CmoCh16G005520 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTGAAATAAGCTGGAATGGATTTTTAATGAAGAAATTCATTTGTAATTAGTGTTATGAATTGAATTTTGTTGTCCTATCCTTGGAAACTCCATCTGGAGCGGTGATGTTTGGATTGGAAGTCTGAATGTTGGTATTAAATGCGTTTGTCTTTGTTTGGAATATTTGTTTAGGTTAGACCGCGAATTTACAATTGGTGATCTATTTCTTGTTCTCGATCTGTGATCCGTTGCGAATGCGTTTGAGTCTTGGTCTCTTGCGAAGAATTGTTGTATCATGCTCTGTCTTCATCGCTCTTACGGAAAGCTGGATACTATATTTGTTTAGAAGGCGGTAGATTAGGTAGGATGCAGAAAGGAAAGGAGGGGCAAAGTTCATCTTAGATTGAAAAATTGAATGAGTTAATTAAGATGTTAAGATTTTCTCTAATTTTTCCTATTTAATTTTCATATTAAAAGGTTAGAATGCATGATTTTGCCTTAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTCTGCTTGGGAAAGATTGTCGCTATATACTAGTTCTACAAGGACGTGATCTTATTATTTACTACGGGGCTTAGAACTGTATGGTTTGTTAATAGAGAAGTTGCATTGATTCGAATATTCAATTTTTTTTCCCATTTCTATTCGATATTAGATTTCTTCATATCCGTAACAAGTTATGATGAATATGACTGTTTGTCAATTTCACAGTTGTAATTATAAAGCTGATAAGCCATGGGGGGTGGAAAAGATAAACATGACGAATCTGACAAAGGTTTATTCTCGCATCTGGCTCATGGTGTTGCTCATGGAGGTGGATATCCTCATCCTGGAGGATATCCCCCACCTGGAGGGTATCCCCCACCCGGAGGTTATCCTCCCCCTGGAGGTTATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCAGGACATGGCTACCCCCCGGCTGGCTATCCTCCGGGTGCTTATCCTCCTGGTGCATATCCTGGACCCTCTGCTCCACATCATTCAGGTATTAATCCAATTTACATACATCAGTAGGAAGAGTTATTAGATCATTAGTTTAGTCAAGTTGTTATTTAGTTAATTTCTTCTATTAATTTGTCAATTAGTCTGCAGGGATTAATAGTAATTTCAATTATTTTGTTAAGGCTATCTATATCCACTTTTAGATTGTAATAGAAGGATTTTTAAACGTTTCGTTACGGAAATTGTTATGCTTTCCCTCCATTGAGATTTAACTCGTGTTCTTGGTATCGATTTTCACCCCACTATGGCTTTCAATACAATCTAACGAATCCCACTGTGTCATCATGTATCAGAATTGTTTTGAAGCATTCGGGTGTAACTTGCTAAAAATTTTAAGTGAAATTGTTCTATTCCGAATTACAATCACCCATTGAAAAAAAAATTCTTTCAAGTAAATCAACCCAGGAAGATTGGGGATCCTGGTTACGGTTTGATTGCAGATTTTTATAAAGGTGCTGATTCCAAGTATTCTTAAATTCAGGGCACGGTGTAGCAGGAATGCTCGCTGGTGGTGCTGCCGCTGCAGCAGCTGCATACGGAGTTCATCATGTCGCCCATGGTGCTGGTCACTACCCCCACGGCGTTGCTCATTATGGTCATCATGGTGGAAAATTCAAGCACGGCAAGCACGGCAAGTTCAAGCATGGGAAGTTCGGGAAGCACAAACATGGGAAGCACGGCATGTTTGGTGGTGGCAAATTCAAGAAGTGGAAGTGATTTTTCTGCCATCCCTTTTCACCGAGCCTTCTTCTTCAGTCGCTTTCAAGAACGGTCTCGGTATAGAGTGTGGGGTATCATCTTCTTCTCTAATCTCTATAATGTCTTAAAACAATGAATTATTACGTATTTACTCTTATTATCTTAACTACTGTTTGTGGCTTCTGTACTCTTCCTGCCTGTTGCTGGACATCAATAATCTGGATCTTTCCAGTTTCCAGTTTCTACTTTCCACCTTAGTTTATTTTTATTGTGAATTCTTTTGTGCCCGATCTCCAGATCATAGAGGGAGTTTTCCCATTAGTCATGGATATACTTGCTTGGTAGAGGGAGTTTTCCCATTAGTCAGGGATATACTTGCTTGTATCCGGATTCATCAGGGGAGAAATTTTGTCAACCCTAATTTAAAAGGGTAGTCCAATTACTCTTCAGATGGGATAAGCATTTATTATTTGATTAAAAGGAAGCAATGAGCACAGCCGAA