CmoCh17G005320 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G005320
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein LHY isoform X1
Location	Cmo_Chr17: 5226999 .. 5239328 (+)
RNA-Seq Expression	CmoCh17G005320
Synteny	CmoCh17G005320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCCAACTCCTCAGGAGAAGACTTGGTTTTTAAGGTAATAATCCATTCCCCCTTCTCACAGAAAAGGAAAAGATAATTAAGGAGAAGTTAAGAAAAGGGAAAGAAATGAAAAATGAAAACTGTTTATAATTGAGGTCTACATATGATAGACCAGGAAGCCATATACTATTACAAAGCAACGAGAGCGCTGGACGGAGGAGGAGCACAATCGATTTTTAGAGGCGCTGAAGCTCTATGGGCGAGCATGGCAGAGAATTGAAGGTTATATTTTGCTCAACTGTCAGCATTCCTTTTTGACTTTTGTTGATTTCTTAGTTTGTAACCTTGGTTGGATGAATTATATACTTCCTGATATTTGATGCAAAATTTAATTACCATCCAGGTCATTAATCAGAATTTGCTTCAATTAAAAATTTTATGATCTGTGATACTAATTTATGGTTATTGTTGAGCTAATTTGATCTGGATCCTTTAATATGAATGCTATCGAGTTTATATTGTCCCTCAAAAAGGCTCCTGATTCTCCTTTGTATGCCTTTATATGCAGAGCATATTGGAACCAAAACTGCAGTCCAGATACGAAGTCATGCACAGAAGTTCTTTTCAAAGGTCAATGTGTACCCTTCTCTACTTATTCTTATTTTTTGGTTTTTCTTCTTCTTGGCTTGTTGTCCTTGATTTCAATGCTTTCATTTTTATGAAATATTGTATTATGGCGAACTTGTTTCCTTTTGTGTTTTTTTTTTGGTCCAGTTGTTTGGTTCATAATCTTGCTTGCTCATCAGTAGAACATCTACGTTTCTTTTCATAATCTTGCTTGCACATCAGTAGAATGTCTGAGCATTTCTTACGGGTATTTCCATTTTTTTAGGATAGCAGGTATTTCCATTGGCATTATGGCCTAGTTGCCTTATCCTGTATGCTTGTTATTATATATATTGATTATAGATGTTGCCATATCTGTAGAATGGGTACTAGACTAAAATTAGTTTGACAAGATTGATGCAAAATCCCATCTATGGAAAATCTCATCATGGCTTTCTTTTGGAATATGGGGAAACAAAGAAATAAAAAAGTATTCATGGAAAAGATACTTATACAAATCTCTTTAAAAATGTTATTTACCAAGCTATATCTTAAGGTGAACGGTTTAATATTTTTGCTTCCTATAGTTATGTCATCCTCATTGTAAATTGGAAAAGTCTTTTGTAAACATTATGGATATCCTTTTTGTAAATTTCAAATATAAATGAAATTGTCTCTAATAATAATAATTAAAAAAAAAAAAAAAACATTGATGACACTGATCAAAATGATTTATGTCTCTTTGAGGCTTTGACATATGGCCGTTGAGTTAAAAAACAAAAAAAAGGATGAACAAGAAGACCTTTTCTCCAAAACATGCAAACCTAAAGTTGACGCATGACTTCTCTTTCTCAAGATGATGGCTTCGTCTGACTAAATCCTCTGGCTTGGGATGCTAGAGTTCTGATGTTTTTTTTTCGATTGTTGTGTATTATCAAACGCTTACTGGAAGTTTCAAGTTAACGGTAAATAATGCACAATTTAGGACAACTTTTAGTTGCACAAAGGATGTGCTGACGACAGCATGAGATTAATAATTTCACAAACCGACAATACCTAGGTTCTCAATTTACAATGAGGCCGTGAGGAAAGGATACTGATGTTATCTACAAAATAACAAGATCATCACTTACATGTTTAAACTATTTATGTCTGGAGTTTACTTTCGGACAAAATGAGTTCAACTTGTTATCTAGGAAAAAAAATGTTGGGGGTAAGTAATGTTGTACATCAACAATGTGTAAATTGCAACTCACAAAAGTGAAGAGTTGTTTAAAGATCCAAAAGTATCAACTCTAGATTGCGTTAGGTTTTAGTATCTCATCTTGAAGATATGTGCTTATCTTGGAGGGAGCATCTTGATTTGGCCAAGATTAAAGCTTCTCTTGGATGTTCTTTGTCTTCTTTGTCTGCTAATTATTCTTTTAGCTTTTTCCAATTTGGATTTGTATCCATGAACTTTTTTTTTTCTTTTCATTAAAAATATAGTTTCTTCTTGAAAAAAAATATCCAATGGTACTTGGGTACTTCTTATCAGGATTTTATGAGTGAGTTAAACATATTAAAGTTGATTATCATTTTGTTTGTTCGCATGGGTTCACAAGTTGGTTGTTCTTTGGTTAAGGACTCAAGTTTTATGCACACCAATGTATATATGACTCAAGTGAACGGAATATGATTGAATGTTTTTTTTCAAATCTTTGTTAGCGTATAAATGTTCCAAATTTGTTTTCTATTTGATATAGTTTTGTCTCCTTTTGAACCTGTAGTACACATGGTAAATTCAATAGCCATTTTCAGCGCCACCACATTAGTGATGAAATTGAATATATCTTCCTAACTCATTTATGGCCTTGATCTTGTTGTAACGTTGGGGCTTCCCAACTGTCTCTTGTTTATTCAAATTTATTTCTGTGATCGTAAAGATTTGTTTTGTAGTTTTATTCTTTTGAAAAACAAAGCAAGAAAAGATTTCTTTAAAAAGTTTGGGGCTTGCTATATGCAACTATATTTTTATTAGCAGTTTAAGTAAAGGTTTTTTGTGCATGAAACTTGAGTTCAGCCAATCAAATTTTTAGTCAAATGATTTCCTTTTTATTTTTTAATTATAATCTTTGCATATTCCTATCCAATATATATACGCATAATCTTTACATGTTCCAGGACTTATTTTTGTGAAACTTTCCTGATGTACATGGTAAAGTCTGCTTCCTCATCGCTTTATTCTTATTGTCTTAAATTTTTTCACTTTACCATCTCTAATTCATACCTGGGGAGATAATTGGCAAGTGCTTCAAGTTCTTACAAAATTGGATAAGGGCATCCTCATGACTGTTAAATTGGTAAAGGTATCTACTGATAGTGGCCAACCATCCTTGCTTGATGATCTTTATCAGCTTCTTCTTGCTACCGGATGAGTGGTAAGATTAGGATGATTGCTAGGTCTGCTAAACTGGAATAGCAGATGGCCCCTTAGGCCGATTGGACTAGACCGAAAGCCCGAAACATCCTTGATATCGTGAAGTGACCCTCACGCTTGGAATACTTGACTGAGACCTTAGCTGCCAATGCTGACAGAAAAAAATGCCCATTCCCCTGCTTTTTCAGACTGGTGAAGAGAATTTCTTAGACCGGGGGTTTTAAGATAGAGGTCCTTTAAGGTGAACTTATTCCTTACTAGTTAGAAACACTTTTTCATACTGTCTTTCCAACTGGCTATTCTCGGGCTGGAAAGCTTGAACATGACGAATAGGGCGCGGACGATGTGGCTTAGTGAGATGAAGGGATGGTACGCTGAAATGGTCAGAGACATCTTTATTTGAGGAGGAGGCTTTGTCGTCCGGCTCCCCATAAATGATCTTAGGATGTACTTATGCTCATATCGACCCAAGATTCGATAGATAAACCATCTTGGGGCTATTTTCTATAATAGAAACCTTCATTCAGTGAGAAGGAGAACAATGCTGGTAAGCCTATCCCACATAAAATGGCCAGAGAGTTAACACAGTTGAATGATTCACCTAGGCTGACCTTGCCCTAAGTGTACTGGAGAGTTAACACTGTTTTCTCCCCCCCAACAATGCCTTTTTAGGTAAATCCAATTGCATAGAAAGTGGTCAAGAGTCAGTTGAGTCTGTGATGGCTTGCTTTCAACAGATCATGTGCTATTGATGGGTCTCAAATCCTTAACTTACTGAAACTCACTGTATATGCTTGCCCCTTATTATTTTAAGTTACCTTTATCTTTTTTAATTTTATTTTCCTTCCTCCTTTTGATGGGAGTATCTAGGCTAGCTTATGCACCTTATCTAACTCACGGGGACATGTGCCTAATCCTACAAGATTTGGATGACACATTCATGTTGATACTCATGAATGCCCTTCTCCTATATTGCCATGATTTAACTAGTCTACCCGACTATGGGTTTGCTAATGATTCATCCTCTTTTGTTGAATTTAGGCCGTTTTCTTGGTCTAGGGGTGGCAGGCCAACTAGTATGGTCAATTTATGCCAAGGGTGGAGGAGAGTTGATCACCATGTCCCCTATTGCATTTTTAAGGTAAATCAACTCTACCACCCACTCACATAGAAAATGACAAGGATTCACTCCCTCCCTAGTGACTCCTTCTAGATTCCCCTAGAGAGAGTATTATCCAAAATAGCATTTAAGGTGAAGTACTGATTAAAAAAATACCTGCAAGTGAAGCACCTAGTTCCTCCAGGGACCATTTCATTATGTTTGGCATGCTGAGTTTGCCAAATATTATGAAGAATACTGGAGAAAGTAGCCGTTTCTTAGTTCTTAACACAGAACGATGTCTTCTAAACTTAAGATGGTTCTCTCTGGTACTCAGGCCAACAATTACTAGGGAAAAAAAATGCTTTAGAGCGTGCCATCTAATACAGTCGAGTCAAAATAAAGTTAAATGACTAATTACCTATTCAGATATTTTTTCCAAACACGATCCTTTCTTCGTTGTCTAATCTGAAAAAAAAAAAAAGTCCACCTTTCAGTTTTCTGGTTACATTTGGAAATGTGCTTCCACAGGCTTTTGTTTTTTACAGTTGGTGCCTGCTTGATATTGTTCTCCTCCCTTGCTCAATATTGTGTATGAGACAATATCTATATACGTGCCACAGTGCTTTGATCACATTCATGAATTTTCAACCCAGTTTAGATATTGGTAGTTAGGCTTCAATTGGGATAAACTAGCTGTTAGGTTAGTTGTGATTTGGCTGGCATAAACTAGCCGGTGACTTAGTTAGGATTTGATTGGCATAAACTAGCTGATGTGGGGTTAGTAGGGATATAGTTGGCGTAAACTAGTATAAGTACTAGTGTTCTATCTGCTGACATGTCAGATTTCATTTATAAAGTTTCTCTCGTTTGGTTCACACCAAAATTGGTATCAAAGAAACCTTGTGAAAGGTTTGATGGCTAGAAAAAGAGCATAACACTTTGGAAGTTAAGTAGTCTTGACAGTAGGGTGTCTAAAATAGAATTTCTCCATAATTTGAAAACTATTTTCTCGCCAAGAACGCCAACTCGTCATCTCTTTGGAGAAATTCATAAAAATATGACCAAAGTTCAACTTATGATTGGTACAATGGCCATACAGTGGAATGAACTTCTGAAACCCTTTAATTTGTACAGTCCCCGAGAGCAAACAGAAGGCAACAACATTAACCATTGAAACCAAAAACAGAGAGGTCACTCGCAGAAAATTCTAAGAGTTTTTTTCCACATGATAGGCCCCAATAACGCATAAATGGAAGGGTCTTAATCATCTTCATTTTTTTTTTTTTTCTTTTGTTCATTTGCGTTACTGGCTGAAGTGAGAACAGTTTTAGAGAAGGGTTACTAATTGTGTAGTCTGAAAGACATTGCTGAAAAAAACCTCAAGTTAGTAGCTGTTGATAGCGTTGGAATCCTAGTTTATTTTACTACTATGGAGCTGATTTGCTTGGAAAAGATTAGTTGAATGTGACAGTTGTTGAATGGACGTGCAAGCAAGCATGCCAGGTAATACACTTCATTTGCCCTGTCACAACCAGGATATAAGTTTCTTAAAAAGATTAGCTTGCACCTAGGAAGAACATAATTGGCAACCTGAATTTTGAGAGGGACGTATCTTCAGTCCACCTTATTCCTTCCCAGAGGTAGATTTCCTTATTAACTGAACATGGTTCACCCTTCAGCTAAGGATTGCACTCTGAAGAAACATCAACCACCGCATGTAGATGAAGGAAGGCATACTCTTGTTAATGACCGACCATACACTACCCCATGTATAGAAAACAAAAATTCAAAGGCTCAGTAAGTGAAATGTTGACGGTTGAAATTGTATTCAAGCTTTGTTATCCTAGTGAAAAATTGGTGGGAGTTGGGGATTTGTGTAAACTATCAAGTGCTCAACAACATCAACTACCCCTGATAGGTTCCAATACCAATGGTTGAGGAGTTTTTGGATAAGCTTTATGGGTCTAAAATCTACTCTAAGATAGATCTTAAGTTGGGTTATCATTGGATTTGAGTGATTAAAGAAGGTATACCTAAGATAGTCTTCCAAATGACGAAAGAAGCTATGAATTTCTAGTGATGTTTTTTGTTAAATCACTATTGAACCCAAAAGCCTAAGTTGATGGATTAGCACTCCCTCCTCACTTGTGAGCTTGAAAATTTGTATAAGGCCCAATGGAAATAAATATTAATTAAAAAATAATCGGGGAGGAAATGACATTATAGGTGTTCGCTGATACATTGTTATCACCACTGAACCCAAATGCTTAGGCCGATGGGTTACGTAAATTTAATTATATCAACCTTAACAGATCTCGTGAATGCACTCACAACTATCCTTTTTAGTCCCTTCTTACACAAGTACTTCCTAGTAATCTTTTCTGATATTCTAATTTACAACCTAGATTTATGTCCATATATCACCGACTATAGTTTTTAATCTACAAGGAGAACAATCCTTATGAGAACTTGAAGAATGTGTCGATTGGCAAGAGATCTCATAGAGGATCTTGGTGAGTAGGTGTTAGCACAATAAATGGAGGTAGACCTAGAAAAGGTACGGTTGATGCTGCAATTTCAATGACCACTAATGTGAAAGAGCTTTTGGGATTCTGAAATCTCATGGGATACTATTGACAGTTTGTTTCAAATTATAATACTATTGTCGCTCCTTGCACCCAATTCCTGTAGAAAAACTCCCAGTGGGGTGGTAACTTGCCTATGTTGGCTCTTCTGCACTTCAGCTTGCCTTTCATGATTGAGATTGATGCAATCCAATACCGGATTAGAGATAGTTTTATCATAGGTGTAGCGCATAATCACAATTTCATTCAAAATTTGTTACACTAAGCTCAATTGATGTGTGTTTACAAAAAGGAGCTGATGGCGATAGTCCTTTTAATTCAACAATGGAGAACATACTTACCTGGCCGAAAGTTTATTCCAAGGACTGATCAACAGGCATTGAAGTACCTCCTAGAGTTTAGAGTTCTACAACTAGTCAATAATGCTAGATTTCTGAACTGTTGGGAAATGGCTTCAAGACTCAATATGATTTTGAGTTTGAAAACAATGCCACTTATGCTCGACCATGCCTTGCCCAGCCATTCACTTGGCAAGTTTCTCACCATTCTTGATATTAAAGTGTATAATGGTGAGGTCTTAAATGACCCAAAACTTATTCAGATAACTAACAACCTTAAGAAGATTTGGCCAACATATCTAAATACACGCTAAAAAGGGGACCTTAATCCATAAAGATTGCCTAGTCTTGTTGAAGACATCGACCTTACTTCTACCATGATTCTATATTAGGAGGGAGTAGCATCATACTTACACGAGGCTCACGAGAGTGTTATACTAGATTGATATTCAGACAAATATTAACATGTATGTGAAACATTGTACAATTTGGAAGCCTAACAACACCTTGTGTTGAGGTATTCATATAATTAAATTTACAGTAACCTATCCGCTTAAAGTTTTGTATTCCAGCTCCTTTAAGTTATTTCCTTCCCATTTAATATTGATTTCCACTTGCTGAGGTTTTTACAAATTTCCAAGCCCACGAGTGGAGTGTTAAAATTTTGTTATAGTTAAATTTAGTGTAATCCGTTGGCTTAAGTTCTCGAGTTCAATATTGATTTAACATGTTGGTTGAAAATATTTTGATAATTATTTTATTTTATTGTATTATTTCCTGATTCTATCCCTTCATATTTGAATTTTTCACCTATATTAGAAGAGTACGTATCTGATGATTGAATTATTGGAATACAAGTATTTGATTCCATTAAACCTTAGTCCTTGGCATGTGTGCACCCGGTCTTCTTCAACCACTTCCAATGTTGACTAAAATCTAGGAAGATATTTTGATGGATTTCATGGATGGCCTTTCAAAATCTATGGAAATGATGCCATCTTCACAGTGGCTTATAGGTTGACAAAGTATGCACACTTCAGACCAGTGTGGCAACATTATTTAGTGAAATGATAGTAGCAACATTTGTTTGAGATGTGGTTCAGCTCCTTGGGTCTTTTGCATTCCATTGATTCCAACCATTGCTTACCACCCGCAATTTGATGGGCAAAGAAATTGTGAGCATGTGCTTTTGGAGACATACTTGAGGTTAGGGGTGCATATTGATTTTAGTCTAAACTAGAGTCTAGCCGAGTTTCTCAGTTATTTTGAATTTTGAACCAAACTGAAGTCCATCTACTTGAAAAACCGTTTGGTTTGGGTTTATTAGGCAGTTCATAGTGATTTGGATCTTTTGGTTTAAGCCTCGGTGGTTACCTTTTTTTTTTTTGGAGTTGCAATTTTGGCCCAATTGTCGTCAATTCTCCAGAATAATTCTTACCACAAATTCACATCGCCACTCCTCAATGGAACATGAACACTAGGAAAATTGAGAAGAAAAAGATGAATATAGCTAGTAATGGTACGAGTATCTAAAATCACCGAGTAAGTTTAAGTTAAAGAGAAGAAGAAAATATCAATGATGATAGAACCACCACCACATTTGACTATAGTTATTAGGAGTTATTTAGGAATAGTGAGTTTAAAAACGCATGGAGAGGGTCCAAGGTAGGGAGGGATGGGAGAGGAAAGAAGAGGCATTAGAGGAAAAGAAGAGGTTTTGAGTCGAGGGAGTGTGAAGATCTGGTCATCGATGCCTTGGAGGGAGTGGCTCATGCTTGGGTCTTTCCCAGAGGATTGATGATGGAGCCGAAGCTAGAGACGATGACAAAGACATAGCTAATGCCAGAAATGGAGGCCCAACAAAGATGAGACTGACAGACTCAAGCCAGAGATGGGGAGTGATGACGGTATGAGAGATGAGGGATGGAGTGAGAAGAGATCTGATGTGATGTCAATAAGGGAATGAGATGTAATGGCCTGGAGCATTACGAAACTTGAATTTTCAGCTTTGGCACCGCAAATATTATGATGAAGAATACTTGAAGAATGGAAGTTCTATCTAAGTCACCTGTACATATTTACTTCAAACAGGGTTGCTATCTGTATAGTTCATAGTCCACTTCTTATATGATAGAACAAAACATGTTGCAATTGACAAGCATTTCATAAAATATAGGACCAAGCATAATAGACTGACAACCATTTGATAAAGGAGAAGATTAATGCCTGTGTTATCTGTATCATTTATTTTCTGGCAACGAAGCCAACAAGGATGTGCTTTCAAAGGGGTAGTTTGACAAATTGATATATAAGTTCGCTCAAGCTTGAGTGAGTGTTGGATTTCTTTGTCTGTAAATATTAGTGGTTCACAGTTTTGACAATAATTATGTTATCTTCCATCTTTTTCTTATTTGTAGATGCCATTTCTCGACATTTGACAACATGTTTTATTTGGATAGCTAAAATGAGGTGAACTGTTTTGAAAGTGTATTGAGGTTTTGATAGCTTCATTTTTTGTTTTGTAAATACTTTCTAATAATATAATTTATCTGCCAACTTCAAGGAAAAAGTTTGCACTCTTTACAGTAGAAGACAATTTCGACGGTTAAATTTACAAGGTCCCTTATCCTTGAAAGGACTGTGCATGTAAACTACCATTTTCATGTTCCTTCTGGAGCCTGAACTTCTATATGAACATATCATATCGGGCCACTATCTGTTTCTTAGATTCTTGCGTCCTAGATCATGTACAAAGTTCCTAGTTCAATATAATTTTTCAGCAATTGTTCAACTCCCCACTGCAAGGATGGATATCTTTAAAAATGTTCTCTGCGTGGATATTGTGCGAAGATATGTTTTATTTTCTGAGATTCTGATTTTTTTCTTTAATTTAATTTTCCCAGTTGGAAAAGGAAGCACTCATTAAGGGAATTCCTGTAGGACAAACTCTTGATATAGATATTCCACCACCTCGGCCGAAGAGGAAACCGAGTAATCCTTACCCAAGGAAAACTCCTATATCAAAGTTGGGTGCAAATGACGGGAAGCTCTTGACTTTGGTGTCTTCTTCACAGAGCAAACAAATCTTAGATTTGGAGAAAGAGCCACTGAATGAGGTGTGGTGCACTCTTCTATCTTCTTCCAATGCGTTAATATTTATTGATATTTCACTTTTGCTACTCATACTATTAGGCCACTAGTGGAGAAGAACAAGCAACTAGCGAAATGGATACTCATGACGATAATTGCTCAGAAGTATTTACCCTTTCACGAGAAGCTAACTTCTTTTCTTGGAAAAACAAAAATTCTGTACCTGCGCAAGTTAAACTGAACCTGAACGACTTATGTGCTTTCAGGGAGTTTGTGCCTTCATTTAAAGAGGTAATTGTGCAATGTGAAACAAATGAATCTTATATGTTCTTTTAACTTATATTGAATCGTAATGTCATACTACCTTAGCTTGATGCAAAACAGCCACTCCATGATAAAGGCAGGGGCAAGGTTTCAGAATTTGAGATTGCAAGTGCTTCACAAGAAAAAATTGTGTCTGCTGAAAAGAAAGAAGCTTTAAGCTGCGTACTGTCTGGAGATGAAATGCAAGTTGCTCATAACTATCCAAGGCATGTGCCTGTGCATGTGGTCGATGGAAGCTTGGGAGCAAATGTTCAAGAGTCTGTAACAGACACTCCGCTGCAGGAATCCTCTTTTAATCCAGCAATGGAGGTTCCAGGAGAGCATAACATACATCGGAATCCATCTGATTCTGTTTCCTTCGAACGTCAAAACAATGCACCTAGGTGCATTTATCAATCGTATCCAACTGTTCATCCCTCTCCATTTACCTTACTTCCCCCTAACCAAGAAAATTATAAGTCACTTCTCCATATGTCCTCCTCATTTTCAAATCTCGTTGTGTCTACCCTTCAACAAAACCCTGCAGCCCATGCAATAGCAAGTTTGACAGCAACATGTTGGCCCTATGTGAATCCTGAAGCTTCTGTAGATTCTCCCATGTGTGATAAGGAAAGTTTTAGAACCAAGCAAATGAACTCCACCCCAAGTATGGAAGCCATTGCTACAGCAACTGTAGCAGCTGCAACTGCATGGTGGACGGCCCATGGACTGCTACCTTTATGTGCCCCTTTTCATTCTGCCTTTACCAGTTCTGCTATATCTGCTCCTGTGGCACAACCATCAGATACCTGTCCAAATCCCGAGTCCAAGGACAAAGCAGAAAGTTCCATGCAAATTGATGCAGAACAATCAGAAGCTTTAACTGCTCAACATTCAGGTTCCAAGTCACCTACTCATTCATCATCTGATTCTGAGGGTAGTGGAGGTGCAAATGCAAATGCAAATGCTACGGTGAAACCTGCCCATGACGAGAAGACACCTGCTGAGGATGAGTTTCATGATTCAAACAAGGGAAAGAGGGGAAAACAAGTAGATCGCTCCTCATGTGGTTCCAATACACCATCTGGAAGTGATCAAGAGATAGATGCCACAGAAAATAATGATAAAGAAGAAAAGGAGGAAAAAGAGCTTGAGATGACTTGTCCAGCTTCCGAGTCCAGTAATCGTCGCAGTAGATGCATCAGTAACATAAATGAATCTTGGAAGGAGGTTTCTGATGAGGTAAAAAGGGTATGTTAGTTTATTCAATGTATTTTGTTGCAGTTTTCTTCGTATAATGCTTACATTTTCTCGTAATTTATATCATACAGGGGCGGTTGGCTTTTCAAGCTCTCTTCACTCGTGACATATTGCCTCAAAGCTTTTCACCTTCATATGATGTAGAAAACGAGAATGAGAAGAATGGGAATGTTGAGAAAGATAGTAACATTATAGATAAAGATAGTTGTGCATCCGTTATGGACCTTAACAGCAAGATTTGTGGACCTTCTAGAGATCAAGTTATGGAGAGATACACATCGGCAACAGGTGACAACAATGGAGAGGGAAAAATTCTCACAATTGGACAAGGAAATGGAACCCCCAAGGGTTGTCGAACAGGATTCAAACCTTATAAAAGATGTTCAGTGGAGGCAAAGGAAAAGAGAATGACAACATCCAGCAACCACAGTGAGGAGGGAGATCAAAAAAGACTACGCCTGGAGCAGAAAGCCACAAATTGACAGTTGATTGGCATGCAAACGAGCAAAGGAAACCTTTGTCTGCTGCATGTATATCTAACCTTCCTCGTGAATCTATCTTTCCCACTTTAATTCTTCGCGTGTGTACTATAAAATGCCTACATTATGTGATTGGTACATTCGAACTTATACATCTGAACTGA

