CmoCh16G011710 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGCTGCCACGCAATATTTCTGACCGTCCGTAACTTTAACATTACCATTCTGAACCGATTCGTCGATTCTTCTTACAGCATTTGCCGGAGTTCTTCTCTCTCTACCTTTCTCTCTCATCAATCGGTTTCAAACAATGTTAAGCAAATGGTTGGCGTAGAATCCAATCCATGGTAGCCTGTCAATCTTCAACCAAAATCTAGGGTTTGTTTTTCGAAGTATTTCGTCGATTTTTCCCAATTTTGTTCTTCCCCTAATCGATCGTCATTCGTGTTGACCAATCGCAGCTTCCATCGAGATATCATTTTCCGGCTGCCGGTGGGTGGGGACTTCTGTGAGAATTTCATTTTTCTGTATTTCTCTGTGGAGATCTTCTCCGATTATTCCATTTCTGGGATTTGGTTTAGGAATGAATGTTAGGTTTTCGCGATGGGGGAGGCTAATTGTTTGTGTATAATCATGCGTTTTGGTTGAAAATTTGGGGCAAACGCGTGTAAATTGCTGGTTTGTTTATGTGTTTGAGATATTATTCGATTTTATTGTAATTGATTTTAGGGGCTTTTTATTTGAGGCTATGTATATTGAGAAATTGAAGGAAGAGGAGTTGCAGAGTGGGGAAGAGGGGAATTCAGGTATTATCGTTAGTAATTTGGAGAGCCAAAGCATTGTTAGGTCTGATGTGAAAAGGATCGTTGTTGGAGTTGGGGCTCGTGTTCTTTTCTACCCAACTTTGCTTTACAATGTTTTCAGAAATAAGCTTCAGACGGAGTTTCGATGGTGGGACAAGGTTGATGAGGTATATAGCTTTGATCTTGACAGTTCTTCCTAACCCAGATGACAAAAGAATGCATAATTATCAGAGTGCAAGTAATATGCGTTGAAAATGCCATTTGTTTCTTCAGTTCATATTGTTAGGTGCTGTTCCATTCCCTGCGGATGTTCCCTGTTTGAAGGAGGTTGGCGTTCGAGGAGTGATAACACTAAATGAGCCATATGAGACCTTGGTTCCTTCGACTCTATATCGTGTAAGTGTTGTTTTAATTTGCTTGTTCTGTACTGAATTCATTCTGTTTGATTCTTTGGAGTTGTGTTAAGTGGAGCTATGAAAGTGCTGCTTCAAACTAATTTGGGATCCTATTTGTTTGTATATAAGCATATTTATGTTCGCATTAACTTGGTGCTAATGGCTCAAGCCCACCACTAGCCGACATTGTCATCTTTGAGCTTTCTCTTTCGGGATTCCCCTGAAGGTTTGTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTATAAGAAGGCGTTTGAGAGACTTCCAATGCTGTTTTCGTACTACCTATAGGATTGCCATTATCATCCTTTCATAGTGAGTTATGGTTTTCTGTACACTTCTTTCCATGTTTGAATTTGGTCTATTTTGGAAAATTGAAGTGCAAGTATCATCTGATATGAGGTTGTTTCAGCTGACATTTAATGACCTGTTACTGTTTCTTGACTTGACTATTGTAGGTTTTCTCCCTTACCTACTTGTGCCTTTAAATTGATTTGAGAATGATTTTTGCGCTTTTACCATTGCAGGAACATGGAATTGATCATCTGACCATTCCGACTAGAGACTATTGCTTTGCACCTTTATTGAGTGACATTTGTGTTGCTGTAAATTTCATCCACAGTACGTATGTTCTGCTAAATTCTTTCTGCTTCCATCCTCAGGTTGCTTATTCCATTTTATTGCTTAATGAAAAGTTAGTAACGGCCAAGCCCACTGCTAATAGATATTGTCTTTTTTGGCTTTCCATTTCGGGATTTCCCCCAAGGTTTTTAAAACGAGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAATAATGTTTTGTTCTCCCTCTCCAACTGATGTGGGATCTCACAATCCACCCCCTTTGGGGCTCAATGTCCTTGTTGGCACTCGTTCCTCTCTCCAATCGATGTAGGATCTCACAATCCACTTCCCTTTGGGATCCAGCATCCTTGCAGGTACACCACCCGGTGTTCAGCTTTGATATCATTTGTAATAGCCTAAGCCCTCCGCTAGCAGATATTGTCTTCTTTGGGCTTTCCCTTTCAGGTTTTCTCTCAAAGTTTTTAAAACGCGTTTGCTAGGGAGAGGTTTCCCCACCCTTATAAAGAATGTTTCGTTCCCCTCTCCAACAAATGTGGGATCTCATAAAAGTAGTCTATGTTCATTAAATGATAATATGTGCAACCTTCAAGTTTATGGTGTCAAATAAACTTTTCCTTGATGAATAATTTCATTTTTTTTTTATCATATGCTGCTATCAAAGAAAATGCATCACATGGACAGACTACTTATGTTCATTGTAAAGCTGGACGCGGGCGTAGCACAACCATTGTTATTTGCTATTTGGTAAGTCTTTGTATGCAAATAAAATAACCTTTATTCTTAAATTTAAAATCAAGAAGCCTTCGCTTTTCTGAGACTTTATGGTGGTGTACAGGTGCAATACAAGCAAATGACGCCAGAAGAAGCTTATAAACATGTGAAGTCAATCAGGCCAAGGGTGCTTTTAGCACCATCACAGTGGCAGGTATTACTGCAATCCTATTTGCCTTCTTCCTTTCTCTTCCTTCTCTTTAGTTCGAAATATTACATTGTTTATATGAAAGAATTACATTCCACGTTTTGAGCTCATCTCATTGTTTCTACGGTTTGATTTCAAATACATTGATGTTATATGCTATTCATTTATTGCCCCTTTCTACCTTATAGCTTTTTACCTTTCTGGGACTTTTCATTATGATGAATTCTGCGTTTTAAGTAGTGAACTTGGTTTTCATCCTGGTTTGGACTCGATGACAATTCTTAGTACATGCACGTTGATTGATGGTTTCTATTCGCAGGCTGTCCTGGAATTCTACCGCCTGATTGTGCAGAAGGATGCTTCCTTCTGCCACATAGATGATTTTGGAAAGAAAGTATCAGAATCAGCGCATGATCTCATTGCATTTGACGATAGTTCTGTAGTTGTTGTAAAAGAATCCGATCTTGATGGATATGACGAAAGTAGCAGCCAAAGTGAAATGGGTGATATCTGGGCAGATTTAAGTGTAGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCCCTCACAAGATTCTCTTGTTTGTTGCTCAGCTATCGAGCAAAACACCATAGCCAGGAGATTAAAGGAGATGATCCAGGCGTCACGAAGGGCTGTTCACTCAGTGCTACTCATTTGGAAGGGTTCAGTGTGGACATTCATGTCTATTAAACCAACTCAGAGGTCACAACTTTTCTGAACTCGCCCCATATGTATATATATATATATATGATAAAATATAGCTAAATATGTACCAGGCAGAATTGAAATTGTTAATATATTCCTGTAAGTGAGATTGTACTGTCCAATATGTTCTCATTCTGAATGCATTAATGCATTTCTCATGTTTCATACATCGACTTTTTTCATTGAACATCGACTCGTCTCTTGGAATACATAGGGTATCTACTTTTATTTTTTCCTTAACTTTCTGGAAAATAGGCTTGCATAGTTGATGA GAGCTGCCACGCAATATTTCTGACCGTCCGTAACTTTAACATTACCATTCTGAACCGATTCGTCGATTCTTCTTACAGCATTTGCCGGAGTTCTTCTCTCTCTACCTTTCTCTCTCATCAATCGGTTTCAAACAATGTTAAGCAAATGGTTGGCGTAGAATCCAATCCATGGTAGCCTGTCAATCTTCAACCAAAATCTAGGCTTCCATCGAGATATCATTTTCCGGCTGCCGGGGCTTTTTATTTGAGGCTATGTATATTGAGAAATTGAAGGAAGAGGAGTTGCAGAGTGGGGAAGAGGGGAATTCAGGTATTATCGTTAGTAATTTGGAGAGCCAAAGCATTGTTAGGTCTGATGTGAAAAGGATCGTTGTTGGAGTTGGGGCTCGTGTTCTTTTCTACCCAACTTTGCTTTACAATGTTTTCAGAAATAAGCTTCAGACGGAGTTTCGATGGTGGGACAAGGTTGATGAGTTCATATTGTTAGGTGCTGTTCCATTCCCTGCGGATGTTCCCTGTTTGAAGGAGGTTGGCGTTCGAGGAGTGATAACACTAAATGAGCCATATGAGACCTTGGTTCCTTCGACTCTATATCGTGAACATGGAATTGATCATCTGACCATTCCGACTAGAGACTATTGCTTTGCACCTTTATTGAGTGACATTTGTGTTGCTGTAAATTTCATCCACAAAAATGCATCACATGGACAGACTACTTATGTTCATTGTAAAGCTGGACGCGGGCGTAGCACAACCATTGTTATTTGCTATTTGGTGCAATACAAGCAAATGACGCCAGAAGAAGCTTATAAACATGTGAAGTCAATCAGGCCAAGGGTGCTTTTAGCACCATCACAGTGGCAGGCTGTCCTGGAATTCTACCGCCTGATTGTGCAGAAGGATGCTTCCTTCTGCCACATAGATGATTTTGGAAAGAAAGTATCAGAATCAGCGCATGATCTCATTGCATTTGACGATAGTTCTGTAGTTGTTGTAAAAGAATCCGATCTTGATGGATATGACGAAAGTAGCAGCCAAAGTGAAATGGGTGATATCTGGGCAGATTTAAGTGTAGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCCCTCACAAGATTCTCTTGTTTGTTGCTCAGCTATCGAGCAAAACACCATAGCCAGGAGATTAAAGGAGATGATCCAGGCGTCACGAAGGGCTGTTCACTCAGTGCTACTCATTTGGAAGGGTTCAGTGTGGACATTCATGTCTATTAAACCAACTCAGAGGTCACAACTTTTCTGAACTCGCCCCATATGTATATATATATATATATGATAAAATATAGCTAAATATGTACCAGGCAGAATTGAAATTGTTAATATATTCCTGTAAGTGAGATTGTACTGTCCAATATGTTCTCATTCTGAATGCATTAATGCATTTCTCATGTTTCATACATCGACTTTTTTCATTGAACATCGACTCGTCTCTTGGAATACATAGGGTATCTACTTTTATTTTTTCCTTAACTTTCTGGAAAATAGGCTTGCATAGTTGATGA ATGTATATTGAGAAATTGAAGGAAGAGGAGTTGCAGAGTGGGGAAGAGGGGAATTCAGGTATTATCGTTAGTAATTTGGAGAGCCAAAGCATTGTTAGGTCTGATGTGAAAAGGATCGTTGTTGGAGTTGGGGCTCGTGTTCTTTTCTACCCAACTTTGCTTTACAATGTTTTCAGAAATAAGCTTCAGACGGAGTTTCGATGGTGGGACAAGGTTGATGAGTTCATATTGTTAGGTGCTGTTCCATTCCCTGCGGATGTTCCCTGTTTGAAGGAGGTTGGCGTTCGAGGAGTGATAACACTAAATGAGCCATATGAGACCTTGGTTCCTTCGACTCTATATCGTGAACATGGAATTGATCATCTGACCATTCCGACTAGAGACTATTGCTTTGCACCTTTATTGAGTGACATTTGTGTTGCTGTAAATTTCATCCACAAAAATGCATCACATGGACAGACTACTTATGTTCATTGTAAAGCTGGACGCGGGCGTAGCACAACCATTGTTATTTGCTATTTGGTGCAATACAAGCAAATGACGCCAGAAGAAGCTTATAAACATGTGAAGTCAATCAGGCCAAGGGTGCTTTTAGCACCATCACAGTGGCAGGCTGTCCTGGAATTCTACCGCCTGATTGTGCAGAAGGATGCTTCCTTCTGCCACATAGATGATTTTGGAAAGAAAGTATCAGAATCAGCGCATGATCTCATTGCATTTGACGATAGTTCTGTAGTTGTTGTAAAAGAATCCGATCTTGATGGATATGACGAAAGTAGCAGCCAAAGTGAAATGGGTGATATCTGGGCAGATTTAAGTGTAGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCCCTCACAAGATTCTCTTGTTTGTTGCTCAGCTATCGAGCAAAACACCATAGCCAGGAGATTAAAGGAGATGATCCAGGCGTCACGAAGGGCTGTTCACTCAGTGCTACTCATTTGGAAGGGTTCAGTGTGGACATTCATGTCTATTAA MYIEKLKEEELQSGEEGNSGIIVSNLESQSIVRSDVKRIVVGVGARVLFYPTLLYNVFRNKLQTEFRWWDKVDEFILLGAVPFPADVPCLKEVGVRGVITLNEPYETLVPSTLYREHGIDHLTIPTRDYCFAPLLSDICVAVNFIHKNASHGQTTYVHCKAGRGRSTTIVICYLVQYKQMTPEEAYKHVKSIRPRVLLAPSQWQAVLEFYRLIVQKDASFCHIDDFGKKVSESAHDLIAFDDSSVVVVKESDLDGYDESSSQSEMGDIWADLSVVCRVRVAGQAALTRFSCLLLSYRAKHHSQEIKGDDPGVTKGCSLSATHLEGFSVDIHVY Homology
BLAST of CmoCh16G011710 vs. ExPASy Swiss-Prot
Match: Q9ZQP1 (Phosphatidylglycerophosphate phosphatase PTPMT1 OS=Arabidopsis thaliana OX=3702 GN=PTPMT1 PE=1 SV=2) HSP 1 Score: 345.5 bits (885), Expect = 6.7e-94 Identity = 191/355 (53.80%), Postives = 242/355 (68.17%), Query Frame = 0
BLAST of CmoCh16G011710 vs. ExPASy Swiss-Prot
Match: Q6NKR2 (Phosphatidylglycerophosphate phosphatase PTPMT2 OS=Arabidopsis thaliana OX=3702 GN=PTPMT2 PE=1 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 2.8e-68 Identity = 125/209 (59.81%), Postives = 159/209 (76.08%), Query Frame = 0
BLAST of CmoCh16G011710 vs. ExPASy Swiss-Prot
Match: Q66GT5 (Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Mus musculus OX=10090 GN=Ptpmt1 PE=1 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 8.8e-30 Identity = 73/180 (40.56%), Postives = 105/180 (58.33%), Query Frame = 0
BLAST of CmoCh16G011710 vs. ExPASy Swiss-Prot
Match: P0C089 (Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ptpmt1 PE=1 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.2e-29 Identity = 74/180 (41.11%), Postives = 104/180 (57.78%), Query Frame = 0
BLAST of CmoCh16G011710 vs. ExPASy Swiss-Prot
Match: Q8WUK0 (Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Homo sapiens OX=9606 GN=PTPMT1 PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.6e-29 Identity = 74/185 (40.00%), Postives = 106/185 (57.30%), Query Frame = 0
