CmoCh17G002580 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCCGAGAGGCATTTTATTCAGATGTTACTTTGGGCTTTGGTTTGTGGCCCATTGTGGTCCACATCAACCGGCCCAAAAACAACGTAACTAAGCAATTTAGAAAAGAAAAGGATTAAGGTCCCAAATCTCATGCCAAAACTGGAGATCAAAGTGGAAGCTTATTCCCTGTAATCTTCGTTGAGATTACAGAGGAATTTACAGAGACAGAGAGTAGGTAATTGTTGTTATTGTGTTTGCCATTGATGGGTGGAGATTGAGATTTGAAATTGAGATTGAGAATCTGGCTAGCCATTTCATTTTTGTTGGCAAATTCTAGCCAAGAAATCTGGCGAACCTTGGAGGATTGAGGGCTCGGTTGTCATTGAAGCATTCCGTTTCTGATCACAACGACGAGGAGGAGGAGTGCCGGCCTTGGCGTCGCAGGCTTTTTATGGCTTTCACATGGCGCTCCGCCCTCAAGATTACCTTCTTACTTATACTTGTTGCTGCTGCAGTGATTGCTTGTTTCACCCTCCCAATAGAGAAGGTATGAAATTCTTGTTTCCAAAAATTCTCACTACTGCATTCTTGTTCCTCCCTGATGATCTACTGCGCATTGATTTCTCTTAATTTTCCATGATCCTGGATGTTTTTTTTGATGTCGCACATCCATTTTTATTTCCATCTGTTATTGAATTGTGTTTGAGTTTAACATTTGAGGTCTGGAATATCTGATCAAATCAATACTGCTATTGTTTTACGTATTTGTGTTTCAACGTTATAGTGTGTTTAGTTCGTGAAACTGATGAACTACTTGAAGTCTATTTGTTGGCTTTCGAGGCTGGAAGATTTATGACGAATTACTCGTTTCTGATATTTAATTTAATGTCATATGATTTGTATCGAATCGACCACATATTTGAAAACTTAACGCCGTTGCAGATTCTGAAGGACTTTTTACTATGGGTTGATCAAGATCTTGGCGCTTGGGGTCCGCTTGTGCTGTAAGTCGGTGTAGCTTAGTCCCTTGCAGAATCACTCAAGTTGCTTTTAAATTGTCTGTTCCATCGCTTTCCCTGTCTCTTACTTTTGGGGGTATATTGTTAGGTCTCTTGCATACATTCCTTTGACAGTGCTGGCAGTTCCTGCTTCAATACTTACGGTAAGCATCAACTGATCCTTCTTATACCTGGAAAATATATAACGTGCAAGGAAGAAGGCCACTGAAATTATCTTATTTATATGACCTTAGATGATGGTATGCCTTGTCTGTCTTTCAGCTTGGTGGTGGTTATCTATTTGGGTTACCTGTGGGCTTTGTTGCTGATTCCATTGGTGCAACTGTTGGGGCCGGGGCAGCTTTCCTTCTTGGACGAACTGTACTATTTGGACCCTTATGATTATCTTTTATCCATATCGATTTCGTGAATTTTAGTATTGCAATATTGAATTCTTGTTGGGCAAGTTTATTATTTCGTTTGTATTTTTTAATTGCGCAACTATTAGACACAGATATGCTGCTAGTTGGATCATCTTTTTTCTGGCACTCCTTACAGATTGGGAAGTCATTTGTTGTTTCCAAGCTGAAGGATTATCCGCAATTTCATTCGGTTGCAATTGCTATTAATCGGTCTGGATTTAAGGTTCGTCTATTTTGTTTACAATCACCGTATTTGTTTGTAAAATGACGTTTGCATGAGCATATGGATTCGTATTCTTTCTTATCTTTTATTTAATCTTTAAAATCACATGTTTCTTCCTATAAAAAAAAAAAAAAAATACTATCACTTGTTTCTTCTGTTTCAATGGAAAAGAAATAAAAACTTGTATGTGTGGCTTTTAGTTTATTTTCTTCTTTATTTAATGTGAATGAACAGCATTGGCTGTTTCTTGAATATCAATTCTTGTTTATGTCATACTTTTTATTGCACTAAAATTGCCTTGTATAAGTGTAAAACTTGTAATGAACGCTAGTTTTTCCCCCTTCCCTGTGAATATCATGTATCTATGGAAAAATGTTTCTCCCCTTGCACAACGTGACGAGGGAAGTATACTGATGAGTTGTAGATGTAACCATAGTTTAAATTTTGAAATGCATTCCCAGAGAAAAGAGATGATTCCAGTACATTTATATTGCTAAACTTAAACATACGATTCCAATTAATTGTGAGTAGGCAGTTGGGTGTTTTCCAATGAGTGGAAGTTGATGTAGAATGTTTGGTCAGTTAAACTGTTTCTTGGTAACTGGCCGAAAAGTTAATTTGCATTTTAGTACCTATGAAAAAGCCGACTGATATGAAATCATTATTTTTCTTTCATTAGAATGGCTTCTCTGGTATTTTTATTTGAAATAATGTGTATATATCTCACTTGGAAACAGTGAGGAATAGGCTACACATGCCGTGACCCAAAGTTTCACTTTTGCAGATAGTATTGCTGCTCCGGCTTGTCCCTTTACTTCCATTTAACATGTTGAATTACCTATTGTCCGTGACTCCTGTTTCACTAGGGGAATACATGTTGGCTTCATGGTTGGGAATGATGGTACCTTCTTCTCATGTTCTTATAAAATTGATACATGCCTTGTGTATTTCATATCACAATTTTGGCATAATTTGTTTGTTGATCAAAGTATTTTATCTGGACAAGCACAAACTATTGGTGATTTCTGTTGCATTTGTATGGTCACGTCTCATTTAAAAAATTATTAAATTTCTGTCTCCAAATTTTAGTTGTCTGTCCATCTGTTGTGCATGGACAGAGTTTTTTATTGCAAAGAGTGATAACTTTTATCTTCATTGGTTTTTCTGTCATGATTTGTTAAATCCATGAATATTGTAGTTGCCGACCCTTTGGCTCTTGTTAGTTCATGTTGATAAGTACATTAATTATGAAGACAAATATCATATAGGATTCTGGAGGTAGTTTAAGAGGACTGAAGAGGAAGTCTGTTAGGAAGAAAAATGGCTAGGTGCCAAGTACAATTCAGTTAGCCTTTTGAGAGGACTAGCTCTCTCCTACCCAAAGCTAGCCCACTCTTAGCTTGCCTCACACTGGCCACAATTTTGGTATAATTACTCCTCCCAGTCATTACTAAATGCTATTCTCATTCCCTGATATAATATCACAAGGCCTGTTTGTTCTTCTAGATTGACACCTTGCTCGCCCAATATCCATATTCCGTGTTTTAATCTTCTTGGATAATTATATAGTATCGAGGAGGGACCTAGCATAATGTTTATCAATGTATAGTTATTGTTGAATGCTACAAAATCCTCGTAGACACTGTTCTTCATCCAGATGAAAGGTGGAAATTTTTCAAATTAGCTATTCTTCGTTGTATTTCTTTTCTTCTGCATTTGGGCTTGATTCAGCGTCTCCATGCTAGAATCAAGGAATCATGACTTTTATTTTTAAATGTGGAGATTTATCAACTTTAGGTACTAATTTTAATTACAAATTTGATCTTTCAATGTCCTGTTGCAGCCCATCACCCTTGCACTAGTGTATGTTGGAACCACACTCAAAGATCTTTCTGATGTTACGCATGGTTGGGGAGAATTGTCGAAGACTCGTTTGGTAAGTGCTCTTTATCTACTACATTGGTGAGGGATAGTAACATCTCTTTTTTGGTTGTTGAGTATCAGGATCCTAATGACACGTTTCATAGTAGACAGCCCAAATGTAACACTAATCTCATGAACCATCAACATTCATTGATCAAAAATATGTTGCGGAAGTACCCTGGTGCTTGAATAGCTTCCACACTACAGATACCTTTTGTTCTTTTTTGCCTGATGGCTATTCTTTCCTTTATTGTGGATGCAGGCATTCATTATATTGGGTCTTGTGGTATCTGGTAAGTTAATATTATTTGCAGAAACTTGCATCTTTTTTGGGTTTCATTGTCTTGTTTGTTTTCAGCTGGCGACTTTTTAA ATGGGCCGAGAGGCATTTTATTCAGATCCAAGAAATCTGGCGAACCTTGGAGGATTGAGGGCTCGGTTGTCATTGAAGCATTCCGTTTCTGATCACAACGACGAGGAGGAGGAGTGCCGGCCTTGGCGTCGCAGGCTTTTTATGGCTTTCACATGGCGCTCCGCCCTCAAGATTACCTTCTTACTTATACTTGTTGCTGCTGCAGTGATTGCTTGTTTCACCCTCCCAATAGAGAAGATTCTGAAGGACTTTTTACTATGGGTTGATCAAGATCTTGGCGCTTGGGGTCCGCTTGTGCTGTCTCTTGCATACATTCCTTTGACAGTGCTGGCAGTTCCTGCTTCAATACTTACGCTTGGTGGTGGTTATCTATTTGGGTTACCTGTGGGCTTTGTTGCTGATTCCATTGGTGCAACTGTTGGGGCCGGGGCAGCTTTCCTTCTTGGACGAACTATTGGGAAGTCATTTGTTGTTTCCAAGCTGAAGGATTATCCGCAATTTCATTCGGTTGCAATTGCTATTAATCGGTCTGGATTTAAGCTGGCGACTTTTTAA ATGGGCCGAGAGGCATTTTATTCAGATCCAAGAAATCTGGCGAACCTTGGAGGATTGAGGGCTCGGTTGTCATTGAAGCATTCCGTTTCTGATCACAACGACGAGGAGGAGGAGTGCCGGCCTTGGCGTCGCAGGCTTTTTATGGCTTTCACATGGCGCTCCGCCCTCAAGATTACCTTCTTACTTATACTTGTTGCTGCTGCAGTGATTGCTTGTTTCACCCTCCCAATAGAGAAGATTCTGAAGGACTTTTTACTATGGGTTGATCAAGATCTTGGCGCTTGGGGTCCGCTTGTGCTGTCTCTTGCATACATTCCTTTGACAGTGCTGGCAGTTCCTGCTTCAATACTTACGCTTGGTGGTGGTTATCTATTTGGGTTACCTGTGGGCTTTGTTGCTGATTCCATTGGTGCAACTGTTGGGGCCGGGGCAGCTTTCCTTCTTGGACGAACTATTGGGAAGTCATTTGTTGTTTCCAAGCTGAAGGATTATCCGCAATTTCATTCGGTTGCAATTGCTATTAATCGGTCTGGATTTAAGCTGGCGACTTTTTAA MGREAFYSDPRNLANLGGLRARLSLKHSVSDHNDEEEECRPWRRRLFMAFTWRSALKITFLLILVAAAVIACFTLPIEKILKDFLLWVDQDLGAWGPLVLSLAYIPLTVLAVPASILTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGKSFVVSKLKDYPQFHSVAIAINRSGFKLATF Homology
BLAST of CmoCh17G002580 vs. ExPASy Swiss-Prot
Match: Q55909 (TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0305 PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.6e-12 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 0
BLAST of CmoCh17G002580 vs. ExPASy Swiss-Prot
Match: P76219 (TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli (strain K12) OX=83333 GN=ydjX PE=3 SV=2) HSP 1 Score: 46.6 bits (109), Expect = 3.5e-04 Identity = 34/124 (27.42%), Postives = 61/124 (49.19%), Query Frame = 0
BLAST of CmoCh17G002580 vs. ExPASy TrEMBL
Match: A0A5A7SW85 (TVP38/TMEM64 family membrane protein slr0305-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00770 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 4.0e-83 Identity = 160/172 (93.02%), Postives = 167/172 (97.09%), Query Frame = 0
BLAST of CmoCh17G002580 vs. ExPASy TrEMBL
Match: A0A498IBM5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_041506 PE=4 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 6.6e-70 Identity = 137/170 (80.59%), Postives = 154/170 (90.59%), Query Frame = 0
BLAST of CmoCh17G002580 vs. ExPASy TrEMBL
Match: A0A498HKR0 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_013238 PE=4 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 1.5e-69 Identity = 138/180 (76.67%), Postives = 154/180 (85.56%), Query Frame = 0
BLAST of CmoCh17G002580 vs. ExPASy TrEMBL
Match: A0A5J5BZZ6 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_000272 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 2.5e-69 Identity = 135/170 (79.41%), Postives = 155/170 (91.18%), Query Frame = 0
BLAST of CmoCh17G002580 vs. ExPASy TrEMBL
Match: A0A2N9FBN3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16159 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 6.8e-67 Identity = 128/157 (81.53%), Postives = 146/157 (92.99%), Query Frame = 0
BLAST of CmoCh17G002580 vs. TAIR 10
Match: AT5G19070.1 (SNARE associated Golgi protein family ) HSP 1 Score: 217.2 bits (552), Expect = 1.1e-56 Identity = 106/134 (79.10%), Postives = 124/134 (92.54%), Query Frame = 0
BLAST of CmoCh17G002580 vs. TAIR 10
Match: AT1G03260.1 (SNARE associated Golgi protein family ) HSP 1 Score: 174.5 bits (441), Expect = 8.0e-44 Identity = 89/134 (66.42%), Postives = 112/134 (83.58%), Query Frame = 0
BLAST of CmoCh17G002580 vs. TAIR 10
Match: AT1G22850.1 (SNARE associated Golgi protein family ) HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07 Identity = 33/107 (30.84%), Postives = 55/107 (51.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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