mRNA sequence

ATGGAACCCAACTCCTCAGGAGAAGACTTGGTTTTTAAGACCAGGAAGCCATATACTATTACAAAGCAACGAGAGCGCTGGACGGAGGAGGAGCACAATCGATTTTTAGAGGCGCTGAAGCTCTATGGGCGAGCATGGCAGAGAATTGAAGAGCATATTGGAACCAAAACTGCAGTCCAGATACGAAGTCATGCACAGAAGTTCTTTTCAAAGTTGGAAAAGGAAGCACTCATTAAGGGAATTCCTGTAGGACAAACTCTTGATATAGATATTCCACCACCTCGGCCGAAGAGGAAACCGAGTAATCCTTACCCAAGGAAAACTCCTATATCAAAGTTGGGTGCAAATGACGGGAAGCTCTTGACTTTGGTGTCTTCTTCACAGAGCAAACAAATCTTAGATTTGGAGAAAGAGCCACTGAATGAGGCCACTAGTGGAGAAGAACAAGCAACTAGCGAAATGGATACTCATGACGATAATTGCTCAGAAGTATTTACCCTTTCACGAGAAGCTAACTTCTTTTCTTGGAAAAACAAAAATTCTGTACCTGCGCAAGTTAAACTGAACCTGAACGACTTATGTGCTTTCAGGGAGTTTGTGCCTTCATTTAAAGAGCTTGATGCAAAACAGCCACTCCATGATAAAGGCAGGGGCAAGGTTTCAGAATTTGAGATTGCAAGTGCTTCACAAGAAAAAATTGTGTCTGCTGAAAAGAAAGAAGCTTTAAGCTGCGTACTGTCTGGAGATGAAATGCAAGTTGCTCATAACTATCCAAGGCATGTGCCTGTGCATGTGGTCGATGGAAGCTTGGGAGCAAATGTTCAAGAGTCTGTAACAGACACTCCGCTGCAGGAATCCTCTTTTAATCCAGCAATGGAGGTTCCAGGAGAGCATAACATACATCGGAATCCATCTGATTCTGTTTCCTTCGAACGTCAAAACAATGCACCTAGGTGCATTTATCAATCGTATCCAACTGTTCATCCCTCTCCATTTACCTTACTTCCCCCTAACCAAGAAAATTATAAGTCACTTCTCCATATGTCCTCCTCATTTTCAAATCTCGTTGTGTCTACCCTTCAACAAAACCCTGCAGCCCATGCAATAGCAAGTTTGACAGCAACATGTTGGCCCTATGTGAATCCTGAAGCTTCTGTAGATTCTCCCATGTGTGATAAGGAAAGTTTTAGAACCAAGCAAATGAACTCCACCCCAAGTATGGAAGCCATTGCTACAGCAACTGTAGCAGCTGCAACTGCATGGTGGACGGCCCATGGACTGCTACCTTTATGTGCCCCTTTTCATTCTGCCTTTACCAGTTCTGCTATATCTGCTCCTGTGGCACAACCATCAGATACCTGTCCAAATCCCGAGTCCAAGGACAAAGCAGAAAGTTCCATGCAAATTGATGCAGAACAATCAGAAGCTTTAACTGCTCAACATTCAGGTTCCAAGTCACCTACTCATTCATCATCTGATTCTGAGGGTAGTGGAGGTGCAAATGCAAATGCAAATGCTACGGTGAAACCTGCCCATGACGAGAAGACACCTGCTGAGGATGAGTTTCATGATTCAAACAAGGGAAAGAGGGGAAAACAAGTAGATCGCTCCTCATGTGGTTCCAATACACCATCTGGAAGTGATCAAGAGATAGATGCCACAGAAAATAATGATAAAGAAGAAAAGGAGGAAAAAGAGCTTGAGATGACTTGTCCAGCTTCCGAGTCCAGTAATCGTCGCAGTAGATGCATCAGTAACATAAATGAATCTTGGAAGGAGGTTTCTGATGAGGTAAAAAGGGGGCGGTTGGCTTTTCAAGCTCTCTTCACTCGTGACATATTGCCTCAAAGCTTTTCACCTTCATATGATGTAGAAAACGAGAATGAGAAGAATGGGAATGTTGAGAAAGATAGTAACATTATAGATAAAGATAGTTGTGCATCCGTTATGGACCTTAACAGCAAGATTTGTGGACCTTCTAGAGATCAAGTTATGGAGAGATACACATCGGCAACAGGTGACAACAATGGAGAGGGAAAAATTCTCACAATTGGACAAGGAAATGGAACCCCCAAGGGTTGTCGAACAGGATTCAAACCTTATAAAAGATGTTCAGTGGAGGCAAAGGAAAAGAGAATGACAACATCCAGCAACCACATTGATTGGCATGCAAACGAGCAAAGGAAACCTTTGTCTGCTGCATGTATATCTAACCTTCCTCGTGAATCTATCTTTCCCACTTTAATTCTTCGCGTGTGTACTATAAAATGCCTACATTATGTGATTGGTACATTCGAACTTATACATCTGAACTGA