BLAST of CmoCh16G011710 vs. ExPASy TrEMBL
Match: A0A6J1E959 (putative dual specificity protein phosphatase DSP8 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431042 PE=3 SV=1) HSP 1 Score: 676.8 bits (1745), Expect = 4.7e-191 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CmoCh16G011710 vs. ExPASy TrEMBL
Match: A0A6J1E5S7 (putative dual specificity protein phosphatase DSP8 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431042 PE=3 SV=1) HSP 1 Score: 676.8 bits (1745), Expect = 4.7e-191 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CmoCh16G011710 vs. ExPASy TrEMBL
Match: A0A6J1HMQ8 (putative dual specificity protein phosphatase DSP8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465056 PE=3 SV=1) HSP 1 Score: 664.5 bits (1713), Expect = 2.4e-187 Identity = 325/333 (97.60%), Postives = 329/333 (98.80%), Query Frame = 0
BLAST of CmoCh16G011710 vs. ExPASy TrEMBL
Match: A0A6J1HMU2 (putative dual specificity protein phosphatase DSP8 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465056 PE=3 SV=1) HSP 1 Score: 664.5 bits (1713), Expect = 2.4e-187 Identity = 325/333 (97.60%), Postives = 329/333 (98.80%), Query Frame = 0
BLAST of CmoCh16G011710 vs. ExPASy TrEMBL
Match: A0A1S3BKK7 (putative dual specificity protein phosphatase DSP8 OS=Cucumis melo OX=3656 GN=LOC103490865 PE=3 SV=1) HSP 1 Score: 609.4 bits (1570), Expect = 9.1e-171 Identity = 304/334 (91.02%), Postives = 315/334 (94.31%), Query Frame = 0
BLAST of CmoCh16G011710 vs. TAIR 10
Match: AT2G35680.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 345.5 bits (885), Expect = 4.7e-95 Identity = 191/355 (53.80%), Postives = 242/355 (68.17%), Query Frame = 0
BLAST of CmoCh16G011710 vs. TAIR 10
Match: AT5G56610.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 260.4 bits (664), Expect = 2.0e-69 Identity = 125/209 (59.81%), Postives = 159/209 (76.08%), Query Frame = 0
BLAST of CmoCh16G011710 vs. TAIR 10
Match: AT5G56610.2 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 178.7 bits (452), Expect = 7.7e-45 Identity = 97/209 (46.41%), Postives = 124/209 (59.33%), Query Frame = 0
BLAST of CmoCh16G011710 vs. TAIR 10
Match: AT3G23610.1 (dual specificity protein phosphatase 1 ) HSP 1 Score: 54.7 bits (130), Expect = 1.7e-07 Identity = 38/127 (29.92%), Postives = 62/127 (48.82%), Query Frame = 0
BLAST of CmoCh16G011710 vs. TAIR 10
Match: AT3G23610.2 (dual specificity protein phosphatase 1 ) HSP 1 Score: 54.7 bits (130), Expect = 1.7e-07 Identity = 38/127 (29.92%), Postives = 62/127 (48.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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