CmoCh17G004300 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G004300
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Nuclear transport factor 2 family protein
Location	Cmo_Chr17: 2861895 .. 2868031 (-)
RNA-Seq Expression	CmoCh17G004300
Synteny	CmoCh17G004300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTTTCCCGCAAGAAACTTGGGAAGAAGATATTTTCACCTCTCATGGCTGCCATTCGTTTTCGCGCGGCAAAGCTCCAAAGCATTCTGATTCAATCAACTACCAAACCATCCATGTTTGTAAATTGCAATGGCGACGATCTTCCCTTTTCAATCACGTACGTCTCTTCAAACATCTCTCAACGCCATTCGACCTAATCGCCCTCTCAAAATCTGCAAAATCCGATGTCAAGGGGAAAATCCCGCTACCGGTTCGCCGAAGAATCGAGAATCTAAGCCCGAGAATGCGGTGTTGAAGGTCGCTTGGTATGGCTCCGAGCTCTTGGGGATCGCCGCTTCATTTCTCCGTCCGCCGACGGATGTTGAAACGCCTGTTAGGGCGCAGGAGCTTGCGAGAGATGTGTCCGGTGCAATTCGTCGCCCTGTGATTGTGGAAACGATTAAGAAGGATTTTGAGCGGTCGTACTTCGTCACAGGTTTGGGAAATTTTTGTTTATGCGAGAGATTACTATTGTGCGTTGGTTTTGTCTCTGGATGTTTGGAAGTTCTAGAGTTCTAGGGTTCTTTTGAAATCAAGATAGTTTGTTTTGTTCAATTCAAGTTGTTCTTGAAACCATAAGCAGTAAGTTGAAACTAAATCTAAACCATAAATACTCAAATTATCGGAATTATATTGAAACTTTTTAAGATCATAGAGATTAAATTCAAATTTTATCCAAACCATGGAAGCTAAATTTGTAATTTAGCATAAGTAATGATTTTCATCCTCAATATTGTTGTCCTTAACTGTGTAATAGATGAACATATGTATATTACACTGCTAACGTGGGTATATAAGGAACAATGAAGTAGGTGAATTATAGAGTAGGTTGATATTAGATGACATTATAAAAGTTTTGAATACGACAAGAAACTACTAGGCACAAAATCGAAAGTTTAGGGATTGAATAAACATTTTTTTTAATTTAGGAACTTGTTAGACACAATATTAAGAGTTCGGGGTTTGTTAACATTTTTGTAAATTTAAAGATTTTTAGACACAAGCGACTAAATTTGTAATTCAACTTCAAAAGTTGATCGACTAAAAGTGACCTCTTCAAAGTAAAAGAATGAGTATCCCGTGAGGGGCAGACTCGTTGGCAAGGGCTTAGTTTCTCTTGGATATACTAGTTTAGAGGTCCCAAGTCCGATCCTTCGGGTGAGCTTAATACCAAAAACCCTCAATGTCTCACGGGTTCGAGCCTTGGGGAGGGTGCAGGTGCCCCCAAGTATAGGGATAAAAGCTCCGACTCCCAATCAAATAAAAGTAAGTTGAAGAACATTACATTAAAAAATACTTATTCAATGAATAAAAAAGTTAGAAAAGATTGCATAAAGAATCTAATTAGCAAAACAATGAAGTGAATGTGTTCATTTATATTAACTTTGGCTGACTCATTGTAGAACTTGTGAGCAGTTTTTCCAAGTTTTGTTCATTTGTATTTGGTGATGATCAGGGAACCTTACTGTTGAAGCTTATGAAGAGCAGTGCGAATTTGCTGATCCGGCTGGTTCTTTCAAAGGTCTTAGCCGATTTAAAAGAAACTGTACAAATTTTGGATCCCTTGTTGATAAGTCAAACATGAAGCTTACCAAATGGGAGGATTTTGAGGTGAGCTCAGTCTATAGAGATTACTGTTTTTTGTTTACTAAGCTTAGTGTTGAATTGTTGGTTGATTGGATTGAGTACAGGACAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCATTTCCTTGGAGACCAATTCTATCTGGTATGTTTAATTTATGATGCTTCAGAGCTAGTTTGAGATAATTTCTTGGAATGGTGTTATTTCAGTGAAGTACTTCTGGAATGAGCACTAATTAAGTTTTTTCTCTGAGAACATTCTCTGCTTTGAAATGGTAATAAAAAGTAATTTTAACCGAAATCCCACGTCGGTTAGAGAGGAGAACAAAACATTTTTTATAAGAGTGTGGAAACCTCTCTTTAGCATATGCGTTTTAAAAACCTTGAGGAGAATACCGGCCGGTGTGCCAACAAGGACGTTGGGTCCAGAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTTTTTATAAGGGTGTGGAAATCTTTCTCTAGCAGACGCGTTTTAAAAACCTTGAGTGAAAGCCCAAAAGGGAAAGCACAAAAAGGACAATATCTGCTAGCGGTGGGTTTGGGCCATTACAAATATTGGGGGTCCCACGTCGATTTGAGAAGGGAATGAGTGCCACCGAGGATGCTGGGCCCTGAAGGGGGGTGGATAGTGAGATCTCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCATTTTAAAAGCCTTGAGGGGAAAGCCCGAAAGGGAAACCCAAAGAGGACAATATCTGCTAGCAATGGGTTTTGATCGTTACAAATATTGGAGGGTCCCACATCAATTAGAGAAAGGAACAAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGAGGTGGATCGTGAGATCCCACTTAGAGAAAGGAACAAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGAGGTGGATCGTGAGATCCCACATCGGTTGGAGTGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTATAAACCTTGAGGGGAAGTCCAAACGGGAAATCTTAGAGATGACAATATCTGCTAGCGGTGGGTTTGGGTCATTACAAATATTGGGGGGTTCCACATCGATTAAAGAAGGGAACAAGTGCCAGTGGTGGGTTTGGGTCATTACAAATATTGGGGGGTTCCACATCGATTAAAGAAGGGAACAAGTGCCAGTGGACAATATCTGCTAGCAATGGGTTTTGATCGTTACAAATATTGGAGGGTCCCACATCAATTAGAGAAAGGAACAAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGAGGTGGATCGTGAGATCCCACTTAGAGAAAGGAACAAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGAGGTGGATCGTGAGATCCCACATCGGTTGGAGTGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTATAAACCTTGAGGGGAAGTCCAAACGGGAAATCTTAGAGATGACAATATCTGCTAGCGGTGGGTTTGGGTCATTACAAATATTGGGGGGTTCCACATCGATTAAAGAAGGGAACAAGTGCCAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGACAATATCTGCTAGCAATGGGTTTTGATCGTTACAAATATTGGAGGGTCCCACATCAATTAGAGAAAGGAACAAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGAGGTGGATCGTGAGATCCCACATCGGTTGGAGTGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTATAAACCTTGAGGGGAAGTCCAAACGGGAAATCTTAGAGATGACAATATCTGCTAGCGGTGGGTTTGGGTCATTACAAATATTGGGGGGTTCCACATCGATTAAAGAAGGGAACAAGTGCCAGTGGACAATATCTGCTAGCAATGGGTTTTGATCGTTACAAATATTGGAGGGTCCCACATCAATTAGAGAAAGGAACAAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGAGGTGGATCGTGAGATCCCACTTAGAGAAAGGAACAAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGAGGTGGATCGTGAGATCCCACATCGGTTGGAGTGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTATAAACCTTGAGGGGAAGTCCAAACGGGAAATCTTAGAGATGACAATATCTGCTAGCGGTGGGTTTGGGTCATTACAAATATTGGGGGGTTCCACATCGATTAAAGAAGGGAACAAGTGCCAGTGGTGGGTTTGGGTCATTACAAATATTGGGGGGTTCCACATCGATTAAAGAAGGGAACAAGTGCCAGTGAGGATGCTGGGCCCAAAAAGGGGTGGATTGTGAGATCCGAAGCATTATTTATAAGGGTATAGAAACCTCTCATTGGCAGACAAAATTTAAAACCTTGAGGGGAAGCTTGAAAGTGGAAACCCAAATAGGACAATATCTGCTAGTGGTGGGCTTGGGCCGTTACCGTTCGAAATCATTTTGGACTATACAACCCCTAGTAAGATGAAAATTTAAGACTACCTTCAATTGATTAATGCATTTTCTCTTCAAAAAAGATTCATAGAGTTTAAGATAAGTTTTGTGTTAAATTTGTATAGAGGTATTGTGAAGTTATTGTGAATACTCTGAGAAAAATATTGAATATTGCAGCAACTGGATATACAGAGTATTATTTTGATGCTGGATCTGGAAAAGTAAGCAGGTAAGAATGAATACCCACTTTATTATAGGCAGACCTCTAAATCCATTGGTGTTTCTGAATCTTTGTTGCTAAAGAATCACCATTTCTCAGGCATGTAGAACACTGGAATGTTCCTAAAATGGCTTTACTGAACCAAATTTTGAGACCCACTCGAGCTTGGTTGTGGTTTAAGAAACCAGGTGCTGCCTGATTCTTCTTTCTCATTAAGAACACAGCTTAGATCATAAACCTTTTCTTGTCAATGTTTTAATTTGATCTAGAAATCATATTTTGTGGGGTAATGTAAGGAAATTATATGTAATAGAGAGTTTTTTTTTTTTTTTTTCTTTTTGTTTTTGTTTCATAAAGTATTTGTAATAGATAGAGATTTATACAGATGGAACATGGAAGAATGAGATAGTATACAGCAGGTTGATTGGTGCCTACCTTTTTCTCTGAGTGGAATCTGCC