Coding sequence (CDS)

ATGGAACCCAACTCCTCAGGAGAAGACTTGGTTTTTAAGACCAGGAAGCCATATACTATTACAAAGCAACGAGAGCGCTGGACGGAGGAGGAGCACAATCGATTTTTAGAGGCGCTGAAGCTCTATGGGCGAGCATGGCAGAGAATTGAAGAGCATATTGGAACCAAAACTGCAGTCCAGATACGAAGTCATGCACAGAAGTTCTTTTCAAAGTTGGAAAAGGAAGCACTCATTAAGGGAATTCCTGTAGGACAAACTCTTGATATAGATATTCCACCACCTCGGCCGAAGAGGAAACCGAGTAATCCTTACCCAAGGAAAACTCCTATATCAAAGTTGGGTGCAAATGACGGGAAGCTCTTGACTTTGGTGTCTTCTTCACAGAGCAAACAAATCTTAGATTTGGAGAAAGAGCCACTGAATGAGGCCACTAGTGGAGAAGAACAAGCAACTAGCGAAATGGATACTCATGACGATAATTGCTCAGAAGTATTTACCCTTTCACGAGAAGCTAACTTCTTTTCTTGGAAAAACAAAAATTCTGTACCTGCGCAAGTTAAACTGAACCTGAACGACTTATGTGCTTTCAGGGAGTTTGTGCCTTCATTTAAAGAGCTTGATGCAAAACAGCCACTCCATGATAAAGGCAGGGGCAAGGTTTCAGAATTTGAGATTGCAAGTGCTTCACAAGAAAAAATTGTGTCTGCTGAAAAGAAAGAAGCTTTAAGCTGCGTACTGTCTGGAGATGAAATGCAAGTTGCTCATAACTATCCAAGGCATGTGCCTGTGCATGTGGTCGATGGAAGCTTGGGAGCAAATGTTCAAGAGTCTGTAACAGACACTCCGCTGCAGGAATCCTCTTTTAATCCAGCAATGGAGGTTCCAGGAGAGCATAACATACATCGGAATCCATCTGATTCTGTTTCCTTCGAACGTCAAAACAATGCACCTAGGTGCATTTATCAATCGTATCCAACTGTTCATCCCTCTCCATTTACCTTACTTCCCCCTAACCAAGAAAATTATAAGTCACTTCTCCATATGTCCTCCTCATTTTCAAATCTCGTTGTGTCTACCCTTCAACAAAACCCTGCAGCCCATGCAATAGCAAGTTTGACAGCAACATGTTGGCCCTATGTGAATCCTGAAGCTTCTGTAGATTCTCCCATGTGTGATAAGGAAAGTTTTAGAACCAAGCAAATGAACTCCACCCCAAGTATGGAAGCCATTGCTACAGCAACTGTAGCAGCTGCAACTGCATGGTGGACGGCCCATGGACTGCTACCTTTATGTGCCCCTTTTCATTCTGCCTTTACCAGTTCTGCTATATCTGCTCCTGTGGCACAACCATCAGATACCTGTCCAAATCCCGAGTCCAAGGACAAAGCAGAAAGTTCCATGCAAATTGATGCAGAACAATCAGAAGCTTTAACTGCTCAACATTCAGGTTCCAAGTCACCTACTCATTCATCATCTGATTCTGAGGGTAGTGGAGGTGCAAATGCAAATGCAAATGCTACGGTGAAACCTGCCCATGACGAGAAGACACCTGCTGAGGATGAGTTTCATGATTCAAACAAGGGAAAGAGGGGAAAACAAGTAGATCGCTCCTCATGTGGTTCCAATACACCATCTGGAAGTGATCAAGAGATAGATGCCACAGAAAATAATGATAAAGAAGAAAAGGAGGAAAAAGAGCTTGAGATGACTTGTCCAGCTTCCGAGTCCAGTAATCGTCGCAGTAGATGCATCAGTAACATAAATGAATCTTGGAAGGAGGTTTCTGATGAGGTAAAAAGGGGGCGGTTGGCTTTTCAAGCTCTCTTCACTCGTGACATATTGCCTCAAAGCTTTTCACCTTCATATGATGTAGAAAACGAGAATGAGAAGAATGGGAATGTTGAGAAAGATAGTAACATTATAGATAAAGATAGTTGTGCATCCGTTATGGACCTTAACAGCAAGATTTGTGGACCTTCTAGAGATCAAGTTATGGAGAGATACACATCGGCAACAGGTGACAACAATGGAGAGGGAAAAATTCTCACAATTGGACAAGGAAATGGAACCCCCAAGGGTTGTCGAACAGGATTCAAACCTTATAAAAGATGTTCAGTGGAGGCAAAGGAAAAGAGAATGACAACATCCAGCAACCACATTGATTGGCATGCAAACGAGCAAAGGAAACCTTTGTCTGCTGCATGTATATCTAACCTTCCTCGTGAATCTATCTTTCCCACTTTAATTCTTCGCGTGTGTACTATAAAATGCCTACATTATGTGATTGGTACATTCGAACTTATACATCTGAACTGA

Protein sequence

MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKLLTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKEALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNIHRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATAWWTAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQHSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDEVKRGRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDKDSCASVMDLNSKICGPSRDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHIDWHANEQRKPLSAACISNLPRESIFPTLILRVCTIKCLHYVIGTFELIHLN

Homology

[Close]

BLAST of CmoCh17G005320 vs. ExPASy Swiss-Prot
Match: A0A0G3VTN5 (Protein LATE ELONGATED HYPOCOTYL OS=Petunia hybrida OX=4102 GN=LHY PE=2 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 8.0e-151
Identity = 369/769 (47.98%), Postives = 456/769 (59.30%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           M+P SSGE+LV KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDPYSSGEELVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKT----PISKLGAN 120
           IRSHAQKFF+KLEKEALIKG+P+ + LDI+IPPPRPKRKPSNPYPRKT    P S++G  
Sbjct: 61  IRSHAQKFFTKLEKEALIKGVPISEALDIEIPPPRPKRKPSNPYPRKTSIAVPTSQVGTK 120

Query: 121 DGKLLT-LVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHD-DNCSEVFTLSREANFF 180
           DGKL T   S  +++ +LDLEKEP+ E+  G E+ ++  +  +  N S+ FTL +E    
Sbjct: 121 DGKLSTPFPSICENRNLLDLEKEPIIESVGGNEKLSNVQENQNKKNFSQGFTLFKEGASA 180

Query: 181 SWKNKNSVPAQVKLNLNDLCAFREFVPSFKE------------------------LDAKQ 240
           +  +     +Q      D C   E V   K                         LDAKQ
Sbjct: 181 ASVSLGK-SSQTLAEPTDSCTLNESVSVSKGVINHDVANKSFPAVESKGHQQLDILDAKQ 240

Query: 241 PLHDKGRGKVSEFEIASASQEKIVSAEKKEALSC-----VLSGDEMQVAHNYPRHVPVHV 300
                     S    +  S EK    E+K+  S        S ++MQV HNYPRHVPVH+
Sbjct: 241 SFQFDSSCNTSSVGKSCQSNEKWAQGEQKDQPSQPDHFEEFSRNDMQVPHNYPRHVPVHI 300

Query: 301 VDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNIHRNPSDSVSFERQNNAPR-CIYQSY 360
           +DG+LGAN  ++  D    +S  +    + G  +++ NP+ S + E+ +NA R  I+QS+
Sbjct: 301 LDGTLGANGAQTTPDMFYHKSVSHQVGGLQGLSDMYTNPASSATSEQHSNAARSSIHQSF 360

Query: 361 PTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTLQQNPAAHAIASLTATCWPYVNPEA 420
           P  HP    +  P  ++Y+S L +SS+FS+LVVS L QNPAAHA AS  A+ WPY N EA
Sbjct: 361 PCFHPIFTPIRDP--DDYRSFLQLSSTFSSLVVSALLQNPAAHAAASFAASFWPYANMEA 420

Query: 421 SVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATAWWTAHGLLPLCAPFHSAFTSSAIS 480
            VDS   +  S    Q+NS PSM AIA ATVAAATAWW AHGLLPLC+PFHS+ T    S
Sbjct: 421 PVDSTGNNTAS----QINSAPSMAAIAAATVAAATAWWAAHGLLPLCSPFHSSLTCVPTS 480

Query: 481 APVAQPSDTCPNPESKDKAESS--------MQIDAEQSEALTAQHSGSKSPTHSSSDSEG 540
           A   Q  D C   E K +             Q   E SEAL  QHS SK PT  SSDS  
Sbjct: 481 ATSMQ-VDVCQPKEGKSEGREGTHNSPPHVQQPGPECSEALQEQHSASKLPTSPSSDSGE 540

