CmoCh17G009980 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATGGATGAGGTGGCAGCAGCCGATTCGTTGCAGTTTCCATTTCTCGAGAACCAGAGTTGTCTCAGGTTCATGGAGCTGATCGCTGTTGATCAAGAATTTTCGTCACAATTTGATGTGTTTTCATTGTCATCTTTATCGTCTTCCCTGATTACAAATCCCGTCGAAAATTTGGAGATTGGGAACCAATGGCCAACTACATCGAATTATTCATCGTCGAGCGAGATCGTCAATGATGAGGTGATCGAGCCAAAGCTAGAGAGAGAAGAGAAACAACATTCCCGACAAACCCTAAAAACCGATAAACAGTGAGTGCTTTGTTTTCTATTTTTGTAATTTTCTTTAAGAGGATTTTCAACTCTCCGAGTAATTAATTGAACTTTTACGATCGGGTGGTAAATATAGGATGAAAACAAAGAAAATGACTCGAAAGAAGAAAGATCAAGAACCACGGTTCGCGTTCATGACAAAAAGTGAAGTCGATCATTTGGAAGATGGTTATAGATGGAGAAAGTACGGTCAGAAAGCGGTGAAAAACAACCCTTACCCTAGGTAAATTTCCAACGTGAATTTCTACCGTACGGGGATTTATATACTTTTTCCTAACATTCTTTTTTACTCTCGCGTTTTAGAAGCTATTATCGTTGTACTAGTGTAGCATGCAATGTAAAGAAACGAGTGGAGAGATATTTAAAAGATCCAAGTATTGTCGTCACGACCTACGAAGGCCAACACACTCACCCTAGCCCCAACATGACACGAACAACCTTCTTTCCTCCGCCCATCTCAACCACCCTCTACAACGGCTCTGCAATGTTCACCACCGCCACCACAACCCCGTCTCTCTTCCACTATCAAAATGGTCATAATTCGAACTTTATCAACCACCCAAAGGGCTTCGTGGCATCATCATTTCATCCACCGTGTGACGTTGCACCCTCCAATCATGCTAATCAATTCTTTGCTGCCACGATCAACCATAGATTATTTCAAGATATCGCCCCTTTTCAATACGAGGAATTGACATGGAGAGATTGTTCGATCTCACAAAACCCAACCTAACTAAATGAATCGTGTTTATAGGTAAATTATATATAATATATATAACAAAGTTACTGTATACATATTGACTCCAATGTTTTCTAAATACGTTTTTCTCCGTTTACTTTTAATTGGAGTTTACTAATAAAATCGAGACGTCAATATTGTAAGTGTTATAGACGGGTGTAAAAGCAACATAGAGTCGACAATTGTTGAACATCTTTAATTATGGTCGTCGACATCACATATTTTTCTTTTTTATTTATGCAATATTCAATTTAGAATTTAAAATTTAAAAGAGGCTTTAATTAATCATTAAATTTTTTAATATTTTTATAAAAATAAATTTAAATAGATAAATTTTTAAATTTTATGTTTAATAAATTCAAAAAATTCAAAATTTCTAAACCAAATAAATTTTATAAACTATAGTTTATAATTTAATTCATAAATTTTTTTAAAGCAGTCATAATTTGAATTGGGTCGGGTCGAGATATTTTTTAAACCTAATATAATTCAACCACAAAAATATTTGAGCTGAATTGATTCGAGTTGTCGGAGTCATTTATGTAAATTTTTATTTTTCACCGGAATAAAAAGGTTAATAGTAAAATATTTATTTATTTATTTTCAAACATTAATATATATTTTAAAAAATTATATTTAAAAAAAATTAGTGGAATAATAAATAATGGAAAAAATAATAATTTATGCATTTTCTTCCACCAAAATTGGGCATACACTCAAACCCACATAAAATTTAAAAAATCTCATTGAATAGCCCACTAGAATTTGGGCCACATTTTTTTTTTTTAAATTTCCCTATTTATAATTAATAATTTCTTCCACCAACTTTATAATGTTTTTTTTTTTCATTTAATAAATTATTATTATTTATTAAAAAAAAAGTTTATTTTTTTTTTCATTTAATAAATTAAAATTAATTTTAATTTAGAATGTTTTAGCATTTAAAAAAAAAAAAAAACTAATTCCCTCAAAGAACTGAAAAAAAAAACGAAAAAACAAAATAAAAAACTTTACCGGTTCTGGAAATTTCCAAATGTGGCCGACGATTTCATAATCAACTGGGAATTATCGTTTCCATTGGTTTTTGACCCGTTTGGAGCAAATATAAATATCATCCAAGGATTGACTCAGTCATCCGTCGCCGTCTCCGATCAGGACAAATTCTCACGCTCCAGTTTCATAAAGGTTTACTTTCATAATTTCTCCATGTCCCATTTCATTCAACTATTTTTATTTTTCAATAATGCATTTTTTGATGTCCTGATGATCAGACAAGAACTGTTCCGAAATCGATTTGGATTTTGTCGGTCTGAGCTGAATACCGATTGAATTTGGGTAGGTTTTTACTGATTCCTCGCTATTGGGTTTCTGGATTTTCCGATTCGACTCATTCTAGGTTATTTTCGGACTTGTTTCTTCCAATTTATGTTTATGTTTAATCGGTTTCTTTTTAGTTTTTCATAATTTCTGGGATGATGTTTTTCTCATTTTTAGTGTGTTTTGCTAAATTTGTTTTCGCATTACCAAAGCTGTTCTTGTTTGGCTATATTGGTATCGAAATAGGTGTCGGATTCTTACCAATGCTATGGTAATTGTTGTTTTCTTGCTTATTTTGTAATTTAAGAGACTTATGGGTTAGATTCTTTGGAGGTCCTTTTGATGTTCTTGAGATTGACCTTCTCAGTATGGTTCAGCTATTTCACGGATTTTGAAGTTTTGCATTTGCAATATGTTGGAAATTTCATTGTATTGAAGTGGGAGTGTTCTTCTGTTTCTTCATTGTTATGTTACAGCGAGGGGATTCGCATTAGGATTGAACGTTCATCTTTGATTGCAGAGTTCGAGTGAATTTTGGTTGTTTTAGTTGAAAGGCTATGAGATTGAGTACATGGCTTTAAGAGAAAGGGATCTCGCGTTTGATCTCGAAAGTGGGGGGAGGATCGGTGACGAGGTTGGAAGTGTGGAACCAAGTTCGATCAAACGAGATGTAAAGAACATTTGGAATAGGTTGACAGAGGATACACTGCTAAAAGATGAGCTAGTTGTAGCGTCGAACAGTAATTTTGCTAATTCTGTTGCCGATGTTGTTGCTGATGTGAACGTAGAATTGTTGATAGATAAGAATTTGGAAGGTGAAGACGATTGTGAAGCTTTTGCGCATGTCGAGAAAACTAATGCTAGAGGGAAGCATAAGAATAAGAAAAAGGCTCTGAAGCCACCACGGCCACCAAAAGGTCCTGCTCTTGATGCTGCTGATAGAAGGCTGGTGAAGGAAATTGCAGTAATTGCCATGAAAAAACGTGCAAGAGTCGAGCGAATGAAAGCATTAAGGAAGTCAAAAGCCGAGAAAACATCTTCCTTCAATAGTTGCATTCCTGCCATGATTATCACATTCCTGTTCTTCCTTGTAATCATCCTTCAAGGTTAGCTTATTCGAAGTTCGAGAAGGGTGTTCTTAGTGTCGTGTCCTTCAATCTGGTTATCAGTTTGTGCCTTCTTTTAGCATTATGTTCTTAAGGGAGTTTTATTCGACCGTGTTTACAGGAATAAGTTCCCGAAGCAGTCCGATGCTGCAGGGGTCACCTGAACCTGCTGTTGATGGTAGTAGCGGTTTCATTTCCGTTCAGTACATTAAAAGCTTTCCTCCAAATGAAAGCAATATGGCGAATCCCCCCGATGTTAAGTGCGTATCGTTAGTGAATGGTTATGGTTTATTGAATATAAGTTTCCAAGTATTCCTAGGCTAATTTCGTACCATCTTGTTGATGCAGTTCTGCTGCGTAACTCGTTTCGGGTTTTGTTCCTCTTTAAGGCGAAAAGGGTGGCTGGTTTGAGGATCTTTTTGAAGTTGATAGCCTAGGAGCCAGCTTGCTGGCTCTTATGGCCATGATTTTTGAATAGTTACTTCGATGCGCCGTTGCATCCGACTGATCTGTATATAAATACGAAGAAACATCGAATGTTTCGTTTTTTT ATGAAGATGGATGAGGTGGCAGCAGCCGATTCGTTGCAGTTTCCATTTCTCGAGAACCAGAGTTGTCTCAGGTTCATGGAGCTGATCGCTGTTGATCAAGAATTTTCGTCACAATTTGATGTGTTTTCATTGTCATCTTTATCGTCTTCCCTGATTACAAATCCCGTCGAAAATTTGGAGATTGGGAACCAATGGCCAACTACATCGAATTATTCATCGTCGAGCGAGATCGTCAATGATGAGGTGATCGAGCCAAAGCTAGAGAGAGAAGAGAAACAACATTCCCGACAAACCCTAAAAACCGATAAACAGATGAAAACAAAGAAAATGACTCGAAAGAAGAAAGATCAAGAACCACGGTTCGCGTTCATGACAAAAAGTGAAGTCGATCATTTGGAAGATGGTTATAGATGGAGAAAGTACGGTCAGAAAGCGGTGAAAAACAACCCTTACCCTAGAAGCTATTATCGTTGTACTAGTGTAGCATGCAATTCATCCGTCGCCGTCTCCGATCAGGACAAATTCTCACGCTCCAGTTTCATAAAGACAAGAACTGTTCCGAAATCGATTTGGATTTTGTCGTTGAAAGGCTATGAGATTGAGTACATGGCTTTAAGAGAAAGGGATCTCGCGTTTGATCTCGAAAGTGGGGGGAGGATCGGTGACGAGGTTGGAAGTGTGGAACCAAGTTCGATCAAACGAGATGTAAAGAACATTTGGAATAGGTTGACAGAGGATACACTGCTAAAAGATGAGCTAGTTGTAGCGTCGAACAGTAATTTTGCTAATTCTGTTGCCGATGTTGTTGCTGATGTGAACGTAGAATTGTTGATAGATAAGAATTTGGAAGGTGAAGACGATTGTGAAGCTTTTGCGCATGTCGAGAAAACTAATGCTAGAGGGAAGCATAAGAATAAGAAAAAGGCTCTGAAGCCACCACGGCCACCAAAAGGTCCTGCTCTTGATGCTGCTGATAGAAGGCTGGTGAAGGAAATTGCAGTAATTGCCATGAAAAAACGTGCAAGAGTCGAGCGAATGAAAGCATTAAGGAAGTCAAAAGCCGAGAAAACATCTTCCTTCAATAGTTGCATTCCTGCCATGATTATCACATTCCTGTTCTTCCTTGTAATCATCCTTCAAGGAATAAGTTCCCGAAGCAGTCCGATGCTGCAGGGGTCACCTGAACCTGCTGTTGATGGTAGTAGCGGTTTCATTTCCGTTCAGTACATTAAAAGCTTTCCTCCAAATGAAAGCAATATGGCGAATCCCCCCGATGTTAATTCTGCTGCGTAACTCGTTTCGGGTTTTGTTCCTCTTTAAGGCGAAAAGGGTGGCTGGTTTGAGGATCTTTTTGAAGTTGATAGCCTAGGAGCCAGCTTGCTGGCTCTTATGGCCATGATTTTTGAATAGTTACTTCGATGCGCCGTTGCATCCGACTGATCTGTATATAAATACGAAGAAACATCGAATGTTTCGTTTTTTT ATGAAGATGGATGAGGTGGCAGCAGCCGATTCGTTGCAGTTTCCATTTCTCGAGAACCAGAGTTGTCTCAGGTTCATGGAGCTGATCGCTGTTGATCAAGAATTTTCGTCACAATTTGATGTGTTTTCATTGTCATCTTTATCGTCTTCCCTGATTACAAATCCCGTCGAAAATTTGGAGATTGGGAACCAATGGCCAACTACATCGAATTATTCATCGTCGAGCGAGATCGTCAATGATGAGGTGATCGAGCCAAAGCTAGAGAGAGAAGAGAAACAACATTCCCGACAAACCCTAAAAACCGATAAACAGATGAAAACAAAGAAAATGACTCGAAAGAAGAAAGATCAAGAACCACGGTTCGCGTTCATGACAAAAAGTGAAGTCGATCATTTGGAAGATGGTTATAGATGGAGAAAGTACGGTCAGAAAGCGGTGAAAAACAACCCTTACCCTAGAAGCTATTATCGTTGTACTAGTGTAGCATGCAATTCATCCGTCGCCGTCTCCGATCAGGACAAATTCTCACGCTCCAGTTTCATAAAGACAAGAACTGTTCCGAAATCGATTTGGATTTTGTCGTTGAAAGGCTATGAGATTGAGTACATGGCTTTAAGAGAAAGGGATCTCGCGTTTGATCTCGAAAGTGGGGGGAGGATCGGTGACGAGGTTGGAAGTGTGGAACCAAGTTCGATCAAACGAGATGTAAAGAACATTTGGAATAGGTTGACAGAGGATACACTGCTAAAAGATGAGCTAGTTGTAGCGTCGAACAGTAATTTTGCTAATTCTGTTGCCGATGTTGTTGCTGATGTGAACGTAGAATTGTTGATAGATAAGAATTTGGAAGGTGAAGACGATTGTGAAGCTTTTGCGCATGTCGAGAAAACTAATGCTAGAGGGAAGCATAAGAATAAGAAAAAGGCTCTGAAGCCACCACGGCCACCAAAAGGTCCTGCTCTTGATGCTGCTGATAGAAGGCTGGTGAAGGAAATTGCAGTAATTGCCATGAAAAAACGTGCAAGAGTCGAGCGAATGAAAGCATTAAGGAAGTCAAAAGCCGAGAAAACATCTTCCTTCAATAGTTGCATTCCTGCCATGATTATCACATTCCTGTTCTTCCTTGTAATCATCCTTCAAGGAATAAGTTCCCGAAGCAGTCCGATGCTGCAGGGGTCACCTGAACCTGCTGTTGATGGTAGTAGCGGTTTCATTTCCGTTCAGTACATTAAAAGCTTTCCTCCAAATGAAAGCAATATGGCGAATCCCCCCGATGTTAATTCTGCTGCGTAA MKMDEVAAADSLQFPFLENQSCLRFMELIAVDQEFSSQFDVFSLSSLSSSLITNPVENLEIGNQWPTTSNYSSSSEIVNDEVIEPKLEREEKQHSRQTLKTDKQMKTKKMTRKKKDQEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNNPYPRSYYRCTSVACNSSVAVSDQDKFSRSSFIKTRTVPKSIWILSLKGYEIEYMALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFANSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALDAADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGISSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA Homology
BLAST of CmoCh17G009980 vs. ExPASy Swiss-Prot
Match: Q9FGZ4 (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 6.7e-22 Identity = 76/186 (40.86%), Postives = 106/186 (56.99%), Query Frame = 0
BLAST of CmoCh17G009980 vs. ExPASy Swiss-Prot
Match: O22900 (WRKY transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=WRKY23 PE=2 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 2.0e-21 Identity = 67/127 (52.76%), Postives = 86/127 (67.72%), Query Frame = 0