GATTGAAATAAGCTGGAATGGATTTTTAATGAAGAAATTCATTTGTAATTAGTGTTATGAATTGAATTTTGTTGTCCTATCCTTGGAAACTCCATCTGGAGCGGTGATGTTTGGATTGGAAGTCTGAATGTTGGTATTAAATGCGTTTGTCTTTGTTTGGAATATTTGTTTAGGTTAGACCGCGAATTTACAATTGGTGATCTATTTCTTGTTCTCGATCTGTGATCCGTTGCGAATGCGTTTGAGTCTTGGTCTCTTGCGAAGAATTGTTGTATCATGCTCTGTCTTCATCGCTCTTACGGAAAGCTGGATACTATATTTGTTTAGAAGGCGGTAGATTAGTTGTAATTATAAAGCTGATAAGCCATGGGGGGTGGAAAAGATAAACATGACGAATCTGACAAAGGTTTATTCTCGCATCTGGCTCATGGTGTTGCTCATGGAGGTGGATATCCTCATCCTGGAGGATATCCCCCACCTGGAGGGTATCCCCCACCCGGAGGTTATCCTCCCCCTGGAGGTTATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCAGGACATGGCTACCCCCCGGCTGGCTATCCTCCGGGTGCTTATCCTCCTGGTGCATATCCTGGACCCTCTGCTCCACATCATTCAGGGCACGGTGTAGCAGGAATGCTCGCTGGTGGTGCTGCCGCTGCAGCAGCTGCATACGGAGTTCATCATGTCGCCCATGGTGCTGGTCACTACCCCCACGGCGTTGCTCATTATGGTCATCATGGTGGAAAATTCAAGCACGGCAAGCACGGCAAGTTCAAGCATGGGAAGTTCGGGAAGCACAAACATGGGAAGCACGGCATGTTTGGTGGTGGCAAATTCAAGAAGTGGAAGTGATTTTTCTGCCATCCCTTTTCACCGAGCCTTCTTCTTCAGTCGCTTTCAAGAACGGTCTCGGTATAGAGTGTGGGGTATCATCTTCTTCTCTAATCTCTATAATGTCTTAAAACAATGAATTATTACGTATTTACTCTTATTATCTTAACTACTGTTTGTGGCTTCTGTACTCTTCCTGCCTGTTGCTGGACATCAATAATCTGGATCTTTCCAGTTTCCAGTTTCTACTTTCCACCTTAGTTTATTTTTATTGTGAATTCTTTTGTGCCCGATCTCCAGATCATAGAGGGAGTTTTCCCATTAGTCATGGATATACTTGCTTGGTAGAGGGAGTTTTCCCATTAGTCAGGGATATACTTGCTTGTATCCGGATTCATCAGGGGAGAAATTTTGTCAACCCTAATTTAAAAGGGTAGTCCAATTACTCTTCAGATGGGATAAGCATTTATTATTTGATTAAAAGGAAGCAATGAGCACAGCCGAA ATGGGGGGTGGAAAAGATAAACATGACGAATCTGACAAAGGTTTATTCTCGCATCTGGCTCATGGTGTTGCTCATGGAGGTGGATATCCTCATCCTGGAGGATATCCCCCACCTGGAGGGTATCCCCCACCCGGAGGTTATCCTCCCCCTGGAGGTTATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCAGGACATGGCTACCCCCCGGCTGGCTATCCTCCGGGTGCTTATCCTCCTGGTGCATATCCTGGACCCTCTGCTCCACATCATTCAGGGCACGGTGTAGCAGGAATGCTCGCTGGTGGTGCTGCCGCTGCAGCAGCTGCATACGGAGTTCATCATGTCGCCCATGGTGCTGGTCACTACCCCCACGGCGTTGCTCATTATGGTCATCATGGTGGAAAATTCAAGCACGGCAAGCACGGCAAGTTCAAGCATGGGAAGTTCGGGAAGCACAAACATGGGAAGCACGGCATGTTTGGTGGTGGCAAATTCAAGAAGTGGAAGTGA MGGGKDKHDESDKGLFSHLAHGVAHGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGYPPQGYPPGHGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGVHHVAHGAGHYPHGVAHYGHHGGKFKHGKHGKFKHGKFGKHKHGKHGMFGGGKFKKWK Homology
BLAST of CmoCh16G005520 vs. ExPASy Swiss-Prot
Match: P37705 (Glycine-rich protein A3 OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 8.1e-27 Identity = 95/163 (58.28%), Postives = 102/163 (62.58%), Query Frame = 0
BLAST of CmoCh16G005520 vs. ExPASy Swiss-Prot
Match: P24639 (Annexin A7 OS=Dictyostelium discoideum OX=44689 GN=nxnA PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.9e-08 Identity = 42/71 (59.15%), Postives = 44/71 (61.97%), Query Frame = 0
BLAST of CmoCh16G005520 vs. ExPASy Swiss-Prot
Match: O16005 (Rhodopsin OS=Sepia officinalis OX=6610 GN=RHO PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.9e-08 Identity = 41/59 (69.49%), Postives = 42/59 (71.19%), Query Frame = 0
BLAST of CmoCh16G005520 vs. ExPASy Swiss-Prot
Match: P09241 (Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 3.9e-05 Identity = 42/89 (47.19%), Postives = 47/89 (52.81%), Query Frame = 0
BLAST of CmoCh16G005520 vs. ExPASy TrEMBL
Match: A0A6J1ETR5 (glycine-rich protein A3-like OS=Cucurbita moschata OX=3662 GN=LOC111437642 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CmoCh16G005520 vs. ExPASy TrEMBL
Match: A0A6J1J3I6 (glycine-rich protein A3-like OS=Cucurbita maxima OX=3661 GN=LOC111483065 PE=4 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 1.2e-89 Identity = 170/172 (98.84%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of CmoCh16G005520 vs. ExPASy TrEMBL
Match: A0A5A7TDL9 (Glycine-rich protein A3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002540 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 4.8e-75 Identity = 158/173 (91.33%), Postives = 158/173 (91.33%), Query Frame = 0
BLAST of CmoCh16G005520 vs. ExPASy TrEMBL
Match: A0A1S3BRX9 (glycine-rich protein A3-like OS=Cucumis melo OX=3656 GN=LOC103493032 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 4.8e-75 Identity = 158/173 (91.33%), Postives = 158/173 (91.33%), Query Frame = 0
BLAST of CmoCh16G005520 vs. ExPASy TrEMBL
Match: A0A0A0KV55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056610 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 5.4e-74 Identity = 159/181 (87.85%), Postives = 160/181 (88.40%), Query Frame = 0
BLAST of CmoCh16G005520 vs. TAIR 10
Match: AT4G19200.1 (proline-rich family protein ) HSP 1 Score: 147.5 bits (371), Expect = 9.8e-36 Identity = 119/191 (62.30%), Postives = 124/191 (64.92%), Query Frame = 0
BLAST of CmoCh16G005520 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein ) HSP 1 Score: 129.4 bits (324), Expect = 2.7e-30 Identity = 111/195 (56.92%), Postives = 119/195 (61.03%), Query Frame = 0
BLAST of CmoCh16G005520 vs. TAIR 10
Match: AT5G45350.2 (proline-rich family protein ) HSP 1 Score: 129.4 bits (324), Expect = 2.7e-30 Identity = 111/195 (56.92%), Postives = 119/195 (61.03%), Query Frame = 0
BLAST of CmoCh16G005520 vs. TAIR 10
Match: AT1G31750.1 (proline-rich family protein ) HSP 1 Score: 127.1 bits (318), Expect = 1.4e-29 Identity = 104/188 (55.32%), Postives = 110/188 (58.51%), Query Frame = 0
BLAST of CmoCh16G005520 vs. TAIR 10
Match: AT5G17650.1 (glycine/proline-rich protein ) HSP 1 Score: 114.0 bits (284), Expect = 1.2e-25 Identity = 97/184 (52.72%), Postives = 107/184 (58.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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