mRNA sequence

AAAATTTTCCCGCAAGAAACTTGGGAAGAAGATATTTTCACCTCTCATGGCTGCCATTCGTTTTCGCGCGGCAAAGCTCCAAAGCATTCTGATTCAATCAACTACCAAACCATCCATGTTTGTAAATTGCAATGGCGACGATCTTCCCTTTTCAATCACGTACGTCTCTTCAAACATCTCTCAACGCCATTCGACCTAATCGCCCTCTCAAAATCTGCAAAATCCGATGTCAAGGGGAAAATCCCGCTACCGGTTCGCCGAAGAATCGAGAATCTAAGCCCGAGAATGCGGTGTTGAAGGTCGCTTGGTATGGCTCCGAGCTCTTGGGGATCGCCGCTTCATTTCTCCGTCCGCCGACGGATGTTGAAACGCCTGTTAGGGCGCAGGAGCTTGCGAGAGATGTGTCCGGTGCAATTCGTCGCCCTGTGATTGTGGAAACGATTAAGAAGGATTTTGAGCGGTCGTACTTCGTCACAGGGAACCTTACTGTTGAAGCTTATGAAGAGCAGTGCGAATTTGCTGATCCGGCTGGTTCTTTCAAAGGTCTTAGCCGATTTAAAAGAAACTGTACAAATTTTGGATCCCTTGTTGATAAGTCAAACATGAAGCTTACCAAATGGGAGGATTTTGAGGACAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCATTTCCTTGGAGACCAATTCTATCTGCAACTGGATATACAGAGTATTATTTTGATGCTGGATCTGGAAAAGTAAGCAGGCATGTAGAACACTGGAATGTTCCTAAAATGGCTTTACTGAACCAAATTTTGAGACCCACTCGAGCTTGGTTGTGGTTTAAGAAACCAGGTGCTGCCTGATTCTTCTTTCTCATTAAGAACACAGCTTAGATCATAAACCTTTTCTTGTCAATGTTTTAATTTGATCTAGAAATCATATTTTGTGGGGTAATGTAAGGAAATTATATGTAATAGAGAGTTTTTTTTTTTTTTTTTCTTTTTGTTTTTGTTTCATAAAGTATTTGTAATAGATAGAGATTTATACAGATGGAACATGGAAGAATGAGATAGTATACAGCAGGTTGATTGGTGCCTACCTTTTTCTCTGAGTGGAATCTGCC

Coding sequence (CDS)

ATGGCGACGATCTTCCCTTTTCAATCACGTACGTCTCTTCAAACATCTCTCAACGCCATTCGACCTAATCGCCCTCTCAAAATCTGCAAAATCCGATGTCAAGGGGAAAATCCCGCTACCGGTTCGCCGAAGAATCGAGAATCTAAGCCCGAGAATGCGGTGTTGAAGGTCGCTTGGTATGGCTCCGAGCTCTTGGGGATCGCCGCTTCATTTCTCCGTCCGCCGACGGATGTTGAAACGCCTGTTAGGGCGCAGGAGCTTGCGAGAGATGTGTCCGGTGCAATTCGTCGCCCTGTGATTGTGGAAACGATTAAGAAGGATTTTGAGCGGTCGTACTTCGTCACAGGGAACCTTACTGTTGAAGCTTATGAAGAGCAGTGCGAATTTGCTGATCCGGCTGGTTCTTTCAAAGGTCTTAGCCGATTTAAAAGAAACTGTACAAATTTTGGATCCCTTGTTGATAAGTCAAACATGAAGCTTACCAAATGGGAGGATTTTGAGGACAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCATTTCCTTGGAGACCAATTCTATCTGCAACTGGATATACAGAGTATTATTTTGATGCTGGATCTGGAAAAGTAAGCAGGCATGTAGAACACTGGAATGTTCCTAAAATGGCTTTACTGAACCAAATTTTGAGACCCACTCGAGCTTGGTTGTGGTTTAAGAAACCAGGTGCTGCCTGA