BLAST of CmoCh17G009980 vs. ExPASy Swiss-Prot
Match: Q8VWJ2 (WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.8e-19 Identity = 59/117 (50.43%), Postives = 75/117 (64.10%), Query Frame = 0
BLAST of CmoCh17G009980 vs. ExPASy Swiss-Prot
Match: Q9FL26 (WRKY transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=WRKY8 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 4.1e-19 Identity = 50/77 (64.94%), Postives = 59/77 (76.62%), Query Frame = 0
BLAST of CmoCh17G009980 vs. ExPASy Swiss-Prot
Match: Q93WV4 (WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 5.0e-17 Identity = 61/138 (44.20%), Postives = 79/138 (57.25%), Query Frame = 0
BLAST of CmoCh17G009980 vs. ExPASy TrEMBL
Match: A0A6J1GR01 (uncharacterized protein LOC111456647 OS=Cucurbita moschata OX=3662 GN=LOC111456647 PE=4 SV=1) HSP 1 Score: 432.6 bits (1111), Expect = 2.0e-117 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CmoCh17G009980 vs. ExPASy TrEMBL
Match: A0A6J1JVV1 (uncharacterized protein LOC111488345 OS=Cucurbita maxima OX=3661 GN=LOC111488345 PE=4 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 1.3e-116 Identity = 226/228 (99.12%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CmoCh17G009980 vs. ExPASy TrEMBL
Match: A0A5A7TZQ1 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold427G00780 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 4.9e-100 Identity = 192/238 (80.67%), Postives = 219/238 (92.02%), Query Frame = 0
BLAST of CmoCh17G009980 vs. ExPASy TrEMBL
Match: A0A5D3D3X4 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001850 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 7.0e-99 Identity = 191/238 (80.25%), Postives = 218/238 (91.60%), Query Frame = 0
BLAST of CmoCh17G009980 vs. ExPASy TrEMBL
Match: A0A1S4DYQ5 (uncharacterized protein LOC103492741 OS=Cucumis melo OX=3656 GN=LOC103492741 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 1.8e-94 Identity = 183/228 (80.26%), Postives = 210/228 (92.11%), Query Frame = 0
BLAST of CmoCh17G009980 vs. NCBI nr
Match: XP_022954398.1 (uncharacterized protein LOC111456647 [Cucurbita moschata] >XP_022954399.1 uncharacterized protein LOC111456647 [Cucurbita moschata] >XP_022954400.1 uncharacterized protein LOC111456647 [Cucurbita moschata] >XP_022954401.1 uncharacterized protein LOC111456647 [Cucurbita moschata]) HSP 1 Score: 432.6 bits (1111), Expect = 4.1e-117 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CmoCh17G009980 vs. NCBI nr
Match: XP_023547469.1 (uncharacterized protein LOC111806405 [Cucurbita pepo subsp. pepo] >XP_023547470.1 uncharacterized protein LOC111806405 [Cucurbita pepo subsp. pepo] >XP_023547471.1 uncharacterized protein LOC111806405 [Cucurbita pepo subsp. pepo] >XP_023547472.1 uncharacterized protein LOC111806405 [Cucurbita pepo subsp. pepo] >KAG6575750.1 hypothetical protein SDJN03_26389, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 431.0 bits (1107), Expect = 1.2e-116 Identity = 227/228 (99.56%), Postives = 227/228 (99.56%), Query Frame = 0
BLAST of CmoCh17G009980 vs. NCBI nr
Match: XP_022991807.1 (uncharacterized protein LOC111488345 [Cucurbita maxima] >XP_022991808.1 uncharacterized protein LOC111488345 [Cucurbita maxima] >XP_022991809.1 uncharacterized protein LOC111488345 [Cucurbita maxima] >XP_022991810.1 uncharacterized protein LOC111488345 [Cucurbita maxima]) HSP 1 Score: 429.9 bits (1104), Expect = 2.6e-116 Identity = 226/228 (99.12%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CmoCh17G009980 vs. NCBI nr
Match: KAG7014301.1 (hypothetical protein SDJN02_24478 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 429.9 bits (1104), Expect = 2.6e-116 Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0
BLAST of CmoCh17G009980 vs. NCBI nr
Match: KAA0046709.1 (putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 374.8 bits (961), Expect = 1.0e-99 Identity = 192/238 (80.67%), Postives = 219/238 (92.02%), Query Frame = 0
BLAST of CmoCh17G009980 vs. TAIR 10
Match: AT5G49520.1 (WRKY DNA-binding protein 48 ) HSP 1 Score: 106.7 bits (265), Expect = 4.8e-23 Identity = 76/186 (40.86%), Postives = 106/186 (56.99%), Query Frame = 0
BLAST of CmoCh17G009980 vs. TAIR 10
Match: AT2G47260.1 (WRKY DNA-binding protein 23 ) HSP 1 Score: 105.1 bits (261), Expect = 1.4e-22 Identity = 67/127 (52.76%), Postives = 86/127 (67.72%), Query Frame = 0
BLAST of CmoCh17G009980 vs. TAIR 10
Match: AT4G01960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits to 67 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 98.6 bits (244), Expect = 1.3e-20 Identity = 74/212 (34.91%), Postives = 109/212 (51.42%), Query Frame = 0
BLAST of CmoCh17G009980 vs. TAIR 10
Match: AT4G18170.1 (WRKY DNA-binding protein 28 ) HSP 1 Score: 98.6 bits (244), Expect = 1.3e-20 Identity = 59/117 (50.43%), Postives = 75/117 (64.10%), Query Frame = 0
BLAST of CmoCh17G009980 vs. TAIR 10
Match: AT5G46350.1 (WRKY DNA-binding protein 8 ) HSP 1 Score: 97.4 bits (241), Expect = 2.9e-20 Identity = 50/77 (64.94%), Postives = 59/77 (76.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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