Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAAGCCATCAGGTATCAAATCTAGATTTCAAACCCTAATTCAATTCCTGGACATGGGTTGTTACAACTTTTATACCCTATTCAATAAACGTGAGATTGAGAGGATTCAAACACACTTAAATGAGGTTGACAACGAGAGGAGTAATACATCCTCAACTCAATGACCTAAAACCCCTCTGATTCTGAAAAACATCAATAATAACCATTTAGTTATTGAAAATTAAGTTGTAAATACTAAATATATATTTTTTTTAAAAAAAAACTTATTCTTATTATTAAAGTTTAAATAAAAATTCAAATCCTTAATTAGAAATAAAGCTTCCAAGGAATATTTTCTTTTAAAACAAAATGCCAAACTTAGTGACCACTTTAACTCGTTTTGTTCTTCATGAGCTTTACAAGCCAGATGGTGTGCCTAGCTGAACCTGAAATCTCTCCTTAACTTAGGGTTTCTTTTTCCATGCTTTAATAATAAAGAACTCTAAAATTAAAAATAAATAAATAAATAAATACAAATCCATCCATTACAACCTTTTATTGCATGTTTTTTAAGAAAGGTTATGTGCAAAGAGAAATAAGCTGTACATGCATGCCACCGTACCAAAACTAAATAAACTAATACAAAAAAAGAGTAAGTTTTTGATCGAGATATATTTTAAGTTCATAGACAAATATTTCATTTTTAATTTTTTCAAATTAATTTATTTCGCTCACACTCGTCTCTGTTGGGAGGAGTTTCACATTTAAGAGGATGATCACGAGTTTATAAATAAATAATACATTTCCATTGATATGAACTATTTTGAAAAATTCAAAAGCAAAACCACGAGAGTTTATACTCAAAGTGAACAATCATACCATTGTGAAGGATAATAGTTTCTAACATTGATATCAAAATCATGAACTTATTGACAATGAACTTAGTGATGTCAATAGAATTTTTAAATGTTTGAAACATTAATAGGGAAGTAAACGTTTTCTATGTGAAAAAAGGCCATATATAATTCATATATTTTTAATTCTCTTATAGATGGTTAGTGGTAGGAGTGAAGATATATCACTAATACTAAGGTTAAATAGATGATTTAAATATTTATGACCCAAACAAAATCTCACATGAACTTAAAATAGTGTATAGACAAAATTATCATACTTAGTAATAAAACGACCGTCAATTTGATTATAACCCAACTGATTTAGACATATAAATTTAACTAAACGTATTTATTTCCGGATACAATATGTGTGTGAATCCTACATTGGTTAGAGAGAGGAACGAAACATTTCTTATAAGGATGTGGAAACCTCTCCCTAGCAGATGCGTTCTAAAATTGTGAGGTTGACAGTGATATGTAACAGGCAATGACCTCCAAATAGGGTGGATTGTGAGATCTCACATCGGTTAAAGAGGGGAACGAAGCATTCTTTATAAGGGTGTAAAAACCTCTCCCTAACAGACACGTTTTAGAATCGTGAGGCTAACAACAATACAGTATGACAATAAAAGTATAACATTTGACTTTCGAACATTGTTATTGTTTTTGTTTTTGTTTTTTTTTATTTTCCCCCATTATTCATAGGTATTCTTGTGATGGACGGCAAGATGGTCCCACTAAGGCAATTTATTAAAGCTCAATCTTCACATAGATTGTTCTTCAGACCAAAAACAGTTGTTTTTCTGTTGCCTTCACCTTTATGTTACTTTCCATTTTGGGTTATAAATAGGGTATGAATGTTAAGATAACAAAACACAGAGACAACAACGTTATTCCCTTTGCCTCCTTCTGACAAGATCTCCAATCTTTTAGCCTTCCACAAAACCATGTCTGTCTTAGCTCCAAAAATACCCTCCACCCCAATGGCCAACCCTAGGCTTCAAACTCACAGGGACGAGTTGAGTTTGAAAAACTTGTCCGACGAAGTCGTTGCAGGTCATATATATTCTAAGCATCGTGACGATGATACCGTCAAAATCGATGTCAATAACTACATTTCGTTTCTCGAAAGTATTTTTGCCCATGTTGATCAAATCCACGAATCTTCTTTTCAAGTAACTTACAAAATGTTTTATATATTTTCTTGTTCTGGTTCTAGTTCGATTTCTCGTTTATATATGGCTCGTTGTTTGTCGTAGGGCCATGATGGACATGTGGCATTCTCCGAGGATTCATATAAAGCCAACGTGACAATTGATCCACCGCTTGATATTCTTCAGACAATTTCTATCAAGGTTATATATTTTACAAATTTATTTGGTTTGTTATTTACTTTTTACTGATATTTTCAAAATTTAAACTAAATTTTAAAAACTTTATTTTTATTTTTATAAATTTAAAAAATATTTTAAATATAAAAAATAATTACAATTTTAAAAAACAAAAAATAAAAATTACATAATCTCAAATTCTTGTTTTTTAATTTTATTTTTCATCATATAATAAATTGGGTCGGTTTTAACATATTCTAAAATTAGGATTTTTTTTTTTCAAAAAGCTAATTATGAAGTGAAACTTTCATGTGTGACTTAATAATTTTTAGAATAGAAAAGGAAAAAAAAATGATTACAATAATTTTATTTTTATTTTTATGTATCCATTTTATTTTAAAAATATTTAAATTCTAGTAGGTGTAATTTTAATAAATCTTAAAATTAGTTTTCTCACTATTAAAAAATAAAACTAATTTTTTTAATATATATTTTATAAAAAGTATTCTCATTCTTCACTTTATGGAAATTATCATTATTATTATCCCATTTTGTTAAAAATTAACTTCAAATTAAAAATTAATTTTAATACTTTTTAAAATATAGAAATTAAAATGAAATAATAAACAAAAATAACCCTTTTAAAATAGTATTTTTGATGGGGTAAATTATTTTAGTGAGATGCATTTATCTCTTTGATTCAATAAGATTAAAATCGATAAAAATACGCTACTAGCTTGTAAATATGATCTCTACTATGACTGCACAGCTCCCAAATGCACCTGTTTGTACATGATTTCGATTGGTTTATGTTACTTTCGTGATGTCTTTTTCGTCGTAGTCCAAGATTTAAAACTTCGAAAAATCAGGTCGACTGAAATTAACATTTTGGTATGATGTTATTCAGTTGGCGTTCAAGGGTCCGGGGACAGAGAAAGCTCACCAAACCACTCTCGAGATCCTGGACATACTAATGAGCTATCCATGGGAAGCAAAGGCAATTCTATGTCTAGTAGCATTTGGCAGTGATTATGGACATCTATGGCACCTCAACCATCACTCCCATATCGACCCACTTGCAAAAACCTTAGCAAACATCCACCAATCGGCATCATTGAAAAAACACTTAGACTCCTTCAAGTATCGCCAAGTGGTTTTCAGCTCAAGAAGTCTCATTTTCTTGTGCCTTCAAGTCATCAAACTCATGAACCAAATAAGACTCTTCTCCAAATTTGATACCAAGGAGATTCCCGAGCTGGCTTCTGCCCTTCGTCAAATCCCTCTTTTTACTTATTGGGTTATACACACAATCGTTGCTTCCACCGCTGAAATCTCAAGCTATCTCACAAATACCGAGTAAGTTCCTGTTAGATAAATACGACTCTCCACAATAGTACGATATTGTCACTTTGAGCATAAGCTTTCGTAGCTTTATTTTGGGCTTCCCCCAAAAGATCTCATGCTAATGGAGGGAGTATTCCTTAATTATAAATCCATGATCATTCCCTAAATTAATCGACGTAGGACTTTCATCCAACAGTTTCAACGTAATTATGTAATTTTGATGGTGTTTTTGATGGATTTCAGGGGCCAATCACAAATTTACTTGAATGAATTGAATGAGAGGCTTAATGCTATCCTCAACATACTTGGAGATTATTTGAATATTTTTCAAGAACAGCTAGGTTGATTATTATATTAAAGCTTGATTATTTATTTATTTATTTATTAAGATTTATGTTCCTTGATTATTCATGTTGAAAGTGCTTGGTTTTGTGTGGTGCAGGGGAGATTAATCTATTTAGGTGGCTTATTGATCATATTGATCTGTATCCTACTGAAATAACGTTAGTTGTGTCTAAGCTGCTTGAAGGCAAGGTTAATGCTAAGCCTTTGATAAATTGTTCCACTCTCATGGAGGTAAGTTATGCATATCATTTATTGATTCTTTTTTTTTTTTTAGCTTTTCTTGGTCGATGGAATATGCTTCAACCAATCGATCTATGCTCAGTTAGAGATGTCCATGGAACAGGATGGGACGTAGAGGCCTTTTCCATCTTCGTCTCTATCTCCTATTTCAATTTTTATCCCTTCAAAACTTTTAATTTAATTTTGCGAGGACCGAGATGGAACGTGAGATCTCACATTGGTTGGGAGGAAAACGAAGCATTCTTCACAAGAGTGTGAAAACCTCTCCCTAGCATATACATTTTAAAAACGTTGAGGAAAAGTTTAAAACGAAAACCCAAAAAATGACAAGCTAATGGTGGACTTGGATTGTTATATAGAAAAATTCTTCATAAAAAATAGATCACTGAATTTTTCTCATCCTTGTATATCTTTAAAAAAAATTATTTCAAAGAAAATTTTTCTAGAATAATTTCAATAATATAAAACATCTTAGTAAATTCAATAGTATTTATTATATTGAACATAATTTCTAAAAACTCAAATTTCAATATTAAAATACATCCATATAAAATGAACGGGACAAAGATTTGGAGGGATCACGAACAACAATATAATTTGGTTCGCAACCCCTTCGAGCTAATGAAAAAAAATTTCTATTAACTTCTCCTCTTATTCTCCCACTTAAACACTGAGATCAGTCCTAGGCCATTTAGGTTAAATGGATATCTCTATGCTTGGTGTCAATTTATCCACATTATTTGGATCTAAAATTTGATTTTCTTTAATATACGTATTTTTATAGGAAAAAATCGAAGATGCATTGAGAGAGAAGAACGTGATATTACTTATTTCTGGATTGGAAATTTCAAATGATGATATTCGAGCTCTGAATTTAATGTACGATGAATTGAAAAGAGAAGATAATTACAAAATCGTATGGATTCCTATGATCAATTCCCAAGATTTTGATGAAGAAACTCGTAAAAGATACGAGCTGGTGAGGTCAACAATGAAATGGTATGCGGTGCAATATACCACAAAAATTGCTGGATTAAGATTCTTAGAAGAAATTTGGCAAGTTAGAGAGGATGCTTTAATGGTTGTTCTTGACTCAAAATCAAAGGTGAAATTTTCAAATGCAATTCACTTGCTTCGTGTTTGGGGAAACAATGCCATTCCCTTTACAGTTGAGAGAGCAAATGCTTTATTGAGGAAGAATTGGCCTGAATCAACCATTGTGAAGTTCATCAACCAACCAAGATTACAAAGCTGGGTATGCAATTTCTATTCGCATTTGTATTCATATTCATGTTTAATACGTTTCTGAACGCTTAGAGCTGTCGTTTTATCAGATTGATCAAGAAAGGAGTATCATATTCTACGGAGGAAAAGATCAGAATTGGATCCAACGATTTGAAGAGAAAGTGGTGGACATCAAGAACGATAGATCAATGAGAGACGCTGGAATAAATTTCGAAATTGTTCCGGTAGGAAACAATATAGACAACAATAATGCTTCGTTCATGTCTCGTTTTTGGATTACACAATGGGGATTTTTTGTAGTCAAAAGCCAATTGACCGGCTCAAGTGCCAGCGAAACTACAGAAGACATCCTACGATTGATTTCTTATGAAAATGAAAACGGTTGGGCTATTCTTACGGTTGGCTCAGCGCCTTTGCTTGTGGGTCGTGGAAACCTAATTCTTAGAGTGTTTGAAGATTTTAACCGATGGAAAAAGAATTTGAACCTAAAGGGTTTTCCGAATGCTTTCCAAGATTATTTCAATGAGATGGCTCTCCAGACTCATCAGTGTGAACGAGTGACTCTTCCAGGGTTTAGTGGATGGATTCCTATGATTGTTAATTGCCCTGAGTGTCCTCGCTTCATGGAGACAGGTATTAATTTCAACTGCTGCCATGGTCGTAATCCTAACAATTGAGAAGCTTGGATCCGGGGTTGACGAATTAACTATATATACTACTAAATAATAGGGTTAACCCCTTTGTTGCATCTCATGTATGCCTATTAGGGCACATGGTTTTACCATATCAAAATCTTCAAATTTTCTATTAATACTATGCATATGCTACTAAATATTGAAGCCATTTGGCCCTTTTTCGTTGCTTCAAAATCTTCTATGTATGTTACTGATTGGAATAATATGAACTTTACTTTATGATAGCAAGCCAACTGAATTTTCTCTTTCA
mRNA sequence
ATGTCGAAGCCATCAGAGACAACAACGTTATTCCCTTTGCCTCCTTCTGACAAGATCTCCAATCTTTTAGCCTTCCACAAAACCATGTCTGTCTTAGCTCCAAAAATACCCTCCACCCCAATGGCCAACCCTAGGCTTCAAACTCACAGGGACGAGTTGAGTTTGAAAAACTTGTCCGACGAAGTCGTTGCAGGTCATATATATTCTAAGCATCGTGACGATGATACCGTCAAAATCGATGTCAATAACTACATTTCGTTTCTCGAAAGTATTTTTGCCCATGTTGATCAAATCCACGAATCTTCTTTTCAAGGCCATGATGGACATGTGGCATTCTCCGAGGATTCATATAAAGCCAACGTGACAATTGATCCACCGCTTGATATTCTTCAGACAATTTCTATCAAGTTGGCGTTCAAGGGTCCGGGGACAGAGAAAGCTCACCAAACCACTCTCGAGATCCTGGACATACTAATGAGCTATCCATGGGAAGCAAAGGCAATTCTATGTCTAGTAGCATTTGGCAGTGATTATGGACATCTATGGCACCTCAACCATCACTCCCATATCGACCCACTTGCAAAAACCTTAGCAAACATCCACCAATCGGCATCATTGAAAAAACACTTAGACTCCTTCAAGTATCGCCAAGTGGTTTTCAGCTCAAGAAGTCTCATTTTCTTGTGCCTTCAAGTCATCAAACTCATGAACCAAATAAGACTCTTCTCCAAATTTGATACCAAGGAGATTCCCGAGCTGGCTTCTGCCCTTCGTCAAATCCCTCTTTTTACTTATTGGGTTATACACACAATCGTTGCTTCCACCGCTGAAATCTCAAGCTATCTCACAAATACCGAGGGCCAATCACAAATTTACTTGAATGAATTGAATGAGAGGCTTAATGCTATCCTCAACATACTTGGAGATTATTTGAATATTTTTCAAGAACAGCTAGGGGAGATTAATCTATTTAGGTGGCTTATTGATCATATTGATCTGTATCCTACTGAAATAACGTTAGTTGTGTCTAAGCTGCTTGAAGGCAAGGTTAATGCTAAGCCTTTGATAAATTGTTCCACTCTCATGGAGGAAAAAATCGAAGATGCATTGAGAGAGAAGAACGTGATATTACTTATTTCTGGATTGGAAATTTCAAATGATGATATTCGAGCTCTGAATTTAATGTACGATGAATTGAAAAGAGAAGATAATTACAAAATCGTATGGATTCCTATGATCAATTCCCAAGATTTTGATGAAGAAACTCGTAAAAGATACGAGCTGGTGAGGTCAACAATGAAATGGTATGCGGTGCAATATACCACAAAAATTGCTGGATTAAGATTCTTAGAAGAAATTTGGCAAGTTAGAGAGGATGCTTTAATGGTTGTTCTTGACTCAAAATCAAAGGTGAAATTTTCAAATGCAATTCACTTGCTTCGTGTTTGGGGAAACAATGCCATTCCCTTTACAGTTGAGAGAGCAAATGCTTTATTGAGGAAGAATTGGCCTGAATCAACCATTGTGAAGTTCATCAACCAACCAAGATTACAAAGCTGGATTGATCAAGAAAGGAGTATCATATTCTACGGAGGAAAAGATCAGAATTGGATCCAACGATTTGAAGAGAAAGTGGTGGACATCAAGAACGATAGATCAATGAGAGACGCTGGAATAAATTTCGAAATTGTTCCGGTAGGAAACAATATAGACAACAATAATGCTTCGTTCATGTCTCGTTTTTGGATTACACAATGGGGATTTTTTGTAGTCAAAAGCCAATTGACCGGCTCAAGTGCCAGCGAAACTACAGAAGACATCCTACGATTGATTTCTTATGAAAATGAAAACGGTTGGGCTATTCTTACGGTTGGCTCAGCGCCTTTGCTTGTGGGTCGTGGAAACCTAATTCTTAGAGTGTTTGAAGATTTTAACCGATGGAAAAAGAATTTGAACCTAAAGGGTTTTCCGAATGCTTTCCAAGATTATTTCAATGAGATGGCTCTCCAGACTCATCAGTGTGAACGAGTGACTCTTCCAGGGTTTAGTGGATGGATTCCTATGATTGTTAATTGCCCTGAGTGTCCTCGCTTCATGGAGACAGGTATTAATTTCAACTGCTGCCATGGTCGTAATCCTAACAATTGAGAAGCTTGGATCCGGGGTTGACGAATTAACTATATATACTACTAAATAATAGGGTTAACCCCTTTGTTGCATCTCATGTATGCCTATTAGGGCACATGGTTTTACCATATCAAAATCTTCAAATTTTCTATTAATACTATGCATATGCTACTAAATATTGAAGCCATTTGGCCCTTTTTCGTTGCTTCAAAATCTTCTATGTATGTTACTGATTGGAATAATATGAACTTTACTTTATGATAGCAAGCCAACTGAATTTTCTCTTTCA
Coding sequence (CDS)
ATGTCGAAGCCATCAGAGACAACAACGTTATTCCCTTTGCCTCCTTCTGACAAGATCTCCAATCTTTTAGCCTTCCACAAAACCATGTCTGTCTTAGCTCCAAAAATACCCTCCACCCCAATGGCCAACCCTAGGCTTCAAACTCACAGGGACGAGTTGAGTTTGAAAAACTTGTCCGACGAAGTCGTTGCAGGTCATATATATTCTAAGCATCGTGACGATGATACCGTCAAAATCGATGTCAATAACTACATTTCGTTTCTCGAAAGTATTTTTGCCCATGTTGATCAAATCCACGAATCTTCTTTTCAAGGCCATGATGGACATGTGGCATTCTCCGAGGATTCATATAAAGCCAACGTGACAATTGATCCACCGCTTGATATTCTTCAGACAATTTCTATCAAGTTGGCGTTCAAGGGTCCGGGGACAGAGAAAGCTCACCAAACCACTCTCGAGATCCTGGACATACTAATGAGCTATCCATGGGAAGCAAAGGCAATTCTATGTCTAGTAGCATTTGGCAGTGATTATGGACATCTATGGCACCTCAACCATCACTCCCATATCGACCCACTTGCAAAAACCTTAGCAAACATCCACCAATCGGCATCATTGAAAAAACACTTAGACTCCTTCAAGTATCGCCAAGTGGTTTTCAGCTCAAGAAGTCTCATTTTCTTGTGCCTTCAAGTCATCAAACTCATGAACCAAATAAGACTCTTCTCCAAATTTGATACCAAGGAGATTCCCGAGCTGGCTTCTGCCCTTCGTCAAATCCCTCTTTTTACTTATTGGGTTATACACACAATCGTTGCTTCCACCGCTGAAATCTCAAGCTATCTCACAAATACCGAGGGCCAATCACAAATTTACTTGAATGAATTGAATGAGAGGCTTAATGCTATCCTCAACATACTTGGAGATTATTTGAATATTTTTCAAGAACAGCTAGGGGAGATTAATCTATTTAGGTGGCTTATTGATCATATTGATCTGTATCCTACTGAAATAACGTTAGTTGTGTCTAAGCTGCTTGAAGGCAAGGTTAATGCTAAGCCTTTGATAAATTGTTCCACTCTCATGGAGGAAAAAATCGAAGATGCATTGAGAGAGAAGAACGTGATATTACTTATTTCTGGATTGGAAATTTCAAATGATGATATTCGAGCTCTGAATTTAATGTACGATGAATTGAAAAGAGAAGATAATTACAAAATCGTATGGATTCCTATGATCAATTCCCAAGATTTTGATGAAGAAACTCGTAAAAGATACGAGCTGGTGAGGTCAACAATGAAATGGTATGCGGTGCAATATACCACAAAAATTGCTGGATTAAGATTCTTAGAAGAAATTTGGCAAGTTAGAGAGGATGCTTTAATGGTTGTTCTTGACTCAAAATCAAAGGTGAAATTTTCAAATGCAATTCACTTGCTTCGTGTTTGGGGAAACAATGCCATTCCCTTTACAGTTGAGAGAGCAAATGCTTTATTGAGGAAGAATTGGCCTGAATCAACCATTGTGAAGTTCATCAACCAACCAAGATTACAAAGCTGGATTGATCAAGAAAGGAGTATCATATTCTACGGAGGAAAAGATCAGAATTGGATCCAACGATTTGAAGAGAAAGTGGTGGACATCAAGAACGATAGATCAATGAGAGACGCTGGAATAAATTTCGAAATTGTTCCGGTAGGAAACAATATAGACAACAATAATGCTTCGTTCATGTCTCGTTTTTGGATTACACAATGGGGATTTTTTGTAGTCAAAAGCCAATTGACCGGCTCAAGTGCCAGCGAAACTACAGAAGACATCCTACGATTGATTTCTTATGAAAATGAAAACGGTTGGGCTATTCTTACGGTTGGCTCAGCGCCTTTGCTTGTGGGTCGTGGAAACCTAATTCTTAGAGTGTTTGAAGATTTTAACCGATGGAAAAAGAATTTGAACCTAAAGGGTTTTCCGAATGCTTTCCAAGATTATTTCAATGAGATGGCTCTCCAGACTCATCAGTGTGAACGAGTGACTCTTCCAGGGTTTAGTGGATGGATTCCTATGATTGTTAATTGCCCTGAGTGTCCTCGCTTCATGGAGACAGGTATTAATTTCAACTGCTGCCATGGTCGTAATCCTAACAATTGA