Protein sequence

MATIFPFQSRTSLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPGAA

Homology

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BLAST of CmoCh17G004300 vs. ExPASy TrEMBL
Match: A0A6J1H5M4 (uncharacterized protein LOC111460260 OS=Cucurbita moschata OX=3662 GN=LOC111460260 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.5e-138
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MATIFPFQSRTSLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWY 60
           MATIFPFQSRTSLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWY
Sbjct: 1   MATIFPFQSRTSLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTV
Sbjct: 61  GSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL
Sbjct: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPGAA 240
           SFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPGAA
Sbjct: 181 SFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPGAA 239

[Close]

BLAST of CmoCh17G004300 vs. ExPASy TrEMBL
Match: A0A6J1KYC4 (uncharacterized protein LOC111499312 OS=Cucurbita maxima OX=3661 GN=LOC111499312 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 2.2e-134
Identity = 232/238 (97.48%), Postives = 234/238 (98.32%), Query Frame = 0


Query: 1   MATIFPFQSRTSLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWY 60
           MATIFPFQSRTSL+TSLNAIRPNRPLKIC IRCQG+NPAT SPKNRESKPENAVLKVAWY
Sbjct: 1   MATIFPFQSRTSLRTSLNAIRPNRPLKICTIRCQGDNPATDSPKNRESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAASFLRPPTDVETPVRAQEL RDVSGAIRRPVIVETIKKDFERSYFVTGNLTV
Sbjct: 61  GSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKW DFEDKGIGHWKFSCIL
Sbjct: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWVDFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPGA 239
           SFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPGA
Sbjct: 181 SFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPGA 238

[Close]

BLAST of CmoCh17G004300 vs. ExPASy TrEMBL
Match: A0A5D3BY85 (Nuclear transport factor 2 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001340 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.2e-117
Identity = 203/237 (85.65%), Postives = 215/237 (90.72%), Query Frame = 0


Query: 1   MATIFPFQSRTSLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWY 60
           MATI  FQ  +SLQTSL +IRPN  L+IC+I C+G NP T SP N+ESKPENAVLKVAWY
Sbjct: 1   MATIVSFQLHSSLQTSLYSIRPNPSLRICRIHCRGNNPTTDSPNNQESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAASFLRPP+DV+TPVRAQEL  DVSGAI RP+IVETIK+DF RSYFVTGNLT+
Sbjct: 61  GSELLGIAASFLRPPSDVQTPVRAQELTTDVSGAIPRPLIVETIKEDFRRSYFVTGNLTL 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           EAYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL
Sbjct: 121 EAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPG 238
           SFPWRPILSATGYT+YYFDA SGKV RHVEHWNVPKMALL QILRPTR WLWFKK G
Sbjct: 181 SFPWRPILSATGYTDYYFDARSGKVCRHVEHWNVPKMALLKQILRPTRDWLWFKKAG 237

[Close]

BLAST of CmoCh17G004300 vs. ExPASy TrEMBL
Match: A0A1S3C8H3 (uncharacterized protein LOC103497690 OS=Cucumis melo OX=3656 GN=LOC103497690 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.2e-117
Identity = 203/237 (85.65%), Postives = 215/237 (90.72%), Query Frame = 0


Query: 1   MATIFPFQSRTSLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWY 60
           MATI  FQ  +SLQTSL +IRPN  L+IC+I C+G NP T SP N+ESKPENAVLKVAWY
Sbjct: 1   MATIVSFQLHSSLQTSLYSIRPNPSLRICRIHCRGNNPTTDSPNNQESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAASFLRPP+DV+TPVRAQEL  DVSGAI RP+IVETIK+DF RSYFVTGNLT+
Sbjct: 61  GSELLGIAASFLRPPSDVQTPVRAQELTTDVSGAIPRPLIVETIKEDFRRSYFVTGNLTL 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           EAYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL
Sbjct: 121 EAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPG 238
           SFPWRPILSATGYT+YYFDA SGKV RHVEHWNVPKMALL QILRPTR WLWFKK G
Sbjct: 181 SFPWRPILSATGYTDYYFDARSGKVCRHVEHWNVPKMALLKQILRPTRDWLWFKKAG 237