Query: 541 SGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCGSNTPSGSDQEIDATEN 600
           S G N     T      E+  A  E H+ N  K  KQVDRSSCGSNTPS S+ E DA E 
Sbjct: 541 SEGRNLKNGLTA--TDTEQGAAVTETHEPNAEKVRKQVDRSSCGSNTPSSSEVETDALEK 600

Query: 601 NDKEEKEEKELEMTCPASESSNRRSR-CISNINESWKEVSDEVKRGRLAFQALFTRDILP 660
           ++K ++E +E  +   A +++NRR R CISN N+SWKEVS+E   GR+AFQALF+R++LP
Sbjct: 601 DEKGKEEPEEPNVNLLAGDAANRRGRNCISNSNDSWKEVSEE---GRMAFQALFSREVLP 660

Query: 661 QSFSPSYDVENENEKNGNV--EKDSNIIDKDS-CASVMDLN---SKICGPSRDQVMERYT 718
           QSFS S    N  +  GN+  EK     D+     S +DLN   S IC  S   V E   
Sbjct: 661 QSFSRS----NYLKTKGNIDFEKFQQKPDEQGPSGSQLDLNDQASNICS-SHQAVEENVQ 720

[Close]

BLAST of CmoCh17G005320 vs. ExPASy Swiss-Prot
Match: Q6R0H1 (Protein LHY OS=Arabidopsis thaliana OX=3702 GN=LHY PE=1 SV=2)

HSP 1 Score: 406.4 bits (1043), Expect = 7.4e-112
Identity = 302/742 (40.70%), Postives = 393/742 (52.96%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           M+ N+SGE+L+ K RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRK-----TPISKL-G 120
           IRSHAQKFF+KLEKEA +KGIPV Q LDI+IPPPRPKRKP+ PYPRK     T  S++  
Sbjct: 61  IRSHAQKFFTKLEKEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRKPGNNGTSSSQVSS 120

Query: 121 ANDGKLLTLVSSSQSKQ-ILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANF 180
           A D KL++  SSSQ  Q  LDLEK P +E TS      +  +  D+NCS V T+      
Sbjct: 121 AKDAKLVSSASSSQLNQAFLDLEKMPFSEKTS------TGKENQDENCSGVSTV------ 180

Query: 181 FSWKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKI 240
               NK  +P                         KQ   D    K S  + A      +
Sbjct: 181 ----NKYPLP------------------------TKQVSGDIETSKTSTVDNA------V 240

Query: 241 VSAEKKEALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAM- 300
               KK        G  +    NYP H    +V+G++    Q   +    Q+  F+P   
Sbjct: 241 QDVPKKNKDKDGNDGTTVHSMQNYPWHFHADIVNGNIAKCPQNHPSGMVSQDFMFHPMRE 300

Query: 301 EVPGEHNIHRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSF 360
           E  G  N+    + + +           +Q++P  H         +Q++Y+S L +SS+F
Sbjct: 301 ETHGHANLQATTASATT--------TASHQAFPACH---------SQDDYRSFLQISSTF 360

Query: 361 SNLVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIAT 420
           SNL++STL QNPAAHA A+  A+ WPY +   S DS         T   +S PS+ AIA 
Sbjct: 361 SNLIMSTLLQNPAAHAAATFAASVWPYASVGNSGDS--------STPMSSSPPSITAIAA 420

Query: 421 ATVAAATAWWTAHGLLPLCAPFHSA---FTSSAISAPVAQPSDTCPNPESKDKAESSMQI 480
           ATVAAATAWW +HGLLP+CAP       F++ A+  P     DT  N +  +K       
Sbjct: 421 ATVAAATAWWASHGLLPVCAPAPITCVPFSTVAVPTPAMTEMDTVENTQPFEK------- 480

Query: 481 DAEQSEALTAQHSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGK 540
              Q+ AL  Q+  SKSP  SS DS+ +G    NA++       E+       HDSN  +
Sbjct: 481 ---QNTALQDQNLASKSPASSSDDSDETGVTKLNADSKTNDDKIEEVVVTAAVHDSNTAQ 540

Query: 541 RGKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEKELEMTCP-ASESSNRRSRCISN-- 600
           +   VDRSSCGSNTPSGSD E DA +  +K++++ KE +   P   E +NR+ +   N  
Sbjct: 541 KKNLVDRSSCGSNTPSGSDAETDALDKMEKDKEDVKETDENQPDVIELNNRKIKMRDNNS 600

Query: 601 ----INESWKEVSDEVKRGRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKD--SNI 660
                 +SWKEVS+E   GR+AFQALF R+ LPQSFSP    EN N K  +       N 
Sbjct: 601 NNNATTDSWKEVSEE---GRIAFQALFARERLPQSFSPPQVAENVNRKQSDTSMPLAPNF 630

Query: 661 IDKDSCASVMDLNSKICGPSRDQVMERYTSATGDNNGEGKILTIGQGN-GTPKGCRTGFK 720
             +DSCA+                         D  G   ++ IG G   + K  +TGFK
Sbjct: 661 KSQDSCAA-------------------------DQEG---VVMIGVGTCKSLKTRQTGFK 630

Query: 721 PYKRCSVEAKEKRMTTSSNHID 722
           PYKRCS+E KE ++   +N  D
Sbjct: 721 PYKRCSMEVKESQVGNINNQSD 630

[Close]

BLAST of CmoCh17G005320 vs. ExPASy Swiss-Prot
Match: P92973 (Protein CCA1 OS=Arabidopsis thaliana OX=3702 GN=CCA1 PE=1 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.8e-94
Identity = 292/735 (39.73%), Postives = 371/735 (50.48%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           ME NSSGEDLV KTRKPYTITKQRERWTEEEHNRF+EAL+LYGRAWQ+IEEH+ TKTAVQ
Sbjct: 1   METNSSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTP-----ISKLGA 120
           IRSHAQKFFSK+EKEA  KG+ +GQ LDI IPPPRPKRKP+NPYPRKT      +SK G 
Sbjct: 61  IRSHAQKFFSKVEKEAEAKGVAMGQALDIAIPPPRPKRKPNNPYPRKTGSGTILMSKTGV 120

Query: 121 NDGKLLTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFS 180
           NDGK      S  S+++   E    +   S  E+ T +    +DNCS+ FT  +  +  S
Sbjct: 121 NDGK-----ESLGSEKVSHPEMANEDRQQSKPEEKTLQ----EDNCSDCFT-HQYLSAAS 180

Query: 181 WKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVS 240
             NK+ +        ++   FREF+PS +E                       SQ   V 
Sbjct: 181 SMNKSCI------ETSNASTFREFLPSREE----------------------GSQNNRVR 240

Query: 241 AEKKEALSC-VLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEV 300
            E    L+   L     Q    YP H+PV V    LG+++  S++  P +  S       
Sbjct: 241 KESNSDLNAKSLENGNEQGPQTYPMHIPVLV---PLGSSITSSLSHPPSEPDS------- 300

Query: 301 PGEHNIHRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSN 360
               + H    D              YQS+P                            N
Sbjct: 301 ----HPHTVAGD--------------YQSFP----------------------------N 360

Query: 361 LVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATAT 420
            ++STL Q PA +  A+  ++ WP   P++S  SP+           NS P++ A+A AT
Sbjct: 361 HIMSTLLQTPALYTAATFASSFWP---PDSSGGSPV---------PGNSPPNLAAMAAAT 420

Query: 421 VAAATAWWTAHGLLPLCAPFHS-AFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQ 480
           VAAA+AWW A+GLLPLCAP  S  FTS         PS   P+             D E 
Sbjct: 421 VAAASAWWAANGLLPLCAPLSSGGFTSH-------PPSTFGPS------------CDVEY 480

Query: 481 SEALTAQHSG--SKSPTHSSSDSEGSGGANANANATVKPAHDEK---TPAEDEFHDSNKG 540
           ++A T QH    S+   HS +    S   + +     KP   E+   TP  D       G
Sbjct: 481 TKASTLQHGSVQSREQEHSEASKARSSLDSEDVENKSKPVCHEQPSATPESDAKGSDGAG 540

Query: 541 KRGKQVDRSSCGSNTPSGSDQ-EIDATENNDK----EEKEEKELEMTCPASESSNRRSRC 600
            R KQVDRSSCGSNTPS SD  E DA+E  +     E KE  E       SES+ RRSR 
Sbjct: 541 DR-KQVDRSSCGSNTPSSSDDVEADASERQEDGTNGEVKETNEDTNKPQTSESNARRSRI 587

Query: 601 ISNINESWKEVSDEVKRGRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDK 660
            SNI + WK VSDE   GR+AFQALF+R++LPQSF  +Y  E+  E+    E+       
Sbjct: 601 SSNITDPWKSVSDE---GRIAFQALFSREVLPQSF--TYREEHREEEQQQQEQ------- 587

Query: 661 DSCASVMDLN-SKICGPSRDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYK 718
                 +DLN +    P  DQ  +R T   G      K+++ G         RTGFKPYK
Sbjct: 661 -RYPMALDLNFTAQLTPVDDQEEKRNTGFLGIGLDASKLMSRG---------RTGFKPYK 587

[Close]

BLAST of CmoCh17G005320 vs. ExPASy Swiss-Prot
Match: F4J2J6 (Protein REVEILLE 7-like OS=Arabidopsis thaliana OX=3702 GN=RVE7L PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.6e-34
Identity = 72/109 (66.06%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 2   EPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQI 61
           E +S   + V K RKPYT+TKQRE+W+EEEH+RFLEA+KLYGR W++I+EHIGTKTAVQI
Sbjct: 43  ETSSHWIENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQI 102

Query: 62  RSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPI 111
           RSHAQKFFSK+ +EA  +    G    I IPPPRPKRKP++PYPRK+P+
Sbjct: 103 RSHAQKFFSKMAQEADSRS--EGSVKAIVIPPPRPKRKPAHPYPRKSPV 149

[Close]

BLAST of CmoCh17G005320 vs. ExPASy Swiss-Prot
Match: B3H5A8 (Protein REVEILLE 7 OS=Arabidopsis thaliana OX=3702 GN=RVE7 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.6e-34
Identity = 72/109 (66.06%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 2   EPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQI 61
           E +S   + V K RKPYT+TKQRE+W+EEEH+RFLEA+KLYGR W++I+EHIGTKTAVQI
Sbjct: 54  ETSSHWIENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQI 113

Query: 62  RSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPI 111
           RSHAQKFFSK+ +EA  +    G    I IPPPRPKRKP++PYPRK+P+
Sbjct: 114 RSHAQKFFSKMAQEADSRS--EGSVKAIVIPPPRPKRKPAHPYPRKSPV 160

[Close]

BLAST of CmoCh17G005320 vs. ExPASy TrEMBL
Match: A0A6J1ET90 (protein LHY isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436302 PE=4 SV=1)

HSP 1 Score: 1404.4 bits (3634), Expect = 0.0e+00
Identity = 719/719 (100.00%), Postives = 719/719 (100.00%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120
           IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
Sbjct: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120

Query: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180
           LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
Sbjct: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180

Query: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240
           SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE
Sbjct: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240

Query: 241 ALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNI 300
           ALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNI
Sbjct: 241 ALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNI 300

Query: 301 HRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360
           HRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTL
Sbjct: 301 HRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360

Query: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420
           QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
Sbjct: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420

Query: 421 WWTAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480
           WWTAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
Sbjct: 421 WWTAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480

Query: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCG 540
           HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCG
Sbjct: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCG 540

Query: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDEVKR 600
           SNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDEVKR
Sbjct: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDEVKR 600

Query: 601 GRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDKDSCASVMDLNSKICGPS 660
           GRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDKDSCASVMDLNSKICGPS
Sbjct: 601 GRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDKDSCASVMDLNSKICGPS 660

Query: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH 720
           RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH
Sbjct: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH 719

[Close]

BLAST of CmoCh17G005320 vs. ExPASy TrEMBL
Match: A0A6J1EVB9 (protein LHY isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436302 PE=4 SV=1)

HSP 1 Score: 1393.6 bits (3606), Expect = 0.0e+00
Identity = 716/719 (99.58%), Postives = 716/719 (99.58%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120
           IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
Sbjct: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120

Query: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180
           LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
Sbjct: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180

Query: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240
           SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE
Sbjct: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240

Query: 241 ALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNI 300
           ALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNI
Sbjct: 241 ALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNI 300

Query: 301 HRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360
           HRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTL
Sbjct: 301 HRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360

Query: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420
           QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
Sbjct: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420

Query: 421 WWTAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480
           WWTAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
Sbjct: 421 WWTAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480

Query: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCG 540
           HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCG
Sbjct: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCG 540

Query: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDEVKR 600
           SNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDE   
Sbjct: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDE--- 600

Query: 601 GRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDKDSCASVMDLNSKICGPS 660
           GRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDKDSCASVMDLNSKICGPS
Sbjct: 601 GRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDKDSCASVMDLNSKICGPS 660

Query: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH 720
           RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH
Sbjct: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH 716

[Close]

BLAST of CmoCh17G005320 vs. ExPASy TrEMBL
Match: A0A6J1EP66 (protein LHY isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111436302 PE=4 SV=1)

HSP 1 Score: 1389.0 bits (3594), Expect = 0.0e+00
Identity = 714/719 (99.30%), Postives = 714/719 (99.30%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120
           IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
Sbjct: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120

Query: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180
           LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
Sbjct: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180

Query: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240
           SVPAQVKLNLNDLCAFREFVPSFKE     PLHDKGRGKVSEFEIASASQEKIVSAEKKE
Sbjct: 181 SVPAQVKLNLNDLCAFREFVPSFKE-----PLHDKGRGKVSEFEIASASQEKIVSAEKKE 240

Query: 241 ALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNI 300
           ALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNI
Sbjct: 241 ALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNI 300

Query: 301 HRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360
           HRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTL
Sbjct: 301 HRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360

Query: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420
           QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
Sbjct: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420

Query: 421 WWTAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480
           WWTAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
Sbjct: 421 WWTAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480

Query: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCG 540
           HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCG
Sbjct: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCG 540

Query: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDEVKR 600
           SNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDEVKR
Sbjct: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDEVKR 600

Query: 601 GRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDKDSCASVMDLNSKICGPS 660
           GRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDKDSCASVMDLNSKICGPS
Sbjct: 601 GRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDKDSCASVMDLNSKICGPS 660

Query: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH 720
           RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH
Sbjct: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH 714

[Close]

BLAST of CmoCh17G005320 vs. ExPASy TrEMBL
Match: A0A6J1JSR5 (protein LHY isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488569 PE=4 SV=1)

HSP 1 Score: 1383.6 bits (3580), Expect = 0.0e+00
Identity = 708/719 (98.47%), Postives = 713/719 (99.17%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120
           IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
Sbjct: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120

Query: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180
           LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
Sbjct: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180

Query: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240
           SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE
Sbjct: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240

Query: 241 ALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNI 300
           +LSCVLSGDEMQVAHNYPRHVPVHVVDGSLG NVQESVTDTPLQESSFNPAME+PGEHNI
Sbjct: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300

Query: 301 HRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360
           HRNPSDSVS ERQNNAPRCIYQSYPTVHP+PFTLLPPNQENYKSLLHMSSSFSNLVVSTL
Sbjct: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360

Query: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420
           QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
Sbjct: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420

Query: 421 WWTAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480
           WW AHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
Sbjct: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480

Query: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCG 540
           HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAE EFHDSNKGKRGKQVDRSSCG
Sbjct: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540

Query: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDEVKR 600
           SNTPSGSDQEIDATENNDKEEKEEKELEM CPASESSNRRSRCISNINESWKEVSDEVKR
Sbjct: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEVKR 600

Query: 601 GRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDKDSCASVMDLNSKICGPS 660
           GRLAFQALFTRDILPQSFSPSY+VENENEKN NVEKDSNIIDKDSCASVMDL+SKICGPS
Sbjct: 601 GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS 660

Query: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH 720
           RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH
Sbjct: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH 719

[Close]

BLAST of CmoCh17G005320 vs. ExPASy TrEMBL
Match: A0A6J1JSS0 (protein LHY isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488569 PE=4 SV=1)

HSP 1 Score: 1372.8 bits (3552), Expect = 0.0e+00
Identity = 705/719 (98.05%), Postives = 710/719 (98.75%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120
           IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
Sbjct: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120

Query: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180
           LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
Sbjct: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180

Query: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240
           SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE
Sbjct: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240

Query: 241 ALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNI 300
           +LSCVLSGDEMQVAHNYPRHVPVHVVDGSLG NVQESVTDTPLQESSFNPAME+PGEHNI
Sbjct: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300

Query: 301 HRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360
           HRNPSDSVS ERQNNAPRCIYQSYPTVHP+PFTLLPPNQENYKSLLHMSSSFSNLVVSTL
Sbjct: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360

Query: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420
           QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
Sbjct: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420

Query: 421 WWTAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480
           WW AHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
Sbjct: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480

Query: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCG 540
           HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAE EFHDSNKGKRGKQVDRSSCG
Sbjct: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540

Query: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDEVKR 600
           SNTPSGSDQEIDATENNDKEEKEEKELEM CPASESSNRRSRCISNINESWKEVSDE   
Sbjct: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDE--- 600

Query: 601 GRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDKDSCASVMDLNSKICGPS 660
           GRLAFQALFTRDILPQSFSPSY+VENENEKN NVEKDSNIIDKDSCASVMDL+SKICGPS
Sbjct: 601 GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS 660

Query: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH 720
           RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH
Sbjct: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH 716

[Close]

BLAST of CmoCh17G005320 vs. TAIR 10
Match: AT1G01060.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 406.4 bits (1043), Expect = 5.2e-113
Identity = 302/742 (40.70%), Postives = 393/742 (52.96%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           M+ N+SGE+L+ K RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRK-----TPISKL-G 120
           IRSHAQKFF+KLEKEA +KGIPV Q LDI+IPPPRPKRKP+ PYPRK     T  S++  
Sbjct: 61  IRSHAQKFFTKLEKEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRKPGNNGTSSSQVSS 120

Query: 121 ANDGKLLTLVSSSQSKQ-ILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANF 180
           A D KL++  SSSQ  Q  LDLEK P +E TS      +  +  D+NCS V T+      
Sbjct: 121 AKDAKLVSSASSSQLNQAFLDLEKMPFSEKTS------TGKENQDENCSGVSTV------ 180

Query: 181 FSWKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKI 240
               NK  +P                         KQ   D    K S  + A      +
Sbjct: 181 ----NKYPLP------------------------TKQVSGDIETSKTSTVDNA------V 240

Query: 241 VSAEKKEALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAM- 300
               KK        G  +    NYP H    +V+G++    Q   +    Q+  F+P   
Sbjct: 241 QDVPKKNKDKDGNDGTTVHSMQNYPWHFHADIVNGNIAKCPQNHPSGMVSQDFMFHPMRE 300

Query: 301 EVPGEHNIHRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSF 360
           E  G  N+    + + +           +Q++P  H         +Q++Y+S L +SS+F
Sbjct: 301 ETHGHANLQATTASATT--------TASHQAFPACH---------SQDDYRSFLQISSTF 360

Query: 361 SNLVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIAT 420
           SNL++STL QNPAAHA A+  A+ WPY +   S DS         T   +S PS+ AIA 
Sbjct: 361 SNLIMSTLLQNPAAHAAATFAASVWPYASVGNSGDS--------STPMSSSPPSITAIAA 420

Query: 421 ATVAAATAWWTAHGLLPLCAPFHSA---FTSSAISAPVAQPSDTCPNPESKDKAESSMQI 480
           ATVAAATAWW +HGLLP+CAP       F++ A+  P     DT  N +  +K       
Sbjct: 421 ATVAAATAWWASHGLLPVCAPAPITCVPFSTVAVPTPAMTEMDTVENTQPFEK------- 480

Query: 481 DAEQSEALTAQHSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGK 540
              Q+ AL  Q+  SKSP  SS DS+ +G    NA++       E+       HDSN  +
Sbjct: 481 ---QNTALQDQNLASKSPASSSDDSDETGVTKLNADSKTNDDKIEEVVVTAAVHDSNTAQ 540

Query: 541 RGKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEKELEMTCP-ASESSNRRSRCISN-- 600
           +   VDRSSCGSNTPSGSD E DA +  +K++++ KE +   P   E +NR+ +   N  
Sbjct: 541 KKNLVDRSSCGSNTPSGSDAETDALDKMEKDKEDVKETDENQPDVIELNNRKIKMRDNNS 600

Query: 601 ----INESWKEVSDEVKRGRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKD--SNI 660
                 +SWKEVS+E   GR+AFQALF R+ LPQSFSP    EN N K  +       N 
Sbjct: 601 NNNATTDSWKEVSEE---GRIAFQALFARERLPQSFSPPQVAENVNRKQSDTSMPLAPNF 630

Query: 661 IDKDSCASVMDLNSKICGPSRDQVMERYTSATGDNNGEGKILTIGQGN-GTPKGCRTGFK 720
             +DSCA+                         D  G   ++ IG G   + K  +TGFK
Sbjct: 661 KSQDSCAA-------------------------DQEG---VVMIGVGTCKSLKTRQTGFK 630

Query: 721 PYKRCSVEAKEKRMTTSSNHID 722
           PYKRCS+E KE ++   +N  D
Sbjct: 721 PYKRCSMEVKESQVGNINNQSD 630

[Close]

BLAST of CmoCh17G005320 vs. TAIR 10
Match: AT1G01060.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 406.4 bits (1043), Expect = 5.2e-113
Identity = 302/742 (40.70%), Postives = 393/742 (52.96%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           M+ N+SGE+L+ K RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRK-----TPISKL-G 120
           IRSHAQKFF+KLEKEA +KGIPV Q LDI+IPPPRPKRKP+ PYPRK     T  S++  
Sbjct: 61  IRSHAQKFFTKLEKEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRKPGNNGTSSSQVSS 120

Query: 121 ANDGKLLTLVSSSQSKQ-ILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANF 180
           A D KL++  SSSQ  Q  LDLEK P +E TS      +  +  D+NCS V T+      
Sbjct: 121 AKDAKLVSSASSSQLNQAFLDLEKMPFSEKTS------TGKENQDENCSGVSTV------ 180

Query: 181 FSWKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKI 240
               NK  +P                         KQ   D    K S  + A      +
Sbjct: 181 ----NKYPLP------------------------TKQVSGDIETSKTSTVDNA------V 240

Query: 241 VSAEKKEALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAM- 300
               KK        G  +    NYP H    +V+G++    Q   +    Q+  F+P   
Sbjct: 241 QDVPKKNKDKDGNDGTTVHSMQNYPWHFHADIVNGNIAKCPQNHPSGMVSQDFMFHPMRE 300

Query: 301 EVPGEHNIHRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSF 360
           E  G  N+    + + +           +Q++P  H         +Q++Y+S L +SS+F
Sbjct: 301 ETHGHANLQATTASATT--------TASHQAFPACH---------SQDDYRSFLQISSTF 360

Query: 361 SNLVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIAT 420
           SNL++STL QNPAAHA A+  A+ WPY +   S DS         T   +S PS+ AIA 
Sbjct: 361 SNLIMSTLLQNPAAHAAATFAASVWPYASVGNSGDS--------STPMSSSPPSITAIAA 420

Query: 421 ATVAAATAWWTAHGLLPLCAPFHSA---FTSSAISAPVAQPSDTCPNPESKDKAESSMQI 480
           ATVAAATAWW +HGLLP+CAP       F++ A+  P     DT  N +  +K       
Sbjct: 421 ATVAAATAWWASHGLLPVCAPAPITCVPFSTVAVPTPAMTEMDTVENTQPFEK------- 480

Query: 481 DAEQSEALTAQHSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGK 540
              Q+ AL  Q+  SKSP  SS DS+ +G    NA++       E+       HDSN  +
Sbjct: 481 ---QNTALQDQNLASKSPASSSDDSDETGVTKLNADSKTNDDKIEEVVVTAAVHDSNTAQ 540

Query: 541 RGKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEKELEMTCP-ASESSNRRSRCISN-- 600
           +   VDRSSCGSNTPSGSD E DA +  +K++++ KE +   P   E +NR+ +   N  
Sbjct: 541 KKNLVDRSSCGSNTPSGSDAETDALDKMEKDKEDVKETDENQPDVIELNNRKIKMRDNNS 600

Query: 601 ----INESWKEVSDEVKRGRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKD--SNI 660
                 +SWKEVS+E   GR+AFQALF R+ LPQSFSP    EN N K  +       N 
Sbjct: 601 NNNATTDSWKEVSEE---GRIAFQALFARERLPQSFSPPQVAENVNRKQSDTSMPLAPNF 630

Query: 661 IDKDSCASVMDLNSKICGPSRDQVMERYTSATGDNNGEGKILTIGQGN-GTPKGCRTGFK 720
             +DSCA+                         D  G   ++ IG G   + K  +TGFK
Sbjct: 661 KSQDSCAA-------------------------DQEG---VVMIGVGTCKSLKTRQTGFK 630

Query: 721 PYKRCSVEAKEKRMTTSSNHID 722
           PYKRCS+E KE ++   +N  D
Sbjct: 721 PYKRCSMEVKESQVGNINNQSD 630

[Close]

BLAST of CmoCh17G005320 vs. TAIR 10
Match: AT1G01060.3 (Homeodomain-like superfamily protein )

HSP 1 Score: 406.4 bits (1043), Expect = 5.2e-113
Identity = 302/742 (40.70%), Postives = 393/742 (52.96%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           M+ N+SGE+L+ K RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRK-----TPISKL-G 120
           IRSHAQKFF+KLEKEA +KGIPV Q LDI+IPPPRPKRKP+ PYPRK     T  S++  
Sbjct: 61  IRSHAQKFFTKLEKEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRKPGNNGTSSSQVSS 120

Query: 121 ANDGKLLTLVSSSQSKQ-ILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANF 180
           A D KL++  SSSQ  Q  LDLEK P +E TS      +  +  D+NCS V T+      
Sbjct: 121 AKDAKLVSSASSSQLNQAFLDLEKMPFSEKTS------TGKENQDENCSGVSTV------ 180

Query: 181 FSWKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKI 240
               NK  +P                         KQ   D    K S  + A      +
Sbjct: 181 ----NKYPLP------------------------TKQVSGDIETSKTSTVDNA------V 240

Query: 241 VSAEKKEALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAM- 300
               KK        G  +    NYP H    +V+G++    Q   +    Q+  F+P   
Sbjct: 241 QDVPKKNKDKDGNDGTTVHSMQNYPWHFHADIVNGNIAKCPQNHPSGMVSQDFMFHPMRE 300

Query: 301 EVPGEHNIHRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSF 360
           E  G  N+    + + +           +Q++P  H         +Q++Y+S L +SS+F
Sbjct: 301 ETHGHANLQATTASATT--------TASHQAFPACH---------SQDDYRSFLQISSTF 360

Query: 361 SNLVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIAT 420
           SNL++STL QNPAAHA A+  A+ WPY +   S DS         T   +S PS+ AIA 
Sbjct: 361 SNLIMSTLLQNPAAHAAATFAASVWPYASVGNSGDS--------STPMSSSPPSITAIAA 420

Query: 421 ATVAAATAWWTAHGLLPLCAPFHSA---FTSSAISAPVAQPSDTCPNPESKDKAESSMQI 480
           ATVAAATAWW +HGLLP+CAP       F++ A+  P     DT  N +  +K       
Sbjct: 421 ATVAAATAWWASHGLLPVCAPAPITCVPFSTVAVPTPAMTEMDTVENTQPFEK------- 480

Query: 481 DAEQSEALTAQHSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGK 540
              Q+ AL  Q+  SKSP  SS DS+ +G    NA++       E+       HDSN  +
Sbjct: 481 ---QNTALQDQNLASKSPASSSDDSDETGVTKLNADSKTNDDKIEEVVVTAAVHDSNTAQ 540

Query: 541 RGKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEKELEMTCP-ASESSNRRSRCISN-- 600
           +   VDRSSCGSNTPSGSD E DA +  +K++++ KE +   P   E +NR+ +   N  
Sbjct: 541 KKNLVDRSSCGSNTPSGSDAETDALDKMEKDKEDVKETDENQPDVIELNNRKIKMRDNNS 600

Query: 601 ----INESWKEVSDEVKRGRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKD--SNI 660
                 +SWKEVS+E   GR+AFQALF R+ LPQSFSP    EN N K  +       N 
Sbjct: 601 NNNATTDSWKEVSEE---GRIAFQALFARERLPQSFSPPQVAENVNRKQSDTSMPLAPNF 630

Query: 661 IDKDSCASVMDLNSKICGPSRDQVMERYTSATGDNNGEGKILTIGQGN-GTPKGCRTGFK 720
             +DSCA+                         D  G   ++ IG G   + K  +TGFK
Sbjct: 661 KSQDSCAA-------------------------DQEG---VVMIGVGTCKSLKTRQTGFK 630

Query: 721 PYKRCSVEAKEKRMTTSSNHID 722
           PYKRCS+E KE ++   +N  D
Sbjct: 721 PYKRCSMEVKESQVGNINNQSD 630

[Close]

BLAST of CmoCh17G005320 vs. TAIR 10
Match: AT1G01060.4 (Homeodomain-like superfamily protein )

HSP 1 Score: 406.4 bits (1043), Expect = 5.2e-113
Identity = 300/742 (40.43%), Postives = 391/742 (52.70%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           M+ N+SGE+L+ K RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRK-----TPISKL-G 120
           IRSHAQKFF+KLEKEA +KGIPV Q LDI+IPPPRPKRKP+ PYPRK     T  S++  
Sbjct: 61  IRSHAQKFFTKLEKEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRKPGNNGTSSSQVSS 120

Query: 121 ANDGKLLTLVSSSQSKQ-ILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANF 180
           A D KL++  SSSQ  Q  LDLEK P +E TS      +  +  D+NCS V T++     
Sbjct: 121 AKDAKLVSSASSSQLNQAFLDLEKMPFSEKTS------TGKENQDENCSGVSTVN----- 180

Query: 181 FSWKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKI 240
                                              K PL  K  G + E    S     +
Sbjct: 181 -----------------------------------KYPLPTKVSGDI-ETSKTSTVDNAV 240

Query: 241 VSAEKKEALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAM- 300
               KK        G  +    NYP H    +V+G++    Q   +    Q+  F+P   
Sbjct: 241 QDVPKKNKDKDGNDGTTVHSMQNYPWHFHADIVNGNIAKCPQNHPSGMVSQDFMFHPMRE 300

Query: 301 EVPGEHNIHRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSF 360
           E  G  N+    + + +           +Q++P  H         +Q++Y+S L +SS+F
Sbjct: 301 ETHGHANLQATTASATT--------TASHQAFPACH---------SQDDYRSFLQISSTF 360

Query: 361 SNLVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIAT 420
           SNL++STL QNPAAHA A+  A+ WPY +   S DS         T   +S PS+ AIA 
Sbjct: 361 SNLIMSTLLQNPAAHAAATFAASVWPYASVGNSGDS--------STPMSSSPPSITAIAA 420

Query: 421 ATVAAATAWWTAHGLLPLCAPFHSA---FTSSAISAPVAQPSDTCPNPESKDKAESSMQI 480
           ATVAAATAWW +HGLLP+CAP       F++ A+  P     DT  N +  +K       
Sbjct: 421 ATVAAATAWWASHGLLPVCAPAPITCVPFSTVAVPTPAMTEMDTVENTQPFEK------- 480

Query: 481 DAEQSEALTAQHSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGK 540
              Q+ AL  Q+  SKSP  SS DS+ +G    NA++       E+       HDSN  +
Sbjct: 481 ---QNTALQDQNLASKSPASSSDDSDETGVTKLNADSKTNDDKIEEVVVTAAVHDSNTAQ 540

Query: 541 RGKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEKELEMTCP-ASESSNRRSRCISN-- 600
           +   VDRSSCGSNTPSGSD E DA +  +K++++ KE +   P   E +NR+ +   N  
Sbjct: 541 KKNLVDRSSCGSNTPSGSDAETDALDKMEKDKEDVKETDENQPDVIELNNRKIKMRDNNS 600

Query: 601 ----INESWKEVSDEVKRGRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKD--SNI 660
                 +SWKEVS+E   GR+AFQALF R+ LPQSFSP    EN N K  +       N 
Sbjct: 601 NNNATTDSWKEVSEE---GRIAFQALFARERLPQSFSPPQVAENVNRKQSDTSMPLAPNF 629

Query: 661 IDKDSCASVMDLNSKICGPSRDQVMERYTSATGDNNGEGKILTIGQGN-GTPKGCRTGFK 720
             +DSCA+                         D  G   ++ IG G   + K  +TGFK
Sbjct: 661 KSQDSCAA-------------------------DQEG---VVMIGVGTCKSLKTRQTGFK 629

Query: 721 PYKRCSVEAKEKRMTTSSNHID 722
           PYKRCS+E KE ++   +N  D
Sbjct: 721 PYKRCSMEVKESQVGNINNQSD 629

[Close]

BLAST of CmoCh17G005320 vs. TAIR 10
Match: AT2G46830.1 (circadian clock associated 1 )

HSP 1 Score: 348.6 bits (893), Expect = 1.3e-95
Identity = 292/735 (39.73%), Postives = 371/735 (50.48%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           ME NSSGEDLV KTRKPYTITKQRERWTEEEHNRF+EAL+LYGRAWQ+IEEH+ TKTAVQ
Sbjct: 1   METNSSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTP-----ISKLGA 120
           IRSHAQKFFSK+EKEA  KG+ +GQ LDI IPPPRPKRKP+NPYPRKT      +SK G 
Sbjct: 61  IRSHAQKFFSKVEKEAEAKGVAMGQALDIAIPPPRPKRKPNNPYPRKTGSGTILMSKTGV 120

Query: 121 NDGKLLTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFS 180
           NDGK      S  S+++   E    +   S  E+ T +    +DNCS+ FT  +  +  S
Sbjct: 121 NDGK-----ESLGSEKVSHPEMANEDRQQSKPEEKTLQ----EDNCSDCFT-HQYLSAAS 180

Query: 181 WKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVS 240
             NK+ +        ++   FREF+PS +E                       SQ   V 
Sbjct: 181 SMNKSCI------ETSNASTFREFLPSREE----------------------GSQNNRVR 240

Query: 241 AEKKEALSC-VLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEV 300
            E    L+   L     Q    YP H+PV V    LG+++  S++  P +  S       
Sbjct: 241 KESNSDLNAKSLENGNEQGPQTYPMHIPVLV---PLGSSITSSLSHPPSEPDS------- 300

Query: 301 PGEHNIHRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSN 360
               + H    D              YQS+P                            N
Sbjct: 301 ----HPHTVAGD--------------YQSFP----------------------------N 360

Query: 361 LVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATAT 420
            ++STL Q PA +  A+  ++ WP   P++S  SP+           NS P++ A+A AT
Sbjct: 361 HIMSTLLQTPALYTAATFASSFWP---PDSSGGSPV---------PGNSPPNLAAMAAAT 420

Query: 421 VAAATAWWTAHGLLPLCAPFHS-AFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQ 480
           VAAA+AWW A+GLLPLCAP  S  FTS         PS   P+             D E 
Sbjct: 421 VAAASAWWAANGLLPLCAPLSSGGFTSH-------PPSTFGPS------------CDVEY 480

Query: 481 SEALTAQHSG--SKSPTHSSSDSEGSGGANANANATVKPAHDEK---TPAEDEFHDSNKG 540
           ++A T QH    S+   HS +    S   + +     KP   E+   TP  D       G
Sbjct: 481 TKASTLQHGSVQSREQEHSEASKARSSLDSEDVENKSKPVCHEQPSATPESDAKGSDGAG 540

Query: 541 KRGKQVDRSSCGSNTPSGSDQ-EIDATENNDK----EEKEEKELEMTCPASESSNRRSRC 600
            R KQVDRSSCGSNTPS SD  E DA+E  +     E KE  E       SES+ RRSR 
Sbjct: 541 DR-KQVDRSSCGSNTPSSSDDVEADASERQEDGTNGEVKETNEDTNKPQTSESNARRSRI 587

Query: 601 ISNINESWKEVSDEVKRGRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDK 660
            SNI + WK VSDE   GR+AFQALF+R++LPQSF  +Y  E+  E+    E+       
Sbjct: 601 SSNITDPWKSVSDE---GRIAFQALFSREVLPQSF--TYREEHREEEQQQQEQ------- 587

Query: 661 DSCASVMDLN-SKICGPSRDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYK 718
                 +DLN +    P  DQ  +R T   G      K+++ G         RTGFKPYK
Sbjct: 661 -RYPMALDLNFTAQLTPVDDQEEKRNTGFLGIGLDASKLMSRG---------RTGFKPYK 587

The following BLAST results are available for this feature:

BLAST of CmoCh17G005320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A0G3VTN5	8.0e-151	47.98	Protein LATE ELONGATED HYPOCOTYL OS=Petunia hybrida OX=4102 GN=LHY PE=2 SV=1	[more]
Q6R0H1	7.4e-112	40.70	Protein LHY OS=Arabidopsis thaliana OX=3702 GN=LHY PE=1 SV=2	[more]
P92973	1.8e-94	39.73	Protein CCA1 OS=Arabidopsis thaliana OX=3702 GN=CCA1 PE=1 SV=1	[more]
F4J2J6	3.6e-34	66.06	Protein REVEILLE 7-like OS=Arabidopsis thaliana OX=3702 GN=RVE7L PE=3 SV=1	[more]
B3H5A8	3.6e-34	66.06	Protein REVEILLE 7 OS=Arabidopsis thaliana OX=3702 GN=RVE7 PE=2 SV=1	[more]

BLAST of CmoCh17G005320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ET90	0.0e+00	100.00	protein LHY isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436302 PE=4 SV=1	[more]
A0A6J1EVB9	0.0e+00	99.58	protein LHY isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436302 PE=4 SV=1	[more]
A0A6J1EP66	0.0e+00	99.30	protein LHY isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111436302 PE=4 SV=1	[more]
A0A6J1JSR5	0.0e+00	98.47	protein LHY isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488569 PE=4 SV=1	[more]
A0A6J1JSS0	0.0e+00	98.05	protein LHY isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488569 PE=4 SV=1	[more]

BLAST of CmoCh17G005320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01060.1	5.2e-113	40.70	Homeodomain-like superfamily protein	[more]
AT1G01060.2	5.2e-113	40.70	Homeodomain-like superfamily protein	[more]
AT1G01060.3	5.2e-113	40.70	Homeodomain-like superfamily protein	[more]
AT1G01060.4	5.2e-113	40.43	Homeodomain-like superfamily protein	[more]
AT2G46830.1	1.3e-95	39.73	circadian clock associated 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 23..71 e-value: 7.3E-13 score: 58.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 19..69 score: 7.166258
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 26..69 e-value: 3.30866E-10 score: 53.7334
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 24..67 e-value: 2.7E-13 score: 49.9
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 19..73 score: 21.091417
None	No IPR available	GENE3D	1.10.10.60		coord: 26..73 e-value: 8.5E-18 score: 66.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 446..581
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 552..570
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 469..504
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 512..534
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 535..551
None	No IPR available	PANTHER	PTHR12802:SF109	PROTEIN LHY	coord: 2..718
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 2..718
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 22..71 e-value: 8.5E-17 score: 59.2
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 22..73 score: 11.205126
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 18..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G005320.1	CmoCh17G005320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding