGQTWDNNPDPAAANAIAMPSSSCYYYYSLTTTEAQEKR 124

Query: 122 QAEL---HPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL 137
           QA+    H KNYQSYVEVANLLKH G+H QGIVNPTQLARLLNL
Sbjct: 125 QAQAELHHHKNYQSYVEVANLLKHSGSHLQGIVNPTQLARLLNL 166

BLAST of CmoCh17G013350 vs. TAIR 10
Match: AT1G04000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44060.1); Has 62 Blast hits to 62 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.5 bits (223), Expect = 1.1e-18
Identity = 63/158 (39.87%), Postives = 78/158 (49.37%), Query Frame = 0

Query: 4   TKTMRLPPRRLMTSDGPSSRPNKRKERKGF-----DDEAHQLSFTAKVSKPTPPQSNH-- 63
           TKTMRLPPRR++T+D       KRKER  F     D+      F +   K  PP  N   
Sbjct: 3   TKTMRLPPRRVLTAD-------KRKERDAFISSVTDNPPEIAKFPSPPPKLVPPPVNPIS 62

Query: 64  ----------------LLAGYLAHEFFTKGTLFGQAWDHPDVSMAAS--PPDLNEKRQAE 123
                           +LAGYL+HE+ T+GTLFG+ W+       +S   P    +   E
Sbjct: 63  KKSSTAAAEPIGSNQLMLAGYLSHEYLTQGTLFGEQWNQARAQAESSKIKPSHTVEPAEE 122

Query: 124 LHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL 137
             PK  + Y EVANLL+  GA   GIVNP QLAR L L
Sbjct: 123 CEPKR-KRYREVANLLRSDGAQLPGIVNPAQLARFLKL 152

BLAST of CmoCh17G013350 vs. TAIR 10
Match: AT5G44060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 3.6e-17
Identity = 59/150 (39.33%), Postives = 73/150 (48.67%), Query Frame = 0

Query: 4   TKTMRLPPRRLMTSD-----------GPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPP 63
           TKTMRLPPRR+ +              P   P K   +K       + + TA V+   P 
Sbjct: 3   TKTMRLPPRRVTSGAVAGKQTESAVINPPPPPTKSIVKK--TPIIPRPTTTATVALAEPV 62

Query: 64  QSNHLLAGYLAHEFFTKGTLFGQAWD------HPDVSMAASPPDLNEKRQAELHPKNYQS 123
            SN LLAGYLAHEF   GTLFG+ W+       P  + +  P         E      + 
Sbjct: 63  CSNQLLAGYLAHEFLNNGTLFGELWNPTKAQAGPLTTQSIDPRKNKPSHDIEPSDHKRRR 122

Query: 124 YVEVANLLKHGGAHFQGIVNPTQLARLLNL 137
           YVEVAN+L+  G H  GIVNP+QLAR L L
Sbjct: 123 YVEVANILRVDGTHLPGIVNPSQLARFLKL 150

BLAST of CmoCh17G013350 vs. TAIR 10
Match: AT3G23440.1 (embryo sac development arrest 6 )

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10
Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 0

Query: 55  NHLLAGYLAHEFFTKGTLFGQ----AWDHPDVSMAASPPDLNEKRQAELHPKNYQSYVEV 114
           N LLAGY+AHE+ T GT+ G+     W      ++ SP    E ++A       QSY EV
Sbjct: 29  NWLLAGYMAHEYLTCGTMLGRKLYSGWAEVGPLVSPSPLQSREVKKAR------QSYSEV 88

Query: 115 ANLLKHGGAHFQGIVNPTQLARLLNL 137
           A++ K  G H  G+VNPTQLA+ + +
Sbjct: 89  ASVFKTDGNHVPGVVNPTQLAKWIQM 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KDC01.1e-4063.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088100 PE=4 SV=1[more]
A0A5A7T8V28.9e-4062.20Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3CBD71.2e-3961.82uncharacterized protein LOC103498915 OS=Cucumis melo OX=3656 GN=LOC103498915 PE=... [more]
A0A5B6UNG47.3e-2654.30Embryo sac development arrest protein OS=Gossypium australe OX=47621 GN=EPI10_01... [more]
A0A0D2N9W49.6e-2654.36Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G255300 PE=4 ... [more]
Match NameE-valueIdentityDescription
KAG7014604.17.2e-6899.23hypothetical protein SDJN02_24783, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6576089.13.7e-6496.83Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial, partial [Cucurb... [more]
XP_038906548.18.0e-5177.24uncharacterized protein LOC120092519 [Benincasa hispida][more]
XP_011656778.12.2e-4063.64uncharacterized protein LOC105435768 [Cucumis sativus] >KGN46382.1 hypothetical ... [more]
KAA0039884.11.8e-3962.20uncharacterized protein E6C27_scaffold122G001610 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT1G04000.11.1e-1839.87unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G44060.13.6e-1739.33unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G23440.11.5e-1040.70embryo sac development arrest 6 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availablePANTHERPTHR34657:SF10F21M11.6 PROTEINcoord: 3..136
NoneNo IPR availablePANTHERPTHR34657EMBRYO SAC DEVELOPMENT ARREST 6coord: 3..136

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G013350.1CmoCh17G013350.1mRNA