[Close]

BLAST of CmoCh17G004300 vs. ExPASy TrEMBL
Match: A0A6J1CZI8 (uncharacterized protein LOC111016220 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016220 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.9e-112
Identity = 200/244 (81.97%), Postives = 216/244 (88.52%), Query Frame = 0


Query: 1   MATIFPFQSR--TSLQTS-LNAIRPNRPLKICKIRCQGE--NPATGSPKNRESKPENAVL 60
           MA I  FQS   T LQTS +N +RPN PLKIC+IRC+GE  NPAT S KNRES+PENA+L
Sbjct: 1   MAAICSFQSLTITPLQTSRINPLRPNSPLKICRIRCRGENPNPATDSAKNRESEPENALL 60

Query: 61  KVAWYGSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVT 120
           KVAWYGSELLGIAASFLR P+D E PVRA +LA DVSGAIRR +IVETIK+DF RSYFVT
Sbjct: 61  KVAWYGSELLGIAASFLRSPSDAEAPVRAPDLATDVSGAIRRGLIVETIKEDFGRSYFVT 120

Query: 121 GNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWK 180
           GNLT++AYEE+CEFADPAGSFKGL RF+RNCTNFGSLV+ SNMKLTKWEDFEDKGIGHWK
Sbjct: 121 GNLTLDAYEEECEFADPAGSFKGLRRFQRNCTNFGSLVENSNMKLTKWEDFEDKGIGHWK 180

Query: 181 FSCILSFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKK 240
           FSC+LSFPWRPILSATGYTEYYFDAGSGKV RHVEHWNVPKMALL QILRPTR WLWFKK
Sbjct: 181 FSCVLSFPWRPILSATGYTEYYFDAGSGKVCRHVEHWNVPKMALLKQILRPTREWLWFKK 240

[Close]

BLAST of CmoCh17G004300 vs. TAIR 10
Match: AT2G46100.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 299.7 bits (766), Expect = 2.1e-81
Identity = 136/208 (65.38%), Postives = 165/208 (79.33%), Query Frame = 0


Query: 21  RPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWYGSELLGIAASFLRPPTDVET 80
           R NR  +   + C+G+NP      ++  +P+N +LK+AWYGSELLGIAAS  R P +   
Sbjct: 27  RTNRRFEATGVSCRGQNPTDEPQTSKGPEPDNVLLKIAWYGSELLGIAASVFRSP-ETSP 86

Query: 81  PVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLS 140
            V   E+  D SG   R  +V++IK+DF+RSYFVTGNLT E YEE+CEFADPAGSFKGL+
Sbjct: 87  IVTGFEVPVDCSGRAVRVAVVDSIKQDFKRSYFVTGNLTPEVYEEKCEFADPAGSFKGLA 146

Query: 141 RFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILSATGYTEYYFDA 200
           RFKRNCTNFGSL++KSNMKL KWE+FEDKGIGHWKFSC++SFPW+PILSATGYTEYYFD 
Sbjct: 147 RFKRNCTNFGSLIEKSNMKLMKWENFEDKGIGHWKFSCVMSFPWKPILSATGYTEYYFDT 206

Query: 201 GSGKVSRHVEHWNVPKMALLNQILRPTR 229
            SGK+ RHVEHWNVPK+AL  Q+LRP+R
Sbjct: 207 ESGKICRHVEHWNVPKIALFKQLLRPSR 233

[Close]

BLAST of CmoCh17G004300 vs. TAIR 10
Match: AT2G46100.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 181.8 bits (460), Expect = 6.5e-46
Identity = 87/147 (59.18%), Postives = 109/147 (74.15%), Query Frame = 0


Query: 21  RPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWYGSELLGIAASFLRPPTDVET 80
           R NR  +   + C+G+NP      ++  +P+N +LK+AWYGSELLGIAAS  R P +   
Sbjct: 27  RTNRRFEATGVSCRGQNPTDEPQTSKGPEPDNVLLKIAWYGSELLGIAASVFRSP-ETSP 86

Query: 81  PVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLS 140
            V   E+  D SG   R  +V++IK+DF+RSYFVTGNLT E YEE+CEFADPAGSFKGL+
Sbjct: 87  IVTGFEVPVDCSGRAVRVAVVDSIKQDFKRSYFVTGNLTPEVYEEKCEFADPAGSFKGLA 146

Query: 141 RFKRNCTNFGSLVDKSNMKLTKWEDFE 168
           RFKRNCTNFGSL++KSNMKL KWE+FE
Sbjct: 147 RFKRNCTNFGSLIEKSNMKLMKWENFE 172

[Close]

BLAST of CmoCh17G004300 vs. TAIR 10
Match: AT3G04890.1 (Uncharacterized conserved protein (DUF2358) )

HSP 1 Score: 85.9 bits (211), Expect = 4.8e-17
Identity = 43/128 (33.59%), Postives = 64/128 (50.00%), Query Frame = 0


Query: 100 IVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMK 159
           ++  ++ D+   YFVTG LT   Y + C F DP  SF+G   ++RN       ++ ++++
Sbjct: 80  VMGILRSDYRNFYFVTGVLTSAIYSDDCIFEDPTISFQGTELYERNLKLLVPFLEDASIE 139

Query: 160 LTKWEDFEDKG----IGHWKFSCILSFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVP 219
           L   E  E       +  WK    L  PWRP++S  G T Y  D    K+ RHVE WNV 
Sbjct: 140 LQNMEKSESSQRNYILATWKLRTYLKLPWRPLISINGNTVYDLDK-DFKIVRHVESWNVS 199

Query: 220 KMALLNQI 224
            +  + QI
Sbjct: 200 ALEAIGQI 206

[Close]

BLAST of CmoCh17G004300 vs. TAIR 10
Match: AT3G04890.2 (Uncharacterized conserved protein (DUF2358) )

HSP 1 Score: 68.6 bits (166), Expect = 8.0e-12
Identity = 33/104 (31.73%), Postives = 51/104 (49.04%), Query Frame = 0


Query: 100 IVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMK 159
           ++  ++ D+   YFVTG LT   Y + C F DP  SF+G   ++RN       ++ ++++
Sbjct: 80  VMGILRSDYRNFYFVTGVLTSAIYSDDCIFEDPTISFQGTELYERNLKLLVPFLEDASIE 139

Query: 160 LTKWEDFEDKG----IGHWKFSCILSFPWRPILSATGYTEYYFD 200
           L   E  E       +  WK    L  PWRP++S  G T Y  D
Sbjct: 140 LQNMEKSESSQRNYILATWKLRTYLKLPWRPLISINGNTVYDLD 183

The following BLAST results are available for this feature:

BLAST of CmoCh17G004300 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh17G004300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5M4	1.5e-138	100.00	uncharacterized protein LOC111460260 OS=Cucurbita moschata OX=3662 GN=LOC1114602...	[more]
A0A6J1KYC4	2.2e-134	97.48	uncharacterized protein LOC111499312 OS=Cucurbita maxima OX=3661 GN=LOC111499312...	[more]
A0A5D3BY85	4.2e-117	85.65	Nuclear transport factor 2 family protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3C8H3	4.2e-117	85.65	uncharacterized protein LOC103497690 OS=Cucumis melo OX=3656 GN=LOC103497690 PE=...	[more]
A0A6J1CZI8	6.9e-112	81.97	uncharacterized protein LOC111016220 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CmoCh17G004300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46100.1	2.1e-81	65.38	Nuclear transport factor 2 (NTF2) family protein	[more]
AT2G46100.2	6.5e-46	59.18	Nuclear transport factor 2 (NTF2) family protein	[more]
AT3G04890.1	4.8e-17	33.59	Uncharacterized conserved protein (DUF2358)	[more]
AT3G04890.2	8.0e-12	31.73	Uncharacterized conserved protein (DUF2358)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018790	Protein of unknown function DUF2358	PFAM	PF10184	DUF2358	coord: 100..208 e-value: 8.8E-11 score: 42.1
None	No IPR available	PANTHER	PTHR34123	FAMILY NOT NAMED	coord: 11..229
None	No IPR available	PANTHER	PTHR34123:SF1	OS04G0578200 PROTEIN	coord: 11..229
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 119..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G004300.1	CmoCh17G004300.1	mRNA