Protein sequence
MSKPSETTTLFPLPPSDKISNLLAFHKTMSVLAPKIPSTPMANPRLQTHRDELSLKNLSDEVVAGHIYSKHRDDDTVKIDVNNYISFLESIFAHVDQIHESSFQGHDGHVAFSEDSYKANVTIDPPLDILQTISIKLAFKGPGTEKAHQTTLEILDILMSYPWEAKAILCLVAFGSDYGHLWHLNHHSHIDPLAKTLANIHQSASLKKHLDSFKYRQVVFSSRSLIFLCLQVIKLMNQIRLFSKFDTKEIPELASALRQIPLFTYWVIHTIVASTAEISSYLTNTEGQSQIYLNELNERLNAILNILGDYLNIFQEQLGEINLFRWLIDHIDLYPTEITLVVSKLLEGKVNAKPLINCSTLMEEKIEDALREKNVILLISGLEISNDDIRALNLMYDELKREDNYKIVWIPMINSQDFDEETRKRYELVRSTMKWYAVQYTTKIAGLRFLEEIWQVREDALMVVLDSKSKVKFSNAIHLLRVWGNNAIPFTVERANALLRKNWPESTIVKFINQPRLQSWIDQERSIIFYGGKDQNWIQRFEEKVVDIKNDRSMRDAGINFEIVPVGNNIDNNNASFMSRFWITQWGFFVVKSQLTGSSASETTEDILRLISYENENGWAILTVGSAPLLVGRGNLILRVFEDFNRWKKNLNLKGFPNAFQDYFNEMALQTHQCERVTLPGFSGWIPMIVNCPECPRFMETGINFNCCHGRNPNN
Homology
BLAST of CmoCh17G001790 vs. ExPASy Swiss-Prot
Match:
Q9SS87 (Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana OX=3702 GN=SEOB PE=1 SV=1)
HSP 1 Score: 197.2 bits (500), Expect = 6.3e-49
Identity = 185/752 (24.60%), Postives = 320/752 (42.55%), Query Frame = 0
Query: 23 LAFHKTMSVLAPKIPSTPMANPRLQTHRDELSLKNLSDEVVAGHIYSKHRDDDTVKIDVN 82
LA HK + P + P L SDE + + + D ++ V
Sbjct: 13 LAGHKNTTGKTPSMEMIPAT-----------GLAMSSDESMMLKLIQQTHSPDAREVQVR 72
Query: 83 NYISFLESIFAHVDQIHESSFQGHDGHVAF----SEDSYKAN---VTIDPPLDILQTISI 142
+S +E I + ++ D + + +ED + +D + ++
Sbjct: 73 GLLSLVEDI------LDRATLDSEDTNASMLPLPTEDKLMQSSMMSVLDSVSYAIDRVAC 132
Query: 143 KLAFKGPGTEKAHQTTLEILDILMSYPWEAKAILCLVAFGSDYGHLWHLNHHSHIDPLAK 202
++A+K +H+ T+ + + L S+ W+ K +L L AF +YG W L + LAK
Sbjct: 133 EIAYKSLTGSDSHEITMSVFEHLSSFQWDGKLVLTLAAFALNYGEFWLLVQFYSKNQLAK 192
Query: 203 TLANIHQSASLKKHLDSFKYRQVVFSSRSLIFLCLQVIKLMNQI-RLFSKFDTKEIPELA 262
+LA + L + V LI V + ++ L ++ T ++P+L+
Sbjct: 193 SLAML----KLVPVQNRVTLESVSQGLNDLIREMKSVTACVVELSELPDRYITPDVPQLS 252
Query: 263 SALRQIPLFTYWVIHTIVASTAEIS--SYLTNTEGQSQIYLNELNERLNAILNI---LGD 322
L IP+ YW I +++A ++I+ + + + +Q+ L E + N + NI L +
Sbjct: 253 RILSTIPIAVYWTIRSVIACISQINMITAMGHEMMNTQMDLWETSMLANKLKNIHDHLAE 312
Query: 323 YLNIF------QEQLGEINLFRWLID--HIDLYPTEITLVVSKLLEGKVNAKPLIN--CS 382
L + Q + + L D HID K+L V+ KP I
Sbjct: 313 TLRLCYRHIEKQRSSESLKVLHSLFDTTHID---------NMKILTALVHPKPHITPLQD 372
Query: 383 TLMEEKIE-DALREKNVILLISGLEISNDDIRALNLMYDELKR---------EDNYKIVW 442
L + K+ D LR K V+LLIS L I D++ +Y E +R Y++VW
Sbjct: 373 GLTKRKVHLDVLRRKTVLLLISDLNILQDELSIFEQIYTESRRNLVGVDGKSHMPYEVVW 432
Query: 443 IPMINS-QDFDEE--TRKRYELVRSTMKWYAVQYTTKIAG--LRFLEEIWQVREDALMVV 502
+P+++ +DF+ +K++E +R M WY+V I + F+ W ++VV
Sbjct: 433 VPVVDPIEDFERSPILQKKFEDLRDPMPWYSVDSPKLIERHVVEFMRGRWHFMNKPILVV 492
Query: 503 LDSKSKVKFSNAIHLLRVWGNNAIPFTVERANALLRKNWPESTIVKFINQPRLQSWIDQE 562
+D + NA+H++ +WG A PFT R L R+ ++ + +WI +
Sbjct: 493 IDPQGNEASLNALHMIWIWGTEAFPFTRSREEELWRRETFSLNLIVDGIDSVIFNWIKPD 552
Query: 563 RSIIFYGGKDQNWIQRFEEKVVDIKNDRSMRDAGINFEIVPVGNN--------------I 622
I YGG D +WI+RF + + +D+ +N E+ VG I
Sbjct: 553 NYIFLYGGDDLDWIRRF-----TMAAKATAKDSNVNLEMAYVGKRNHSHREQIRRISEVI 612
Query: 623 DNNNAS-------FMSRFWITQWGFFVVKSQL-TGSSASETTEDILRLISYENENGWAIL 682
+ N S M FW K QL + + I +++SY+ GWA+L
Sbjct: 613 RSENLSHSWAEPALMWFFWTRLESMLYSKIQLGKADDHDDVMQGIKKILSYDKLGGWALL 672
Query: 683 TVGSAPLLVGRGNLILRVFEDFNR-WKKNLNLKGFPNAFQDYFNEMALQT--HQCERVT- 710
+ G +++ G I R ++R WK ++ KG+ A D+ ++ L+ C
Sbjct: 673 SKGPEIVMIAHG-AIERTMSVYDRTWKTHVPTKGYTKAMSDHHHDEVLRETGKPCGHFDF 728
BLAST of CmoCh17G001790 vs. ExPASy Swiss-Prot
Match:
Q93XX2 (Protein SIEVE ELEMENT OCCLUSION A OS=Arabidopsis thaliana OX=3702 GN=SEOA PE=1 SV=1)
HSP 1 Score: 182.2 bits (461), Expect = 2.1e-44
Identity = 179/732 (24.45%), Postives = 307/732 (41.94%), Query Frame = 0
Query: 49 HRDELSLKNLSDEVVAGHIYSKHRDDDTVKIDVNNYISFLESIF-AHVDQIHESSFQGHD 108
HR+ + +LSD+ V K D + DV + +S + IF +HV I S+
Sbjct: 127 HRNGRPMFSLSDDRVMADRVLKTHSPDMIFFDVTSLLSVVNDIFKSHVPSIDSSA---PK 186
Query: 109 GHVAFSEDSYKANVTIDPPLDILQTISIKLAFK-------------GPGTEKAHQTTLEI 168
+ F + Y + + + D++ IS ++ K G + + TT +
Sbjct: 187 PSLVFKD--YADHTSFETFADLIDQISCEIDCKCLHGGESHGMMTSGLHLDSRNTTTFSV 246
Query: 169 LDILMSYPWEAKAILCLVAFGSDYGHLWHLNHHSHIDPLAKTLANIHQSASLKKHLDSFK 228
L ++ Y W+AK +L L A YG + LA H + L K L K
Sbjct: 247 LSLVSKYRWDAKLVLVLSALAVKYG-------------VFLLLAETHATNQLTKSLALIK 306
Query: 229 YRQVVFSSRSLIFLCLQVIKLMNQIRL---FSKFDTKEIPE---LASALRQIPLFTYWVI 288
+FS ++ + L +++ Q + + D ++P A+ IP YW++
Sbjct: 307 QLPSIFSRQNALHQRLDKTRILMQDMVDLTTTIIDIYQLPPNHITAAFTDHIPTAVYWIV 366
Query: 289 HTIVASTAEISSYLTNTEGQSQIY-----LNELNERLNAILNILGDYL---------NIF 348
++ + IS + Q + ++E +ERL I L + I
Sbjct: 367 RCVLICVSHISGASGFKQDQIMSFMEVSEIHENSERLRKINAYLLEQFKKSKMTIEEGII 426
Query: 349 QEQLGEINLFRWLIDHIDLYPTEITLV--VSKLLEGKVNAKPLINCSTLMEEKIEDALRE 408
+E+ E+ I H+D+ P + L+ + L G +K + + L +
Sbjct: 427 EEEYQELIQTFTTIIHVDVVPPLLRLLRPIDFLYHGAGVSKRRVGI---------NVLTQ 486
Query: 409 KNVILLISGLEISNDDIRALNLMYDELKREDNYKIVWIPMINSQDF-DEETRKRYELVRS 468
K+V+LLIS LE ++ L +Y E ++ +++I+W+P+ QDF E ++E +
Sbjct: 487 KHVLLLISDLENIEKELYILESLYTEAWQQ-SFEILWVPV---QDFWTEADDAKFEALHM 546
Query: 469 TMKWYAVQYTTKI--AGLRFLEEIWQVREDALMVVLDSKSKVKFSNAIHLLRVWGNNAIP 528
M+WY + K+ A +RF+ E W + ++V LD K +V +NA ++ +W A P
Sbjct: 547 NMRWYVLGEPRKLRRAAIRFVREWWGFKNRPILVALDPKGQVMSTNAFPMVWIWQPFAHP 606
Query: 529 FTVERANAL-LRKNWPESTIVKFINQPRLQSWIDQERSIIFYGGKDQNWIQRFEEKVVDI 588
FT R L + W ++ + L +D + I YGG+D WI+ F ++
Sbjct: 607 FTTARERDLWSEQEWNLEFLIDGTDPHSLNQLVD-GKYICLYGGEDMQWIKNFTSLWRNV 666
Query: 589 KNDRSMRDAGINFEIVPVG------------NNIDNNNASF-------MSRFWITQWGFF 648
+ A I E+V VG N I N S + FW +
Sbjct: 667 -----AKAANIQLEMVYVGKRNPKNGIQPIINTIREENLSHTLPDLFQIWFFWTRVESMW 726
Query: 649 VVKSQLTGSSASETTE------------DILRLISYENE-NGWAILTVGSAPLLVGRGNL 708
K ++ + + E +++ ++ Y E +GW +++ S ++ +GNL
Sbjct: 727 ESKQRMLKAHGIKGREGFKEEEKDLVLQEVVAMLGYGGEGDGWGLVSKASDMMVRAKGNL 786
BLAST of CmoCh17G001790 vs. ExPASy Swiss-Prot
Match:
Q9FXE2 (Protein SIEVE ELEMENT OCCLUSION C OS=Arabidopsis thaliana OX=3702 GN=SEOC PE=4 SV=2)
HSP 1 Score: 106.3 bits (264), Expect = 1.5e-21
Identity = 130/608 (21.38%), Postives = 251/608 (41.28%), Query Frame = 0
Query: 133 ISIKLAFKGPGTEKAHQTTLEILDILMSYPWEAKAILCLVAFGSDYGHLWHLNHHSHIDP 192
IS+++ G + + T+ + D+L Y W+AKA+L L + YG L H + DP
Sbjct: 80 ISVQMLCPCTGENEIRKRTMVLFDLLKEYRWDAKAVLVLGVLAATYGGLLLPVHLAICDP 139
Query: 193 LAKTLANIHQSASLKKHLDSFKYRQVVFSSRSLIFLCLQVIKLMNQIRLFSKFDTKEIP- 252
+A ++A ++Q ++ K+R + S LI + V K I F K K+
Sbjct: 140 VAASIAKLNQLP-----IERTKFRPWLESLNLLIKAMVDVTKC---IIKFEKIPFKQAKL 199
Query: 253 ---ELASALRQIPLFTYWVIHTIVASTAEISSYLTNTEG------------QSQIYLNEL 312
L L I L TY V+ + + +I + + +S+ EL
Sbjct: 200 DNNILGETLSNIYLTTYRVVKSALTCMQQIPYFKQTQQAKKSRKTAAELSIESRRAAGEL 259
Query: 313 NERLNAILNI-------LGDYLNIFQEQLGEINLFRWLIDHIDLYPTEITLVVSKLLEGK 372
+ +LNI + D +E++ + + +I++ + V LL
Sbjct: 260 SSLGYQLLNIHTRLNKQVEDCSTQIEEEINQ------RLRNINIETHQDNQDVLHLLFSL 319
Query: 373 VNAKPLINCSTLMEEKIEDALREKNVILLISGLEISNDDIRALNLMYD---ELKREDNYK 432
+ PL S + +++K +LL+S + L +YD E NY+
Sbjct: 320 QDDLPLQQYSRQIS---ITEVQDKVTLLLLSKPPV-EPLFFLLQQLYDHPSNTNTEQNYE 379
Query: 433 IVWIPMINSQDFDEETRKRYELVRSTMKWYAVQYTTKIAG--LRFLEEIWQVRE-DALMV 492
I+W+P+ +SQ + +E ++ ++ +++ W +V+ ++ L F ++ W ++ +A++V
Sbjct: 380 IIWVPIPSSQKWTDEEKEIFDFYSNSLPWISVRQPWLMSSTILNFFKQEWHYKDNEAMLV 439
Query: 493 VLDSKSKVKFSNAIHLLRVWGNNAIPFTVERANALLRKN-WPESTIVKFINQPRLQSWID 552
V+DS + NA+ ++ +WG A PF+V R + L +++ W + ++ I+ P +
Sbjct: 440 VIDSNGRFVNMNAMDMVLIWGVKAYPFSVSREDELWKEHGWSINLLLDGIH-PTFEG--- 499
Query: 553 QERSIIFYGGKDQNWIQRFEEKVVDIKNDRSMRDAGINFEIVPVGNNIDNNNA------- 612
R I +G ++ +WI F + R +++ G E++ + N + A
Sbjct: 500 --REICIFGSENLDWIDEF------VSLARKIQNLGFQLELIYLSNQRRDERAMEESSIL 559
Query: 613 ---SFMSRFWITQWGFFVVKSQ---LTGSSASETTEDILRLI--SYENENGWAILTVGSA 672
+ FW+ K + + S E++ L+ Y GW I+ GS
Sbjct: 560 FSPTLQQLFWLRLESIERSKLKRIVIEPSKPDRVFEEVRNLLDFDYGKHRGWGIIGNGST 619
Query: 673 PLLVGRGNLILRVFEDFNRWKKNLNLKGFPNAFQDYFNEMALQTHQCERVTLPGFSGWIP 696
V G + RW + GF A + + +H +P
Sbjct: 620 AETVD-GEKMTERMRKIVRWGEYAKGLGFTEAIEIAAEKPCELSH---TAVVPFEEALTM 653
BLAST of CmoCh17G001790 vs. ExPASy TrEMBL
Match:
A0A6J1H6C7 (protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita moschata OX=3662 GN=LOC111460431 PE=4 SV=1)
HSP 1 Score: 1389.0 bits (3594), Expect = 0.0e+00
Identity = 687/687 (100.00%), Postives = 687/687 (100.00%), Query Frame = 0
Query: 29 MSVLAPKIPSTPMANPRLQTHRDELSLKNLSDEVVAGHIYSKHRDDDTVKIDVNNYISFL 88
MSVLAPKIPSTPMANPRLQTHRDELSLKNLSDEVVAGHIYSKHRDDDTVKIDVNNYISFL
Sbjct: 1 MSVLAPKIPSTPMANPRLQTHRDELSLKNLSDEVVAGHIYSKHRDDDTVKIDVNNYISFL 60
Query: 89 ESIFAHVDQIHESSFQGHDGHVAFSEDSYKANVTIDPPLDILQTISIKLAFKGPGTEKAH 148
ESIFAHVDQIHESSFQGHDGHVAFSEDSYKANVTIDPPLDILQTISIKLAFKGPGTEKAH
Sbjct: 61 ESIFAHVDQIHESSFQGHDGHVAFSEDSYKANVTIDPPLDILQTISIKLAFKGPGTEKAH 120
Query: 149 QTTLEILDILMSYPWEAKAILCLVAFGSDYGHLWHLNHHSHIDPLAKTLANIHQSASLKK 208
QTTLEILDILMSYPWEAKAILCLVAFGSDYGHLWHLNHHSHIDPLAKTLANIHQSASLKK
Sbjct: 121 QTTLEILDILMSYPWEAKAILCLVAFGSDYGHLWHLNHHSHIDPLAKTLANIHQSASLKK 180
Query: 209 HLDSFKYRQVVFSSRSLIFLCLQVIKLMNQIRLFSKFDTKEIPELASALRQIPLFTYWVI 268
HLDSFKYRQVVFSSRSLIFLCLQVIKLMNQIRLFSKFDTKEIPELASALRQIPLFTYWVI
Sbjct: 181 HLDSFKYRQVVFSSRSLIFLCLQVIKLMNQIRLFSKFDTKEIPELASALRQIPLFTYWVI 240
Query: 269 HTIVASTAEISSYLTNTEGQSQIYLNELNERLNAILNILGDYLNIFQEQLGEINLFRWLI 328
HTIVASTAEISSYLTNTEGQSQIYLNELNERLNAILNILGDYLNIFQEQLGEINLFRWLI
Sbjct: 241 HTIVASTAEISSYLTNTEGQSQIYLNELNERLNAILNILGDYLNIFQEQLGEINLFRWLI 300
Query: 329 DHIDLYPTEITLVVSKLLEGKVNAKPLINCSTLMEEKIEDALREKNVILLISGLEISNDD 388
DHIDLYPTEITLVVSKLLEGKVNAKPLINCSTLMEEKIEDALREKNVILLISGLEISNDD
Sbjct: 301 DHIDLYPTEITLVVSKLLEGKVNAKPLINCSTLMEEKIEDALREKNVILLISGLEISNDD 360
Query: 389 IRALNLMYDELKREDNYKIVWIPMINSQDFDEETRKRYELVRSTMKWYAVQYTTKIAGLR 448
IRALNLMYDELKREDNYKIVWIPMINSQDFDEETRKRYELVRSTMKWYAVQYTTKIAGLR
Sbjct: 361 IRALNLMYDELKREDNYKIVWIPMINSQDFDEETRKRYELVRSTMKWYAVQYTTKIAGLR 420
Query: 449 FLEEIWQVREDALMVVLDSKSKVKFSNAIHLLRVWGNNAIPFTVERANALLRKNWPESTI 508
FLEEIWQVREDALMVVLDSKSKVKFSNAIHLLRVWGNNAIPFTVERANALLRKNWPESTI
Sbjct: 421 FLEEIWQVREDALMVVLDSKSKVKFSNAIHLLRVWGNNAIPFTVERANALLRKNWPESTI 480
Query: 509 VKFINQPRLQSWIDQERSIIFYGGKDQNWIQRFEEKVVDIKNDRSMRDAGINFEIVPVGN 568
VKFINQPRLQSWIDQERSIIFYGGKDQNWIQRFEEKVVDIKNDRSMRDAGINFEIVPVGN
Sbjct: 481 VKFINQPRLQSWIDQERSIIFYGGKDQNWIQRFEEKVVDIKNDRSMRDAGINFEIVPVGN 540
Query: 569 NIDNNNASFMSRFWITQWGFFVVKSQLTGSSASETTEDILRLISYENENGWAILTVGSAP 628
NIDNNNASFMSRFWITQWGFFVVKSQLTGSSASETTEDILRLISYENENGWAILTVGSAP
Sbjct: 541 NIDNNNASFMSRFWITQWGFFVVKSQLTGSSASETTEDILRLISYENENGWAILTVGSAP 600
Query: 629 LLVGRGNLILRVFEDFNRWKKNLNLKGFPNAFQDYFNEMALQTHQCERVTLPGFSGWIPM 688
LLVGRGNLILRVFEDFNRWKKNLNLKGFPNAFQDYFNEMALQTHQCERVTLPGFSGWIPM
Sbjct: 601 LLVGRGNLILRVFEDFNRWKKNLNLKGFPNAFQDYFNEMALQTHQCERVTLPGFSGWIPM 660
Query: 689 IVNCPECPRFMETGINFNCCHGRNPNN 716
IVNCPECPRFMETGINFNCCHGRNPNN
Sbjct: 661 IVNCPECPRFMETGINFNCCHGRNPNN 687
BLAST of CmoCh17G001790 vs. ExPASy TrEMBL
Match:
A0A6J1L0W4 (protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita maxima OX=3661 GN=LOC111499363 PE=4 SV=1)
HSP 1 Score: 1327.0 bits (3433), Expect = 0.0e+00
Identity = 654/687 (95.20%), Postives = 671/687 (97.67%), Query Frame = 0
Query: 29 MSVLAPKIPSTPMANPRLQTHRDELSLKNLSDEVVAGHIYSKHRDDDTVKIDVNNYISFL 88
MSVLAPKIPSTPMANPRLQTH+DELSLKNLSD+VV GHIYSKHRDDDTVKIDVNNYISFL
Sbjct: 1 MSVLAPKIPSTPMANPRLQTHKDELSLKNLSDDVVVGHIYSKHRDDDTVKIDVNNYISFL 60
Query: 89 ESIFAHVDQIHESSFQGHDGHVAFSEDSYKANVTIDPPLDILQTISIKLAFKGPGTEKAH 148
+SIFA+VDQIHE+SFQGHDG V +SEDSYKANVTIDPPLDILQ ISIKLAFKGPG E AH
Sbjct: 61 QSIFAYVDQIHEASFQGHDGRVIYSEDSYKANVTIDPPLDILQKISIKLAFKGPGIENAH 120
Query: 149 QTTLEILDILMSYPWEAKAILCLVAFGSDYGHLWHLNHHSHIDPLAKTLANIHQSASLKK 208
QTTLEILDIL SYPWEAKAILCLVAFGSDYGHLWHLNHHSH D LAKTLANIHQSASLKK
Sbjct: 121 QTTLEILDILTSYPWEAKAILCLVAFGSDYGHLWHLNHHSHFDSLAKTLANIHQSASLKK 180
Query: 209 HLDSFKYRQVVFSSRSLIFLCLQVIKLMNQIRLFSKFDTKEIPELASALRQIPLFTYWVI 268
HLDSFKYRQVVFSSRSLIFLCLQVIKLMNQIRLFSKFDTKEIPELASALRQIPLFTYWVI
Sbjct: 181 HLDSFKYRQVVFSSRSLIFLCLQVIKLMNQIRLFSKFDTKEIPELASALRQIPLFTYWVI 240
Query: 269 HTIVASTAEISSYLTNTEGQSQIYLNELNERLNAILNILGDYLNIFQEQLGEINLFRWLI 328
HTIVASTAEISSYLTNTE QSQIYLNELNERLNAILNILGDYLNIFQEQLGEINLFRWLI
Sbjct: 241 HTIVASTAEISSYLTNTESQSQIYLNELNERLNAILNILGDYLNIFQEQLGEINLFRWLI 300
Query: 329 DHIDLYPTEITLVVSKLLEGKVNAKPLINCSTLMEEKIEDALREKNVILLISGLEISNDD 388
DHIDL+PTEITLVVSKLLEGKVNAKPLINCSTLMEEKIEDAL EKNVILLISGLEISNDD
Sbjct: 301 DHIDLFPTEITLVVSKLLEGKVNAKPLINCSTLMEEKIEDALSEKNVILLISGLEISNDD 360
Query: 389 IRALNLMYDELKREDNYKIVWIPMINSQDFDEETRKRYELVRSTMKWYAVQYTTKIAGLR 448
I+ALNL+YDELKREDNYKIVWIPMINSQ FD+E+RKRYELVRSTMKWYAVQYTTKIAGLR
Sbjct: 361 IQALNLLYDELKREDNYKIVWIPMINSQGFDQESRKRYELVRSTMKWYAVQYTTKIAGLR 420
Query: 449 FLEEIWQVREDALMVVLDSKSKVKFSNAIHLLRVWGNNAIPFTVERANALLRKNWPESTI 508
FLEEIWQVREDALMVVLDSKSKVKFSNAIHLLRVWGNNAIPFTVERANALLRKNWPESTI
Sbjct: 421 FLEEIWQVREDALMVVLDSKSKVKFSNAIHLLRVWGNNAIPFTVERANALLRKNWPESTI 480
Query: 509 VKFINQPRLQSWIDQERSIIFYGGKDQNWIQRFEEKVVDIKNDRSMRDAGINFEIVPVGN 568
VKFINQPRLQSWIDQ RSIIFYGGKDQ+WIQ FEEKVVDIKNDRSMR++GINFEIV +GN
Sbjct: 481 VKFINQPRLQSWIDQGRSIIFYGGKDQDWIQGFEEKVVDIKNDRSMRESGINFEIVRIGN 540
Query: 569 NIDNNNASFMSRFWITQWGFFVVKSQLTGSSASETTEDILRLISYENENGWAILTVGSAP 628
N DNNNASFMSRFWITQWGFFVVKSQLTGSSASETTEDILRLISYENENGWAILTVGSAP
Sbjct: 541 NNDNNNASFMSRFWITQWGFFVVKSQLTGSSASETTEDILRLISYENENGWAILTVGSAP 600
Query: 629 LLVGRGNLILRVFEDFNRWKKNLNLKGFPNAFQDYFNEMALQTHQCERVTLPGFSGWIPM 688
LLVGRGNLILRVFEDFNRWKKNLNLKGFPNAFQDYFNEMAL+THQCERVTLPGFSGWIPM
Sbjct: 601 LLVGRGNLILRVFEDFNRWKKNLNLKGFPNAFQDYFNEMALETHQCERVTLPGFSGWIPM 660
Query: 689 IVNCPECPRFMETGINFNCCHGRNPNN 716
IVNCPECPRFMETGINFNCCHGRNPN+
Sbjct: 661 IVNCPECPRFMETGINFNCCHGRNPNS 687
BLAST of CmoCh17G001790 vs. ExPASy TrEMBL
Match:
A0A5A7UVD0 (Protein SIEVE ELEMENT OCCLUSION B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001850 PE=4 SV=1)
HSP 1 Score: 1171.0 bits (3028), Expect = 0.0e+00
Identity = 573/708 (80.93%), Postives = 641/708 (90.54%), Query Frame = 0
Query: 13 LPPSDKI--SNLLAFHKTMSVLAPKIPSTPMANPRLQTHRDELSLKNLSDEVVAGHIYSK 72
+P +D + ++LLAFH M+VLAPK PSTP+ +PRLQTH+++LSLKNLSDE VAGHIYSK
Sbjct: 51 VPSADYLEGTDLLAFHNNMAVLAPKKPSTPIIHPRLQTHKEDLSLKNLSDEAVAGHIYSK 110
Query: 73 HRDDDTVKIDVNNYISFLESIFAHVDQIHESSFQGHDGHVAFSEDSYKANV-TIDPPLDI 132
HRDDDT+KIDV+NYISFL+S+F+++ QI+E+S QGH+G V +SED YK+NV TIDPP+DI
Sbjct: 111 HRDDDTIKIDVDNYISFLQSVFSNIQQINEASSQGHEGRVIYSEDPYKSNVTTIDPPVDI 170
Query: 133 LQTISIKLAFKGPGTEKAHQTTLEILDILMSYPWEAKAILCLVAFGSDYGHLWHLNHHSH 192
LQ +SIKLAFK PG EKAHQTTLEILD+L+ YPWEAKAILCL AFGSDYG LWHLNHHS
Sbjct: 171 LQKVSIKLAFKSPGIEKAHQTTLEILDVLIMYPWEAKAILCLAAFGSDYGLLWHLNHHSL 230
Query: 193 IDPLAKTLANIHQSASLKKHLDSFKYRQVVFSSRSLIFLCLQVIKLMNQIRLFSKFDTKE 252
DPLAK+LANIH S SLKKHLDSF YRQVVFSSRSLI+LC ++IKLMNQIRLFSK+D+KE
Sbjct: 231 FDPLAKSLANIHHSTSLKKHLDSFSYRQVVFSSRSLIYLCFEIIKLMNQIRLFSKYDSKE 290
Query: 253 IPELASALRQIPLFTYWVIHTIVASTAEISSYLTNTEGQSQIYLNELNERLNAILNILGD 312
IPELASALRQIPLFTYWVIH IVAS+ EISSYL +TE QS YLNELNERLNAILN LGD
Sbjct: 291 IPELASALRQIPLFTYWVIHAIVASSTEISSYLADTENQSPTYLNELNERLNAILNTLGD 350
Query: 313 YLNIFQEQLGEINLFRWLIDHIDLYPTEITLVVSKLLEGKVNAKPLINCSTLMEEKIEDA 372
+LNIF+EQL EINL+RWLIDHID +PTEITLVVSKLLEGK NAKPLINCST EE+IEDA
Sbjct: 351 FLNIFREQLEEINLYRWLIDHIDQFPTEITLVVSKLLEGKANAKPLINCSTFNEERIEDA 410
Query: 373 LREKNVILLI-SGLEISNDDIRALNLMYDELKREDNYKIVWIPMINSQDFDEETRKRYEL 432
LREKNVILLI SGL ISNDD+RALNL+Y+ELKREDNYKIVWIP++NSQ FDEE+ KRYE
Sbjct: 411 LREKNVILLISSGLSISNDDVRALNLVYEELKREDNYKIVWIPVMNSQAFDEESHKRYEY 470
Query: 433 VRSTMKWYAVQYTTKIAGLRFLEEIWQVREDALMVVLDSKSKVKFSNAIHLLRVWGNNAI 492
+RSTMKWYAVQY TKIAGLRFLEEIWQ+R+DALMVVLDSKSK+KFSNAIHLLRVWGNNAI
Sbjct: 471 LRSTMKWYAVQYGTKIAGLRFLEEIWQLRDDALMVVLDSKSKLKFSNAIHLLRVWGNNAI 530
Query: 493 PFTVERANALLRKNWPESTIVKFINQPRLQSWIDQERSIIFYGGKDQNWIQRFEEKVVDI 552
PFT+ERANALLRKNWPESTIVKF NQPRLQSWIDQ ++I+FYGGKD +WIQ+FEEKVVDI
Sbjct: 531 PFTLERANALLRKNWPESTIVKFTNQPRLQSWIDQGKTILFYGGKDIDWIQKFEEKVVDI 590
Query: 553 KNDRSMRDAGINFEIVPVGNN----IDNNNASFMSRFWITQWGFFVVKSQLTGSSASETT 612
KNDRSMRD GI FEIVPVG N +N S MSRFWITQWGFF++KSQLTGSSASETT
Sbjct: 591 KNDRSMRDNGITFEIVPVGINKTTTKGEDNNSNMSRFWITQWGFFIIKSQLTGSSASETT 650
Query: 613 EDILRLISYENENGWAILTVGSAPLLVGRGNLILRVFEDFNRWKKNLNLKGFPNAFQDYF 672
EDILRLISYENENGWAIL VGSAPL+V RGNL+L VFED N WKKNLNLKGFPN+F+DYF
Sbjct: 651 EDILRLISYENENGWAILAVGSAPLVVARGNLVLGVFEDLNAWKKNLNLKGFPNSFKDYF 710
Query: 673 NEMALQTHQCERVTLPGFSGWIPMIVNCPECPRFMETGINFNCCHGRN 713
+E+A +THQCE+V LPGFSGWIPMIVNCPECPRFMETGINFNCCHGR+
Sbjct: 711 DELASRTHQCEKVILPGFSGWIPMIVNCPECPRFMETGINFNCCHGRD 758
BLAST of CmoCh17G001790 vs. ExPASy TrEMBL
Match:
A0A1S3CNP9 (protein SIEVE ELEMENT OCCLUSION B-like OS=Cucumis melo OX=3656 GN=LOC103502849 PE=4 SV=1)
HSP 1 Score: 1160.2 bits (3000), Expect = 0.0e+00
Identity = 566/690 (82.03%), Postives = 629/690 (91.16%), Query Frame = 0
Query: 29 MSVLAPKIPSTPMANPRLQTHRDELSLKNLSDEVVAGHIYSKHRDDDTVKIDVNNYISFL 88
M+VLAPK PSTP+ +PRLQTH+++LSLKNLSDE VAGHIYSKHRDDDT+KIDV+NYISFL
Sbjct: 1 MAVLAPKKPSTPIIHPRLQTHKEDLSLKNLSDEAVAGHIYSKHRDDDTIKIDVDNYISFL 60
Query: 89 ESIFAHVDQIHESSFQGHDGHVAFSEDSYKANV-TIDPPLDILQTISIKLAFKGPGTEKA 148
+S+F+++ QI+E+S QGH+G V +SED YK+NV TIDPP+DILQ +SIKLAFK PG EKA
Sbjct: 61 QSVFSNIQQINEASSQGHEGRVIYSEDPYKSNVTTIDPPVDILQKVSIKLAFKSPGIEKA 120
Query: 149 HQTTLEILDILMSYPWEAKAILCLVAFGSDYGHLWHLNHHSHIDPLAKTLANIHQSASLK 208
HQTTLEILD+L+ YPWEAKAILCL AFGSDYG LWHLNHHS DPLAK+LANIH S SLK
Sbjct: 121 HQTTLEILDVLIMYPWEAKAILCLAAFGSDYGLLWHLNHHSLFDPLAKSLANIHHSTSLK 180
Query: 209 KHLDSFKYRQVVFSSRSLIFLCLQVIKLMNQIRLFSKFDTKEIPELASALRQIPLFTYWV 268
KHLDSF YRQVVFSSRSLI+LC ++IKLMNQIRLFSK+D+KEIPELASALRQIPLFTYWV
Sbjct: 181 KHLDSFSYRQVVFSSRSLIYLCFEIIKLMNQIRLFSKYDSKEIPELASALRQIPLFTYWV 240
Query: 269 IHTIVASTAEISSYLTNTEGQSQIYLNELNERLNAILNILGDYLNIFQEQLGEINLFRWL 328
IH IVAS+ EISSYL +TE QS YLNELNERLNAILN LGD+LNIF+EQL EINL+RWL
Sbjct: 241 IHAIVASSTEISSYLADTENQSPTYLNELNERLNAILNTLGDFLNIFREQLEEINLYRWL 300
Query: 329 IDHIDLYPTEITLVVSKLLEGKVNAKPLINCSTLMEEKIEDALREKNVILLI-SGLEISN 388
IDHID +PTEITLVVSKLLEGK NAKPLINCST EE+IEDALREKNVILLI SGL ISN
Sbjct: 301 IDHIDQFPTEITLVVSKLLEGKANAKPLINCSTFNEERIEDALREKNVILLISSGLSISN 360
Query: 389 DDIRALNLMYDELKREDNYKIVWIPMINSQDFDEETRKRYELVRSTMKWYAVQYTTKIAG 448
DD+RALNL+Y+ELKREDNYKIVWIP++NSQ FDEE+ KRYE +RSTMKWYAVQY TKIAG
Sbjct: 361 DDVRALNLVYEELKREDNYKIVWIPVMNSQAFDEESHKRYEYLRSTMKWYAVQYGTKIAG 420
Query: 449 LRFLEEIWQVREDALMVVLDSKSKVKFSNAIHLLRVWGNNAIPFTVERANALLRKNWPES 508
LRFLEEIWQ+R+DALMVVLDSKSK+KFSNAIHLLRVWGNNAIPFT+ERANALLRKNWPES
Sbjct: 421 LRFLEEIWQLRDDALMVVLDSKSKLKFSNAIHLLRVWGNNAIPFTLERANALLRKNWPES 480
Query: 509 TIVKFINQPRLQSWIDQERSIIFYGGKDQNWIQRFEEKVVDIKNDRSMRDAGINFEIVPV 568
TIVKF NQPRLQSWIDQ ++I+FYGGKD +WIQ+FEEKVVDIKNDRSMRD GI FEIVPV
Sbjct: 481 TIVKFTNQPRLQSWIDQGKTILFYGGKDIDWIQKFEEKVVDIKNDRSMRDNGITFEIVPV 540
Query: 569 GNN----IDNNNASFMSRFWITQWGFFVVKSQLTGSSASETTEDILRLISYENENGWAIL 628
G N +N S MSRFWITQWGFF++KSQLTGSSASETTEDILRLISYENENGWAIL
Sbjct: 541 GINKTTTKGEDNNSNMSRFWITQWGFFIIKSQLTGSSASETTEDILRLISYENENGWAIL 600
Query: 629 TVGSAPLLVGRGNLILRVFEDFNRWKKNLNLKGFPNAFQDYFNEMALQTHQCERVTLPGF 688
VGSAPL+V RGNL+L VFED N WKKNLNLKGFPN+F+DYF+E+A +THQCE+V LPGF
Sbjct: 601 AVGSAPLVVARGNLVLGVFEDLNAWKKNLNLKGFPNSFKDYFDELASRTHQCEKVILPGF 660
Query: 689 SGWIPMIVNCPECPRFMETGINFNCCHGRN 713
SGWIPMIVNCPECPRFMETGINFNCCHGR+
Sbjct: 661 SGWIPMIVNCPECPRFMETGINFNCCHGRD 690
BLAST of CmoCh17G001790 vs. ExPASy TrEMBL
Match:
A0A0A0LNR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G194880 PE=4 SV=1)
HSP 1 Score: 1156.4 bits (2990), Expect = 0.0e+00
Identity = 566/694 (81.56%), Postives = 633/694 (91.21%), Query Frame = 0
Query: 29 MSVLAPKIPSTPMANPRLQTHRDELSLKNLSDEVVAGHIYSKHRDDDTVKIDVNNYISFL 88
M++LAPK PSTP+ +PRLQTH+++LSLKNLSDE VAGHIYSKHRDDDT+KIDV+NYISFL
Sbjct: 1 MAILAPKKPSTPITHPRLQTHKEDLSLKNLSDEAVAGHIYSKHRDDDTIKIDVDNYISFL 60
Query: 89 ESIFAHVDQIHESSFQGHDGHVAFSEDSYKANV-TIDPPLDILQTISIKLAFKGPGTEKA 148
+S+F++V QI+E+S QGH+G V +SE+SYK+NV TIDPP DIL+ +SIKLAFK PG EKA
Sbjct: 61 QSLFSNVQQINEASSQGHEGRVIYSENSYKSNVTTIDPPADILKKVSIKLAFKSPGIEKA 120
Query: 149 HQTTLEILDILMSYPWEAKAILCLVAFGSDYGHLWHLNHHSHIDPLAKTLANIHQSASLK 208
HQTTLEILDIL+SYPWEAKAILCL AFGSDYG LWHLNHHS DPLAK+LANIH S SLK
Sbjct: 121 HQTTLEILDILVSYPWEAKAILCLAAFGSDYGLLWHLNHHSLFDPLAKSLANIHHSTSLK 180
Query: 209 KHLDSFKYRQVVFSSRSLIFLCLQVIKLMNQIRLFSKFDTKEIPELASALRQIPLFTYWV 268
KHLDSF YRQV+FSSRSLI+LC ++IKLMNQIRLFSK+D+KEIPELASALRQIPLF+YWV
Sbjct: 181 KHLDSFSYRQVIFSSRSLIYLCFEIIKLMNQIRLFSKYDSKEIPELASALRQIPLFSYWV 240
Query: 269 IHTIVASTAEISSYLTNTEGQSQIYLNELNERLNAILNILGDYLNIFQEQLGEINLFRWL 328
IHTIVAS+ EISSYL NTE QS YLNELNERLNAILN LGD LNIFQEQL EINL+RWL
Sbjct: 241 IHTIVASSTEISSYLANTESQSPTYLNELNERLNAILNTLGDLLNIFQEQLEEINLYRWL 300
Query: 329 IDHIDLYPTEITLVVSKLLEGKVNAKPLINCSTLMEEKIEDALREKNVILLI-SGLEISN 388
IDHID +PTEITLVVSKLLEGK NAKPLINCST EE+IEDALREKNVILLI SGL ISN
Sbjct: 301 IDHIDQFPTEITLVVSKLLEGKPNAKPLINCSTFNEERIEDALREKNVILLISSGLNISN 360
Query: 389 DDIRALNLMYDELKREDNYKIVWIPMINSQDFDEETRKRYELVRSTMKWYAVQYTTKIAG 448
DDIRAL L+Y+ELKREDNYKIVWIP++NS+ F+EE+ KRYE +RSTMKWYAVQY TKIAG
Sbjct: 361 DDIRALKLVYEELKREDNYKIVWIPVMNSEAFNEESHKRYENLRSTMKWYAVQYGTKIAG 420
Query: 449 LRFLEEIWQVREDALMVVLDSKSKVKFSNAIHLLRVWGNNAIPFTVERANALLRKNWPES 508
LRFLEEIWQ+R+DALMVVLDSKSK+KFSNAIHLLRVWGNNAIPFT+ERANALLRKNWPES
Sbjct: 421 LRFLEEIWQLRDDALMVVLDSKSKLKFSNAIHLLRVWGNNAIPFTLERANALLRKNWPES 480
Query: 509 TIVKFINQPRLQSWIDQERSIIFYGGKDQNWIQRFEEKVVDIKNDRSMRDAGINFEIVPV 568
TIVKF NQPRLQSWIDQE++IIFYGGKD +WIQ+FEEKVVDIKNDRSMRD GI FEIV +
Sbjct: 481 TIVKFTNQPRLQSWIDQEKTIIFYGGKDIDWIQKFEEKVVDIKNDRSMRDNGITFEIVHI 540
Query: 569 GNNI-----DNNNASFMSRFWITQWGFFVVKSQLTGSSASETTEDILRLISYENENGWAI 628
G N +++N S M+RFWI+QWGFF++KSQLTGSSASETTEDILRLISYENENGWAI
Sbjct: 541 GINKNTTKGEDDNNSNMARFWISQWGFFIIKSQLTGSSASETTEDILRLISYENENGWAI 600
Query: 629 LTVGSAPLLVGRGNLILRVFEDFNRWKKNLNLKGFPNAFQDYFNEMALQTHQCERVTLPG 688
LTVGSAPL+V RGNL+L VFED N WKKNLNLKGFPN+F+DYF ++AL+THQCE+V LPG
Sbjct: 601 LTVGSAPLVVARGNLVLGVFEDLNAWKKNLNLKGFPNSFKDYFEQLALRTHQCEKVILPG 660
Query: 689 FSGWIPMIVNCPECPRFMETGINFNCCHGRNPNN 716
FSGWIPMIVNCPECPRFMETGINFNCCHGR+ N
Sbjct: 661 FSGWIPMIVNCPECPRFMETGINFNCCHGRDQLN 694
BLAST of CmoCh17G001790 vs. TAIR 10
Match:
AT3G01680.1 (CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 197.2 bits (500), Expect = 4.5e-50
Identity = 185/752 (24.60%), Postives = 320/752 (42.55%), Query Frame = 0
Query: 23 LAFHKTMSVLAPKIPSTPMANPRLQTHRDELSLKNLSDEVVAGHIYSKHRDDDTVKIDVN 82
LA HK + P + P L SDE + + + D ++ V
Sbjct: 13 LAGHKNTTGKTPSMEMIPAT-----------GLAMSSDESMMLKLIQQTHSPDAREVQVR 72
Query: 83 NYISFLESIFAHVDQIHESSFQGHDGHVAF----SEDSYKAN---VTIDPPLDILQTISI 142
+S +E I + ++ D + + +ED + +D + ++
Sbjct: 73 GLLSLVEDI------LDRATLDSEDTNASMLPLPTEDKLMQSSMMSVLDSVSYAIDRVAC 132
Query: 143 KLAFKGPGTEKAHQTTLEILDILMSYPWEAKAILCLVAFGSDYGHLWHLNHHSHIDPLAK 202
++A+K +H+ T+ + + L S+ W+ K +L L AF +YG W L + LAK
Sbjct: 133 EIAYKSLTGSDSHEITMSVFEHLSSFQWDGKLVLTLAAFALNYGEFWLLVQFYSKNQLAK 192
Query: 203 TLANIHQSASLKKHLDSFKYRQVVFSSRSLIFLCLQVIKLMNQI-RLFSKFDTKEIPELA 262
+LA + L + V LI V + ++ L ++ T ++P+L+
Sbjct: 193 SLAML----KLVPVQNRVTLESVSQGLNDLIREMKSVTACVVELSELPDRYITPDVPQLS 252
Query: 263 SALRQIPLFTYWVIHTIVASTAEIS--SYLTNTEGQSQIYLNELNERLNAILNI---LGD 322
L IP+ YW I +++A ++I+ + + + +Q+ L E + N + NI L +
Sbjct: 253 RILSTIPIAVYWTIRSVIACISQINMITAMGHEMMNTQMDLWETSMLANKLKNIHDHLAE 312
Query: 323 YLNIF------QEQLGEINLFRWLID--HIDLYPTEITLVVSKLLEGKVNAKPLIN--CS 382
L + Q + + L D HID K+L V+ KP I
Sbjct: 313 TLRLCYRHIEKQRSSESLKVLHSLFDTTHID---------NMKILTALVHPKPHITPLQD 372
Query: 383 TLMEEKIE-DALREKNVILLISGLEISNDDIRALNLMYDELKR---------EDNYKIVW 442
L + K+ D LR K V+LLIS L I D++ +Y E +R Y++VW
Sbjct: 373 GLTKRKVHLDVLRRKTVLLLISDLNILQDELSIFEQIYTESRRNLVGVDGKSHMPYEVVW 432
Query: 443 IPMINS-QDFDEE--TRKRYELVRSTMKWYAVQYTTKIAG--LRFLEEIWQVREDALMVV 502
+P+++ +DF+ +K++E +R M WY+V I + F+ W ++VV
Sbjct: 433 VPVVDPIEDFERSPILQKKFEDLRDPMPWYSVDSPKLIERHVVEFMRGRWHFMNKPILVV 492
Query: 503 LDSKSKVKFSNAIHLLRVWGNNAIPFTVERANALLRKNWPESTIVKFINQPRLQSWIDQE 562
+D + NA+H++ +WG A PFT R L R+ ++ + +WI +
Sbjct: 493 IDPQGNEASLNALHMIWIWGTEAFPFTRSREEELWRRETFSLNLIVDGIDSVIFNWIKPD 552
Query: 563 RSIIFYGGKDQNWIQRFEEKVVDIKNDRSMRDAGINFEIVPVGNN--------------I 622
I YGG D +WI+RF + + +D+ +N E+ VG I
Sbjct: 553 NYIFLYGGDDLDWIRRF-----TMAAKATAKDSNVNLEMAYVGKRNHSHREQIRRISEVI 612
Query: 623 DNNNAS-------FMSRFWITQWGFFVVKSQL-TGSSASETTEDILRLISYENENGWAIL 682
+ N S M FW K QL + + I +++SY+ GWA+L
Sbjct: 613 RSENLSHSWAEPALMWFFWTRLESMLYSKIQLGKADDHDDVMQGIKKILSYDKLGGWALL 672
Query: 683 TVGSAPLLVGRGNLILRVFEDFNR-WKKNLNLKGFPNAFQDYFNEMALQT--HQCERVT- 710
+ G +++ G I R ++R WK ++ KG+ A D+ ++ L+ C
Sbjct: 673 SKGPEIVMIAHG-AIERTMSVYDRTWKTHVPTKGYTKAMSDHHHDEVLRETGKPCGHFDF 728
BLAST of CmoCh17G001790 vs. TAIR 10
Match:
AT3G01670.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 121 Blast hits to 111 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 182.2 bits (461), Expect = 1.5e-45
Identity = 179/732 (24.45%), Postives = 307/732 (41.94%), Query Frame = 0
Query: 49 HRDELSLKNLSDEVVAGHIYSKHRDDDTVKIDVNNYISFLESIF-AHVDQIHESSFQGHD 108
HR+ + +LSD+ V K D + DV + +S + IF +HV I S+
Sbjct: 127 HRNGRPMFSLSDDRVMADRVLKTHSPDMIFFDVTSLLSVVNDIFKSHVPSIDSSA---PK 186
Query: 109 GHVAFSEDSYKANVTIDPPLDILQTISIKLAFK-------------GPGTEKAHQTTLEI 168
+ F + Y + + + D++ IS ++ K G + + TT +
Sbjct: 187 PSLVFKD--YADHTSFETFADLIDQISCEIDCKCLHGGESHGMMTSGLHLDSRNTTTFSV 246
Query: 169 LDILMSYPWEAKAILCLVAFGSDYGHLWHLNHHSHIDPLAKTLANIHQSASLKKHLDSFK 228
L ++ Y W+AK +L L A YG + LA H + L K L K
Sbjct: 247 LSLVSKYRWDAKLVLVLSALAVKYG-------------VFLLLAETHATNQLTKSLALIK 306
Query: 229 YRQVVFSSRSLIFLCLQVIKLMNQIRL---FSKFDTKEIPE---LASALRQIPLFTYWVI 288
+FS ++ + L +++ Q + + D ++P A+ IP YW++
Sbjct: 307 QLPSIFSRQNALHQRLDKTRILMQDMVDLTTTIIDIYQLPPNHITAAFTDHIPTAVYWIV 366
Query: 289 HTIVASTAEISSYLTNTEGQSQIY-----LNELNERLNAILNILGDYL---------NIF 348
++ + IS + Q + ++E +ERL I L + I
Sbjct: 367 RCVLICVSHISGASGFKQDQIMSFMEVSEIHENSERLRKINAYLLEQFKKSKMTIEEGII 426
Query: 349 QEQLGEINLFRWLIDHIDLYPTEITLV--VSKLLEGKVNAKPLINCSTLMEEKIEDALRE 408
+E+ E+ I H+D+ P + L+ + L G +K + + L +
Sbjct: 427 EEEYQELIQTFTTIIHVDVVPPLLRLLRPIDFLYHGAGVSKRRVGI---------NVLTQ 486
Query: 409 KNVILLISGLEISNDDIRALNLMYDELKREDNYKIVWIPMINSQDF-DEETRKRYELVRS 468
K+V+LLIS LE ++ L +Y E ++ +++I+W+P+ QDF E ++E +
Sbjct: 487 KHVLLLISDLENIEKELYILESLYTEAWQQ-SFEILWVPV---QDFWTEADDAKFEALHM 546
Query: 469 TMKWYAVQYTTKI--AGLRFLEEIWQVREDALMVVLDSKSKVKFSNAIHLLRVWGNNAIP 528
M+WY + K+ A +RF+ E W + ++V LD K +V +NA ++ +W A P
Sbjct: 547 NMRWYVLGEPRKLRRAAIRFVREWWGFKNRPILVALDPKGQVMSTNAFPMVWIWQPFAHP 606
Query: 529 FTVERANAL-LRKNWPESTIVKFINQPRLQSWIDQERSIIFYGGKDQNWIQRFEEKVVDI 588
FT R L + W ++ + L +D + I YGG+D WI+ F ++
Sbjct: 607 FTTARERDLWSEQEWNLEFLIDGTDPHSLNQLVD-GKYICLYGGEDMQWIKNFTSLWRNV 666
Query: 589 KNDRSMRDAGINFEIVPVG------------NNIDNNNASF-------MSRFWITQWGFF 648
+ A I E+V VG N I N S + FW +
Sbjct: 667 -----AKAANIQLEMVYVGKRNPKNGIQPIINTIREENLSHTLPDLFQIWFFWTRVESMW 726
Query: 649 VVKSQLTGSSASETTE------------DILRLISYENE-NGWAILTVGSAPLLVGRGNL 708
K ++ + + E +++ ++ Y E +GW +++ S ++ +GNL
Sbjct: 727 ESKQRMLKAHGIKGREGFKEEEKDLVLQEVVAMLGYGGEGDGWGLVSKASDMMVRAKGNL 786
BLAST of CmoCh17G001790 vs. TAIR 10
Match:
AT1G67790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 208 Blast hits to 125 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 98.6 bits (244), Expect = 2.2e-20
Identity = 121/586 (20.65%), Postives = 228/586 (38.91%), Query Frame = 0
Query: 133 ISIKLAFKGPGTEKAHQTTLEILDILMSYPWEAKAILCLVAFGSDYGHLWHLNHHSHIDP 192
IS+++ G + + T+ + D+L Y W+AKA+L L + YG L H + DP
Sbjct: 80 ISVQMLCPCTGENEIRKRTMVLFDLLKEYRWDAKAVLVLGVLAATYGGLLLPVHLAICDP 139
Query: 193 LAKTLANIHQSASLKKHLDSFKYRQVVFSSRSLIFLCLQVIKLMNQIRLFSKFDTKEIP- 252
+A ++A ++Q ++ K+R + S LI + V K I F K K+
Sbjct: 140 VAASIAKLNQLP-----IERTKFRPWLESLNLLIKAMVDVTKC---IIKFEKIPFKQAKL 199
Query: 253 ---ELASALRQIPLFTYWVIHTIVASTAEISSYLTNTEGQSQIYLNELNERLNAILNILG 312
L L I L TY V+ + + +I Y T+ QI + E+ ++
Sbjct: 200 DNNILGETLSNIYLTTYRVVKSALTCMQQI-PYFKQTQ---QISITEVQDK--------- 259
Query: 313 DYLNIFQEQLGEINLFRWLIDHIDLYPTEITLVVSKLLEGKVNAKPLINCSTLMEEKIED 372
V+ LL K +PL + +++ D
Sbjct: 260 ---------------------------------VTLLLLSKPPVEPLF----FLLQQLYD 319
Query: 373 ALREKNVILLISGLEISNDDIRALNLMYDELKREDNYKIVWIPMINSQDFDEETRKRYEL 432
N E NY+I+W+P+ +SQ + +E ++ ++
Sbjct: 320 HPSNTNT--------------------------EQNYEIIWVPIPSSQKWTDEEKEIFDF 379
Query: 433 VRSTMKWYAVQYTTKIAG--LRFLEEIWQVRE-DALMVVLDSKSKVKFSNAIHLLRVWGN 492
+++ W +V+ ++ L F ++ W ++ +A++VV+DS + NA+ ++ +WG
Sbjct: 380 YSNSLPWISVRQPWLMSSTILNFFKQEWHYKDNEAMLVVIDSNGRFVNMNAMDMVLIWGV 439
Query: 493 NAIPFTVERANALLRKN-WPESTIVKFINQPRLQSWIDQERSIIFYGGKDQNWIQRFEEK 552
A PF+V R + L +++ W + ++ I+ P + R I +G ++ +WI F
Sbjct: 440 KAYPFSVSREDELWKEHGWSINLLLDGIH-PTFEG-----REICIFGSENLDWIDEF--- 499
Query: 553 VVDIKNDRSMRDAGINFEIVPVGNNIDNNNA----------SFMSRFWITQWGFFVVKSQ 612
+ R +++ G E++ + N + A + FW+ K +
Sbjct: 500 ---VSLARKIQNLGFQLELIYLSNQRRDERAMEESSILFSPTLQQLFWLRLESIERSKLK 559
Query: 613 ---LTGSSASETTEDILRLI--SYENENGWAILTVGSAPLLVGRGNLILRVFEDFNRWKK 672
+ S E++ L+ Y GW I+ GS V G + RW +
Sbjct: 560 RIVIEPSKPDRVFEEVRNLLDFDYGKHRGWGIIGNGSTAETVD-GEKMTERMRKIVRWGE 565
Query: 673 NLNLKGFPNAFQDYFNEMALQTHQCERVTLPGFSGWIPMIVNCPEC 696
GF A + + +H +P +V C +C
Sbjct: 620 YAKGLGFTEAIEIAAEKPCELSH---TAVVPFEEALTMKVVTCEKC 565
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SS87 | 6.3e-49 | 24.60 | Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana OX=3702 GN=SEOB PE=1 S... | [more] |
Q93XX2 | 2.1e-44 | 24.45 | Protein SIEVE ELEMENT OCCLUSION A OS=Arabidopsis thaliana OX=3702 GN=SEOA PE=1 S... | [more] |
Q9FXE2 | 1.5e-21 | 21.38 | Protein SIEVE ELEMENT OCCLUSION C OS=Arabidopsis thaliana OX=3702 GN=SEOC PE=4 S... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1H6C7 | 0.0e+00 | 100.00 | protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita moschata OX=3662 GN=LOC11146... | [more] |
A0A6J1L0W4 | 0.0e+00 | 95.20 | protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita maxima OX=3661 GN=LOC1114993... | [more] |
A0A5A7UVD0 | 0.0e+00 | 80.93 | Protein SIEVE ELEMENT OCCLUSION B-like OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A1S3CNP9 | 0.0e+00 | 82.03 | protein SIEVE ELEMENT OCCLUSION B-like OS=Cucumis melo OX=3656 GN=LOC103502849 P... | [more] |
A0A0A0LNR0 | 0.0e+00 | 81.56 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G194880 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G01680.1 | 4.5e-50 | 24.60 | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640);... | [more] |
AT3G01670.1 | 1.5e-45 | 24.45 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G67790.1 | 2.2e-20 | 20.65 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |