CmoCh17G002580 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh17G002580
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionTVP38/TMEM64 family membrane protein slr0305-like
LocationCmo_Chr17: 1525990 .. 1529911 (-)
RNA-Seq ExpressionCmoCh17G002580
SyntenyCmoCh17G002580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCGAGAGGCATTTTATTCAGATGTTACTTTGGGCTTTGGTTTGTGGCCCATTGTGGTCCACATCAACCGGCCCAAAAACAACGTAACTAAGCAATTTAGAAAAGAAAAGGATTAAGGTCCCAAATCTCATGCCAAAACTGGAGATCAAAGTGGAAGCTTATTCCCTGTAATCTTCGTTGAGATTACAGAGGAATTTACAGAGACAGAGAGTAGGTAATTGTTGTTATTGTGTTTGCCATTGATGGGTGGAGATTGAGATTTGAAATTGAGATTGAGAATCTGGCTAGCCATTTCATTTTTGTTGGCAAATTCTAGCCAAGAAATCTGGCGAACCTTGGAGGATTGAGGGCTCGGTTGTCATTGAAGCATTCCGTTTCTGATCACAACGACGAGGAGGAGGAGTGCCGGCCTTGGCGTCGCAGGCTTTTTATGGCTTTCACATGGCGCTCCGCCCTCAAGATTACCTTCTTACTTATACTTGTTGCTGCTGCAGTGATTGCTTGTTTCACCCTCCCAATAGAGAAGGTATGAAATTCTTGTTTCCAAAAATTCTCACTACTGCATTCTTGTTCCTCCCTGATGATCTACTGCGCATTGATTTCTCTTAATTTTCCATGATCCTGGATGTTTTTTTTGATGTCGCACATCCATTTTTATTTCCATCTGTTATTGAATTGTGTTTGAGTTTAACATTTGAGGTCTGGAATATCTGATCAAATCAATACTGCTATTGTTTTACGTATTTGTGTTTCAACGTTATAGTGTGTTTAGTTCGTGAAACTGATGAACTACTTGAAGTCTATTTGTTGGCTTTCGAGGCTGGAAGATTTATGACGAATTACTCGTTTCTGATATTTAATTTAATGTCATATGATTTGTATCGAATCGACCACATATTTGAAAACTTAACGCCGTTGCAGATTCTGAAGGACTTTTTACTATGGGTTGATCAAGATCTTGGCGCTTGGGGTCCGCTTGTGCTGTAAGTCGGTGTAGCTTAGTCCCTTGCAGAATCACTCAAGTTGCTTTTAAATTGTCTGTTCCATCGCTTTCCCTGTCTCTTACTTTTGGGGGTATATTGTTAGGTCTCTTGCATACATTCCTTTGACAGTGCTGGCAGTTCCTGCTTCAATACTTACGGTAAGCATCAACTGATCCTTCTTATACCTGGAAAATATATAACGTGCAAGGAAGAAGGCCACTGAAATTATCTTATTTATATGACCTTAGATGATGGTATGCCTTGTCTGTCTTTCAGCTTGGTGGTGGTTATCTATTTGGGTTACCTGTGGGCTTTGTTGCTGATTCCATTGGTGCAACTGTTGGGGCCGGGGCAGCTTTCCTTCTTGGACGAACTGTACTATTTGGACCCTTATGATTATCTTTTATCCATATCGATTTCGTGAATTTTAGTATTGCAATATTGAATTCTTGTTGGGCAAGTTTATTATTTCGTTTGTATTTTTTAATTGCGCAACTATTAGACACAGATATGCTGCTAGTTGGATCATCTTTTTTCTGGCACTCCTTACAGATTGGGAAGTCATTTGTTGTTTCCAAGCTGAAGGATTATCCGCAATTTCATTCGGTTGCAATTGCTATTAATCGGTCTGGATTTAAGGTTCGTCTATTTTGTTTACAATCACCGTATTTGTTTGTAAAATGACGTTTGCATGAGCATATGGATTCGTATTCTTTCTTATCTTTTATTTAATCTTTAAAATCACATGTTTCTTCCTATAAAAAAAAAAAAAAAATACTATCACTTGTTTCTTCTGTTTCAATGGAAAAGAAATAAAAACTTGTATGTGTGGCTTTTAGTTTATTTTCTTCTTTATTTAATGTGAATGAACAGCATTGGCTGTTTCTTGAATATCAATTCTTGTTTATGTCATACTTTTTATTGCACTAAAATTGCCTTGTATAAGTGTAAAACTTGTAATGAACGCTAGTTTTTCCCCCTTCCCTGTGAATATCATGTATCTATGGAAAAATGTTTCTCCCCTTGCACAACGTGACGAGGGAAGTATACTGATGAGTTGTAGATGTAACCATAGTTTAAATTTTGAAATGCATTCCCAGAGAAAAGAGATGATTCCAGTACATTTATATTGCTAAACTTAAACATACGATTCCAATTAATTGTGAGTAGGCAGTTGGGTGTTTTCCAATGAGTGGAAGTTGATGTAGAATGTTTGGTCAGTTAAACTGTTTCTTGGTAACTGGCCGAAAAGTTAATTTGCATTTTAGTACCTATGAAAAAGCCGACTGATATGAAATCATTATTTTTCTTTCATTAGAATGGCTTCTCTGGTATTTTTATTTGAAATAATGTGTATATATCTCACTTGGAAACAGTGAGGAATAGGCTACACATGCCGTGACCCAAAGTTTCACTTTTGCAGATAGTATTGCTGCTCCGGCTTGTCCCTTTACTTCCATTTAACATGTTGAATTACCTATTGTCCGTGACTCCTGTTTCACTAGGGGAATACATGTTGGCTTCATGGTTGGGAATGATGGTACCTTCTTCTCATGTTCTTATAAAATTGATACATGCCTTGTGTATTTCATATCACAATTTTGGCATAATTTGTTTGTTGATCAAAGTATTTTATCTGGACAAGCACAAACTATTGGTGATTTCTGTTGCATTTGTATGGTCACGTCTCATTTAAAAAATTATTAAATTTCTGTCTCCAAATTTTAGTTGTCTGTCCATCTGTTGTGCATGGACAGAGTTTTTTATTGCAAAGAGTGATAACTTTTATCTTCATTGGTTTTTCTGTCATGATTTGTTAAATCCATGAATATTGTAGTTGCCGACCCTTTGGCTCTTGTTAGTTCATGTTGATAAGTACATTAATTATGAAGACAAATATCATATAGGATTCTGGAGGTAGTTTAAGAGGACTGAAGAGGAAGTCTGTTAGGAAGAAAAATGGCTAGGTGCCAAGTACAATTCAGTTAGCCTTTTGAGAGGACTAGCTCTCTCCTACCCAAAGCTAGCCCACTCTTAGCTTGCCTCACACTGGCCACAATTTTGGTATAATTACTCCTCCCAGTCATTACTAAATGCTATTCTCATTCCCTGATATAATATCACAAGGCCTGTTTGTTCTTCTAGATTGACACCTTGCTCGCCCAATATCCATATTCCGTGTTTTAATCTTCTTGGATAATTATATAGTATCGAGGAGGGACCTAGCATAATGTTTATCAATGTATAGTTATTGTTGAATGCTACAAAATCCTCGTAGACACTGTTCTTCATCCAGATGAAAGGTGGAAATTTTTCAAATTAGCTATTCTTCGTTGTATTTCTTTTCTTCTGCATTTGGGCTTGATTCAGCGTCTCCATGCTAGAATCAAGGAATCATGACTTTTATTTTTAAATGTGGAGATTTATCAACTTTAGGTACTAATTTTAATTACAAATTTGATCTTTCAATGTCCTGTTGCAGCCCATCACCCTTGCACTAGTGTATGTTGGAACCACACTCAAAGATCTTTCTGATGTTACGCATGGTTGGGGAGAATTGTCGAAGACTCGTTTGGTAAGTGCTCTTTATCTACTACATTGGTGAGGGATAGTAACATCTCTTTTTTGGTTGTTGAGTATCAGGATCCTAATGACACGTTTCATAGTAGACAGCCCAAATGTAACACTAATCTCATGAACCATCAACATTCATTGATCAAAAATATGTTGCGGAAGTACCCTGGTGCTTGAATAGCTTCCACACTACAGATACCTTTTGTTCTTTTTTGCCTGATGGCTATTCTTTCCTTTATTGTGGATGCAGGCATTCATTATATTGGGTCTTGTGGTATCTGGTAAGTTAATATTATTTGCAGAAACTTGCATCTTTTTTGGGTTTCATTGTCTTGTTTGTTTTCAGCTGGCGACTTTTTAA

mRNA sequence

ATGGGCCGAGAGGCATTTTATTCAGATCCAAGAAATCTGGCGAACCTTGGAGGATTGAGGGCTCGGTTGTCATTGAAGCATTCCGTTTCTGATCACAACGACGAGGAGGAGGAGTGCCGGCCTTGGCGTCGCAGGCTTTTTATGGCTTTCACATGGCGCTCCGCCCTCAAGATTACCTTCTTACTTATACTTGTTGCTGCTGCAGTGATTGCTTGTTTCACCCTCCCAATAGAGAAGATTCTGAAGGACTTTTTACTATGGGTTGATCAAGATCTTGGCGCTTGGGGTCCGCTTGTGCTGTCTCTTGCATACATTCCTTTGACAGTGCTGGCAGTTCCTGCTTCAATACTTACGCTTGGTGGTGGTTATCTATTTGGGTTACCTGTGGGCTTTGTTGCTGATTCCATTGGTGCAACTGTTGGGGCCGGGGCAGCTTTCCTTCTTGGACGAACTATTGGGAAGTCATTTGTTGTTTCCAAGCTGAAGGATTATCCGCAATTTCATTCGGTTGCAATTGCTATTAATCGGTCTGGATTTAAGCTGGCGACTTTTTAA

Coding sequence (CDS)

ATGGGCCGAGAGGCATTTTATTCAGATCCAAGAAATCTGGCGAACCTTGGAGGATTGAGGGCTCGGTTGTCATTGAAGCATTCCGTTTCTGATCACAACGACGAGGAGGAGGAGTGCCGGCCTTGGCGTCGCAGGCTTTTTATGGCTTTCACATGGCGCTCCGCCCTCAAGATTACCTTCTTACTTATACTTGTTGCTGCTGCAGTGATTGCTTGTTTCACCCTCCCAATAGAGAAGATTCTGAAGGACTTTTTACTATGGGTTGATCAAGATCTTGGCGCTTGGGGTCCGCTTGTGCTGTCTCTTGCATACATTCCTTTGACAGTGCTGGCAGTTCCTGCTTCAATACTTACGCTTGGTGGTGGTTATCTATTTGGGTTACCTGTGGGCTTTGTTGCTGATTCCATTGGTGCAACTGTTGGGGCCGGGGCAGCTTTCCTTCTTGGACGAACTATTGGGAAGTCATTTGTTGTTTCCAAGCTGAAGGATTATCCGCAATTTCATTCGGTTGCAATTGCTATTAATCGGTCTGGATTTAAGCTGGCGACTTTTTAA

Protein sequence

MGREAFYSDPRNLANLGGLRARLSLKHSVSDHNDEEEECRPWRRRLFMAFTWRSALKITFLLILVAAAVIACFTLPIEKILKDFLLWVDQDLGAWGPLVLSLAYIPLTVLAVPASILTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGKSFVVSKLKDYPQFHSVAIAINRSGFKLATF
Homology
BLAST of CmoCh17G002580 vs. ExPASy Swiss-Prot
Match: Q55909 (TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0305 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.6e-12
Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 0

Query: 81  LKDFLLWVDQDLGAWGPLVLSLAYIPLTVLAVPASILTLGGGYLFGLPVGFVADSIGATV 140
           L + L W+D  LG W  +   L Y   TV+ +P SILTLG G +FG+ +G +   IGAT+
Sbjct: 5   LLNALQWID-GLGTWAAIAFMLLYTVATVVFLPGSILTLGAGVVFGVILGSIYVFIGATL 64

Query: 141 GAGAAFLLGRTIGKSFVVSKLKDYPQFHSVAIAINRSGFKL 182
           GA AAFL+GR + + +V  K+    +F ++  A+ + G K+
Sbjct: 65  GATAAFLVGRYLARGWVAKKIAGNQKFKAIDEAVGKEGLKI 104

BLAST of CmoCh17G002580 vs. ExPASy Swiss-Prot
Match: P76219 (TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli (strain K12) OX=83333 GN=ydjX PE=3 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 3.5e-04
Identity = 34/124 (27.42%), Postives = 61/124 (49.19%), Query Frame = 0

Query: 57  KITFLLILVAAAVIACFTLPIEKILKDF--LLWVDQDLGAWGPLVLSLAYIPLTVLAVPA 116
           K  F  ++ A  + A     +  +L D   L  + +  G +G  +  L +I  T+L +P 
Sbjct: 6   KFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSGFFGYSLYILLFIIATLLLLPG 65

Query: 117 SILTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGKSFVVSKLKDYPQFHSVAIAI 176
           SIL + GG +FG  +G +   I AT+ +  +FLL R +G+  ++  +     F ++   I
Sbjct: 66  SILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYVGHSNTFQAIEKGI 125

Query: 177 NRSG 179
            R+G
Sbjct: 126 ARNG 129

BLAST of CmoCh17G002580 vs. ExPASy TrEMBL
Match: A0A5A7SW85 (TVP38/TMEM64 family membrane protein slr0305-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00770 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 4.0e-83
Identity = 160/172 (93.02%), Postives = 167/172 (97.09%), Query Frame = 0

Query: 10  PRNLANLGGLRARLSLKHSVSDHNDEEEECRPWRRRLFMAFTWRSALKITFLLILVAAAV 69
           P NLANLGGLRARLSLKHS+SDHND+EEECRPWRRRL MAFTWRSALKIT LL+L+AAAV
Sbjct: 4   PGNLANLGGLRARLSLKHSISDHNDDEEECRPWRRRLSMAFTWRSALKITLLLLLLAAAV 63

Query: 70  IACFTLPIEKILKDFLLWVDQDLGAWGPLVLSLAYIPLTVLAVPASILTLGGGYLFGLPV 129
            ACFTLPIEKILKDFLLWV +DLGAWGPLVLS+AYIPLTVLAVPASILTLGGGYLFGLPV
Sbjct: 64  TACFTLPIEKILKDFLLWVHEDLGAWGPLVLSIAYIPLTVLAVPASILTLGGGYLFGLPV 123

Query: 130 GFVADSIGATVGAGAAFLLGRTIGKSFVVSKLKDYPQFHSVAIAINRSGFKL 182
           GFVADSIGATVGAGAAFLLGRTIGKSFVVSKLKDYPQFHSVAIAINRSGFK+
Sbjct: 124 GFVADSIGATVGAGAAFLLGRTIGKSFVVSKLKDYPQFHSVAIAINRSGFKI 175

BLAST of CmoCh17G002580 vs. ExPASy TrEMBL
Match: A0A498IBM5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_041506 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 6.6e-70
Identity = 137/170 (80.59%), Postives = 154/170 (90.59%), Query Frame = 0

Query: 12  NLANLGGLRARLSLKHSVSDHNDEEEECRPWRRRLFMAFTWRSALKITFLLILVAAAVIA 71
           NLANLGGLR RLSLK  +  +ND++EECRPWRRR  MAFTW SAL+I  LL+L+AA   A
Sbjct: 62  NLANLGGLRPRLSLKQPI--YNDDDEECRPWRRRFSMAFTWGSALRIALLLLLLAAVATA 121

Query: 72  CFTLPIEKILKDFLLWVDQDLGAWGPLVLSLAYIPLTVLAVPASILTLGGGYLFGLPVGF 131
           CFTLP+EKILKDFLLWV+QDLG WGPLVL++AYIPLTVLAVPAS+LTLGGGYLFGLPVGF
Sbjct: 122 CFTLPVEKILKDFLLWVEQDLGPWGPLVLAVAYIPLTVLAVPASVLTLGGGYLFGLPVGF 181

Query: 132 VADSIGATVGAGAAFLLGRTIGKSFVVSKLKDYPQFHSVAIAINRSGFKL 182
           VADSIGAT+GAGAAFLLGRTIG+SFVVS+LKDYPQF +VAIAI RSGFK+
Sbjct: 182 VADSIGATLGAGAAFLLGRTIGRSFVVSRLKDYPQFRAVAIAIRRSGFKI 229

BLAST of CmoCh17G002580 vs. ExPASy TrEMBL
Match: A0A498HKR0 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_013238 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.5e-69
Identity = 138/180 (76.67%), Postives = 154/180 (85.56%), Query Frame = 0

Query: 2   GREAFYSDPRNLANLGGLRARLSLKHSVSDHNDEEEECRPWRRRLFMAFTWRSALKITFL 61
           G    +    NLANLGGLR RLSLK  +  +ND++EECRPWRRR  MAFTW SAL+IT L
Sbjct: 31  GSPHLFGAESNLANLGGLRPRLSLKQPI--YNDDDEECRPWRRRFSMAFTWASALRITLL 90

Query: 62  LILVAAAVIACFTLPIEKILKDFLLWVDQDLGAWGPLVLSLAYIPLTVLAVPASILTLGG 121
           L+L+AA   ACFTLPIEKILK FLLWV+ DLG WGPLVL++AYIPLTVLAVPAS+LTLGG
Sbjct: 91  LLLLAAVATACFTLPIEKILKHFLLWVEHDLGPWGPLVLAIAYIPLTVLAVPASVLTLGG 150

Query: 122 GYLFGLPVGFVADSIGATVGAGAAFLLGRTIGKSFVVSKLKDYPQFHSVAIAINRSGFKL 181
           GYLFGLPVGF ADSIGATVGAGAAFLLGRTIG+SFVVS+LKDYPQF +VAIAI RSGFK+
Sbjct: 151 GYLFGLPVGFFADSIGATVGAGAAFLLGRTIGRSFVVSRLKDYPQFQAVAIAIRRSGFKI 208

BLAST of CmoCh17G002580 vs. ExPASy TrEMBL
Match: A0A5J5BZZ6 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_000272 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.5e-69
Identity = 135/170 (79.41%), Postives = 155/170 (91.18%), Query Frame = 0

Query: 12  NLANLGGLRARLSLKHSVSDHNDEEEECRPWRRRLFMAFTWRSALKITFLLILVAAAVIA 71
           NLANLGGLR RLSLK ++++  D EE+CRPWRRRL MAF WRS ++IT LL+L+AAA  A
Sbjct: 68  NLANLGGLRPRLSLKQAIAEDQD-EEDCRPWRRRLSMAFNWRSVVRITLLLLLLAAAATA 127

Query: 72  CFTLPIEKILKDFLLWVDQDLGAWGPLVLSLAYIPLTVLAVPASILTLGGGYLFGLPVGF 131
           CFTLPIEKILKDFL W++QDLG WGPLVL++AYIPLTVLAVPAS+LTLGGGYLFGLPVGF
Sbjct: 128 CFTLPIEKILKDFLQWIEQDLGPWGPLVLAVAYIPLTVLAVPASVLTLGGGYLFGLPVGF 187

Query: 132 VADSIGATVGAGAAFLLGRTIGKSFVVSKLKDYPQFHSVAIAINRSGFKL 182
           +ADSIGATVGAGAAFLLGRTIG+SFV+SKLK+YPQF +VAIAI RSGFK+
Sbjct: 188 LADSIGATVGAGAAFLLGRTIGRSFVISKLKNYPQFRAVAIAIQRSGFKI 236

BLAST of CmoCh17G002580 vs. ExPASy TrEMBL
Match: A0A2N9FBN3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16159 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 6.8e-67
Identity = 128/157 (81.53%), Postives = 146/157 (92.99%), Query Frame = 0

Query: 28  SVSDHNDEEEECRPWRRRLFMAFTWRSALKITFLLILVAAAVIACFTLPIEKILKDFLLW 87
           ++SD+ND++EECRPWRRR+FMAFTW SAL+IT L+ L+AA V ACFTLP+EKILKDFLLW
Sbjct: 677 AISDYNDDDEECRPWRRRIFMAFTWGSALRITLLVFLIAAVVTACFTLPVEKILKDFLLW 736

Query: 88  VDQDLGAWGPLVLSLAYIPLTVLAVPASILTLGGGYLFGLPVGFVADSIGATVGAGAAFL 147
           V+QDLG WGPLVL++AYIPLTVLAVPAS+LTLGGGYLFGLPVGFVADSIGATVGAGAAFL
Sbjct: 737 VEQDLGPWGPLVLAVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFL 796

Query: 148 LGRTIGKSFVVSKLKDYPQFHSVAIAINRSGFKLATF 185
           LGRTIG+SFVVSKLKDYP+F SVAIAI  SGFK+  +
Sbjct: 797 LGRTIGRSFVVSKLKDYPKFRSVAIAIRGSGFKILMY 833

BLAST of CmoCh17G002580 vs. TAIR 10
Match: AT5G19070.1 (SNARE associated Golgi protein family )

HSP 1 Score: 217.2 bits (552), Expect = 1.1e-56
Identity = 106/134 (79.10%), Postives = 124/134 (92.54%), Query Frame = 0

Query: 48  MAFTWRSALKITFLLILVAAAVIACFTLPIEKILKDFLLWVDQDLGAWGPLVLSLAYIPL 107
           MAFTW SAL+I+ LLILVAA V+AC+ LP+EK+LKDFLLWV+QDLG WGP  L++AYIPL
Sbjct: 1   MAFTWGSALRISVLLILVAAIVLACYFLPVEKLLKDFLLWVEQDLGPWGPFALAVAYIPL 60

Query: 108 TVLAVPASILTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGKSFVVSKLKDYPQF 167
           TVLAVPAS+LTLGGGYLFGLP+GFVADS+GAT+G+GAAFLLGRTIGK FVV+KLKDYPQF
Sbjct: 61  TVLAVPASVLTLGGGYLFGLPIGFVADSVGATLGSGAAFLLGRTIGKPFVVAKLKDYPQF 120

Query: 168 HSVAIAINRSGFKL 182
            SVA+AI +SGFK+
Sbjct: 121 QSVALAIEKSGFKI 134

BLAST of CmoCh17G002580 vs. TAIR 10
Match: AT1G03260.1 (SNARE associated Golgi protein family )

HSP 1 Score: 174.5 bits (441), Expect = 8.0e-44
Identity = 89/134 (66.42%), Postives = 112/134 (83.58%), Query Frame = 0

Query: 48  MAFTWRSALKITFLLILVAAAVIACFTLPIEKILKDFLLWVDQDLGAWGPLVLSLAYIPL 107
           M+FT  S  +I   L+L+ A V A   LP+E+ LKDFLLW+ +DLG +GPL L+LAYIPL
Sbjct: 4   MSFT-PSTFRIAISLLLLVAIVSAVIFLPVEQKLKDFLLWIKEDLGPFGPLALALAYIPL 63

Query: 108 TVLAVPASILTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGKSFVVSKLKDYPQF 167
           T++AVPAS+LTLGGGYLFGLPVGFVADS+GAT+GA AAFLLGRTIGKS+V SK+K YP+F
Sbjct: 64  TIVAVPASVLTLGGGYLFGLPVGFVADSLGATLGATAAFLLGRTIGKSYVTSKIKHYPKF 123

Query: 168 HSVAIAINRSGFKL 182
            +V++AI +SGFK+
Sbjct: 124 QAVSVAIQKSGFKI 136

BLAST of CmoCh17G002580 vs. TAIR 10
Match: AT1G22850.1 (SNARE associated Golgi protein family )

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 33/107 (30.84%), Postives = 55/107 (51.40%), Query Frame = 0

Query: 77  IEKILKDFLLWVDQDLGAWGPLVLSLAYIPLTVLAVPASILTLGGGYLFGLPVGFVADSI 136
           I   L  F  ++ +  G  G  +    Y  L +LA+PA  LT+  G LFG  +G +  SI
Sbjct: 134 INTFLTQFSTYI-EGYGTAGYALFIAVYAGLEILAIPALPLTMSAGLLFGPLIGTIIVSI 193

Query: 137 GATVGAGAAFLLGRTIGKSFVVSKLKDYPQFHSVAIAINRSGFKLAT 184
             T+ A  AFL+ R   +  ++  ++D  +F ++  AI  +GF++ T
Sbjct: 194 SGTMAASVAFLIARYFARERILKLVEDNKKFLAIDKAIGENGFRVVT 239

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q559091.6e-1239.60TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 68... [more]
P762193.5e-0427.42TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli (strain K12) OX=83... [more]
Match NameE-valueIdentityDescription
A0A5A7SW854.0e-8393.02TVP38/TMEM64 family membrane protein slr0305-like OS=Cucumis melo var. makuwa OX... [more]
A0A498IBM56.6e-7080.59Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_041506 PE=4 SV=1[more]
A0A498HKR01.5e-6976.67Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_013238 PE=4 SV=1[more]
A0A5J5BZZ62.5e-6979.41Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_000272 PE=4 SV=1[more]
A0A2N9FBN36.8e-6781.53Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16159 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G19070.11.1e-5679.10SNARE associated Golgi protein family [more]
AT1G03260.18.0e-4466.42SNARE associated Golgi protein family [more]
AT1G22850.11.2e-0730.84SNARE associated Golgi protein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032816SNARE associated Golgi proteinPFAMPF09335SNARE_assoccoord: 112..182
e-value: 5.3E-10
score: 39.8
NoneNo IPR availablePANTHERPTHR12677:SF51SUBFAMILY NOT NAMEDcoord: 26..181
IPR015414Transmembrane protein TMEM64PANTHERPTHR12677UNCHARACTERIZEDcoord: 26..181

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G002580.1CmoCh17G002580.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane